Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: DSSP
Upstream-Contact: Maarten L. Hekkelman
Source: http://www.cmbi.ru.nl/dssp/
Files: *
Copyright: © 2009-2012, Maarten L. Hekkelman
License: Boost-1.0
Files: debian/*
Copyright: © 2012, Maarten L. Hekkelman
License: Boost-1.0
Files: debian/examples/5bmg.pdb
Copyright: © 2016, Cunningham, T.F., Pornsuwan, S., Horne, W.S., Saxena, S.
License: PDB
Comment: full protein structure in PDB format from RCSB PDB database
PDB ID: 5bmg, available at: http://www.rcsb.org
Files: debian/examples/2OSL_fragment.pdb
Copyright: © 2007, Du, J., Wang, H., Zhong, C., Peng, B., Zhang, M., Li, B.,
Huo, S., Guo, Y., Ding, J.
License: PDB
Comment: a fragment of protein structure from RCSB PDB database.
PDB ID: 2osl, available at: http://www.rcsb.org
.
Contains only a small portion of corresponding file (with PDB ID "2osl") -
PDB file's "ATOM" section information about first 4 aminoacid atoms for each
of 2 different chains (namely, 'L' and 'H' chains).
.
Fragmented PDB sample is used for package testing purposes - it shows that
algorithm needs only specific .pdb file portion (atom coordinates from "ATOM"
section) for processing and obtaining some results (while with this short
fragment these results can be almost meaningless because chain fragments are
too short).
.
Can be replaced by any other PDB file or PDB file fragment with atom
coordinates.
License: Boost-1.0
Boost Software License - Version 1.0 - August 17th, 2003
.
Permission is hereby granted, free of charge, to any person or organization
obtaining a copy of the software and accompanying documentation covered by
this license (the "Software") to use, reproduce, display, distribute,
execute, and transmit the Software, and to prepare derivative works of the
Software, and to permit third-parties to whom the Software is furnished to
do so, all subject to the following:
.
The copyright notices in the Software and this entire statement, including
the above license grant, this restriction and the following disclaimer,
must be included in all copies of the Software, in whole or in part, and
all derivative works of the Software, unless such copies or derivative
works are solely in the form of machine-executable object code generated by
a source language processor.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
DEALINGS IN THE SOFTWARE.
License: PDB
PDB File License - as described in RCSB PDB site - June 17, 2016
.
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all
copyright restrictions and made fully and freely available for both
non-commercial and commercial use. Users of the data should attribute the
original authors of that structural data. By using the materials available in
the PDB archive, the user agrees to abide by the conditions described in the
PDB Advisory Notice (http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/pdb_advisory.html).
.
License's text is available on RCSB PDB database site (http://www.rcsb.org), on page named
"RCSB PDB Policies & References".
URL: http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/policies_references.html