Change logs for theseus source package in Oneiric

theseus (1.6.1-1) unstable; urgency=low

  * New upstream version
  * debian/patches:
    - 99-theseus_align.sh.patch:
      Replaced by sed script in debian/rules which works (hopefully)
      for future versions as well without manually changing the patch
    - use_muscle_instead_of_clustalw.patch:
      Removed because clustalw is no in main and we do not need
      to actively replace it by muscle
    - 00-makefile.patch:
      Removed because applied upstream
    - 200-make.inc.patch:
      Removed
      + One purpose was to replace not working libtool call by ar
        which was applied upstream
      + Other purpose was to enable liblapack (patch by Morten
        Kjeldgaard) which was discussed with upstream and seems to
        cause problems.  So it was deactivated for now and might be
        tested later for enabling higher performance if needed.
 -- Ubuntu Archive Auto-Sync <email address hidden>   Sat,  30 Apr 2011 13:51:34 +0000

theseus (1.5.5-1) unstable; urgency=low

  * New upstream version
  * Standards-Version: 3.9.1 (no changes needed)
  * Adapt debian/patches to new upstream version
  * Source format 3.0 (quilt)
  * debian/patches/use_muscle_instead_of_clustalw.patch:
    The script thesaus_align says it would use muscle as align program
    but it actually uses clustalw which is in non-free and thus we can
    not recommend it.  The patch makes muscle really the default
  * Depends: muscle (instead of Suggests)
  * debian/theseus_align.1: Better wording for muscle preference
 -- Ubuntu Archive Auto-Sync <email address hidden>   Thu,  25 Nov 2010 12:54:38 +0000