Ubuntu
spaln package

spaln 2.4.13e+dfsg-1 source package in Ubuntu

Changelog

spaln (2.4.13e+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
    Closes: #1026576
  * Fix watch file
  * Standards-Version: 4.6.2 (routine-update)

 -- Andreas Tille <email address hidden>  Tue, 10 Jan 2023 13:50:42 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 mips64el ppc64el s390x alpha ia64 kfreebsd-amd64 ppc64 riscv64 sparc64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
spaln_2.4.13e+dfsg-1.dsc 2.2 KiB 29937025d00a313883809faf9f91bda2f9260eb297d714037c82237f27340501
spaln_2.4.13e+dfsg.orig.tar.xz 18.8 MiB c242d4bbf4195352526bf2c15f73197ad5b0f68625c2be0aa74dcab05d29688b
spaln_2.4.13e+dfsg-1.debian.tar.xz 13.2 KiB 5dfd41b8fb54810f9c241b881f7c61d3bd3bad48f9b9369a4cbb46133618a4c4

Available diffs

No changes file available.

Binary packages built by this source

spaln: splicing-aware transcript-alignment to genomic DNA

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.

spaln-data: splicing-aware transcript-alignment to genomic DNA (data)

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.
 .
 This package contains the architecture independent data files.

spaln-dbgsym: debug symbols for spaln