gmap binary package in Ubuntu Oracular amd64
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
Publishing history
| Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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| 2024-07-14 22:08:59 UTC | Published | Ubuntu Oracular amd64 | release | universe | science | Optional | 2024-06-24+ds-1 | ||
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| Deleted | Ubuntu Oracular amd64 | proposed | universe | science | Optional | 2024-06-24+ds-1 | |||
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| 2024-07-14 22:09:25 UTC | Superseded | Ubuntu Oracular amd64 | release | universe | science | Optional | 2024-05-20+ds-1 | ||
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| 2024-07-16 00:10:19 UTC | Deleted | Ubuntu Oracular amd64 | proposed | universe | science | Optional | 2024-05-20+ds-1 | ||
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| 2024-05-28 12:51:11 UTC | Superseded | Ubuntu Oracular amd64 | release | universe | science | Optional | 2024-02-22+ds-1build1 | ||
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