python-biopython 1.75+dfsg-2 source package in Ubuntu
Changelog
python-biopython (1.75+dfsg-2) unstable; urgency=medium
[ Michael R. Crusoe ]
* Team upload.
* Skip PDB_ResidueDepth test, as http://mgltools.scripps.edu/packages/MSMS
is not yet packaged for Debian
* Skip test_mmtf{,_online} as https://github.com/rcsb/mmtf-python is not yet
packaged for Debian
* Added missing test dependencies: python-unittest2, python{,3}-networkx,
samtools
* i386: build-dep on raxml for testing purposes
* debian/patches/arm64.patch from upstream to fix the PairwiseAligner
* debian/patches/fix_doctest: from me to fix the Bio.Cluster._cluster doctests
Now the tests are required to pass again.
[ Andreas Tille ]
* Drop Python2 package
Closes: #937606
-- Michael R. Crusoe <email address hidden> Sun, 15 Dec 2019 14:38:14 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- python
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| python-biopython_1.75+dfsg-2.dsc | 2.7 KiB | 5a974810add718f1d6cd9225eac3cd24ebaaa888a8f2f8fdab5cb8360c914dd9 |
| python-biopython_1.75+dfsg.orig.tar.xz | 9.3 MiB | 6029b38ec186b9b11447a001f068d6ee3e3fe9dbc2f7f08bb64d97e3ed6d4a80 |
| python-biopython_1.75+dfsg-2.debian.tar.xz | 15.4 KiB | 47bb622f0cb8508d24529a56e434e29bfb86cc3250dcd7f72e1e9d7524d65125 |
Available diffs
- diff from 1.75+dfsg-1 to 1.75+dfsg-2 (6.8 KiB)
No changes file available.
Binary packages built by this source
- python-biopython-doc: Documentation for the Biopython library
Documentation and examples about how to use the Biopython
library.
.
This package also contains the unit tests of the test suite
to enable reproducing the test results.
- python3-biopython: Python3 library for bioinformatics
The Biopython Project is an international association
of developers of freely available Python tools for
computational molecular biology.
.
It is a distributed collaborative effort to develop Python3
libraries and applications which address the needs of
current and future work in bioinformatics. The source code
is made available under the Biopython License, which is
extremely liberal and compatible with almost every license in
the world. The project works along with the Open Bioinformatics
Foundation, who generously provide web and CVS space for
the project.
- python3-biopython-dbgsym: debug symbols for python3-biopython
- python3-biopython-sql: Biopython support for the BioSQL database schema (Python 3)
This is the Biopython interface to a BioSQL database (see www.biosql.org
for details). BioPerl, BioJava and BioRuby also provide their own BioSQL
interfaces onto the same shared SQL schema.
