Binary package “spoa” in ubuntu focal
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/
is used to generate consensus sequences (as described in
10.1093/
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).