Ubuntu
spaln package

spaln 2.4.13f+dfsg-1 source package in Ubuntu

Changelog

spaln (2.4.13f+dfsg-1) unstable; urgency=medium

  * Team upload.
  * Ignore i386 in Salsa CI
  * Add CPPFLAGS for hardening

 -- Andreas Tille <email address hidden>  Sun, 05 Feb 2023 21:42:42 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 mips64el ppc64el s390x alpha ia64 kfreebsd-amd64 ppc64 riscv64 sparc64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
spaln_2.4.13f+dfsg-1.dsc 2.2 KiB f2cdb305638b2bd22ee22e47498a3109a733238dfb8dae8450910ce50f3dcc7f
spaln_2.4.13f+dfsg.orig.tar.xz 18.8 MiB 68fa7af1b32e9deee7a73d7e18a8772903f2668684c521cbed4201c509adeeb6
spaln_2.4.13f+dfsg-1.debian.tar.xz 13.3 KiB 8a06b3c82424874c50192392214a42144ebe55407bd94946b87fd5138b3d47e6

Available diffs

No changes file available.

Binary packages built by this source

spaln: splicing-aware transcript-alignment to genomic DNA

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.

spaln-data: splicing-aware transcript-alignment to genomic DNA (data)

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.
 .
 This package contains the architecture independent data files.

spaln-dbgsym: debug symbols for spaln