https://launchpad.net/ubuntu/+source/python-biopython/1.73+dfsg-1ubuntu1/+build/16447224 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-030 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:45 UTC 2019 x86_64 Buildd toolchain package versions: launchpad-buildd_167 python-lpbuildd_167 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 4 Mar 19:45:51 ntpdate[1821]: adjust time server 10.211.37.1 offset -0.029847 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-16447224 --image-type chroot /home/buildd/filecache-default/1b8bd95dfc080fb8062b439d66609df4d6cce84f Creating target for build PACKAGEBUILD-16447224 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-16447224 Starting target for build PACKAGEBUILD-16447224 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-16447224 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16447224 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-16447224 Updating target for build PACKAGEBUILD-16447224 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main i386 Packages [978 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe i386 Packages [9058 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5259 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main i386 Packages [118 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [48.1 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 Packages [557 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [146 kB] Fetched 17.1 MB in 5s (3217 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: gcc-9-base libreadline8 The following packages will be upgraded: adduser apt base-passwd bash binutils binutils-common binutils-i686-linux-gnu bsdutils build-essential ca-certificates coreutils cpp cpp-8 dash debconf debianutils diffutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++ g++-8 gcc gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libattr1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libjson-c3 liblz4-1 liblzma5 libmount1 libmpfr6 libmpx2 libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libperl5.28 libpng16-16 libprocps7 libquadmath0 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.28 pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux xz-utils zlib1g 126 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 76.4 MB of archives. After this operation, 8957 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main i386 debianutils i386 4.8.6.1 [85.9 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main i386 bash i386 5.0-2ubuntu1 [677 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main i386 bsdutils i386 1:2.33.1-0.1ubuntu2 [66.0 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main i386 coreutils i386 8.30-1ubuntu1 [1316 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main i386 tar i386 1.30+dfsg-5 [265 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main i386 dpkg i386 1.19.5ubuntu1 [1149 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main i386 libperl5.28 i386 5.28.1-4 [3445 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main i386 perl i386 5.28.1-4 [204 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main i386 perl-base i386 5.28.1-4 [1602 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main i386 perl-modules-5.28 all 5.28.1-4 [2811 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libc-dev-bin i386 2.29-0ubuntu1 [71.5 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libc6-dev i386 2.29-0ubuntu1 [2324 kB] Get:13 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libc6 i386 2.29-0ubuntu1 [2542 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libc-bin i386 2.29-0ubuntu1 [595 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main i386 linux-libc-dev i386 4.19.0-13.14 [1075 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main i386 gcc-9-base i386 9-20190227-0ubuntu1 [17.0 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgcc1 i386 1:9-20190227-0ubuntu1 [47.9 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main i386 libdb5.3 i386 5.3.28+dfsg1-0.3 [737 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main i386 libgdbm6 i386 1.18.1-3 [32.0 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main i386 libgdbm-compat4 i386 1.18.1-3 [6712 B] Get:21 http://ftpmaster.internal/ubuntu disco/main i386 zlib1g i386 1:1.2.11.dfsg-1ubuntu2 [55.9 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main i386 debconf all 1.5.71 [122 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main i386 dash i386 0.5.10.2-4ubuntu1 [90.8 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main i386 diffutils i386 1:3.7-2 [208 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main i386 findutils i386 4.6.0+git+20190209-2 [343 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main i386 grep i386 3.3-1 [155 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main i386 gzip i386 1.9-3 [94.8 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libsmartcols1 i386 2.33.1-0.1ubuntu2 [98.6 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libuuid1 i386 2.33.1-0.1ubuntu2 [21.9 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libblkid1 i386 2.33.1-0.1ubuntu2 [147 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libfdisk1 i386 2.33.1-0.1ubuntu2 [190 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libmount1 i386 2.33.1-0.1ubuntu2 [158 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main i386 libncurses6 i386 6.1+20181013-2ubuntu2 [108 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main i386 libtinfo6 i386 6.1+20181013-2ubuntu2 [84.8 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main i386 libncursesw6 i386 6.1+20181013-2ubuntu2 [142 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main i386 fdisk i386 2.33.1-0.1ubuntu2 [127 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main i386 login i386 1:4.5-1.1ubuntu1 [266 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main i386 util-linux i386 2.33.1-0.1ubuntu2 [1026 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main i386 ncurses-bin i386 6.1+20181013-2ubuntu2 [166 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main i386 sed i386 4.7-1 [193 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main i386 libdebconfclient0 i386 0.247ubuntu1 [6504 B] Get:42 http://ftpmaster.internal/ubuntu disco/main i386 base-passwd i386 3.5.46 [47.9 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main i386 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main i386 ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main i386 libnettle6 i386 3.4.1-1 [128 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main i386 libhogweed4 i386 3.4.1-1 [142 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main i386 libp11-kit0 i386 0.23.15-2 [185 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main i386 libgnutls30 i386 3.6.5-2ubuntu1 [770 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main i386 liblz4-1 i386 1.8.3-1ubuntu1 [61.2 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main i386 liblzma5 i386 5.2.4-1 [99.7 kB] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libstdc++6 i386 9-20190227-0ubuntu1 [547 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main i386 libudev1 i386 240-6ubuntu1 [72.6 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main i386 libzstd1 i386 1.3.8+dfsg-3 [225 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main i386 libapt-pkg5.0 i386 1.8.0~rc4 [897 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main i386 libpam0g i386 1.3.1-5ubuntu1 [58.6 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main i386 libsemanage-common all 2.8-2 [7016 B] Get:57 http://ftpmaster.internal/ubuntu disco/main i386 libsemanage1 i386 2.8-2 [94.2 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main i386 libpam-modules-bin i386 1.3.1-5ubuntu1 [39.1 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main i386 libpam-modules i386 1.3.1-5ubuntu1 [262 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main i386 passwd i386 1:4.5-1.1ubuntu1 [817 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main i386 adduser all 3.118ubuntu1 [163 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main i386 libgpg-error0 i386 1.35-1 [62.3 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main i386 gpgv i386 2.2.12-1ubuntu3 [217 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main i386 apt i386 1.8.0~rc4 [1239 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main i386 systemd-sysv i386 240-6ubuntu1 [9380 B] Get:66 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libacl1 i386 2.2.53-4 [19.9 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main i386 libcap2 i386 1:2.25-2 [13.7 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main i386 libargon2-1 i386 0~20171227-0.2 [23.5 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main i386 libjson-c3 i386 0.12.1+ds-2 [24.0 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libssl1.1 i386 1.1.1b-1ubuntu1 [1299 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main i386 libcryptsetup12 i386 2:2.1.0-1ubuntu1 [166 kB] Get:72 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libip4tc0 i386 1.8.2-3ubuntu1 [21.5 kB] Get:73 http://ftpmaster.internal/ubuntu disco-proposed/main i386 mount i386 2.33.1-0.1ubuntu2 [117 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main i386 systemd i386 240-6ubuntu1 [3468 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main i386 libsystemd0 i386 240-6ubuntu1 [267 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main i386 libext2fs2 i386 1.44.5-1 [186 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main i386 e2fsprogs i386 1.44.5-1 [550 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main i386 init i386 1.56+nmu1 [6076 B] Get:79 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libattr1 i386 1:2.4.48-4 [12.8 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main i386 libcap-ng0 i386 0.7.9-2 [11.1 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main i386 libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB] Get:82 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libubsan1 i386 9-20190227-0ubuntu1 [148 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main i386 libmpfr6 i386 4.0.2-1 [246 kB] Get:84 http://ftpmaster.internal/ubuntu disco-proposed/main i386 g++-8 i386 8.3.0-2ubuntu1 [10.1 MB] Get:85 http://ftpmaster.internal/ubuntu disco-proposed/main i386 gcc-8 i386 8.3.0-2ubuntu1 [9846 kB] Get:86 http://ftpmaster.internal/ubuntu disco-proposed/main i386 cpp-8 i386 8.3.0-2ubuntu1 [8974 kB] Get:87 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libcc1-0 i386 9-20190227-0ubuntu1 [49.3 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main i386 binutils-i686-linux-gnu i386 2.32-4ubuntu1 [2010 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main i386 libbinutils i386 2.32-4ubuntu1 [505 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main i386 binutils i386 2.32-4ubuntu1 [3392 B] Get:91 http://ftpmaster.internal/ubuntu disco/main i386 binutils-common i386 2.32-4ubuntu1 [200 kB] Get:92 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgomp1 i386 9-20190227-0ubuntu1 [94.4 kB] Get:93 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disco/main i386 libprocps7 i386 2:3.3.15-2ubuntu2 [33.8 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main i386 libss2 i386 1.44.5-1 [11.6 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main i386 lsb-base all 10.2018112800ubuntu1 [12.6 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main i386 procps i386 2:3.3.15-2ubuntu2 [229 kB] Get:106 http://ftpmaster.internal/ubuntu disco-proposed/main i386 openssl i386 1.1.1b-1ubuntu1 [630 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main i386 ca-certificates all 20190110 [146 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main i386 readline-common all 8.0-1 [53.4 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main i386 libreadline8 i386 8.0-1 [133 kB] Get:110 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libsqlite3-0 i386 3.27.2-1 [569 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main i386 tzdata all 2018i-2 [187 kB] Get:112 http://ftpmaster.internal/ubuntu disco/main i386 xz-utils i386 5.2.4-1 [87.0 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main i386 libpng16-16 i386 1.6.36-5 [187 kB] Get:114 http://ftpmaster.internal/ubuntu disco-proposed/main i386 multiarch-support i386 2.29-0ubuntu1 [6916 B] Get:115 http://ftpmaster.internal/ubuntu disco-proposed/main i386 g++ i386 4:8.3.0-1ubuntu1 [1612 B] Get:116 http://ftpmaster.internal/ubuntu disco-proposed/main i386 gcc i386 4:8.3.0-1ubuntu1 [5264 B] Get:117 http://ftpmaster.internal/ubuntu disco-proposed/main i386 cpp i386 4:8.3.0-1ubuntu1 [27.6 kB] Get:118 http://ftpmaster.internal/ubuntu disco-proposed/main i386 dpkg-dev all 1.19.5ubuntu1 [666 kB] Get:119 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libdpkg-perl all 1.19.5ubuntu1 [230 kB] Get:120 http://ftpmaster.internal/ubuntu disco-proposed/main i386 build-essential i386 12.6ubuntu1 [4660 B] Get:121 http://ftpmaster.internal/ubuntu disco/main i386 e2fslibs i386 1.44.5-1 [2704 B] Get:122 http://ftpmaster.internal/ubuntu disco/main i386 libassuan0 i386 2.5.2-1 [37.4 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main i386 gpg i386 2.2.12-1ubuntu3 [514 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main i386 gpgconf i386 2.2.12-1ubuntu3 [130 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main i386 gpg-agent i386 2.2.12-1ubuntu3 [249 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main i386 libcomerr2 i386 1.44.5-1 [2700 B] Get:127 http://ftpmaster.internal/ubuntu disco/main i386 optipng i386 0.7.7-1 [88.1 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main i386 pkgbinarymangler all 144 [55.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 76.4 MB in 2s (48.6 MB/s) (Reading database ... 12659 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_i386.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12659 files and directories currently installed.) Preparing to unpack .../bash_5.0-2ubuntu1_i386.deb ... Unpacking bash (5.0-2ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-2ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12659 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu2_i386.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu2) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu2) ... (Reading database ... 12659 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_i386.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... 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Preparing to unpack .../46-pkgbinarymangler_144_all.deb ... Unpacking pkgbinarymangler (144) over (143) ... Setting up perl-modules-5.28 (5.28.1-4) ... Setting up lsb-base (10.2018112800ubuntu1) ... Setting up e2fslibs:i386 (1.44.5-1) ... Setting up init (1.56+nmu1) ... Setting up libprocps7:i386 (2:3.3.15-2ubuntu2) ... Setting up libsqlite3-0:i386 (3.27.2-1) ... Setting up binutils-common:i386 (2.32-4ubuntu1) ... Setting up linux-libc-dev:i386 (4.19.0-13.14) ... Setting up libcom-err2:i386 (1.44.5-1) ... Setting up libassuan0:i386 (2.5.2-1) ... Setting up libgomp1:i386 (9-20190227-0ubuntu1) ... Setting up tzdata (2018i-2) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Mar 4 19:46:39 UTC 2019. Universal Time is now: Mon Mar 4 19:46:39 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libasan5:i386 (9-20190227-0ubuntu1) ... Setting up multiarch-support (2.29-0ubuntu1) ... Setting up libmpfr6:i386 (4.0.2-1) ... Setting up libncurses6:i386 (6.1+20181013-2ubuntu2) ... Setting up xz-utils (5.2.4-1) ... Setting up libquadmath0:i386 (9-20190227-0ubuntu1) ... Setting up libpng16-16:i386 (1.6.36-5) ... Setting up libatomic1:i386 (9-20190227-0ubuntu1) ... Setting up libss2:i386 (1.44.5-1) ... Setting up gcc-8-base:i386 (8.3.0-2ubuntu1) ... Setting up libmpx2:i386 (8.3.0-2ubuntu1) ... Setting up libubsan1:i386 (9-20190227-0ubuntu1) ... Setting up libcomerr2:i386 (1.44.5-1) ... Setting up procps (2:3.3.15-2ubuntu2) ... Installing new version of config file /etc/sysctl.d/10-network-security.conf ... Setting up libbinutils:i386 (2.32-4ubuntu1) ... Setting up cpp-8 (8.3.0-2ubuntu1) ... Setting up libc-dev-bin (2.29-0ubuntu1) ... Setting up openssl (1.1.1b-1ubuntu1) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up readline-common (8.0-1) ... Setting up libcc1-0:i386 (9-20190227-0ubuntu1) ... Setting up libitm1:i386 (9-20190227-0ubuntu1) ... Setting up libgdbm6:i386 (1.18.1-3) ... Setting up binutils-i686-linux-gnu (2.32-4ubuntu1) ... Setting up libreadline8:i386 (8.0-1) ... Setting up e2fsprogs (1.44.5-1) ... Setting up binutils (2.32-4ubuntu1) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 2 added, 7 removed; done. Setting up optipng (0.7.7-1) ... Setting up libgdbm-compat4:i386 (1.18.1-3) ... Setting up libgcc-8-dev:i386 (8.3.0-2ubuntu1) ... Setting up libperl5.28:i386 (5.28.1-4) ... Setting up cpp (4:8.3.0-1ubuntu1) ... Setting up gpgconf (2.2.12-1ubuntu3) ... Setting up libc6-dev:i386 (2.29-0ubuntu1) ... Setting up gpg (2.2.12-1ubuntu3) ... Setting up libstdc++-8-dev:i386 (8.3.0-2ubuntu1) ... Setting up gcc-8 (8.3.0-2ubuntu1) ... Setting up gpg-agent (2.2.12-1ubuntu3) ... Setting up pkgbinarymangler (144) ... Setting up gcc (4:8.3.0-1ubuntu1) ... Setting up perl (5.28.1-4) ... Setting up libdpkg-perl (1.19.5ubuntu1) ... Setting up g++-8 (8.3.0-2ubuntu1) ... Setting up dpkg-dev (1.19.5ubuntu1) ... Setting up g++ (4:8.3.0-1ubuntu1) ... Setting up build-essential (12.6ubuntu1) ... Processing triggers for systemd (240-6ubuntu1) ... Processing triggers for libc-bin (2.29-0ubuntu1) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16447224 i386 disco-proposed -c chroot:build-PACKAGEBUILD-16447224 --arch=i386 --dist=disco-proposed --nolog python-biopython_1.73+dfsg-1ubuntu1.dsc Initiating build PACKAGEBUILD-16447224 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:45 UTC 2019 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-030.buildd +==============================================================================+ | python-biopython 1.73+dfsg-1ubuntu1 (i386) 04 Mar 2019 19:46 | +==============================================================================+ Package: python-biopython Version: 1.73+dfsg-1ubuntu1 Source Version: 1.73+dfsg-1ubuntu1 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/python-biopython-80soGe/python-biopython-1.73+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/python-biopython-80soGe' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16447224/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-biopython_1.73+dfsg-1ubuntu1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-lHMQDF/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-lHMQDF/apt_archive ./ InRelease Get:2 copy:/<>/resolver-lHMQDF/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-lHMQDF/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-lHMQDF/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-lHMQDF/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (71.8 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-lHMQDF/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 12~), dh-python, python-all-dev, python3-all-dev, python-numpy, python3-numpy, flex, python-reportlab, python3-reportlab, hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, ncbi-blast+, phylip, phyml, prank, probcons, python-mysqldb, python3-mysqldb, python-matplotlib, python3-matplotlib, python-pil, python3-pil, python-rdflib (>= 4), python3-rdflib, python-renderpm, python3-renderpm, python-psycopg2, python3-psycopg2, python-scipy, python3-scipy, python-setuptools, python3-setuptools, t-coffee, wise (>= 2.4.1-16) Filtered Build-Depends: debhelper (>= 12~), dh-python, python-all-dev, python3-all-dev, python-numpy, python3-numpy, flex, python-reportlab, python3-reportlab, hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, ncbi-blast+, phylip, phyml, prank, probcons, python-mysqldb, python3-mysqldb, python-matplotlib, python3-matplotlib, python-pil, python3-pil, python-rdflib (>= 4), python3-rdflib, python-renderpm, python3-renderpm, python-psycopg2, python3-psycopg2, python-scipy, python3-scipy, python-setuptools, python3-setuptools, t-coffee, wise (>= 2.4.1-16) dpkg-deb: building package 'sbuild-build-depends-python-biopython-dummy' in '/<>/resolver-FZKGfc/apt_archive/sbuild-build-depends-python-biopython-dummy.deb'. Ign:1 copy:/<>/resolver-FZKGfc/apt_archive ./ InRelease Get:2 copy:/<>/resolver-FZKGfc/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-FZKGfc/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-FZKGfc/apt_archive ./ Sources [493 B] Get:5 copy:/<>/resolver-FZKGfc/apt_archive ./ Packages [780 B] Fetched 3392 B in 0s (237 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install python-biopython build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils clustalo clustalw debhelper dh-autoreconf dh-python dh-strip-nondeterminism dialign dssp dwz emboss emboss-data emboss-lib fasttree file flex fontconfig-config fonts-dejavu-core fonts-lmodern fonts-lyx gettext gettext-base ghostscript groff-base gsfonts hevea intltool-debian libarchive-zip-perl libargtable2-0 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-program-options1.67.0 libboost-system1.67.0 libboost-thread1.67.0 libbrotli1 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libedit2 libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhpdf-2.3.0 libhwloc-plugins libhwloc5 libhx509-5-heimdal libibverbs1 libice6 libicu63 libijs-0.35 libimagequant0 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblmdb0 libltdl7 libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libmysqlclient20 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3 libpaper-utils libpaper1 libpciaccess0 libpipeline1 libpixman-1-0 libpmix2 libpotrace0 libpq5 libpsm-infinipath1 libptexenc1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librdmacm1 libroken18-heimdal libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 mafft man-db mime-support muscle mysql-common ncbi-blast+ ncbi-data netpbm ocaml-base-nox ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client phylip phyml po-debconf poppler-data prank preview-latex-style probcons python python-all python-all-dev python-backports.functools-lru-cache python-cycler python-dateutil python-decorator python-dev python-isodate python-kiwisolver python-matplotlib python-matplotlib-data python-matplotlib2-data python-minimal python-mysqldb python-numpy python-pil python-pkg-resources python-psycopg2 python-pyparsing python-rdflib python-renderpm python-reportlab python-reportlab-accel python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-all python3-all-dev python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-isodate python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-mysqldb python3-numpy python3-pil python3-pkg-resources python3-psycopg2 python3-pyparsing python3-rdflib python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal t-coffee t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf wise wise-data x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation clustalx seaview dh-make emboss-doc emboss-test embassy bison flex-doc gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x groff hevea-doc cups-common libgd-tools krb5-doc krb5-user libhwloc-contrib-plugins libjs-jquery-ui-docs liblcms2-utils pciutils libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd gfortran keychain libpam-ssh monkeysphere ssh-askpass phylip-doc libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum probcons-extra python-doc python-tk python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 inkscape ipython librsvg2-common python-cairocffi python-configobj python-excelerator python-gi python-gobject-2 python-matplotlib2-doc python-nose python-qt4 python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils ttf-staypuft default-mysql-server | virtual-mysql-server python-egenix-mxdatetime python-mysqldb-dbg python-pytest python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg python-psycopg2-doc python-pyparsing-doc python-rdflib-doc python-rdflib-tools python-renderpm-dbg pdf-viewer python-egenix-mxtexttools python-reportlab-doc python-scipy-doc python-setuptools-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv ipython3 python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt4 python3-sip python3-tornado python3-mysqldb-dbg python3-pytest python3-numpy-dbg python3-pil-dbg python3-renderpm-dbg python3-egenix-mxtexttools python3.7-venv python3.7-doc boxshade t-coffee-examples perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex wise-doc Recommended packages: primer3 libfl-dev curl | wget | lynx libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback ibverbs-providers javascript-common krb5-locales libsasl2-modules libltdl-dev blast2 libwww-perl lynx ruby libopenmpi-dev xauth libmail-sendmail-perl python-tk python-olefile python-egenix-mxdatetime python-sparqlwrapper python-html5lib python3-tk python3-olefile python3-sparqlwrapper python3-html5lib amap-align dialign-tx fsa kalign libsoap-lite-perl libxml-simple-perl mustang poa proda tm-align lmodern tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils clustalo clustalw debhelper dh-autoreconf dh-python dh-strip-nondeterminism dialign dssp dwz emboss emboss-data emboss-lib fasttree file flex fontconfig-config fonts-dejavu-core fonts-lmodern fonts-lyx gettext gettext-base ghostscript groff-base gsfonts hevea intltool-debian libarchive-zip-perl libargtable2-0 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-program-options1.67.0 libboost-system1.67.0 libboost-thread1.67.0 libbrotli1 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libedit2 libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhpdf-2.3.0 libhwloc-plugins libhwloc5 libhx509-5-heimdal libibverbs1 libice6 libicu63 libijs-0.35 libimagequant0 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblmdb0 libltdl7 libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libmysqlclient20 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3 libpaper-utils libpaper1 libpciaccess0 libpipeline1 libpixman-1-0 libpmix2 libpotrace0 libpq5 libpsm-infinipath1 libptexenc1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librdmacm1 libroken18-heimdal libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 mafft man-db mime-support muscle mysql-common ncbi-blast+ ncbi-data netpbm ocaml-base-nox ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client phylip phyml po-debconf poppler-data prank preview-latex-style probcons python python-all python-all-dev python-backports.functools-lru-cache python-cycler python-dateutil python-decorator python-dev python-isodate python-kiwisolver python-matplotlib python-matplotlib-data python-matplotlib2-data python-minimal python-mysqldb python-numpy python-pil python-pkg-resources python-psycopg2 python-pyparsing python-rdflib python-renderpm python-reportlab python-reportlab-accel python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-all python3-all-dev python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-isodate python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-mysqldb python3-numpy python3-pil python3-pkg-resources python3-psycopg2 python3-pyparsing python3-rdflib python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal sbuild-build-depends-python-biopython-dummy t-coffee t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf wise wise-data x11-common xdg-utils 0 upgraded, 275 newly installed, 0 to remove and 0 not upgraded. Need to get 354 MB of archives. After this operation, 1433 MB of additional disk space will be used. Get:1 copy:/<>/resolver-FZKGfc/apt_archive ./ sbuild-build-depends-python-biopython-dummy 0.invalid.0 [1100 B] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3.7-minimal i386 3.7.2-3 [546 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main i386 libexpat1 i386 2.2.6-1 [84.8 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3.7-minimal i386 3.7.2-3 [1699 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main i386 python3-minimal i386 3.7.2-1 [23.5 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main i386 mime-support all 3.60ubuntu1 [30.1 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main i386 libmpdec2 i386 2.4.2-2 [80.0 kB] Get:8 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3.7-stdlib i386 3.7.2-3 [1749 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3.7 i386 3.7.2-3 [277 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main i386 libpython3-stdlib i386 3.7.2-1 [7024 B] Get:11 http://ftpmaster.internal/ubuntu disco/main i386 python3 i386 3.7.2-1 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main i386 libxau6 i386 1:1.0.8-1 [8352 B] Get:13 http://ftpmaster.internal/ubuntu disco/main i386 libbsd0 i386 0.9.1-1 [48.8 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main i386 libxdmcp6 i386 1:1.1.2-3 [11.1 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main i386 libxcb1 i386 1.13.1-2 [49.9 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main i386 libx11-data all 2:1.6.7-1 [113 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main i386 libx11-6 i386 2:1.6.7-1 [594 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main i386 libxext6 i386 2:1.3.3-1 [31.6 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main i386 bsdmainutils i386 11.1.2ubuntu2 [183 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main i386 groff-base i386 1.22.4-3 [879 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main i386 libpipeline1 i386 1.5.1-2 [28.0 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main i386 man-db i386 2.8.5-2 [1111 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main i386 libsigsegv2 i386 2.12-2 [14.2 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main i386 m4 i386 1.4.18-2 [202 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main i386 flex i386 2.6.4-6.2 [307 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main i386 poppler-data all 0.4.9-2 [1475 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7-minimal i386 2.7.16~rc1-1 [335 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main i386 python2.7-minimal i386 2.7.16~rc1-1 [1325 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main i386 python2-minimal i386 2.7.15-4 [28.0 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main i386 python-minimal i386 2.7.15-4 [5980 B] Get:32 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7-stdlib i386 2.7.16~rc1-1 [1933 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main i386 python2.7 i386 2.7.16~rc1-1 [244 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main i386 libpython2-stdlib i386 2.7.15-4 [7592 B] Get:35 http://ftpmaster.internal/ubuntu disco/main i386 libpython-stdlib i386 2.7.15-4 [5824 B] Get:36 http://ftpmaster.internal/ubuntu disco/main i386 python2 i386 2.7.15-4 [26.5 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main i386 python i386 2.7.15-4 [7832 B] Get:38 http://ftpmaster.internal/ubuntu disco/main i386 ucf all 3.0038+nmu1 [51.6 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main i386 tex-common all 6.11 [32.7 kB] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libmagic-mgc i386 1:5.35-4 [200 kB] Get:41 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libmagic1 i386 1:5.35-4 [80.4 kB] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main i386 file i386 1:5.35-4 [22.9 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main i386 libdbus-1-3 i386 1.12.12-1ubuntu1 [190 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main i386 libelf1 i386 0.176-1 [50.0 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libglib2.0-0 i386 2.59.3-2 [1313 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main i386 libicu63 i386 63.1-6 [8435 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main i386 libxml2 i386 2.9.4+dfsg1-7ubuntu3 [658 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main i386 gettext-base i386 0.19.8.1-9 [51.2 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main i386 libedit2 i386 3.1-20181209-1 [89.8 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main i386 libkrb5support0 i386 1.17-1 [36.2 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main i386 libk5crypto3 i386 1.17-1 [90.0 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libkeyutils1 i386 1.6-5 [10.6 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main i386 libkrb5-3 i386 1.17-1 [357 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main i386 libgssapi-krb5-2 i386 1.17-1 [132 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main i386 libnuma1 i386 2.0.12-1 [22.5 kB] Get:56 http://ftpmaster.internal/ubuntu disco-proposed/main i386 openssh-client i386 1:7.9p1-9 [649 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main i386 autoconf all 2.69-11 [322 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main i386 autotools-dev all 20180224.1 [39.6 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main i386 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main i386 autopoint all 0.19.8.1-9 [412 kB] Get:61 http://ftpmaster.internal/ubuntu disco/universe i386 libargtable2-0 i386 13-1 [14.6 kB] Get:62 http://ftpmaster.internal/ubuntu disco/universe i386 clustalo i386 1.2.4-2 [269 kB] Get:63 http://ftpmaster.internal/ubuntu disco/universe i386 clustalw i386 2.1+lgpl-6 [294 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main i386 libtool all 2.4.6-10 [194 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main i386 dh-autoreconf all 19 [16.1 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main i386 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main i386 libfile-stripnondeterminism-perl all 1.1.1-1 [13.7 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main i386 dh-strip-nondeterminism all 1.1.1-1 [5200 B] Get:69 http://ftpmaster.internal/ubuntu disco/main i386 dwz i386 0.12-3 [81.5 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main i386 libcroco3 i386 0.6.12-3 [87.9 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main i386 gettext i386 0.19.8.1-9 [905 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main i386 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main i386 po-debconf all 1.0.21 [233 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main i386 debhelper all 12ubuntu1 [887 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main i386 python3-lib2to3 all 3.7.2-3ubuntu1 [75.5 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main i386 python3-distutils all 3.7.2-3ubuntu1 [140 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main i386 dh-python all 3.20180927ubuntu2 [90.9 kB] Get:78 http://ftpmaster.internal/ubuntu disco/universe i386 dialign i386 2.2.1-10 [143 kB] Get:79 http://ftpmaster.internal/ubuntu disco/main i386 libboost-program-options1.67.0 i386 1.67.0-13 [338 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main i386 libboost-system1.67.0 i386 1.67.0-13 [205 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main i386 libboost-thread1.67.0 i386 1.67.0-13 [243 kB] Get:82 http://ftpmaster.internal/ubuntu disco/universe i386 dssp i386 3.0.0-3 [262 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main i386 libfreetype6 i386 2.9.1-3 [350 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main i386 fonts-dejavu-core all 2.37-1 [1041 kB] Get:85 http://ftpmaster.internal/ubuntu disco/universe i386 ttf-bitstream-vera all 1.10-8 [352 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main i386 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main i386 libfontconfig1 i386 2.13.1-2ubuntu2 [124 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main i386 libjpeg-turbo8 i386 2.0.1-0ubuntu2 [126 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main i386 libjpeg8 i386 8c-2ubuntu8 [2188 B] Get:90 http://ftpmaster.internal/ubuntu disco/main i386 libjbig0 i386 2.1-3.1build1 [27.3 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main i386 libwebp6 i386 0.6.1-2 [197 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main i386 libtiff5 i386 4.0.10-4 [168 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main i386 libxpm4 i386 1:3.5.12-1 [35.8 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main i386 libgd3 i386 2.2.5-5.1 [123 kB] Get:95 http://ftpmaster.internal/ubuntu disco/universe i386 libhpdf-2.3.0 i386 2.3.0+dfsg-1 [352 kB] Get:96 http://ftpmaster.internal/ubuntu disco/main i386 mysql-common all 5.8+1.0.5 [7352 B] Get:97 http://ftpmaster.internal/ubuntu disco/main i386 libmysqlclient20 i386 5.7.25-1 [807 kB] Get:98 http://ftpmaster.internal/ubuntu disco/main i386 libroken18-heimdal i386 7.5.0+dfsg-2.1 [44.7 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main i386 libasn1-8-heimdal i386 7.5.0+dfsg-2.1 [186 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main i386 libheimbase1-heimdal i386 7.5.0+dfsg-2.1 [32.2 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main i386 libhcrypto4-heimdal i386 7.5.0+dfsg-2.1 [93.4 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main i386 libwind0-heimdal i386 7.5.0+dfsg-2.1 [48.4 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main i386 libhx509-5-heimdal i386 7.5.0+dfsg-2.1 [117 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main i386 libkrb5-26-heimdal i386 7.5.0+dfsg-2.1 [230 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main i386 libheimntlm0-heimdal i386 7.5.0+dfsg-2.1 [16.3 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main i386 libgssapi3-heimdal i386 7.5.0+dfsg-2.1 [106 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1 [15.8 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main i386 libsasl2-2 i386 2.1.27+dfsg-1 [52.8 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main i386 libldap-common all 2.4.47+dfsg-3ubuntu1 [16.5 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main i386 libldap-2.4-2 i386 2.4.47+dfsg-3ubuntu1 [166 kB] Get:111 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpq5 i386 11.2-1 [113 kB] Get:112 http://ftpmaster.internal/ubuntu disco/universe i386 emboss-lib i386 6.6.0+dfsg-7 [2874 kB] Get:113 http://ftpmaster.internal/ubuntu disco/universe i386 emboss-data all 6.6.0+dfsg-7 [61.0 MB] Get:114 http://ftpmaster.internal/ubuntu disco/universe i386 emboss i386 6.6.0+dfsg-7 [983 kB] Get:115 http://ftpmaster.internal/ubuntu disco/main i386 fonts-lmodern all 2.004.5-6 [4532 kB] Get:116 http://ftpmaster.internal/ubuntu disco/universe i386 fonts-lyx all 2.3.2-1 [154 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main i386 libavahi-common-data i386 0.7-4ubuntu5 [21.4 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main i386 libavahi-common3 i386 0.7-4ubuntu5 [23.1 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main i386 libavahi-client3 i386 0.7-4ubuntu5 [27.6 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main i386 libcups2 i386 2.2.10-4 [225 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main i386 libcupsimage2 i386 2.2.10-4 [19.3 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main i386 libijs-0.35 i386 0.35-13 [16.0 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main i386 libjbig2dec0 i386 0.15-2 [61.1 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main i386 libpaper1 i386 1.1.26 [13.0 kB] Get:125 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgs9-common all 9.26~dfsg+0-0ubuntu6 [5092 kB] Get:126 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgs9 i386 9.26~dfsg+0-0ubuntu6 [2507 kB] Get:127 http://ftpmaster.internal/ubuntu disco-proposed/main i386 ghostscript i386 9.26~dfsg+0-0ubuntu6 [51.6 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main i386 gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.4 [3120 kB] Get:129 http://ftpmaster.internal/ubuntu disco/universe i386 libnetpbm10 i386 2:10.0-15.3build1 [58.1 kB] Get:130 http://ftpmaster.internal/ubuntu disco/universe i386 netpbm i386 2:10.0-15.3build1 [941 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main i386 libpaper-utils i386 1.1.26 [8516 B] Get:132 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libkpathsea6 i386 2018.20181218.49446-2 [59.6 kB] Get:133 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libptexenc1 i386 2018.20181218.49446-2 [35.8 kB] Get:134 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libsynctex2 i386 2018.20181218.49446-2 [56.8 kB] Get:135 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libtexlua52 i386 2018.20181218.49446-2 [98.7 kB] Get:136 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libtexlua53 i386 2018.20181218.49446-2 [118 kB] Get:137 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libtexluajit2 i386 2018.20181218.49446-2 [247 kB] Get:138 http://ftpmaster.internal/ubuntu disco/main i386 t1utils i386 1.41-3 [56.0 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main i386 libbrotli1 i386 1.0.7-2 [265 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main i386 libpixman-1-0 i386 0.36.0-1 [233 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main i386 libxcb-render0 i386 1.13.1-2 [15.9 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main i386 libxcb-shm0 i386 1.13.1-2 [5744 B] Get:143 http://ftpmaster.internal/ubuntu disco/main i386 libxrender1 i386 1:0.9.10-1 [19.9 kB] Get:144 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libcairo2 i386 1.16.0-3 [638 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main i386 libgraphite2-3 i386 1.3.13-7 [76.5 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main i386 libharfbuzz0b i386 2.3.1-1 [380 kB] Get:147 http://ftpmaster.internal/ubuntu disco/main i386 libharfbuzz-icu0 i386 2.3.1-1 [5684 B] Get:148 http://ftpmaster.internal/ubuntu disco/main i386 libpotrace0 i386 1.15-1 [16.9 kB] Get:149 http://ftpmaster.internal/ubuntu disco/main i386 libteckit0 i386 2.5.8+ds2-5ubuntu1 [267 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main i386 libwoff1 i386 1.0.2-1build1 [45.5 kB] Get:151 http://ftpmaster.internal/ubuntu disco/main i386 x11-common all 1:7.7+19ubuntu9 [22.4 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main i386 libice6 i386 2:1.0.9-2 [42.6 kB] Get:153 http://ftpmaster.internal/ubuntu disco/main i386 libsm6 i386 2:1.2.3-1 [16.7 kB] Get:154 http://ftpmaster.internal/ubuntu disco/main i386 libxt6 i386 1:1.1.5-1 [164 kB] Get:155 http://ftpmaster.internal/ubuntu disco/main i386 libxmu6 i386 2:1.1.2-2 [48.4 kB] Get:156 http://ftpmaster.internal/ubuntu disco/main i386 libxaw7 i386 2:1.0.13-1 [182 kB] Get:157 http://ftpmaster.internal/ubuntu disco/main i386 libxi6 i386 2:1.7.9-1 [31.7 kB] Get:158 http://ftpmaster.internal/ubuntu disco/main i386 libxxhash0 i386 0.6.5-2 [8792 B] Get:159 http://ftpmaster.internal/ubuntu disco/main i386 libzzip-0-13 i386 0.13.62-3.1ubuntu1 [27.8 kB] Get:160 http://ftpmaster.internal/ubuntu disco-proposed/main i386 texlive-binaries i386 2018.20181218.49446-2 [11.4 MB] Get:161 http://ftpmaster.internal/ubuntu disco/main i386 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB] Get:162 http://ftpmaster.internal/ubuntu disco/main i386 texlive-base all 2018.20190227-1 [19.8 MB] Get:163 http://ftpmaster.internal/ubuntu disco/universe i386 ocaml-base-nox i386 4.05.0-10ubuntu2 [509 kB] Get:164 http://ftpmaster.internal/ubuntu disco/universe i386 hevea all 2.32-2 [884 kB] Get:165 http://ftpmaster.internal/ubuntu disco/main i386 libblas3 i386 3.8.0-2 [132 kB] Get:166 http://ftpmaster.internal/ubuntu disco/main i386 libevent-2.1-6 i386 2.1.8-stable-4build1 [146 kB] Get:167 http://ftpmaster.internal/ubuntu disco/main i386 libevent-core-2.1-6 i386 2.1.8-stable-4build1 [93.6 kB] Get:168 http://ftpmaster.internal/ubuntu disco/main i386 libevent-pthreads-2.1-6 i386 2.1.8-stable-4build1 [5408 B] Get:169 http://ftpmaster.internal/ubuntu disco/main i386 libexpat1-dev i386 2.2.6-1 [137 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main i386 libnl-3-200 i386 3.4.0-1 [56.6 kB] Get:171 http://ftpmaster.internal/ubuntu disco/main i386 libnl-route-3-200 i386 3.4.0-1 [156 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main i386 libibverbs1 i386 22.1-1 [52.9 kB] Get:173 http://ftpmaster.internal/ubuntu disco/universe i386 libpsm-infinipath1 i386 3.3+20.604758e7-6 [177 kB] Get:174 http://ftpmaster.internal/ubuntu disco/main i386 librdmacm1 i386 22.1-1 [66.9 kB] Get:175 http://ftpmaster.internal/ubuntu disco/universe i386 libfabric1 i386 1.6.2-3 [364 kB] Get:176 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgfortran5 i386 9-20190227-0ubuntu1 [601 kB] Get:177 http://ftpmaster.internal/ubuntu disco/universe i386 libimagequant0 i386 2.12.2-1 [32.5 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main i386 libjs-jquery all 3.3.1~dfsg-1 [329 kB] Get:179 http://ftpmaster.internal/ubuntu disco/universe i386 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:180 http://ftpmaster.internal/ubuntu disco/main i386 liblapack3 i386 3.8.0-2 [1960 kB] Get:181 http://ftpmaster.internal/ubuntu disco/main i386 liblcms2-2 i386 2.9-3 [149 kB] Get:182 http://ftpmaster.internal/ubuntu disco/universe i386 liblmdb0 i386 0.9.23-0ubuntu1 [46.0 kB] Get:183 http://ftpmaster.internal/ubuntu disco/main i386 libltdl7 i386 2.4.6-10 [40.0 kB] Get:184 http://ftpmaster.internal/ubuntu disco/universe i386 libmbedcrypto3 i386 2.16.0-1 [162 kB] Get:185 http://ftpmaster.internal/ubuntu disco/universe i386 libmbedx509-0 i386 2.16.0-1 [35.1 kB] Get:186 http://ftpmaster.internal/ubuntu disco/universe i386 libmbedtls12 i386 2.16.0-1 [74.8 kB] Get:187 http://ftpmaster.internal/ubuntu disco/universe i386 libhwloc5 i386 1.11.12-3 [115 kB] Get:188 http://ftpmaster.internal/ubuntu disco/main i386 libpciaccess0 i386 0.14-1 [20.2 kB] Get:189 http://ftpmaster.internal/ubuntu disco/main i386 ocl-icd-libopencl1 i386 2.2.11-1ubuntu1 [31.3 kB] Get:190 http://ftpmaster.internal/ubuntu disco/universe i386 libhwloc-plugins i386 1.11.12-3 [13.3 kB] Get:191 http://ftpmaster.internal/ubuntu disco/universe i386 libpmix2 i386 3.1.2-2 [539 kB] Get:192 http://ftpmaster.internal/ubuntu disco/universe i386 libopenmpi3 i386 3.1.3-10 [2648 kB] Get:193 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7 i386 2.7.16~rc1-1 [1058 kB] Get:194 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7-dev i386 2.7.16~rc1-1 [31.4 MB] Get:195 http://ftpmaster.internal/ubuntu disco/main i386 libpython2-dev i386 2.7.15-4 [7656 B] Get:196 http://ftpmaster.internal/ubuntu disco/main i386 libpython-dev i386 2.7.15-4 [5892 B] Get:197 http://ftpmaster.internal/ubuntu disco/main i386 libpython-all-dev i386 2.7.15-4 [1104 B] Get:198 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3.7 i386 3.7.2-3 [1504 kB] Get:199 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3.7-dev i386 3.7.2-3 [47.8 MB] Get:200 http://ftpmaster.internal/ubuntu disco/main i386 libpython3-dev i386 3.7.2-1 [7144 B] Get:201 http://ftpmaster.internal/ubuntu disco/main i386 libpython3-all-dev i386 3.7.2-1 [1108 B] Get:202 http://ftpmaster.internal/ubuntu disco/main i386 libwebpdemux2 i386 0.6.1-2 [9824 B] Get:203 http://ftpmaster.internal/ubuntu disco/main i386 libwebpmux3 i386 0.6.1-2 [21.0 kB] Get:204 http://ftpmaster.internal/ubuntu disco/universe i386 mafft i386 7.407-2 [925 kB] Get:205 http://ftpmaster.internal/ubuntu disco/universe i386 muscle i386 1:3.8.1551-1 [235 kB] Get:206 http://ftpmaster.internal/ubuntu disco/universe i386 ncbi-data all 6.1.20170106-6 [3659 kB] Get:207 http://ftpmaster.internal/ubuntu disco/universe i386 ncbi-blast+ i386 2.8.1-1 [11.6 MB] Get:208 http://ftpmaster.internal/ubuntu disco/universe i386 openmpi-common all 3.1.3-10 [147 kB] Get:209 http://ftpmaster.internal/ubuntu disco/universe i386 openmpi-bin i386 3.1.3-10 [87.2 kB] Get:210 http://ftpmaster.internal/ubuntu disco/universe i386 phylip i386 1:3.697+dfsg-1 [963 kB] Get:211 http://ftpmaster.internal/ubuntu disco/universe i386 phyml i386 3:3.3.20180621-2ubuntu1 [1573 kB] Get:212 http://ftpmaster.internal/ubuntu disco/universe i386 prank i386 0.0.170427+dfsg-2 [395 kB] Get:213 http://ftpmaster.internal/ubuntu disco/main i386 preview-latex-style all 11.91-1ubuntu1 [185 kB] Get:214 http://ftpmaster.internal/ubuntu disco/universe i386 probcons i386 1.12-12 [106 kB] Get:215 http://ftpmaster.internal/ubuntu disco/universe i386 python-all i386 2.7.15-4 [1084 B] Get:216 http://ftpmaster.internal/ubuntu disco/main i386 python2.7-dev i386 2.7.16~rc1-1 [278 kB] Get:217 http://ftpmaster.internal/ubuntu disco/main i386 python2-dev i386 2.7.15-4 [1252 B] Get:218 http://ftpmaster.internal/ubuntu disco/main i386 python-dev i386 2.7.15-4 [1224 B] Get:219 http://ftpmaster.internal/ubuntu disco/universe i386 python-all-dev i386 2.7.15-4 [1112 B] Get:220 http://ftpmaster.internal/ubuntu disco/universe i386 python-backports.functools-lru-cache all 1.5-2 [6372 B] Get:221 http://ftpmaster.internal/ubuntu disco/main i386 python-six all 1.12.0-1 [11.6 kB] Get:222 http://ftpmaster.internal/ubuntu disco/universe i386 python-cycler all 0.10.0-1 [7520 B] Get:223 http://ftpmaster.internal/ubuntu disco/main i386 python-dateutil all 2.7.3-3 [75.5 kB] Get:224 http://ftpmaster.internal/ubuntu disco/universe i386 python-decorator all 4.3.0-1.1 [9524 B] Get:225 http://ftpmaster.internal/ubuntu disco/universe i386 python-isodate all 0.6.0-1 [23.8 kB] Get:226 http://ftpmaster.internal/ubuntu disco/main i386 python-pkg-resources all 40.8.0-1 [129 kB] Get:227 http://ftpmaster.internal/ubuntu disco/universe i386 python-kiwisolver i386 1.0.1-2build2 [70.6 kB] Get:228 http://ftpmaster.internal/ubuntu disco/universe i386 python-matplotlib2-data all 2.2.3-6 [3774 kB] Get:229 http://ftpmaster.internal/ubuntu disco/main i386 python-pyparsing all 2.2.0+dfsg1-2 [52.1 kB] Get:230 http://ftpmaster.internal/ubuntu disco/main i386 python-tz all 2018.9-1 [31.1 kB] Get:231 http://ftpmaster.internal/ubuntu disco/universe i386 python-numpy i386 1:1.16.1-1ubuntu1 [2084 kB] Get:232 http://ftpmaster.internal/ubuntu disco/universe i386 python-subprocess32 i386 3.5.3-1 [27.0 kB] Get:233 http://ftpmaster.internal/ubuntu disco/universe i386 python-matplotlib i386 2.2.3-6 [4249 kB] Get:234 http://ftpmaster.internal/ubuntu disco/universe i386 python-matplotlib-data all 3.0.2-2 [3776 kB] Get:235 http://ftpmaster.internal/ubuntu disco/universe i386 python-mysqldb i386 1.3.10-2 [49.7 kB] Get:236 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python-pil i386 5.4.1-1 [341 kB] Get:237 http://ftpmaster.internal/ubuntu disco/universe i386 python-psycopg2 i386 2.7.7-1 [159 kB] Get:238 http://ftpmaster.internal/ubuntu disco/universe i386 python-rdflib all 4.2.2-2 [241 kB] Get:239 http://ftpmaster.internal/ubuntu disco/universe i386 python-renderpm i386 3.5.13-1 [62.0 kB] Get:240 http://ftpmaster.internal/ubuntu disco/universe i386 python-reportlab-accel i386 3.5.13-1 [23.7 kB] Get:241 http://ftpmaster.internal/ubuntu disco/universe i386 python-reportlab all 3.5.13-1 [527 kB] Get:242 http://ftpmaster.internal/ubuntu disco/main i386 python-setuptools all 40.8.0-1 [329 kB] Get:243 http://ftpmaster.internal/ubuntu disco/main i386 python3-all i386 3.7.2-1 [1104 B] Get:244 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3.7-dev i386 3.7.2-3 [511 kB] Get:245 http://ftpmaster.internal/ubuntu disco/main i386 python3-dev i386 3.7.2-1 [1300 B] Get:246 http://ftpmaster.internal/ubuntu disco/main i386 python3-all-dev i386 3.7.2-1 [1104 B] Get:247 http://ftpmaster.internal/ubuntu disco/main i386 python3-six all 1.12.0-1 [11.7 kB] Get:248 http://ftpmaster.internal/ubuntu disco/universe i386 python3-cycler all 0.10.0-1 [7622 B] Get:249 http://ftpmaster.internal/ubuntu disco/main i386 python3-dateutil all 2.7.3-3 [63.3 kB] Get:250 http://ftpmaster.internal/ubuntu disco/main i386 python3-decorator all 4.3.0-1.1 [9600 B] Get:251 http://ftpmaster.internal/ubuntu disco/universe i386 python3-isodate all 0.6.0-1 [23.9 kB] Get:252 http://ftpmaster.internal/ubuntu disco/main i386 python3-pkg-resources all 40.8.0-1 [100 kB] Get:253 http://ftpmaster.internal/ubuntu disco/universe i386 python3-kiwisolver i386 1.0.1-2build2 [69.4 kB] Get:254 http://ftpmaster.internal/ubuntu disco/main i386 python3-pyparsing all 2.2.0+dfsg1-2 [52.2 kB] Get:255 http://ftpmaster.internal/ubuntu disco/main i386 python3-numpy i386 1:1.16.1-1ubuntu1 [2100 kB] Get:256 http://ftpmaster.internal/ubuntu disco/universe i386 python3-matplotlib i386 3.0.2-2 [4510 kB] Get:257 http://ftpmaster.internal/ubuntu disco/main i386 python3-mysqldb i386 1.3.10-2 [46.7 kB] Get:258 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-pil i386 5.4.1-1 [342 kB] Get:259 http://ftpmaster.internal/ubuntu disco/main i386 python3-psycopg2 i386 2.7.7-1 [157 kB] Get:260 http://ftpmaster.internal/ubuntu disco/universe i386 python3-rdflib all 4.2.2-2 [239 kB] Get:261 http://ftpmaster.internal/ubuntu disco/main i386 python3-renderpm i386 3.5.13-1 [62.4 kB] Get:262 http://ftpmaster.internal/ubuntu disco/main i386 python3-reportlab-accel i386 3.5.13-1 [19.2 kB] Get:263 http://ftpmaster.internal/ubuntu disco/main i386 python3-reportlab all 3.5.13-1 [524 kB] Get:264 http://ftpmaster.internal/ubuntu disco/main i386 python3-setuptools all 40.8.0-1 [252 kB] Get:265 http://ftpmaster.internal/ubuntu disco/universe i386 t-coffee i386 12.00.7fb08c2-4 [1546 kB] Get:266 http://ftpmaster.internal/ubuntu disco/universe i386 texlive-fonts-recommended all 2018.20190227-1 [5199 kB] Get:267 http://ftpmaster.internal/ubuntu disco/main i386 texlive-latex-base all 2018.20190227-1 [954 kB] Get:268 http://ftpmaster.internal/ubuntu disco/main i386 texlive-latex-recommended all 2018.20190227-1 [15.2 MB] Get:269 http://ftpmaster.internal/ubuntu disco/universe i386 texlive-pictures all 2018.20190227-1 [8107 kB] Get:270 http://ftpmaster.internal/ubuntu disco/universe i386 texlive-latex-extra all 2018.20190227-1 [11.9 MB] Get:271 http://ftpmaster.internal/ubuntu disco/universe i386 wise-data all 2.4.1-21 [107 kB] Get:272 http://ftpmaster.internal/ubuntu disco/universe i386 wise i386 2.4.1-21 [1082 kB] Get:273 http://ftpmaster.internal/ubuntu disco/universe i386 fasttree i386 2.1.10-2 [172 kB] Get:274 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-scipy i386 1.2.1-0ubuntu1 [9800 kB] Get:275 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python3-scipy i386 1.2.1-0ubuntu1 [9802 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 354 MB in 8s (44.7 MB/s) Selecting previously unselected package libpython3.7-minimal:i386. (Reading database ... 12771 files and directories currently installed.) Preparing to unpack .../libpython3.7-minimal_3.7.2-3_i386.deb ... Unpacking libpython3.7-minimal:i386 (3.7.2-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.2.6-1_i386.deb ... Unpacking libexpat1:i386 (2.2.6-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.2-3_i386.deb ... Unpacking python3.7-minimal (3.7.2-3) ... Setting up libpython3.7-minimal:i386 (3.7.2-3) ... Setting up libexpat1:i386 (2.2.6-1) ... Setting up python3.7-minimal (3.7.2-3) ... Selecting previously unselected package python3-minimal. (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.2-1_i386.deb ... Unpacking python3-minimal (3.7.2-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.60ubuntu1_all.deb ... 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Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libpython-stdlib:i386 (2.7.15-4) ... Setting up libwind0-heimdal:i386 (7.5.0+dfsg-2.1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libptexenc1:i386 (2018.20181218.49446-2) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-1) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:i386 (2:1.6.7-1) ... Setting up libpython2-dev:i386 (2.7.15-4) ... Setting up libtiff5:i386 (4.0.10-4) ... Setting up libfontconfig1:i386 (2.13.1-2ubuntu2) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up python (2.7.15-4) ... 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Setting up texlive-binaries (2018.20181218.49446-2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper Setting up openmpi-bin (3.1.3-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up phyml (3:3.3.20180621-2ubuntu1) ... 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preview-latex-style_11.91-1ubuntu1 probcons_1.12-12 procps_2:3.3.15-2ubuntu2 python_2.7.15-4 python-all_2.7.15-4 python-all-dev_2.7.15-4 python-backports.functools-lru-cache_1.5-2 python-cycler_0.10.0-1 python-dateutil_2.7.3-3 python-decorator_4.3.0-1.1 python-dev_2.7.15-4 python-isodate_0.6.0-1 python-kiwisolver_1.0.1-2build2 python-matplotlib_2.2.3-6 python-matplotlib-data_3.0.2-2 python-matplotlib2-data_2.2.3-6 python-minimal_2.7.15-4 python-mysqldb_1.3.10-2 python-numpy_1:1.16.1-1ubuntu1 python-pil_5.4.1-1 python-pkg-resources_40.8.0-1 python-psycopg2_2.7.7-1 python-pyparsing_2.2.0+dfsg1-2 python-rdflib_4.2.2-2 python-renderpm_3.5.13-1 python-reportlab_3.5.13-1 python-reportlab-accel_3.5.13-1 python-scipy_1.2.1-0ubuntu1 python-setuptools_40.8.0-1 python-six_1.12.0-1 python-subprocess32_3.5.3-1 python-tz_2018.9-1 python2_2.7.15-4 python2-dev_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.16~rc1-1 python2.7-dev_2.7.16~rc1-1 python2.7-minimal_2.7.16~rc1-1 python3_3.7.2-1 python3-all_3.7.2-1 python3-all-dev_3.7.2-1 python3-cycler_0.10.0-1 python3-dateutil_2.7.3-3 python3-decorator_4.3.0-1.1 python3-dev_3.7.2-1 python3-distutils_3.7.2-3ubuntu1 python3-isodate_0.6.0-1 python3-kiwisolver_1.0.1-2build2 python3-lib2to3_3.7.2-3ubuntu1 python3-matplotlib_3.0.2-2 python3-minimal_3.7.2-1 python3-mysqldb_1.3.10-2 python3-numpy_1:1.16.1-1ubuntu1 python3-pil_5.4.1-1 python3-pkg-resources_40.8.0-1 python3-psycopg2_2.7.7-1 python3-pyparsing_2.2.0+dfsg1-2 python3-rdflib_4.2.2-2 python3-renderpm_3.5.13-1 python3-reportlab_3.5.13-1 python3-reportlab-accel_3.5.13-1 python3-scipy_1.2.1-0ubuntu1 python3-setuptools_40.8.0-1 python3-six_1.12.0-1 python3.7_3.7.2-3 python3.7-dev_3.7.2-3 python3.7-minimal_3.7.2-3 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biopython-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu1 systemd-sysv_240-6ubuntu1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 t-coffee_12.00.7fb08c2-4 t1utils_1.41-3 tar_1.30+dfsg-5 tex-common_6.11 texlive-base_2018.20190227-1 texlive-binaries_2018.20181218.49446-2 texlive-fonts-recommended_2018.20190227-1 texlive-latex-base_2018.20190227-1 texlive-latex-extra_2018.20190227-1 texlive-latex-recommended_2018.20190227-1 texlive-pictures_2018.20190227-1 ttf-bitstream-vera_1.10-8 tzdata_2018i-2 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1ubuntu2 wise_2.4.1-21 wise-data_2.4.1-21 x11-common_1:7.7+19ubuntu9 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Mar 4 19:24:55 2019 UTC gpgv: using RSA key 8BC600805AAC660FEB4D198383401A30B1CDE58F gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-biopython_1.73+dfsg-1ubuntu1.dsc dpkg-source: info: extracting python-biopython in python-biopython-1.73+dfsg dpkg-source: info: unpacking python-biopython_1.73+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biopython_1.73+dfsg-1ubuntu1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_mathml-qname.patch dpkg-source: info: applying privacy_breach.patch dpkg-source: info: applying reportlab3.5.patch dpkg-source: info: applying test_phenotype_fit-ppc64el.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16447224 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16447224 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16447224 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-biopython dpkg-buildpackage: info: source version 1.73+dfsg-1ubuntu1 dpkg-buildpackage: info: source distribution disco dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with python2,python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_clean pybuild --clean -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py clean running clean removing '/<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it pybuild --clean -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; cd Doc && make distclean make[2]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc' make -C install make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) 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No file Installation.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) LaTeX Warning: Reference `sec:windows_install' on page 1 undefined on input lin e 108. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] LaTeX Warning: Reference `sec:is_working' on page 7 undefined on input line 460 . [7] LaTeX Warning: Reference `sec:unix_install' on page 8 undefined on input line 5 37. Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . LaTeX Warning: Reference `sec:is_working' on page 8 undefined on input line 558 . Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' [8] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) Package rerunfilecheck Warning: File `Installation.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 144000 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149747 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149889 bytes). Transcript written on Installation.log. hevea -fix Installation.tex Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:108: Warning: Undefined label: 'sec:windows_install' ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:460: Warning: Undefined label: 'sec:is_working' ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:537: Warning: Undefined label: 'sec:unix_install' ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:558: Warning: Undefined label: 'sec:is_working' ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... 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Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode Fixpoint reached in 2 step(s) make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' ( for f in install ; do make clean -C $f ; done ) make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Installation.aux rm -f Installation.log rm -f Installation.out rm -f Installation.toc rm -f Installation.haux rm -f Installation.htoc make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Tutorial.aux rm -f Tutorial.toc rm -f Tutorial.log rm -f Tutorial.out rm -f Tutorial.haux rm -f Tutorial.htoc rm -f biopdb_faq.aux rm -f biopdb_faq.log rm -f biopdb_faq.out rm -f Tutorial/*.aux ( for f in install ; do make distclean -C $f ; done ) make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Installation.aux rm -f Installation.log rm -f Installation.out rm -f Installation.toc rm -f Installation.haux rm -f Installation.htoc rm -f Installation.pdf rm -f Installation.txt rm -f Installation.html make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f biopdb_faq.pdf rm -f Tutorial.pdf rm -f Tutorial.html rm -f Tutorial.txt rm -f *_motif.gif #output from hacha make[2]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc' rm -f Doc/install/Installation.pdf rm -f Doc/install/Installation.txt rm -f Doc/install/Installation.html rm -f Doc/Tutorial.pdf Doc/biopdb_faq.pdf rm -f Doc/Tutorial/*.aux rm -rf biopython.egg-info rm -rf .pybuild if [ -d Tests_avoid ] ; then \ mv Tests_avoid/* Tests ; \ rmdir Tests_avoid ; \ fi rm -rf debian/tmp_tests make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python-biopython.substvars debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python-biopython-sql.substvars debian/python3-biopython-sql.substvars debian/files rm -fr -- debian/python-biopython/ debian/tmp/ debian/python3-biopython/ debian/python-biopython-doc/ debian/python-biopython-sql/ debian/python3-biopython-sql/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --with python2,python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild pybuild --configure -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py config running config pybuild --configure -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_build pybuild --build -i python{version} -p 2.7 I: pybuild base:217: /usr/bin/python setup.py build running build running build_py creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/File.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align copying Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align copying Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application copying Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS copying Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass copying Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal copying Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez copying Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez copying Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo copying Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo copying Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG copying Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG copying Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline copying Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway copying Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen copying Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics copying Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics copying Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene copying Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt copying Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt copying Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k copying Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy copying Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy copying Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype running egg_info creating biopython.egg-info writing requirements to biopython.egg-info/requires.txt writing biopython.egg-info/PKG-INFO writing top-level names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt writing manifest file 'biopython.egg-info/SOURCES.txt' reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' copying Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/trie.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/trie.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> 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/<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer copying Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree running build_ext building 'Bio.Align._aligners' extension creating build creating build/temp.linux-i386-2.7 creating build/temp.linux-i386-2.7/Bio creating build/temp.linux-i386-2.7/Bio/Align i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Align/_aligners.c -o build/temp.linux-i386-2.7/Bio/Align/_aligners.o Bio/Align/_aligners.c: In function ‘PathGenerator_length’: Bio/Align/_aligners.c:701:22: warning: ‘count’ may be used uninitialized in this function [-Wmaybe-uninitialized] self->length = length; ~~~~~~~~~~~~~^~~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/Align/_aligners.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.so building 'Bio.cpairwise2' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.linux-i386-2.7/Bio/cpairwise2module.o In file included from /usr/include/python2.7/Python.h:103, from Bio/cpairwise2module.c:14: Bio/cpairwise2module.c: In function ‘cpairwise2__make_score_matrix_fast’: /usr/include/python2.7/listobject.h:62:58: warning: ‘py_trace_row’ may be used uninitialized in this function [-Wmaybe-uninitialized] #define PyList_SET_ITEM(op, i, v) (((PyListObject *)(op))->ob_item[i] = (v)) ^~ Bio/cpairwise2module.c:343:34: note: ‘py_trace_row’ was declared here PyObject *py_score_row, *py_trace_row; ^~~~~~~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/cpairwise2module.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-i386-2.7/Bio/Nexus i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Nexus/cnexus.c -o build/temp.linux-i386-2.7/Bio/Nexus/cnexus.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/Nexus/cnexus.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-i386-2.7/Bio/PDB creating build/temp.linux-i386-2.7/Bio/PDB/QCPSuperimposer i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-i386-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.so building 'Bio.motifs._pwm' extension creating build/temp.linux-i386-2.7/Bio/motifs i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/motifs/_pwm.c -o build/temp.linux-i386-2.7/Bio/motifs/_pwm.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/motifs/_pwm.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-i386-2.7/Bio/Cluster i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Cluster/cluster.c -o build/temp.linux-i386-2.7/Bio/Cluster/cluster.o i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Cluster/clustermodule.c -o build/temp.linux-i386-2.7/Bio/Cluster/clustermodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/Cluster/cluster.o build/temp.linux-i386-2.7/Bio/Cluster/clustermodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/_cluster.so building 'Bio.PDB.kdtrees' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/PDB/kdtrees.c -o build/temp.linux-i386-2.7/Bio/PDB/kdtrees.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/PDB/kdtrees.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-i386-2.7/Bio/KDTree i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/KDTree/KDTree.c -o build/temp.linux-i386-2.7/Bio/KDTree/KDTree.o i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-i386-2.7/Bio/KDTree/KDTreemodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/KDTree/KDTree.o build/temp.linux-i386-2.7/Bio/KDTree/KDTreemodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/_CKDTree.so building 'Bio.trie' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/triemodule.c -o build/temp.linux-i386-2.7/Bio/triemodule.o i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/trie.c -o build/temp.linux-i386-2.7/Bio/trie.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-CSEwey/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/Bio/triemodule.o build/temp.linux-i386-2.7/Bio/trie.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.so pybuild --build -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/File.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align copying Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align copying Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application copying Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS copying Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass copying Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal copying Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez copying Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez copying Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo copying Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo copying Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG copying Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG copying Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline copying Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway copying Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen copying Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics copying Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics copying Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene copying Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt copying Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt copying Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k copying Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy copying Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy copying Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' copying Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/trie.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/trie.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> 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copying Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> 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Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer copying Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree running build_ext building 'Bio.Align._aligners' extension creating build/temp.linux-i386-3.7 creating build/temp.linux-i386-3.7/Bio creating build/temp.linux-i386-3.7/Bio/Align i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Align/_aligners.c -o build/temp.linux-i386-3.7/Bio/Align/_aligners.o Bio/Align/_aligners.c: In function ‘PathGenerator_length’: Bio/Align/_aligners.c:701:22: warning: ‘count’ may be used uninitialized in this function [-Wmaybe-uninitialized] self->length = length; ~~~~~~~~~~~~~^~~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/Align/_aligners.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so building 'Bio.cpairwise2' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/cpairwise2module.c -o build/temp.linux-i386-3.7/Bio/cpairwise2module.o In file included from /usr/include/python3.7m/Python.h:108, from Bio/cpairwise2module.c:14: Bio/cpairwise2module.c: In function ‘cpairwise2__make_score_matrix_fast’: /usr/include/python3.7m/listobject.h:73:58: warning: ‘py_trace_row’ may be used uninitialized in this function [-Wmaybe-uninitialized] #define PyList_SET_ITEM(op, i, v) (((PyListObject *)(op))->ob_item[i] = (v)) ^~ Bio/cpairwise2module.c:343:34: note: ‘py_trace_row’ was declared here PyObject *py_score_row, *py_trace_row; ^~~~~~~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/cpairwise2module.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-i386-3.7/Bio/Nexus i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Nexus/cnexus.c -o build/temp.linux-i386-3.7/Bio/Nexus/cnexus.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/Nexus/cnexus.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-i386-3.7/Bio/PDB creating build/temp.linux-i386-3.7/Bio/PDB/QCPSuperimposer i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-i386-3.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so building 'Bio.motifs._pwm' extension creating build/temp.linux-i386-3.7/Bio/motifs i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/motifs/_pwm.c -o build/temp.linux-i386-3.7/Bio/motifs/_pwm.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/motifs/_pwm.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-i386-3.7/Bio/Cluster i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Cluster/cluster.c -o build/temp.linux-i386-3.7/Bio/Cluster/cluster.o i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Cluster/clustermodule.c -o build/temp.linux-i386-3.7/Bio/Cluster/clustermodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/Cluster/cluster.o build/temp.linux-i386-3.7/Bio/Cluster/clustermodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so building 'Bio.PDB.kdtrees' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/PDB/kdtrees.c -o build/temp.linux-i386-3.7/Bio/PDB/kdtrees.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/PDB/kdtrees.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-i386-3.7/Bio/KDTree i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/KDTree/KDTree.c -o build/temp.linux-i386-3.7/Bio/KDTree/KDTree.o i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-i386-3.7/Bio/KDTree/KDTreemodule.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/KDTree/KDTree.o build/temp.linux-i386-3.7/Bio/KDTree/KDTreemodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so building 'Bio.trie' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python3.7m -c Bio/triemodule.c -o build/temp.linux-i386-3.7/Bio/triemodule.o Bio/triemodule.c:585:5: warning: initialization of ‘Py_hash_t (*)(PyObject *)’ {aka ‘int (*)(struct _object *)’} from incompatible pointer type ‘long int (*)(PyObject *)’ {aka ‘long int (*)(struct _object *)’} [-Wincompatible-pointer-types] trie_nohash, /*tp_hash */ ^~~~~~~~~~~ Bio/triemodule.c:585:5: note: (near initialization for ‘Trie_Type.tp_hash’) i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python3.7m -c Bio/trie.c -o build/temp.linux-i386-3.7/Bio/trie.o i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/Bio/triemodule.o build/temp.linux-i386-3.7/Bio/trie.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.cpython-37m-i386-linux-gnu.so cd Doc && make make[2]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc' hevea -fix Tutorial.tex Exclude comment 'comment' ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_introduction.tex:250: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:converting-alignments' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:advanced' ./Tutorial/chapter_quick_start.tex:19: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:35: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:49: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_quick_start.tex:76: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:83: Warning: Undefined label: 'sec:connecting-with-biological-databases' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_quick_start.tex:154: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:162: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:163: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:48: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:131: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seq_annot.tex:133: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:158: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:216: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:229: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:279: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:288: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fastq-conversion' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fasta-qual-conversion' ./Tutorial/chapter_seqio.tex:1154: Warning: Undefined label: 'sec:seq-reverse-complement' ./Tutorial/chapter_seqio.tex:1164: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_seqio.tex:1205: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seqio.tex:1224: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seqio.tex:1303: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_align.tex:31: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:35: Warning: Undefined label: 'sec:AlignIO-count-argument' ./Tutorial/chapter_align.tex:115: Warning: Undefined label: 'sec:alignment-format-method' ./Tutorial/chapter_align.tex:445: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_align.tex:617: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_align.tex:792: Warning: Undefined label: 'sec:SeqRecord-addition' ./Tutorial/chapter_align.tex:844: Warning: Undefined label: 'sec:pairwise2' ./Tutorial/chapter_align.tex:849: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_align.tex:876: Warning: Undefined label: 'seq:emboss-needle-water' ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1023: Warning: Undefined label: 'sec:Phylo' ./Tutorial/chapter_align.tex:1245: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:1550: Warning: Undefined citation: 'durbin1998' ./Tutorial/chapter_align.tex:1562: Warning: Undefined label: 'sec:pairwise-aligner' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-matchscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1645: Warning: Undefined label: 'sec:pairwise-basic' ./Tutorial/chapter_align.tex:1648: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1649: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1855: Warning: Undefined label: 'sec:pairwise-examples' ./Tutorial/chapter_align.tex:1982: Warning: Undefined citation: 'kent2002' ./Tutorial/chapter_blast.tex:18: Warning: Undefined label: 'chapter:searchio' ./Tutorial/chapter_blast.tex:58: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:119: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:124: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:146: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:155: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:164: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:192: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_blast.tex:236: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_blast.tex:282: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:284: Warning: Undefined label: 'sec:running-local-blast' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_blast.tex:445: Warning: Undefined label: 'fig:blastrecord' ./Tutorial/chapter_blast.tex:461: Warning: Undefined label: 'fig:psiblastrecord' ./Tutorial/chapter_searchio.tex:734: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_searchio.tex:1082: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_entrez.tex:22: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:57: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:60: Warning: Undefined label: 'sec:BioSQL' ./Tutorial/chapter_entrez.tex:209: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:213: Warning: Undefined label: 'sec:entrez-einfo' ./Tutorial/chapter_entrez.tex:227: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:289: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:408: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:467: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:469: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:550: Warning: Undefined label: 'sec:elink-citations' ./Tutorial/chapter_entrez.tex:556: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:884: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1042: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1083: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1128: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1180: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1215: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1222: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:1223: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1275: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:1299: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_entrez.tex:1300: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1358: Warning: Undefined label: 'sec:entrez-search-fetch-genbank' ./Tutorial/chapter_entrez.tex:1389: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:1487: Warning: Undefined label: 'subsec:entrez-and-medline' ./Tutorial/chapter_entrez.tex:1492: Warning: Undefined label: 'sec:elink' ./Tutorial/chapter_entrez.tex:1516: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:10: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:41: Warning: Undefined label: 'subsec:expasy_swissprot' ./Tutorial/chapter_uniprot.tex:49: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:347: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_pdb.tex:18: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:207: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:216: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:353: Warning: Undefined label: 'hetero problems' ./Tutorial/chapter_pdb.tex:398: Warning: Undefined label: 'point mutations' ./Tutorial/chapter_pdb.tex:415: Warning: Undefined label: 'disordered atoms' ./Tutorial/chapter_pdb.tex:540: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:586: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:870: Warning: Undefined citation: 'golub1989' ./Tutorial/chapter_pdb.tex:898: Warning: Undefined citation: 'hamelryck2005' ./Tutorial/chapter_pdb.tex:933: Warning: Undefined label: 'cap:DSSP-codes' ./Tutorial/chapter_pdb.tex:972: Warning: Undefined label: 'subsec:residue_depth' ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1022: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_pdb.tex:1234: Warning: Undefined citation: 'hamelryck2003b' ./Tutorial/chapter_pdb.tex:1235: Warning: Undefined citation: 'majumdar2005' ./Tutorial/chapter_phylo.tex:9: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_phylo.tex:96: Warning: Undefined label: 'fig:phylo-simple-draw' ./Tutorial/chapter_phylo.tex:192: Warning: Undefined label: 'fig:phylo-color-draw' ./Tutorial/chapter_phylo.tex:376: Warning: Undefined label: 'fig:phylo-dot' ./Tutorial/chapter_phylo.tex:412: Warning: Undefined label: 'fig:phylo-rooted' ./Tutorial/chapter_phylo.tex:428: Warning: Undefined label: 'fig:phylo-color' ./Tutorial/chapter_phylo.tex:832: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_phylo.tex:903: Warning: Undefined label: 'sec:PhyloXML' ./Tutorial/chapter_motifs.tex:7: Warning: Undefined label: 'sec:links' ./Tutorial/chapter_motifs.tex:152: Warning: Undefined citation: 'cornish1985' ./Tutorial/chapter_motifs.tex:153: Warning: Undefined citation: 'cavener1987' ./Tutorial/chapter_motifs.tex:522: Warning: Undefined citation: 'bailey1994' ./Tutorial/chapter_motifs.tex:658: Warning: Undefined citation: 'matys2003' ./Tutorial/chapter_motifs.tex:733: Warning: Undefined label: 'table:transfaccodes' ./Tutorial/chapter_cluster.tex:5: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'lecuyer1988' ./Tutorial/chapter_cluster.tex:29: 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./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:284: Warning: Undefined label: 'sec:LogisticRegression' ./Tutorial/chapter_learning.tex:288: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:296: Warning: Undefined label: 'subsec:LogisticRegressionTraining' ./Tutorial/chapter_graphics.tex:18: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_graphics.tex:28: Warning: Undefined citation: 'toth2006' ./Tutorial/chapter_graphics.tex:31: Warning: Undefined citation: 'vanderauwera2009' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:64: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:206: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:320: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:467: Warning: Undefined label: 'sec:gd_top_down' ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:562: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:571: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_graphics.tex:574: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_graphics.tex:576: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode 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./Tutorial/chapter_cookbook.tex:415: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:429: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:449: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_cookbook.tex:597: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:600: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_cookbook.tex:750: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:772: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:774: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_cookbook.tex:788: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:855: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:967: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_cookbook.tex:984: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:1343: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1350: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1360: Warning: Undefined label: 'sec:consensus' ./Tutorial/chapter_cookbook.tex:1361: Warning: Undefined label: 'sec:pssm' ./Tutorial/chapter_cookbook.tex:1362: Warning: Undefined label: 'sec:getting_info_content' ./Tutorial/chapter_cookbook.tex:1363: Warning: Undefined label: 'sec:sub_matrix' ./Tutorial/chapter_cookbook.tex:1369: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1497: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1516: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1701: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:49: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:409: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_advanced.tex:163: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:31: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:84: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_contributing.tex:100: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_appendix.tex:88: Warning: Undefined label: 'sec:SeqIO_compressed' HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' 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occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode Fixpoint reached in 3 step(s) hevea -fix -text Tutorial.tex Exclude comment 'comment' 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math mode ./Tutorial/chapter_contributing.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:79: Warning: '_' occurring outside math mode ./Tutorial.tex:122: Warning: line too long ./Tutorial.tex:133: Warning: Application of '\'' on 'e' failed ./Tutorial.tex:133: Warning: Application of '\'' on 'o' failed ./Tutorial.tex:137: Warning: Application of '\"' on 'u' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'o' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'u' failed HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial.tex:68: Warning: tt_mode is an empty style ./Tutorial.haux:527: Giving up command: \@hevea@cbrace ./Tutorial.tex:68: Giving up command: \input ./Tutorial.tex:68: Warning: Failure while reading .haux ./Tutorial.tex:95: Warning: Application of '\'' on 'n' failed ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' 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./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:394: Warning: Command not found: \downarrow ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' 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Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:534: Warning: line too long ./Tutorial/chapter_seq_annot.tex:543: Warning: line too long ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:657: Warning: line too long ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:699: Warning: line too long ./Tutorial/chapter_seq_annot.tex:758: Warning: line too long ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:926: Warning: line too long ./Tutorial/chapter_seq_annot.tex:956: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:148: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:195: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:241: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:771: Warning: line too long ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1009: Warning: line too long ./Tutorial/chapter_seqio.tex:1016: Warning: line too long ./Tutorial/chapter_seqio.tex:1021: Warning: line too long ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' 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entity: U+00B7 ./Tutorial/chapter_cluster.tex:610: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:641: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:654: Warning: Undefined citation: 'yeung2001' ./Tutorial/chapter_cluster.tex:662: Warning: Undefined citation: 'golub1971' ./Tutorial/chapter_cluster.tex:706: Warning: line too long ./Tutorial/chapter_cluster.tex:714: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: overfull line in array : array too wide ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:803: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:806: Warning: Undefined label: 'subsec:distancematrix' ./Tutorial/chapter_cluster.tex:824: Warning: Undefined label: 'subsec:clustercentroids' ./Tutorial/chapter_cluster.tex:847: Warning: Undefined label: 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mode ./Tutorial/chapter_cookbook.tex:1350: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1360: Warning: Undefined label: 'sec:consensus' ./Tutorial/chapter_cookbook.tex:1361: Warning: Undefined label: 'sec:pssm' ./Tutorial/chapter_cookbook.tex:1362: Warning: Undefined label: 'sec:getting_info_content' ./Tutorial/chapter_cookbook.tex:1363: Warning: Undefined label: 'sec:sub_matrix' ./Tutorial/chapter_cookbook.tex:1369: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1497: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1516: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode 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Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial.tex:68: Warning: tt_mode is an empty style ./Tutorial.haux:527: Giving up command: \@hevea@cbrace ./Tutorial.tex:68: Giving up command: \input ./Tutorial.tex:68: Warning: Failure while reading .haux ./Tutorial.tex:95: Warning: Application of '\'' on 'n' failed ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_introduction.tex:250: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:converting-alignments' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:advanced' ./Tutorial/chapter_quick_start.tex:19: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:35: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:49: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_quick_start.tex:76: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:83: Warning: Undefined label: 'sec:connecting-with-biological-databases' ./Tutorial/chapter_quick_start.tex:88: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:123: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_quick_start.tex:154: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:162: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:163: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:394: Warning: Command not found: \downarrow ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' 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Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:534: Warning: line too long ./Tutorial/chapter_seq_annot.tex:543: Warning: line too long ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:657: Warning: line too long ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:699: Warning: line too long ./Tutorial/chapter_seq_annot.tex:758: Warning: line too long ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:926: Warning: line too long ./Tutorial/chapter_seq_annot.tex:956: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:148: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:195: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:241: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:771: Warning: line too long ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1009: Warning: line too long ./Tutorial/chapter_seqio.tex:1016: Warning: line too long ./Tutorial/chapter_seqio.tex:1021: Warning: line too long ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1106: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fastq-conversion' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fasta-qual-conversion' ./Tutorial/chapter_seqio.tex:1154: Warning: Undefined label: 'sec:seq-reverse-complement' ./Tutorial/chapter_seqio.tex:1164: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_seqio.tex:1205: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seqio.tex:1224: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seqio.tex:1303: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: 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'sec:appendix-handles' ./Tutorial/chapter_align.tex:1458: Warning: line too long ./Tutorial/chapter_align.tex:1459: Warning: line too long ./Tutorial/chapter_align.tex:1460: Warning: line too long ./Tutorial/chapter_align.tex:1550: Warning: Undefined citation: 'durbin1998' ./Tutorial/chapter_align.tex:1562: Warning: Undefined label: 'sec:pairwise-aligner' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-matchscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1645: Warning: Undefined label: 'sec:pairwise-basic' ./Tutorial/chapter_align.tex:1648: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1649: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1812: Warning: overfull line in array : array too wide ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1855: Warning: Undefined label: 'sec:pairwise-examples' ./Tutorial/chapter_align.tex:1982: Warning: Undefined citation: 'kent2002' ./Tutorial/chapter_align.tex:1986: Warning: line too long ./Tutorial/chapter_align.tex:2035: Warning: line too long ./Tutorial/chapter_align.tex:2036: Warning: line too long ./Tutorial/chapter_align.tex:2037: Warning: line too long ./Tutorial/chapter_align.tex:2070: Warning: line too long ./Tutorial/chapter_align.tex:2072: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:18: Warning: Undefined label: 'chapter:searchio' ./Tutorial/chapter_blast.tex:58: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:119: Warning: Undefined label: 'chapter:Bio.SeqIO' 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./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_blast.tex:433: Warning: line too long ./Tutorial/chapter_blast.tex:435: Warning: line too long ./Tutorial/chapter_blast.tex:445: Warning: Undefined label: 'fig:blastrecord' ./Tutorial/chapter_blast.tex:449: Warning: Image in text ./Tutorial/chapter_blast.tex:461: Warning: Undefined label: 'fig:psiblastrecord' ./Tutorial/chapter_blast.tex:465: Warning: Image in text ./Tutorial/chapter_searchio.tex:1: Warning: line too long ./Tutorial/chapter_searchio.tex:29: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:31: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:696: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:728: Warning: line too long ./Tutorial/chapter_searchio.tex:730: Warning: line too long ./Tutorial/chapter_searchio.tex:734: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_searchio.tex:883: 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./Tutorial/chapter_entrez.tex:1358: Warning: Undefined label: 'sec:entrez-search-fetch-genbank' ./Tutorial/chapter_entrez.tex:1389: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:1487: Warning: Undefined label: 'subsec:entrez-and-medline' ./Tutorial/chapter_entrez.tex:1492: Warning: Undefined label: 'sec:elink' ./Tutorial/chapter_entrez.tex:1516: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_uniprot.tex:1: Warning: line too long ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:10: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:29: Warning: line too long ./Tutorial/chapter_uniprot.tex:38: Warning: line too long ./Tutorial/chapter_uniprot.tex:41: Warning: Undefined label: 'subsec:expasy_swissprot' ./Tutorial/chapter_uniprot.tex:49: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:84: 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./Tutorial/chapter_pdb.tex:415: Warning: Undefined label: 'disordered atoms' ./Tutorial/chapter_pdb.tex:540: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:586: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:870: Warning: Undefined citation: 'golub1989' ./Tutorial/chapter_pdb.tex:898: Warning: Undefined citation: 'hamelryck2005' ./Tutorial/chapter_pdb.tex:933: Warning: Undefined label: 'cap:DSSP-codes' ./Tutorial/chapter_pdb.tex:972: Warning: Undefined label: 'subsec:residue_depth' ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1022: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_pdb.tex:1234: Warning: Undefined citation: 'hamelryck2003b' ./Tutorial/chapter_pdb.tex:1235: Warning: Undefined citation: 'majumdar2005' ./Tutorial/chapter_phylo.tex:9: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_phylo.tex:96: Warning: Undefined label: 'fig:phylo-simple-draw' ./Tutorial/chapter_phylo.tex:104: Warning: Image in text ./Tutorial/chapter_phylo.tex:192: Warning: Undefined label: 'fig:phylo-color-draw' ./Tutorial/chapter_phylo.tex:199: Warning: Image in text ./Tutorial/chapter_phylo.tex:345: Warning: line too long ./Tutorial/chapter_phylo.tex:359: Warning: Image in text ./Tutorial/chapter_phylo.tex:376: Warning: Undefined label: 'fig:phylo-dot' ./Tutorial/chapter_phylo.tex:387: Warning: Image in text ./Tutorial/chapter_phylo.tex:412: Warning: Undefined label: 'fig:phylo-rooted' ./Tutorial/chapter_phylo.tex:421: Warning: Image in text ./Tutorial/chapter_phylo.tex:428: Warning: Undefined label: 'fig:phylo-color' ./Tutorial/chapter_phylo.tex:454: Warning: Image in text ./Tutorial/chapter_phylo.tex:471: Warning: Image in text ./Tutorial/chapter_phylo.tex:473: Warning: Image in text ./Tutorial/chapter_phylo.tex:832: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_phylo.tex:903: Warning: Undefined label: 'sec:PhyloXML' ./Tutorial/chapter_motifs.tex:1: Warning: line too long ./Tutorial/chapter_motifs.tex:7: Warning: Undefined label: 'sec:links' ./Tutorial/chapter_motifs.tex:152: Warning: Undefined citation: 'cornish1985' ./Tutorial/chapter_motifs.tex:153: Warning: Undefined citation: 'cavener1987' ./Tutorial/chapter_motifs.tex:522: Warning: Undefined citation: 'bailey1994' ./Tutorial/chapter_motifs.tex:530: Warning: line too long ./Tutorial/chapter_motifs.tex:532: Warning: line too long ./Tutorial/chapter_motifs.tex:538: Warning: line too long ./Tutorial/chapter_motifs.tex:540: Warning: line too long ./Tutorial/chapter_motifs.tex:549: Warning: line too long ./Tutorial/chapter_motifs.tex:553: Warning: line too long ./Tutorial/chapter_motifs.tex:555: Warning: line too long ./Tutorial/chapter_motifs.tex:564: Warning: line too long ./Tutorial/chapter_motifs.tex:566: Warning: line too long ./Tutorial/chapter_motifs.tex:567: Warning: line too long ./Tutorial/chapter_motifs.tex:569: Warning: line too long ./Tutorial/chapter_motifs.tex:658: Warning: Undefined citation: 'matys2003' ./Tutorial/chapter_motifs.tex:733: Warning: Undefined label: 'table:transfaccodes' ./Tutorial/chapter_motifs.tex:1496: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1498: Warning: '_' occurring outside math mode ./Tutorial/chapter_cluster.tex:5: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'lecuyer1988' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'kachitvichyanukul1988' ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:153: Warning: Undefined citation: 'snedecor1989' ./Tutorial/chapter_cluster.tex:182: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:263: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:331: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:546: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'kohonen1997' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'tamayo1999' ./Tutorial/chapter_cluster.tex:601: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:605: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:610: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:641: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:654: Warning: Undefined citation: 'yeung2001' ./Tutorial/chapter_cluster.tex:662: Warning: Undefined citation: 'golub1971' ./Tutorial/chapter_cluster.tex:706: Warning: line too long ./Tutorial/chapter_cluster.tex:714: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: overfull line in array : array too wide ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:803: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:806: Warning: Undefined label: 'subsec:distancematrix' ./Tutorial/chapter_cluster.tex:824: Warning: Undefined label: 'subsec:clustercentroids' ./Tutorial/chapter_cluster.tex:847: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:872: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:901: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:923: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:955: Warning: Undefined citation: 'hihara2001' ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:69: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:74: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:284: Warning: Undefined label: 'sec:LogisticRegression' ./Tutorial/chapter_learning.tex:288: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:296: Warning: Undefined label: 'subsec:LogisticRegressionTraining' ./Tutorial/chapter_learning.tex:406: Warning: Application of '\"' on 'i' failed ./Tutorial/chapter_graphics.tex:18: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_graphics.tex:28: Warning: Undefined citation: 'toth2006' ./Tutorial/chapter_graphics.tex:31: Warning: 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occurring outside math mode ./Tutorial/chapter_graphics.tex:206: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: Image in text ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:320: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:371: Warning: Image in text ./Tutorial/chapter_graphics.tex:371: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: Image in text ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: Image in text ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:467: Warning: Undefined label: 'sec:gd_top_down' ./Tutorial/chapter_graphics.tex:530: Warning: Image in text 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mode ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:678: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: Image in text ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode 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./Tutorial/chapter_contributing.tex:79: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:84: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_contributing.tex:100: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_appendix.tex:88: Warning: Undefined label: 'sec:SeqIO_compressed' ./Tutorial.tex:122: Warning: line too long ./Tutorial.tex:133: Warning: Application of '\'' on 'e' failed ./Tutorial.tex:133: Warning: Application of '\'' on 'o' failed ./Tutorial.tex:137: Warning: Application of '\"' on 'u' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'o' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'u' failed Fixpoint reached in 3 step(s) pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document 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(/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [2] LaTeX Warning: Citation `cock2009' on page 3 undefined on input line 110. [3] LaTeX Warning: Citation `chapman2000' on page 4 undefined on input line 114. LaTeX Warning: Citation `hamelryck2003a' on page 4 undefined on input line 115. LaTeX Warning: Citation `dehoon2004' on page 4 undefined on input line 116. LaTeX Warning: Citation `pritchard2006' on page 4 undefined on input line 117. LaTeX Warning: Citation `talevich2012' on page 4 undefined on input line 118. LaTeX Warning: Citation `cock2010' on page 4 undefined on input line 119. Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [4 <./images/biopython_logo_old.jpg>] LaTeX Warning: Reference `sec:seq-comparison' on page 5 undefined on input line 237. [5] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . LaTeX Warning: Reference `sec:appendix-handles' on page 6 undefined on input li ne 250. [6] LaTeX Warning: Reference `sec:SeqIO-conversion' on page 7 undefined on input li ne 292. LaTeX Warning: Reference `sec:converting-alignments' on page 7 undefined on inp ut line 292. ) [7] (./Tutorial/chapter_quick_start.tex Chapter 2. LaTeX Warning: Reference `chapter:cookbook' on page 8 undefined on input line 1 4. LaTeX Warning: Reference `chapter:advanced' on page 8 undefined on input line 1 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 8 undefined on input line 19 . [8] LaTeX Warning: Reference `chapter:Bio.Seq' on page 9 undefined on input line 35 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 9 undefined on input line 49. LaTeX Warning: Reference `sec:sequence-parsing' on page 9 undefined on input li ne 69. LaTeX Warning: Reference `chapter:entrez' on page 9 undefined on input line 69. LaTeX Warning: Reference `chapter:swiss_prot' on page 9 undefined on input line 69. LaTeX Warning: Reference `sec:align_clustal' on page 9 undefined on input line 69. [9] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 10 undefined on input line 76. LaTeX Warning: Reference `sec:connecting-with-biological-databases' on page 10 undefined on input line 83. Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [10] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 11 undefined on input line 149. LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 11 undefined on input li ne 149. LaTeX Warning: Reference `chapter:cookbook' on page 11 undefined on input line 154. LaTeX Warning: Reference `chapter:entrez' on page 11 undefined on input line 16 2. LaTeX Warning: Reference `chapter:swiss_prot' on page 11 undefined on input lin e 163. [11] LaTeX Warning: Reference `chapter:cookbook' on page 12 undefined on input line 173. ) [12] (./Tutorial/chapter_seq_objects.tex Chapter 3. LaTeX Warning: Reference `chapter:SeqRecord' on page 13 undefined on input line 5. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 13 undefined on input line 5. [13] [14] LaTeX Warning: Reference `sec:mutable-seq' on page 15 undefined on input line 1 37. [15] LaTeX Warning: Reference `sec:SeqRecord-format' on page 16 undefined on input l ine 207. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 16 undefined on input line 209. [16] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [17] [18] LaTeX Warning: Reference `sec:SeqIO-reverse-complement' on page 19 undefined on input line 376. [19] LaTeX Warning: Reference `sec:seq-module-functions' on page 20 undefined on inp ut line 449. [20] [21] LaTeX Warning: Reference `sec:SeqIO-translate' on page 22 undefined on input li ne 564. LaTeX Warning: Reference `sec:seq-module-functions' on page 22 undefined on inp ut line 570. [22] [23] LaTeX Warning: Reference `sec:seq-to-string' on page 24 undefined on input line 719. [24] LaTeX Warning: Reference `sec:seq-to-string' on page 25 undefined on input line 810. [25] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 26 undefined on input line 871. [26]) [27] (./Tutorial/chapter_seq_annot.tex Chapter 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 28 undefined on input line 4 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 28 undefined on input line 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 28 undefined on input line 2 1. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 28 undefined on input line 21. LaTeX Warning: Reference `sec:FASTQ-filtering-example' on page 28 undefined on input line 34. [28] LaTeX Warning: Reference `sec:seq_features' on page 29 undefined on input line 38. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 29 undefined on input line 48. [29] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] LaTeX Warning: Reference `chapter:quick-start' on page 30 undefined on input li ne 131. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 30 undefined on input line 133. Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 30 undefined on input line 158. Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [30] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 31 undefined on input line 216. Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 31 undefined on input line 229. [31] LaTeX Warning: Reference `sec:seq_features' on page 32 undefined on input line 279. LaTeX Warning: Reference `sec:locations' on page 32 undefined on input line 288 . LaTeX Warning: Reference `sec:locations' on page 32 undefined on input line 296 . [32] [33] [34] [35] LaTeX Warning: Reference `sec:locations' on page 36 undefined on input line 528 . Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [36] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] LaTeX Warning: Reference `sec:seq-comparison' on page 37 undefined on input lin e 632. LaTeX Warning: Reference `sec:locations' on page 37 undefined on input line 640 . [37] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 38 undefined on input line 676. LaTeX Warning: Reference `sec:Bio.SeqIO-and-StringIO' on page 38 undefined on i nput line 679. Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [38] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [39] LaTeX Warning: Reference `sec:SeqRecord-format' on page 40 undefined on input l ine 833. Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] LaTeX Warning: Reference `sec:FASTQ-slicing-off-primer' on page 40 undefined on input line 841. LaTeX Warning: Reference `sec:FASTQ-slicing-off-adaptor' on page 40 undefined o n input line 842. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 40 undefined on input line 855. [40] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [41] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [42] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [43] (./Tutorial/chapter_seqio.tex Chapter 5. LaTeX Warning: Reference `chapter:quick-start' on page 44 undefined on input li ne 4. LaTeX Warning: Reference `chapter:SeqRecord' on page 44 undefined on input line 4. LaTeX Warning: Reference `chapter:SeqRecord' on page 44 undefined on input line 13. LaTeX Warning: Reference `chapter:Bio.Seq' on page 44 undefined on input line 1 3. LaTeX Warning: Reference `sec:low-level-fasta-fastq' on page 44 undefined on in put line 15. LaTeX Warning: Reference `sec:SeqIO_Online' on page 44 undefined on input line 23. LaTeX Warning: Reference `sec:appendix-handles' on page 44 undefined on input l ine 23. [44] LaTeX Warning: Reference `sec:sequence-parsing' on page 45 undefined on input l ine 45. Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] LaTeX Warning: Reference `seq:sequence-parsing-plus-pylab' on page 45 undefined on input line 69. [45] [46] LaTeX Warning: Reference `chapter:SeqRecord' on page 47 undefined on input line 148. [47] [48] LaTeX Warning: Reference `sec:appendix-handles' on page 49 undefined on input l ine 283. [49] LaTeX Warning: Reference `sec:SeqIO-index-bgzf' on page 50 undefined on input l ine 359. LaTeX Warning: Reference `sec:efetch' on page 50 undefined on input line 375. Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [50] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] LaTeX Warning: Reference `chapter:entrez' on page 51 undefined on input line 45 1. LaTeX Warning: Reference `sec:entrez-guidelines' on page 51 undefined on input line 451. LaTeX Warning: Reference `chapter:swiss_prot' on page 51 undefined on input lin e 456. Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [51] LaTeX Warning: Reference `SeqIO:to_dict' on page 52 undefined on input line 491 . LaTeX Warning: Reference `sec:SeqIO-index' on page 52 undefined on input line 4 97. LaTeX Warning: Reference `sec:SeqIO-index-db' on page 52 undefined on input lin e 501. LaTeX Warning: Reference `sec:SeqIO-indexing-discussion' on page 52 undefined o n input line 504. LaTeX Warning: Reference `sec:SeqIO-index' on page 52 undefined on input line 5 14. [52] LaTeX Warning: Reference `sec:fasta-parsing' on page 53 undefined on input line 588. Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [53] [54] LaTeX Warning: Reference `sec:fastq-indexing' on page 55 undefined on input lin e 704. LaTeX Warning: Reference `seq:seqio-todict-functionkey' on page 55 undefined on input line 725. Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [55] LaTeX Warning: Reference `sec:SeqIO-sort' on page 56 undefined on input line 78 7. Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [56] LaTeX Warning: Reference `sec:seqio-index-getraw' on page 57 undefined on input line 869. [57] [58] [59] LaTeX Warning: Reference `sec:seqio-index-getraw' on page 60 undefined on input line 1097. [60] LaTeX Warning: Reference `sec:SeqIO-fastq-conversion' on page 61 undefined on i nput line 1139. LaTeX Warning: Reference `sec:SeqIO-fasta-qual-conversion' on page 61 undefined on input line 1139. LaTeX Warning: Reference `sec:seq-reverse-complement' on page 61 undefined on i nput line 1154. LaTeX Warning: Reference `sec:SeqRecord-reverse-complement' on page 61 undefine d on input line 1164. Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [61] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] LaTeX Warning: Reference `sec:SeqIO-translate' on page 62 undefined on input li ne 1205. LaTeX Warning: Reference `sec:SeqRecord-format' on page 62 undefined on input l ine 1224. Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [62] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator LaTeX Warning: Reference `chapter:cookbook' on page 63 undefined on input line 1303. ) [63] (./Tutorial/chapter_align.tex Chapter 6. LaTeX Warning: Reference `sec:appendix-handles' on page 64 undefined on input l ine 31. LaTeX Warning: Reference `sec:AlignIO-count-argument' on page 64 undefined on i nput line 35. [64] [65] LaTeX Warning: Reference `sec:alignment-format-method' on page 66 undefined on input line 115. [66] [67] [68] [69] [70] [71] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() LaTeX Warning: Reference `sec:SeqIO-conversion' on page 72 undefined on input l ine 445. Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [72] [73] [74] LaTeX Warning: Reference `sec:SeqRecord-format' on page 75 undefined on input l ine 617. Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [75] [76] LaTeX Warning: Reference `sec:SeqRecord-addition' on page 77 undefined on input line 792. [77] LaTeX Warning: Reference `sec:pairwise2' on page 78 undefined on input line 844 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 78 undefined on input line 849. LaTeX Warning: Reference `seq:emboss-needle-water' on page 78 undefined on inpu t line 876. [78] [79] LaTeX Warning: Reference `sec:Phylo' on page 80 undefined on input line 1023. [80] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [81] [82] LaTeX Warning: Reference `sec:appendix-handles' on page 83 undefined on input l ine 1245. [83] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [84] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [85] [86] LaTeX Warning: Citation `durbin1998' on page 87 undefined on input line 1550. [87] LaTeX Warning: Reference `sec:pairwise-aligner' on page 88 undefined on input l ine 1562. [88] LaTeX Warning: Reference `sec:pairwise-matchscores' on page 89 undefined on inp ut line 1644. LaTeX Warning: Reference `sec:pairwise-affine-gapscores' on page 89 undefined o n input line 1644. LaTeX Warning: Reference `sec:pairwise-general-gapscores' on page 89 undefined on input line 1644. LaTeX Warning: Reference `sec:pairwise-basic' on page 89 undefined on input lin e 1645. LaTeX Warning: Reference `sec:pairwise-affine-gapscores' on page 89 undefined o n input line 1648. LaTeX Warning: Reference `sec:pairwise-general-gapscores' on page 89 undefined on input line 1649. [89] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [90] [91] [92] LaTeX Warning: Reference `sec:pairwise-examples' on page 93 undefined on input line 1855. [93] [94] LaTeX Warning: Citation `kent2002' on page 95 undefined on input line 1982. Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [95] [96]) [97] (./Tutorial/chapter_blast.tex Chapter 7. LaTeX Warning: Reference `chapter:searchio' on page 98 undefined on input line 18. [98] LaTeX Warning: Reference `sec:parsing-blast' on page 99 undefined on input line 58. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 99 undefined on input line 119. LaTeX Warning: Reference `sec:parsing-blast' on page 99 undefined on input line 124. [99] LaTeX Warning: Reference `sec:parsing-blast' on page 100 undefined on input lin e 146. LaTeX Warning: Reference `sec:parsing-blast' on page 100 undefined on input lin e 155. LaTeX Warning: Reference `sec:running-www-blast' on page 100 undefined on input line 164. LaTeX Warning: Reference `sec:alignment-tools' on page 100 undefined on input l ine 192. [100] LaTeX Warning: Reference `sec:parsing-blast' on page 101 undefined on input lin e 236. LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 101 undefined o n input line 268. LaTeX Warning: Reference `sec:running-www-blast' on page 101 undefined on input line 282. LaTeX Warning: Reference `sec:running-local-blast' on page 101 undefined on inp ut line 284. [101] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 102 undefined on input lin e 335. LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 102 undefined on input l ine 335. [102] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [103] LaTeX Warning: Reference `fig:blastrecord' on page 104 undefined on input line 445. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:psiblastrecord' on page 104 undefined on input li ne 461. Excluding 'htmlonly' comment.) [104] [105 <./images/BlastRecord.png>] [106 <./i mages/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [107] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [108] [109] [110] [111] [112] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [113] [114] [115] [116] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] LaTeX Warning: Reference `chapter:SeqRecord' on page 117 undefined on input lin e 734. Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [117] [118] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [119] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [120] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , LaTeX Warning: Reference `sec:SeqIO-index' on page 121 undefined on input line 1082. Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [121] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [122]) [123] (./Tutorial/chapter_entrez.tex Chapter 9. LaTeX Warning: Reference `sec:entrez-specialized-parsers' on page 124 undefined on input line 22. [124] LaTeX Warning: Reference `sec:entrez-webenv' on page 125 undefined on input lin e 57. LaTeX Warning: Reference `sec:BioSQL' on page 125 undefined on input line 60. [125] [126] [127] LaTeX Warning: Reference `sec:efetch' on page 128 undefined on input line 209. LaTeX Warning: Reference `sec:entrez-einfo' on page 128 undefined on input line 213. Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] LaTeX Warning: Reference `sec:efetch' on page 128 undefined on input line 227. [128] LaTeX Warning: Reference `sec:entrez-webenv' on page 129 undefined on input lin e 289. [129] LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 130 undefined on in put line 314. LaTeX Warning: Reference `sec:efetch' on page 130 undefined on input line 314. [130] [131] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 132 undefined on input lin e 408. Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [132] LaTeX Warning: Reference `sec:entrez-specialized-parsers' on page 133 undefined on input line 467. LaTeX Warning: Reference `sec:entrez-webenv' on page 133 undefined on input lin e 469. [133] LaTeX Warning: Reference `sec:elink-citations' on page 134 undefined on input l ine 550. LaTeX Warning: Reference `subsec:entrez_example_genbank' on page 134 undefined on input line 556. [134] [135] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [136] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [137] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 138 undefined on in put line 767. LaTeX Warning: Reference `sec:efetch' on page 138 undefined on input line 767. [138] [139] LaTeX Warning: Reference `sec:entrez-webenv' on page 140 undefined on input lin e 884. [140] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [141] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [142] LaTeX Warning: Reference `sec:orchids' on page 143 undefined on input line 1042 . LaTeX Warning: Reference `sec:entrez-webenv' on page 143 undefined on input lin e 1083. [143] LaTeX Warning: Reference `sec:orchids' on page 144 undefined on input line 1128 . Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [144] LaTeX Warning: Reference `sec:entrez-webenv' on page 145 undefined on input lin e 1180. [145] LaTeX Warning: Reference `sec:entrez-webenv' on page 146 undefined on input lin e 1215. LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 146 undefined on in put line 1222. LaTeX Warning: Reference `sec:entrez-webenv' on page 146 undefined on input lin e 1223. [146] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 147 undefined on input lin e 1275. LaTeX Warning: Reference `sec:entrez-guidelines' on page 147 undefined on input line 1299. LaTeX Warning: Reference `sec:entrez-webenv' on page 147 undefined on input lin e 1300. [147] LaTeX Warning: Reference `sec:entrez-search-fetch-genbank' on page 148 undefine d on input line 1358. [148] LaTeX Warning: Reference `subsec:entrez_example_genbank' on page 149 undefined on input line 1389. [149] LaTeX Warning: Reference `subsec:entrez-and-medline' on page 150 undefined on i nput line 1487. LaTeX Warning: Reference `sec:elink' on page 150 undefined on input line 1492. [150] LaTeX Warning: Reference `sec:entrez-webenv' on page 151 undefined on input lin e 1516. ) [151] (./Tutorial/chapter_uniprot.tex Chapter 10. LaTeX Warning: Reference `sec:SeqIO_ExPASy_and_SwissProt' on page 152 undefined on input line 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] LaTeX Warning: Reference `subsec:expasy_swissprot' on page 152 undefined on inp ut line 41. [152] LaTeX Warning: Reference `sec:SeqIO_ExPASy_and_SwissProt' on page 153 undefined on input line 49. Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [153] [154] [155] [156] [157] LaTeX Warning: Reference `sec:orchids' on page 158 undefined on input line 347. [158] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [159] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [160]) [161] (./Tutorial/chapter_pdb.tex Chapter 11. LaTeX Warning: Reference `problem structures' on page 162 undefined on input li ne 18. [162] [163] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [164] LaTeX Warning: Reference `fig:smcra' on page 165 undefined on input line 207. LaTeX Warning: Reference `problem structures' on page 165 undefined on input li ne 216. Excluding 'htmlonly' comment. [165] [166 <./images/smcra.png (PNG copy)>] [167] LaTeX Warning: Reference `hetero problems' on page 168 undefined on input line 353. LaTeX Warning: Reference `point mutations' on page 168 undefined on input line 398. LaTeX Warning: Reference `disordered atoms' on page 168 undefined on input line 415. [168] [169] LaTeX Warning: Reference `fig:smcra' on page 170 undefined on input line 540. [170] LaTeX Warning: Reference `fig:smcra' on page 171 undefined on input line 586. [171] [172] [173] [174] LaTeX Warning: Citation `golub1989' on page 175 undefined on input line 870. [175] LaTeX Warning: Citation `hamelryck2005' on page 176 undefined on input line 898 . LaTeX Warning: Command \r invalid in math mode on input line 901. LaTeX Warning: Reference `cap:DSSP-codes' on page 176 undefined on input line 9 33. LaTeX Warning: Reference `subsec:residue_depth' on page 176 undefined on input line 972. [176] LaTeX Warning: Citation `hamelryck2003a' on page 177 undefined on input line 10 22. [177] [178] [179] LaTeX Warning: Citation `hamelryck2003b' on page 180 undefined on input line 12 34. LaTeX Warning: Citation `majumdar2005' on page 180 undefined on input line 1235 . [180]) [181] (./Tutorial/chapter_popgen.tex Chapter 12. [182]) [183] (./Tutorial/chapter_phylo.tex Chapter 13. LaTeX Warning: Citation `talevich2012' on page 184 undefined on input line 9. [184] LaTeX Warning: Reference `fig:phylo-simple-draw' on page 185 undefined on input line 96. Excluding 'htmlonly' comment. [185] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor LaTeX Warning: Reference `fig:phylo-color-draw' on page 186 undefined on input line 192. [186 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [187 <./im ages/phylo-color-draw.png>] [188] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-dot' on page 189 undefined on input line 37 6. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-rooted' on page 189 undefined on input line 412. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-color' on page 189 undefined on input line 428. [189] [190 <./images/phylo-draw-example.png> <./images/phylo-dot.png>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-apaf' on page 191 undefined on input line 4 62. LaTeX Warning: Reference `fig:phylo-apaf-zoom' on page 191 undefined on input l ine 462. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-apaf' on page 191 undefined on input line 4 87. [191 <./images/phylo-rooted.png> <./images/phylo-color.png>] [192 <./images/phy lo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [193] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [194] [195] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- LaTeX Warning: Reference `sec:alignment-tools' on page 196 undefined on input l ine 832. [196] LaTeX Warning: Reference `sec:PhyloXML' on page 197 undefined on input line 903 . [197]) [198] (./Tutorial/chapter_motifs.tex Chapter 14. LaTeX Warning: Reference `sec:links' on page 199 undefined on input line 7. [199] [200] LaTeX Warning: Citation `cornish1985' on page 201 undefined on input line 152. LaTeX Warning: Citation `cavener1987' on page 201 undefined on input line 153. [201] [202] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [203] [204] [205] [206] [207] LaTeX Warning: Citation `bailey1994' on page 208 undefined on input line 522. [208] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [209] [210] LaTeX Warning: Citation `matys2003' on page 211 undefined on input line 658. [211] LaTeX Warning: Reference `table:transfaccodes' on page 212 undefined on input l ine 733. LaTeX Warning: `h' float specifier changed to `ht'. [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) [224] (./Tutorial/chapter_cluster.tex Chapter 15. LaTeX Warning: Citation `dehoon2004' on page 225 undefined on input line 5. LaTeX Warning: Citation `lecuyer1988' on page 225 undefined on input line 29. LaTeX Warning: Citation `kachitvichyanukul1988' on page 225 undefined on input line 29. [225] [226] [227] LaTeX Warning: Citation `snedecor1989' on page 228 undefined on input line 153. [228] LaTeX Warning: Reference `sec:distancefunctions' on page 229 undefined on input line 182. [229] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [230] LaTeX Warning: Reference `sec:distancefunctions' on page 231 undefined on input line 263. [231] [232] LaTeX Warning: Reference `sec:distancefunctions' on page 233 undefined on input line 331. [233] [234] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [235] [236] LaTeX Warning: Reference `sec:distancefunctions' on page 237 undefined on input line 546. [237] LaTeX Warning: Citation `kohonen1997' on page 238 undefined on input line 594. LaTeX Warning: Citation `tamayo1999' on page 238 undefined on input line 594. [238] [239] LaTeX Warning: Reference `sec:distancefunctions' on page 240 undefined on input line 641. Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ LaTeX Warning: Citation `yeung2001' on page 240 undefined on input line 654. LaTeX Warning: Citation `golub1971' on page 240 undefined on input line 662. 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[309 <./images/SRR001666.png>] [310] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [311] LaTeX Warning: Reference `sec:summary_info' on page 312 undefined on input line 1497. LaTeX Warning: Reference `sec:freq_table' on page 312 undefined on input line 1 516. [312] LaTeX Warning: Reference `sec:align_clustal' on page 313 undefined on input lin e 1603. LaTeX Warning: Reference `sec:summary_info' on page 313 undefined on input line 1603. [313] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 314 undefined on input lin e 1701. [314]) [315] (./Tutorial/chapter_testing.tex Chapter 21. LaTeX Warning: Reference `section:doctest' on page 316 undefined on input line 49. [316] [317] [318] [319] [320] [321] LaTeX Warning: Reference `section:doctest' on page 322 undefined on input line 409. 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (337 pages, 2428292 bytes). Transcript written on Tutorial.log. pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 65. 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Excluding 'rawhtml' comment. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.m ap} <./images/biopython_logo.pdf>] (./Tutorial.tocpdfTeX warning (ext4): destin ation with the same identifier (name{page.1}) has been already used, duplicate ignored \relax l.39 ...tions and locations}{33}{subsection.4.3.2} % [1] [2] [3] [4] [5] [6] [7]) [8] (./Tutorial/chapter_introduction.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [9] [10] Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [11 <./images/biopython_logo_old.jpg>] [12] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . [13]) [14] (./Tutorial/chapter_quick_start.tex Chapter 2. [15] [16] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [17] [18]) [19] (./Tutorial/chapter_seq_objects.tex Chapter 3. [20] [21] [22] [23] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33]) [34] (./Tutorial/chapter_seq_annot.tex Chapter 4. [35] [36] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [37] Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [38] [39] [40] [41] [42] Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [43] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] [44] Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [45] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [46] Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] [47] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [48] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [49] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [50] (./Tutorial/chapter_seqio.tex Chapter 5. [51] Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] [52] [53] [54] [55] [56] Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [57] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [58] [59] Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [60] [61] Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [62] Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [63] [64] [65] [66] [67] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [68] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [69] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator ) [70] (./Tutorial/chapter_align.tex Chapter 6. [71] [72] [73] [74] [75] [76] [77] [78] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [79] [80] [81] Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [82] [83] [84] [85] [86] [87] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [88] [89] [90] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [91] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [92] [93] [94] [95] [96] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [97] [98] [99] [100] [101] Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [102] [103]) [104] (./Tutorial/chapter_blast.tex Chapter 7. [105] [106] [107] LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 108 undefined o n input line 268. [108] [109] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [110] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment.) [111] [112 <./images/BlastRecord.png>] [113 <./images/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [114] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [115] [116] [117] [118] [119] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [120] [121] [122] [123] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [124] [125] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [126] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [127] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [128] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [129]) [130] (./Tutorial/chapter_entrez.tex Chapter 9. [131] [132] [133] [134] Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] [135] [136] [137] [138] Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [139] [140] [141] [142] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [143] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [144] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] [145] [146] [147] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [148] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [149] [150] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [151] [152] [153] [154] [155] [156] [157]) [158] (./Tutorial/chapter_uniprot.tex Chapter 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] [159] Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [160] [161] [162] [163] [164] [165] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [166] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [167]) [168] (./Tutorial/chapter_pdb.tex Chapter 11. [169] [170] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [171] Excluding 'htmlonly' comment. [172] [173 <./images/smcra.png (PNG copy)>] [174] [175] [176] [177] [178] [179] [180] [181] [182] LaTeX Warning: Command \r invalid in math mode on input line 901. [183] [184] [185] [186] [187]) [188] (./Tutorial/chapter_popgen.tex Chapter 12. [189]) [190] (./Tutorial/chapter_phylo.tex Chapter 13. [191] Excluding 'htmlonly' comment. [192] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor [193 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [194 <./im ages/phylo-color-draw.png>] [195] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [196] [197 <./images/phylo-draw-example.png> <./i mages/phylo-dot.png>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [198 <./images/phylo-rooted.png> <./images/phylo- color.png>] [199 <./images/phylo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [200] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [201] [202] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- [203] [204]) [205] (./Tutorial/chapter_motifs.tex Chapter 14. [206] [207] [208] [209] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [210] [211] [212] [213] [214] [215] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [216] [217] [218] LaTeX Warning: `h' float specifier changed to `ht'. [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230]) [231] (./Tutorial/chapter_cluster.tex Chapter 15. [232] [233] [234] [235] [236] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [237] [238] [239] [240] [241] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [242] [243] [244] [245] [246] Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [247] Overfull \hbox (175.98935pt too wide) in paragraph at lines 707--707 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserco ntent.com/biopython/biopython/master/Tests/Cluster/cyano.txt"))[] Overfull \hbox (97.24004pt too wide) in paragraph at lines 715--715 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/biop ython/biopython/master/Tests/Cluster/cyano.txt")[] [248] Overfull \hbox (25.39864pt too wide) in paragraph at lines 740--751 [] [249] [250] [251] [252] Overfull \hbox (106.77225pt too wide) in paragraph at lines 930--932 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [253]) Overfull \hbox (26.21434pt too wide) in paragraph at lines 986--111 []\OT1/cmr/m/n/10 This will cre-ate the files [][]\OT1/cmtt/m/n/10 cyano_result _K_G2_A2.cdt[]\OT1/cmr/m/n/10 , [][]\OT1/cmtt/m/n/10 cyano_result_K_G2.kgg[]\OT 1/cmr/m/n/10 , and [][]\OT1/cmtt/m/n/10 cyano_result_K_A2.kag[]\OT1/cmr/m/n/10 . [254] (./Tutorial/chapter_learning.tex Chapter 16. [255] [256] [257] [258] [259] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. [260] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. [261] [262]) [263] (./Tutorial/chapter_graphics.tex Chapter 17. [264] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [265] [266 <./images/plasmid_linear.png (PNG copy)> <./images/plasmid_circular.png (P NG copy)>] [267] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [268] [269 <./images/GD_sigil_labels.png (PNG copy)>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [270] [271 <./images/GD_sigils.png>] [272 <./imag es/GD_sigil_arrow_shafts.png>] Excluding 'htmlonly' comment. [273 <./images/GD_ sigil_arrow_heads.png>] [274] Excluding 'htmlonly' comment. [275 <./images/plas mid_linear_nice.png (PNG copy)>] [276 <./images/plasmid_circular_nice.png>] Overfull \hbox (2.74086pt too wide) in paragraph at lines 605--605 []\OT1/cmtt/m/n/10 A_colors = [red]*5 + [grey]*7 + [orange]*2 + [grey]*2 + [ora nge] + [grey]*11 + [green]*4 \[] [277] Excluding 'htmlonly' comment. [278 <./images/three_track_simple.png>] [279] Overfull \hbox (28.99063pt too wide) in paragraph at lines 782--782 [] \OT1/cmtt/m/n/10 color = colors.linearlyInterpolatedColor(colors.whit e, colors.firebrick, 0, 100, score)[] Overfull \hbox (2.65141pt too wide) in paragraph at lines 784--790 []\OT1/cmr/m/n/10 There are sev-eral im-por-tant pieces to this code. First the [][]\OT1/cmtt/m/n/10 GenomeDiagram []\OT1/cmr/m/n/10 ob-ject has a [][]\OT1/cm tt/m/n/10 cross_track_links Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [280] [281 <./image s/three_track_cl.png>] [282 <./images/three_track_cl2a.png>] [283] [284 <./imag es/simple_chrom.pdf> <./images/tRNA_chrom.pdf>] [285] Excluding 'htmlonly' comment. [286] Excluding 'htmlonly' comment.) [287] (./Tutorial/chapter_kegg.tex Chapter 18. [288] [289]) [290] (./Tutorial/chapter_phenotype.tex Chapter 19. [291] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['A12']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['B01'], WellReco rd['C01'], ..., WellRecord['H01']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['C03']')[] [292] [293] [294]) [295] (./Tutorial/chapter_cookbook.tex Chapter 20. [296] [297] [298] [299] [300] [301] Overfull \hbox (5.83499pt too wide) in paragraph at lines 426--430 \OT1/cmr/m/n/10 mat (e.g. FASTA files). How-ever, for large FASTQ files it woul d be faster the low-level [][]\OT1/cmtt/m/n/10 FastqGeneralIterator Overfull \hbox (4.57849pt too wide) in paragraph at lines 444--446 \OT1/cmr/m/n/10 That should find $13819$ reads from \OT1/cmtt/m/n/10 SRR014849. fastq \OT1/cmr/m/n/10 and save them to a new FASTQ file, \OT1/cmtt/m/n/10 with[ ]primer.fastq\OT1/cmr/m/n/10 . [302] [303] [304] [305] Overfull \hbox (7.99081pt too wide) in paragraph at lines 765--765 []\OT1/cmtt/m/n/10 Seq('GTCCCAGTATTCGGATTTGTCTGCCAAAACAATGAAATTGACACAGTTTACAAC. ..CCG', SingleLetterAlphabet())[] [306] [307] [308] [309] Excluding 'htmlonly' comment. Overfull \hbox (4.00363pt too wide) in paragraph at lines 1057--1060 []\OT1/cmr/m/it/10 Tip: \OT1/cmr/m/n/10 Rather than us-ing [][]\OT1/cmtt/m/n/10 pylab.show() []\OT1/cmr/m/n/10 to show the plot in a win-dow, you can also use [][]\OT1/cmtt/m/n/10 pylab.savefig(...) [310] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [311 <./image s/hist_plot.png>] [312 <./images/gc_plot.png>] Excluding 'htmlonly' comment. [313 <./images/dot_plot.png>] Excluding 'htmlonly' comment. [314] Excluding 'htmlonly' comment. [315 <./images/dot_plot_scatter.png>] [316 <./ima ges/SRR001666.png>] [317] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [318] [319] [320] [321]) [322] (./Tutorial/chapter_testing.tex Chapter 21. [323] [324] [325] [326] [327] [328] [329] (/usr/share/texlive/texmf-dist/tex/latex/base/omlcmr.fd)) [330] (./Tutorial/chapter_advanced.tex Chapter 22. [331] [332] Overfull \hbox (30.74179pt too wide) in paragraph at lines 198--199 [][][]\OT1/cmtt/m/n/10 factor[]\OT1/cmr/m/n/10 : fac-tor used to mul-ti-ply the log-odds val-ues. Each en-try is gen-er-ated by log(LOM[key])*factor [333] [334]) [335] (./Tutorial/chapter_contributing.tex Chapter 23. [336] [337]) [338] (./Tutorial/chapter_appendix.tex Chapter 24. [339]) [340] [341] [342] [343] (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (344 pages, 2486423 bytes). Transcript written on Tutorial.log. pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 65. 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Excluding 'rawhtml' comment. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.m ap} <./images/biopython_logo.pdf>] (./Tutorial.tocpdfTeX warning (ext4): destin ation with the same identifier (name{page.1}) has been already used, duplicate ignored \relax l.39 ...tions and locations}{40}{subsection.4.3.2} % [1] [2] [3] [4] [5] [6] [7]) [8] (./Tutorial/chapter_introduction.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [9] [10] Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [11 <./images/biopython_logo_old.jpg>] [12] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . [13]) [14] (./Tutorial/chapter_quick_start.tex Chapter 2. [15] [16] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [17] [18]) [19] (./Tutorial/chapter_seq_objects.tex Chapter 3. [20] [21] [22] [23] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33]) [34] (./Tutorial/chapter_seq_annot.tex Chapter 4. [35] [36] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [37] Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [38] [39] [40] [41] [42] Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [43] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] [44] Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [45] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [46] Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] [47] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [48] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [49] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [50] (./Tutorial/chapter_seqio.tex Chapter 5. [51] Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] [52] [53] [54] [55] [56] Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [57] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [58] [59] Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [60] [61] Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [62] Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [63] [64] [65] [66] [67] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [68] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [69] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator ) [70] (./Tutorial/chapter_align.tex Chapter 6. [71] [72] [73] [74] [75] [76] [77] [78] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [79] [80] [81] Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [82] [83] [84] [85] [86] [87] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [88] [89] [90] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [91] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [92] [93] [94] [95] [96] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [97] [98] [99] [100] [101] Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [102] [103]) [104] (./Tutorial/chapter_blast.tex Chapter 7. [105] [106] [107] LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 108 undefined o n input line 268. [108] [109] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [110] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment.) [111] [112 <./images/BlastRecord.png>] [113 <./images/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [114] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [115] [116] [117] [118] [119] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [120] [121] [122] [123] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [124] [125] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [126] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [127] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [128] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [129]) [130] (./Tutorial/chapter_entrez.tex Chapter 9. [131] [132] [133] [134] Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] [135] [136] [137] [138] Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [139] [140] [141] [142] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [143] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [144] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] [145] [146] [147] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [148] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [149] [150] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [151] [152] [153] [154] [155] [156] [157]) [158] (./Tutorial/chapter_uniprot.tex Chapter 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] [159] Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [160] [161] [162] [163] [164] [165] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [166] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [167]) [168] (./Tutorial/chapter_pdb.tex Chapter 11. [169] [170] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [171] Excluding 'htmlonly' comment. [172] [173 <./images/smcra.png (PNG copy)>] [174] [175] [176] [177] [178] [179] [180] [181] [182] LaTeX Warning: Command \r invalid in math mode on input line 901. [183] [184] [185] [186] [187]) [188] (./Tutorial/chapter_popgen.tex Chapter 12. [189]) [190] (./Tutorial/chapter_phylo.tex Chapter 13. [191] Excluding 'htmlonly' comment. [192] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor [193 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [194 <./im ages/phylo-color-draw.png>] [195] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [196] [197 <./images/phylo-draw-example.png> <./i mages/phylo-dot.png>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [198 <./images/phylo-rooted.png> <./images/phylo- color.png>] [199 <./images/phylo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [200] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [201] [202] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- [203] [204]) [205] (./Tutorial/chapter_motifs.tex Chapter 14. [206] [207] [208] [209] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [210] [211] [212] [213] [214] [215] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [216] [217] [218] LaTeX Warning: `h' float specifier changed to `ht'. [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230]) [231] (./Tutorial/chapter_cluster.tex Chapter 15. [232] [233] [234] [235] [236] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [237] [238] [239] [240] [241] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [242] [243] [244] [245] [246] Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [247] Overfull \hbox (175.98935pt too wide) in paragraph at lines 707--707 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserco ntent.com/biopython/biopython/master/Tests/Cluster/cyano.txt"))[] Overfull \hbox (97.24004pt too wide) in paragraph at lines 715--715 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/biop ython/biopython/master/Tests/Cluster/cyano.txt")[] [248] Overfull \hbox (25.39864pt too wide) in paragraph at lines 740--751 [] [249] [250] [251] [252] Overfull \hbox (106.77225pt too wide) in paragraph at lines 930--932 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [253]) Overfull \hbox (26.21434pt too wide) in paragraph at lines 986--111 []\OT1/cmr/m/n/10 This will cre-ate the files [][]\OT1/cmtt/m/n/10 cyano_result _K_G2_A2.cdt[]\OT1/cmr/m/n/10 , [][]\OT1/cmtt/m/n/10 cyano_result_K_G2.kgg[]\OT 1/cmr/m/n/10 , and [][]\OT1/cmtt/m/n/10 cyano_result_K_A2.kag[]\OT1/cmr/m/n/10 . [254] (./Tutorial/chapter_learning.tex Chapter 16. [255] [256] [257] [258] [259] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. [260] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. [261] [262]) [263] (./Tutorial/chapter_graphics.tex Chapter 17. [264] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [265] [266 <./images/plasmid_linear.png (PNG copy)> <./images/plasmid_circular.png (P NG copy)>] [267] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [268] [269 <./images/GD_sigil_labels.png (PNG copy)>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [270] [271 <./images/GD_sigils.png>] [272 <./imag es/GD_sigil_arrow_shafts.png>] Excluding 'htmlonly' comment. [273 <./images/GD_ sigil_arrow_heads.png>] [274] Excluding 'htmlonly' comment. [275 <./images/plas mid_linear_nice.png (PNG copy)>] [276 <./images/plasmid_circular_nice.png>] Overfull \hbox (2.74086pt too wide) in paragraph at lines 605--605 []\OT1/cmtt/m/n/10 A_colors = [red]*5 + [grey]*7 + [orange]*2 + [grey]*2 + [ora nge] + [grey]*11 + [green]*4 \[] [277] Excluding 'htmlonly' comment. [278 <./images/three_track_simple.png>] [279] Overfull \hbox (28.99063pt too wide) in paragraph at lines 782--782 [] \OT1/cmtt/m/n/10 color = colors.linearlyInterpolatedColor(colors.whit e, colors.firebrick, 0, 100, score)[] Overfull \hbox (2.65141pt too wide) in paragraph at lines 784--790 []\OT1/cmr/m/n/10 There are sev-eral im-por-tant pieces to this code. First the [][]\OT1/cmtt/m/n/10 GenomeDiagram []\OT1/cmr/m/n/10 ob-ject has a [][]\OT1/cm tt/m/n/10 cross_track_links Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [280] [281 <./image s/three_track_cl.png>] [282 <./images/three_track_cl2a.png>] [283] [284 <./imag es/simple_chrom.pdf> <./images/tRNA_chrom.pdf>] [285] Excluding 'htmlonly' comment. [286] Excluding 'htmlonly' comment.) [287] (./Tutorial/chapter_kegg.tex Chapter 18. [288] [289]) [290] (./Tutorial/chapter_phenotype.tex Chapter 19. [291] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['A12']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['B01'], WellReco rd['C01'], ..., WellRecord['H01']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['C03']')[] [292] [293] [294]) [295] (./Tutorial/chapter_cookbook.tex Chapter 20. [296] [297] [298] [299] [300] [301] Overfull \hbox (5.83499pt too wide) in paragraph at lines 426--430 \OT1/cmr/m/n/10 mat (e.g. FASTA files). How-ever, for large FASTQ files it woul d be faster the low-level [][]\OT1/cmtt/m/n/10 FastqGeneralIterator Overfull \hbox (4.57849pt too wide) in paragraph at lines 444--446 \OT1/cmr/m/n/10 That should find $13819$ reads from \OT1/cmtt/m/n/10 SRR014849. fastq \OT1/cmr/m/n/10 and save them to a new FASTQ file, \OT1/cmtt/m/n/10 with[ ]primer.fastq\OT1/cmr/m/n/10 . [302] [303] [304] [305] Overfull \hbox (7.99081pt too wide) in paragraph at lines 765--765 []\OT1/cmtt/m/n/10 Seq('GTCCCAGTATTCGGATTTGTCTGCCAAAACAATGAAATTGACACAGTTTACAAC. ..CCG', SingleLetterAlphabet())[] [306] [307] [308] [309] Excluding 'htmlonly' comment. Overfull \hbox (4.00363pt too wide) in paragraph at lines 1057--1060 []\OT1/cmr/m/it/10 Tip: \OT1/cmr/m/n/10 Rather than us-ing [][]\OT1/cmtt/m/n/10 pylab.show() []\OT1/cmr/m/n/10 to show the plot in a win-dow, you can also use [][]\OT1/cmtt/m/n/10 pylab.savefig(...) [310] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [311 <./image s/hist_plot.png>] [312 <./images/gc_plot.png>] Excluding 'htmlonly' comment. [313 <./images/dot_plot.png>] Excluding 'htmlonly' comment. [314] Excluding 'htmlonly' comment. [315 <./images/dot_plot_scatter.png>] [316 <./ima ges/SRR001666.png>] [317] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [318] [319] [320] [321]) [322] (./Tutorial/chapter_testing.tex Chapter 21. [323] [324] [325] [326] [327] [328] [329] (/usr/share/texlive/texmf-dist/tex/latex/base/omlcmr.fd)) [330] (./Tutorial/chapter_advanced.tex Chapter 22. [331] [332] Overfull \hbox (30.74179pt too wide) in paragraph at lines 198--199 [][][]\OT1/cmtt/m/n/10 factor[]\OT1/cmr/m/n/10 : fac-tor used to mul-ti-ply the log-odds val-ues. Each en-try is gen-er-ated by log(LOM[key])*factor [333] [334]) [335] (./Tutorial/chapter_contributing.tex Chapter 23. [336] [337]) [338] (./Tutorial/chapter_appendix.tex Chapter 24. [339]) [340] [341] [342] [343] (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (344 pages, 2486417 bytes). Transcript written on Tutorial.log. pdflatex biopdb_faq.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./biopdb_faq.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/bookman.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/latin1.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 56. 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[9] LaTeX Warning: Reference `sub:Analysis' on page 10 undefined on input line 805. [10] Overfull \hbox (45.08351pt too wide) in paragraph at lines 960--964 \T1/pbk/l/n/10 Note that in the above case only model 0 of the struc-ture is co n-sid-ered by \T1/pcr/m/n/10 PolypeptideBuilder\T1/pbk/l/n/10 . Overfull \hbox (10.80998pt too wide) in paragraph at lines 968--973 \T1/pbk/l/n/10 try). The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide LaTeX Warning: Reference `cap:DSSP-codes' on page 11 undefined on input line 99 0. [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) Package rerunfilecheck Warning: File `biopdb_faq.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. 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The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on biopdb_faq.pdf (15 pages, 163990 bytes). Transcript written on biopdb_faq.log. pdflatex biopdb_faq.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./biopdb_faq.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/bookman.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/latin1.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 56. (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty (/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def) (/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def (/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def)))) (./biopdb_faq.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pbk.fd) *geometry* driver: auto-detecting *geometry* detected driver: pdftex *geometry* verbose mode - [ preamble ] result: * driver: pdftex * paper: a4paper * layout: * layoutoffset:(h,v)=(0.0pt,0.0pt) * modes: * h-part:(L,W,R)=(89.62709pt, 418.25368pt, 89.6271pt) * v-part:(T,H,B)=(56.9055pt, 731.23584pt, 56.9055pt) * \paperwidth=597.50787pt * \paperheight=845.04684pt * \textwidth=418.25368pt * \textheight=731.23584pt * \oddsidemargin=17.3571pt * \evensidemargin=17.3571pt * \topmargin=-52.36449pt * \headheight=12.0pt * \headsep=25.0pt * \topskip=10.0pt * \footskip=30.0pt * \marginparwidth=65.0pt * \marginparsep=11.0pt * \columnsep=10.0pt * \skip\footins=9.0pt plus 4.0pt minus 2.0pt * \hoffset=0.0pt * \voffset=0.0pt * \mag=1000 * \@twocolumnfalse * \@twosidefalse * \@mparswitchfalse * \@reversemarginfalse * (1in=72.27pt=25.4mm, 1cm=28.453pt) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./biopdb_faq.out) (./biopdb_faq.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) Overfull \hbox (40.90678pt too wide) in paragraph at lines 112--119 []\T1/pbk/l/n/10 However, the [][]\T1/pcr/m/n/10 Bio.PDB.mmCIF.MMCIFlex []\T1/p bk/l/n/10 mod-ule (used in-ter-nally by [][]\T1/pcr/m/n/10 Bio.PDB.MMCIFParser [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspbk.fd) [2] Overfull \hbox (21.75009pt too wide) in paragraph at lines 257--262 \T1/pbk/l/n/10 file to their val-ues. 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The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on biopdb_faq.pdf (15 pages, 163990 bytes). Transcript written on biopdb_faq.log. make -C install make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. 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Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . LaTeX Warning: Reference `sec:is_working' on page 8 undefined on input line 558 . Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' [8] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) Package rerunfilecheck Warning: File `Installation.out' has changed. 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Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149747 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149889 bytes). Transcript written on Installation.log. hevea -fix Installation.tex Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:108: Warning: Undefined label: 'sec:windows_install' ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:460: Warning: Undefined label: 'sec:is_working' ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:537: Warning: Undefined label: 'sec:unix_install' ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:558: Warning: Undefined label: 'sec:is_working' ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element Fixpoint reached in 2 step(s) hevea -fix -text Installation.tex Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode Fixpoint reached in 2 step(s) make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' make[2]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc' make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' rm -f debian/python-biopython.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' mkdir -p Tests_avoid for avoid in PAML_tools EmbossPhylipNew MSAProbs_tool NACCESS_tool PopGen_DFDist PopGen_FDist PopGen_GenePop PopGen_GenePop_EasyController PopGen_SimCoal XXmotif_tool BWA_tool raxml_tool BioSQL_MySQLdb BioSQL_psycopg2 phyml_tool \ ; do \ mv Tests/test_${avoid}.py Tests_avoid ; \ done mv: cannot stat 'Tests/test_PopGen_DFDist.py': No such file or directory mv: cannot stat 'Tests/test_PopGen_FDist.py': No such file or directory mv: cannot stat 'Tests/test_PopGen_SimCoal.py': No such file or directory # For the doc package we need a clean testsuite without all the remaining files. So keep a clean copy here mkdir -p debian/tmp_tests cp -a Tests debian/tmp_tests # remove duplicated file rm -f debian/tmp_tests/Tests/Quality/example.fastq.gz # We also keep the tests we need to avoid for later inspection cp -a Tests_avoid debian/tmp_tests # in the Debian package dialign it is not needed to set DIALIGN2_DIR but the test is verifying this dir # to run the EMBOSS test test_Emboss also requires to have the environment variable EMBOSS_ROOT set LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom \ --test-args='set -e; \ mkdir -p {build_dir}/home; \ mkdir -p {build_dir}/Doc/examples; \ cp -a Doc/Tutorial.tex {build_dir}/Doc; \ cp -a Doc/Tutorial {build_dir}/Doc; \ cp -a Doc/examples {build_dir}/Doc; \ cp -a Tests {build_dir}; \ cd {build_dir}/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline' pybuild --test -i python{version} -p 2.7 --test --system=custom "--test-args=set -e; \\\ mkdir -p {build_dir}/home; \\\ mkdir -p {build_dir}/Doc/examples; \\\ cp -a Doc/Tutorial.tex {build_dir}/Doc; \\\ cp -a Doc/Tutorial {build_dir}/Doc; \\\ cp -a Doc/examples {build_dir}/Doc; \\\ cp -a Tests {build_dir}; \\\ cd {build_dir}/Tests; \\\ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline" I: pybuild base:217: set -e; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples; \ cp -a Doc/Tutorial.tex /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Doc/Tutorial /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Doc/examples /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Tests /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build; \ cd /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home python2.7 run_tests.py --offline test_Ace ... ok test_Affy ... ok test_AlignIO ... ok test_AlignIO_ClustalIO ... ok test_AlignIO_EmbossIO ... ok test_AlignIO_FastaIO ... ok test_AlignIO_MauveIO ... ok test_AlignIO_PhylipIO ... ok test_AlignIO_convert ... ok test_AlignInfo ... ok test_Application ... ok test_BioSQL_MySQLdb_online ... skipping. internet not available test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) test_BioSQL_mysql_connector_online ... skipping. internet not available test_BioSQL_psycopg2_online ... skipping. internet not available test_BioSQL_sqlite3 ... ok test_BioSQL_sqlite3_online ... skipping. internet not available test_CAPS ... ok test_CelFile ... ok test_Chi2 ... ok test_ClustalOmega_tool ... ok test_Clustalw_tool ... ok test_Cluster ... ok test_CodonTable ... ok test_CodonUsage ... ok test_ColorSpiral ... ok test_Compass ... ok test_Consensus ... ok test_Crystal ... ok test_DSSP_tool ... ok test_Dialign_tool ... ok test_EMBL_unittest ... ok test_Emboss ... ok test_EmbossPrimer ... ok test_Entrez ... ok test_Entrez_online ... skipping. internet not available test_Entrez_parser ... ok test_Enzyme ... ok test_ExPASy ... skipping. internet not available test_FSSP ... ok test_Fasttree_tool ... ok test_File ... ok test_GenBank ... ok test_GenBank_unittest ... ok test_GenomeDiagram ... x_order_2: colinear! x_order_2: colinear! ok test_GraphicsBitmaps ... ok test_GraphicsChromosome ... ok test_GraphicsDistribution ... ok test_GraphicsGeneral ... ok test_HMMCasino ... ok test_HMMGeneral ... ok test_KDTree ... ok test_KEGG ... ok test_KEGG_online ... skipping. internet not available test_KGML_graphics ... ok test_KGML_graphics_online ... skipping. internet not available test_KGML_nographics ... ok test_KeyWList ... ok test_Location ... ok test_LogisticRegression ... ok test_MafIO_index ... ok test_Mafft_tool ... ok test_MarkovModel ... ok test_Medline ... ok test_Muscle_tool ... ok test_NCBITextParser ... ok test_NCBIXML ... ok test_NCBI_BLAST_tools ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastp and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ deltablast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ makeblastdb and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -blastdb_version) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ psiblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ rpsblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -subject_besthit) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) ok test_NCBI_qblast ... skipping. internet not available test_NaiveBayes ... ok test_Nexus ... ok test_PAML_baseml ... ok test_PAML_codeml ... ok test_PAML_yn00 ... ok test_PDB ... ok test_PDBList ... skipping. internet not available test_PDB_FragmentMapper ... ok test_PDB_KDTree ... ok test_PDB_MMCIF2Dict ... ok test_PDB_MMCIFParser ... ok test_PDB_Polypetide ... ok test_PDB_ResidueDepth ... skipping. Install MSMS if you want to use it in Biopython. test_PDB_StructureAlignment ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain A is discontinuous at line 13298. PDBConstructionWarning) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain B is discontinuous at line 13344. PDBConstructionWarning) ok test_PDB_Superimposer ... ok test_PDB_vectors ... ok test_Pathway ... ok test_Phd ... ok test_Phylo ... ok test_PhyloXML ... ok test_Phylo_CDAO ... ok test_Phylo_NeXML ... ok test_Phylo_matplotlib ... ok test_Phylo_networkx ... skipping. Install networkx if you wish to use it with Bio.Phylo test_PopGen_GenePop_nodepend ... ok test_Prank_tool ... ok test_Probcons_tool ... ok test_ProtParam ... ok test_QCPSuperimposer ... ok test_RCSBFormats ... ok test_Restriction ... skipping. Under Python 2 this test needs the unittest2 library test_SCOP_Astral ... ok test_SCOP_Cla ... ok test_SCOP_Des ... ok test_SCOP_Dom ... ok test_SCOP_Hie ... ok test_SCOP_Raf ... ok test_SCOP_Residues ... ok test_SCOP_Scop ... ok test_SCOP_online ... skipping. internet not available test_SVDSuperimposer ... ok test_SearchIO_blast_tab ... ok test_SearchIO_blast_tab_index ... ok test_SearchIO_blast_text ... ok test_SearchIO_blast_xml ... ok test_SearchIO_blast_xml_index ... ok test_SearchIO_blat_psl ... ok test_SearchIO_blat_psl_index ... ok test_SearchIO_exonerate ... ok test_SearchIO_exonerate_text_index ... ok test_SearchIO_exonerate_vulgar_index ... ok test_SearchIO_fasta_m10 ... ok test_SearchIO_fasta_m10_index ... ok test_SearchIO_hmmer2_text ... ok test_SearchIO_hmmer2_text_index ... ok test_SearchIO_hmmer3_domtab ... ok test_SearchIO_hmmer3_domtab_index ... ok test_SearchIO_hmmer3_tab ... ok test_SearchIO_hmmer3_tab_index ... ok test_SearchIO_hmmer3_text ... ok test_SearchIO_hmmer3_text_index ... ok test_SearchIO_interproscan_xml ... ok test_SearchIO_legacy ... ok test_SearchIO_model ... ok test_SearchIO_write ... ok test_SeqFeature ... ok test_SeqIO ... ok test_SeqIO_AbiIO ... ok test_SeqIO_FastaIO ... ok test_SeqIO_Insdc ... ok test_SeqIO_PdbIO ... ok test_SeqIO_QualityIO ... ok test_SeqIO_SeqXML ... ok test_SeqIO_convert ... ok test_SeqIO_features ... ok test_SeqIO_index ... ok test_SeqIO_online ... skipping. internet not available test_SeqIO_write ... ok test_SeqRecord ... ok test_SeqUtils ... ok test_Seq_objs ... ok test_SffIO ... ok test_SubsMat ... ok test_SwissProt ... ok test_TCoffee_tool ... ok test_TogoWS ... skipping. internet not available test_TreeConstruction ... ok test_Tutorial ... ok test_UniGene ... ok test_Uniprot ... ok test_Wise ... ok test_align ... ok test_bgzf ... ok test_cellosaurus ... ok test_codonalign ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok test_geo ... ok test_kNN ... ok test_lowess ... ok test_mmtf ... skipping. Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_mmtf_online ... skipping. Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_motifs ... ok test_motifs_online ... skipping. internet not available test_pairwise2 ... ok test_pairwise_aligner ... ok test_phenotype ... ok test_phenotype_fit ... ok test_prodoc ... ok test_prosite1 ... ok test_prosite2 ... ok test_psw ... ok test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython test_seq ... skipping. Under Python 2 this test needs the unittest2 library test_translate ... ok test_trie ... ok Bio.Align docstring test ... ok Bio.Align.Applications._Clustalw docstring test ... ok Bio.Align.Applications._ClustalOmega docstring test ... ok Bio.Align.Applications._Dialign docstring test ... ok Bio.Align.Applications._MSAProbs docstring test ... ok Bio.Align.Applications._Mafft docstring test ... ok Bio.Align.Applications._Muscle docstring test ... ok Bio.Align.Applications._Probcons docstring test ... ok Bio.Align.Applications._Prank docstring test ... ok Bio.Align.Applications._TCoffee docstring test ... ok Bio.AlignIO docstring test ... ok Bio.AlignIO.StockholmIO docstring test ... ok Bio.Alphabet docstring test ... ok Bio.Alphabet.Reduced docstring test ... ok Bio.Application docstring test ... ok Bio.bgzf docstring test ... ok Bio.codonalign docstring test ... ok Bio.codonalign.codonalignment docstring test ... ok Bio.codonalign.codonalphabet docstring test ... ok Bio.codonalign.codonseq docstring test ... ok Bio.Blast.Applications docstring test ... ok Bio.Emboss.Applications docstring test ... ok Bio.GenBank docstring test ... ok Bio.Graphics.GenomeDiagram._Colors docstring test ... ok Bio.KEGG.Compound docstring test ... ok Bio.KEGG.Enzyme docstring test ... ok Bio.KEGG.Gene docstring test ... ok Bio.KEGG.KGML.KGML_parser docstring test ... ok Bio.Nexus.Nexus docstring test ... ok Bio.NMR.xpktools docstring test ... ok Bio.motifs docstring test ... ok Bio.motifs.applications._xxmotif docstring test ... ok Bio.pairwise2 docstring test ... ok Bio.Phylo.Applications._Raxml docstring test ... ok Bio.Phylo.Consensus docstring test ... ok Bio.Phylo.BaseTree docstring test ... ok Bio.SearchIO docstring test ... ok Bio.SearchIO._model docstring test ... ok Bio.SearchIO._model.query docstring test ... ok Bio.SearchIO._model.hit docstring test ... ok Bio.SearchIO._model.hsp docstring test ... ok Bio.SearchIO.BlastIO docstring test ... ok Bio.SearchIO.HmmerIO docstring test ... ok Bio.SearchIO.FastaIO docstring test ... ok Bio.SearchIO.BlatIO docstring test ... ok Bio.SearchIO.ExonerateIO docstring test ... ok Bio.SeqIO docstring test ... ok Bio.SeqIO.AceIO docstring test ... ok Bio.SeqIO.FastaIO docstring test ... ok Bio.SeqIO.IgIO docstring test ... ok Bio.SeqIO.InsdcIO docstring test ... ok Bio.SeqIO.PhdIO docstring test ... ok Bio.SeqIO.PirIO docstring test ... ok Bio.SeqIO.QualityIO docstring test ... ok Bio.SeqIO.SffIO docstring test ... ok Bio.SeqIO.TabIO docstring test ... ok Bio.SeqFeature docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py:2609: BiopythonWarning: Partial codon, len(sequence) not a multiple of three. Explicitly trim the sequence or add trailing N before translation. This may become an error in future. BiopythonWarning) ok Bio.SeqRecord docstring test ... ok Bio.SeqUtils docstring test ... ok Bio.SeqUtils.CheckSum docstring test ... ok Bio.SeqUtils.MeltingTemp docstring test ... ok Bio.SeqUtils.ProtParam docstring test ... ok Bio.Sequencing.Applications._Novoalign docstring test ... ok Bio.Sequencing.Applications._bwa docstring test ... ok Bio.Sequencing.Applications._samtools docstring test ... ok Bio.SwissProt docstring test ... ok Bio.UniProt.GOA docstring test ... ok Bio.Wise docstring test ... ok Bio.Wise.psw docstring test ... ok Bio.Affy.CelFile docstring test ... ok Bio.MaxEntropy docstring test ... ok Bio.PDB.Polypeptide docstring test ... ok Bio.PDB.Selection docstring test ... ok Bio.SeqIO.PdbIO docstring test ... ok Bio.Statistics.lowess docstring test ... ok Bio.SVDSuperimposer docstring test ... ok ---------------------------------------------------------------------- Ran 259 tests in 360.248 seconds Skipping any tests requiring internet access Python version: 2.7.16rc1 (default, Feb 18 2019, 11:05:09) [GCC 8.2.0] Operating system: posix linux2 pybuild --test -i python{version} -p 3.7 --test --system=custom "--test-args=set -e; \\\ mkdir -p {build_dir}/home; \\\ mkdir -p {build_dir}/Doc/examples; \\\ cp -a Doc/Tutorial.tex {build_dir}/Doc; \\\ cp -a Doc/Tutorial {build_dir}/Doc; \\\ cp -a Doc/examples {build_dir}/Doc; \\\ cp -a Tests {build_dir}; \\\ cd {build_dir}/Tests; \\\ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline" I: pybuild base:217: set -e; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples; \ cp -a Doc/Tutorial.tex /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Doc/Tutorial /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Doc/examples /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Tests /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build; \ cd /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home python3.7 run_tests.py --offline x_order_2: colinear! x_order_2: colinear! x_order_2: colinear! test_Ace ... ok test_Affy ... ok test_AlignIO ... ok test_AlignIO_ClustalIO ... ok test_AlignIO_EmbossIO ... ok test_AlignIO_FastaIO ... ok test_AlignIO_MauveIO ... ok test_AlignIO_PhylipIO ... ok test_AlignIO_convert ... ok test_AlignInfo ... ok test_Application ... ok test_BioSQL_MySQLdb_online ... skipping. internet not available test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) test_BioSQL_mysql_connector_online ... skipping. internet not available test_BioSQL_psycopg2_online ... skipping. internet not available test_BioSQL_sqlite3 ... ok test_BioSQL_sqlite3_online ... skipping. internet not available test_CAPS ... ok test_CelFile ... ok test_Chi2 ... ok test_ClustalOmega_tool ... ok test_Clustalw_tool ... ok test_Cluster ... ok test_CodonTable ... ok test_CodonUsage ... ok test_ColorSpiral ... ok test_Compass ... ok test_Consensus ... ok test_Crystal ... ok test_DSSP_tool ... ok test_Dialign_tool ... ok test_EMBL_unittest ... ok test_Emboss ... ok test_EmbossPrimer ... ok test_Entrez ... ok test_Entrez_online ... skipping. internet not available test_Entrez_parser ... ok test_Enzyme ... ok test_ExPASy ... skipping. internet not available test_FSSP ... ok test_Fasttree_tool ... ok test_File ... ok test_GenBank ... ok test_GenBank_unittest ... ok test_GenomeDiagram ... ok test_GraphicsBitmaps ... ok test_GraphicsChromosome ... ok test_GraphicsDistribution ... ok test_GraphicsGeneral ... ok test_HMMCasino ... ok test_HMMGeneral ... ok test_KDTree ... ok test_KEGG ... ok test_KEGG_online ... skipping. internet not available test_KGML_graphics ... ok test_KGML_graphics_online ... skipping. internet not available test_KGML_nographics ... ok test_KeyWList ... ok test_Location ... ok test_LogisticRegression ... ok test_MafIO_index ... ok test_Mafft_tool ... ok test_MarkovModel ... ok test_Medline ... ok test_Muscle_tool ... ok test_NCBITextParser ... ok test_NCBIXML ... ok test_NCBI_BLAST_tools ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastp and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ deltablast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ makeblastdb and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -blastdb_version) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ psiblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ rpsblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -subject_besthit) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) ok test_NCBI_qblast ... skipping. internet not available test_NaiveBayes ... ok test_Nexus ... ok test_PAML_baseml ... ok test_PAML_codeml ... ok test_PAML_yn00 ... ok test_PDB ... ok test_PDBList ... skipping. internet not available test_PDB_FragmentMapper ... ok test_PDB_KDTree ... ok test_PDB_MMCIF2Dict ... ok test_PDB_MMCIFParser ... ok test_PDB_Polypetide ... ok test_PDB_ResidueDepth ... skipping. Install MSMS if you want to use it in Biopython. test_PDB_StructureAlignment ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain A is discontinuous at line 13298. PDBConstructionWarning) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain B is discontinuous at line 13344. PDBConstructionWarning) ok test_PDB_Superimposer ... ok test_PDB_vectors ... ok test_Pathway ... ok test_Phd ... ok test_Phylo ... ok test_PhyloXML ... ok test_Phylo_CDAO ... ok test_Phylo_NeXML ... ok test_Phylo_matplotlib ... ok test_Phylo_networkx ... skipping. Install networkx if you wish to use it with Bio.Phylo test_PopGen_GenePop_nodepend ... ok test_Prank_tool ... ok test_Probcons_tool ... ok test_ProtParam ... ok test_QCPSuperimposer ... ok test_RCSBFormats ... ok test_Restriction ... ok test_SCOP_Astral ... ok test_SCOP_Cla ... ok test_SCOP_Des ... ok test_SCOP_Dom ... ok test_SCOP_Hie ... ok test_SCOP_Raf ... ok test_SCOP_Residues ... ok test_SCOP_Scop ... ok test_SCOP_online ... skipping. internet not available test_SVDSuperimposer ... ok test_SearchIO_blast_tab ... ok test_SearchIO_blast_tab_index ... ok test_SearchIO_blast_text ... ok test_SearchIO_blast_xml ... ok test_SearchIO_blast_xml_index ... ok test_SearchIO_blat_psl ... ok test_SearchIO_blat_psl_index ... ok test_SearchIO_exonerate ... ok test_SearchIO_exonerate_text_index ... ok test_SearchIO_exonerate_vulgar_index ... ok test_SearchIO_fasta_m10 ... ok test_SearchIO_fasta_m10_index ... ok test_SearchIO_hmmer2_text ... ok test_SearchIO_hmmer2_text_index ... ok test_SearchIO_hmmer3_domtab ... ok test_SearchIO_hmmer3_domtab_index ... ok test_SearchIO_hmmer3_tab ... ok test_SearchIO_hmmer3_tab_index ... ok test_SearchIO_hmmer3_text ... ok test_SearchIO_hmmer3_text_index ... ok test_SearchIO_interproscan_xml ... ok test_SearchIO_legacy ... ok test_SearchIO_model ... ok test_SearchIO_write ... ok test_SeqFeature ... ok test_SeqIO ... ok test_SeqIO_AbiIO ... ok test_SeqIO_FastaIO ... ok test_SeqIO_Insdc ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Scanner.py:287: BiopythonParserWarning: Non-standard feature line wrapping (didn't break on comma)? BiopythonParserWarning) ok test_SeqIO_PdbIO ... ok test_SeqIO_QualityIO ... ok test_SeqIO_SeqXML ... ok test_SeqIO_convert ... ok test_SeqIO_features ... ok test_SeqIO_index ... ok test_SeqIO_online ... skipping. internet not available test_SeqIO_write ... ok test_SeqRecord ... ok test_SeqUtils ... ok test_Seq_objs ... ok test_SffIO ... ok test_SubsMat ... ok test_SwissProt ... ok test_TCoffee_tool ... ok test_TogoWS ... skipping. internet not available test_TreeConstruction ... ok test_Tutorial ... ok test_UniGene ... ok test_Uniprot ... ok test_Wise ... ok test_align ... ok test_bgzf ... ok test_cellosaurus ... ok test_codonalign ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok test_geo ... ok test_kNN ... ok test_lowess ... ok test_mmtf ... skipping. Error: Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_mmtf_online ... skipping. Error: Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_motifs ... ok test_motifs_online ... skipping. internet not available test_pairwise2 ... ok test_pairwise_aligner ... ok test_phenotype ... ok test_phenotype_fit ... ok test_prodoc ... ok test_prosite1 ... ok test_prosite2 ... ok test_psw ... ok test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython test_seq ... ok test_translate ... ok test_trie ... ok Bio.Align docstring test ... ok Bio.Align.Applications._Clustalw docstring test ... ok Bio.Align.Applications._ClustalOmega docstring test ... ok Bio.Align.Applications._Dialign docstring test ... ok Bio.Align.Applications._MSAProbs docstring test ... ok Bio.Align.Applications._Mafft docstring test ... ok Bio.Align.Applications._Muscle docstring test ... ok Bio.Align.Applications._Probcons docstring test ... ok Bio.Align.Applications._Prank docstring test ... ok Bio.Align.Applications._TCoffee docstring test ... ok Bio.AlignIO docstring test ... ok Bio.AlignIO.StockholmIO docstring test ... ok Bio.Alphabet docstring test ... ok Bio.Alphabet.Reduced docstring test ... ok Bio.Application docstring test ... ok Bio.bgzf docstring test ... ok Bio.codonalign docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok Bio.codonalign.codonalignment docstring test ... ok Bio.codonalign.codonalphabet docstring test ... ok Bio.codonalign.codonseq docstring test ... ok Bio.Blast.Applications docstring test ... ok Bio.Emboss.Applications docstring test ... ok Bio.GenBank docstring test ... ok Bio.Graphics.GenomeDiagram._Colors docstring test ... ok Bio.KEGG.Compound docstring test ... ok Bio.KEGG.Enzyme docstring test ... ok Bio.KEGG.Gene docstring test ... ok Bio.KEGG.KGML.KGML_parser docstring test ... ok Bio.Nexus.Nexus docstring test ... ok Bio.NMR.xpktools docstring test ... ok Bio.motifs docstring test ... ok Bio.motifs.applications._xxmotif docstring test ... ok Bio.pairwise2 docstring test ... ok Bio.Phylo.Applications._Raxml docstring test ... ok Bio.Phylo.Consensus docstring test ... ok Bio.Phylo.BaseTree docstring test ... ok Bio.SearchIO docstring test ... ok Bio.SearchIO._model docstring test ... ok Bio.SearchIO._model.query docstring test ... ok Bio.SearchIO._model.hit docstring test ... ok Bio.SearchIO._model.hsp docstring test ... ok Bio.SearchIO.BlastIO docstring test ... ok Bio.SearchIO.HmmerIO docstring test ... ok Bio.SearchIO.FastaIO docstring test ... ok Bio.SearchIO.BlatIO docstring test ... ok Bio.SearchIO.ExonerateIO docstring test ... ok Bio.Seq docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 2 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TGA' -> 'W' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok Bio.SeqIO docstring test ... ok Bio.SeqIO.AceIO docstring test ... ok Bio.SeqIO.FastaIO docstring test ... ok Bio.SeqIO.IgIO docstring test ... ok Bio.SeqIO.InsdcIO docstring test ... ok Bio.SeqIO.PhdIO docstring test ... ok Bio.SeqIO.PirIO docstring test ... ok Bio.SeqIO.QualityIO docstring test ... ok Bio.SeqIO.SffIO docstring test ... ok Bio.SeqIO.TabIO docstring test ... ok Bio.SeqFeature docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2609: BiopythonWarning: Partial codon, len(sequence) not a multiple of three. Explicitly trim the sequence or add trailing N before translation. This may become an error in future. BiopythonWarning) ok Bio.SeqRecord docstring test ... ok Bio.SeqUtils docstring test ... ok Bio.SeqUtils.CheckSum docstring test ... ok Bio.SeqUtils.MeltingTemp docstring test ... ok Bio.SeqUtils.ProtParam docstring test ... ok Bio.Sequencing.Applications._Novoalign docstring test ... ok Bio.Sequencing.Applications._bwa docstring test ... ok Bio.Sequencing.Applications._samtools docstring test ... ok Bio.SwissProt docstring test ... ok Bio.UniProt.GOA docstring test ... ok Bio.Wise docstring test ... ok Bio.Wise.psw docstring test ... ok Bio.Affy.CelFile docstring test ... ok Bio.MaxEntropy docstring test ... ok Bio.PDB.Polypeptide docstring test ... ok Bio.PDB.Selection docstring test ... ok Bio.SeqIO.PdbIO docstring test ... ok Bio.Statistics.lowess docstring test ... ok Bio.SVDSuperimposer docstring test ... ok ---------------------------------------------------------------------- Ran 260 tests in 273.539 seconds Skipping any tests requiring internet access Python version: 3.7.2+ (default, Feb 27 2019, 15:41:59) [GCC 8.3.0] Operating system: posix linux mv Tests_avoid/* Tests rmdir Tests_avoid make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python2,python3 --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/python-biopython.substvars debian/python3-biopython.substvars rm -fr -- debian/.debhelper/generated/python-biopython/ debian/python-biopython/ debian/tmp/ debian/.debhelper/generated/python3-biopython/ debian/python3-biopython/ rm -f debian/python-biopython.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_install install -d /<>/python-biopython-1.73\+dfsg/debian/tmp pybuild --install -i python{version} -p 2.7 --dest-dir /<>/python-biopython-1.73\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python setup.py install --root /<>/python-biopython-1.73+dfsg/debian/tmp running install running build running build_py running egg_info writing requirements to biopython.egg-info/requires.txt writing biopython.egg-info/PKG-INFO writing top-level names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/Loader.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/DBUtils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeqDatabase.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_35_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_005.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/mirna.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_003.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_001.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_003.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_004.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_004.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_35_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_005.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_35_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise_aligner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Muscle_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_AbiIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_SeqXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_seq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/compound.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map03070.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.4letter -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/compound.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map00950.rea -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map01100.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko00010.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko01100.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko03070.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/gene.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko00253.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDBList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_SeqXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Consensus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Pathway.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/valine.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/lipoprotein.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/proline.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/lactate.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_internet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Chi2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TogoWS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_align.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Muscle_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_translate.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_geo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_wise.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_PhylipIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PopGen_GenePop_nodepend.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsBitmaps.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/test.fsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/no_smpl1.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/3100.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/fake.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/A6_1-DB3.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/3730.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/empty.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/310.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/test_data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Polypetide.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_FSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Mafft_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CelFile.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_interproscan_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Mafft_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_networkx.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Compass/comtest1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Compass/comtest2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_EmbossIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite1.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/search_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_features.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output.best.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_internet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ClustalOmega_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp004 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp014 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp016 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/P84001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/keywlist2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/F2CXE6.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/R5HY77.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp012 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/H2CNN8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp009 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp005 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp010 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.gff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp007 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp006 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/Q13639.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp011 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp008 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp015 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.list -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/P97881.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.rdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp013 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/keywlist.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/Q13639.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/F2CXE6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/H2CNN8.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Application.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/run_tests.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMCasino.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_write.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Probcons_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_qblast.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Emboss.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_platform.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM645.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM804.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_dual.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM700.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_family.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_series.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSE16.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_affy_chp.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_affy.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM691.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/gen_results.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/baseml_SE.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/bad_results.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/aa_alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/longnames.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/lysin.trees -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/lysin.trees.4.6 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/bad.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model8.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model5.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model6.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model7.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Medline.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_ClustalIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBIXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_samtools_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Fasttree_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SwissProt.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TogoWS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.cla.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/testDom.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/raftest.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.des.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.hie.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_codonalign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_MauveIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_nographics.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_File.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Prank_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenomeDiagram.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_QCPSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Cluster.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SubsMat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Location.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/FSSP/1cnv.fssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CAPS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Saf/saf1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Cluster.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/cw02.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/promals3d.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/odd_consensus.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/temp horses.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/hedgehog.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_cellosaurus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phd.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ExPASy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/.coveragerc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_UniGene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/cor6_6.db -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-sqlite.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-mysql.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-pg.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Ace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/CDAO/test.cdao -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqFeature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsGeneral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Dom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00107.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00165.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00159.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00432.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00640.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00100.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00424.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00113.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00933.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00144.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00472.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00340.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00787.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00149.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00546.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00488.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqUtils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Wise.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Tutorial.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_010.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_009.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_008.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_007.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_006.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_samtools_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Nexus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EmbossPrimer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/InterProScan/test_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Scop.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/phyloxml_examples.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/made_up.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/apaf.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/bcl_2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/distribution.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Prank_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Stockholm/simple.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Stockholm/funny.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_matplotlib.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_NCBI_qblast -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_CodonUsage -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Clustalw -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SeqIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GFF -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Fasttree_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_translate -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Location -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_geo -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GenBank -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_KEGG -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SubsMat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SearchIO_legacy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_FSSP -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_HMMCasino -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GFF2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_ClustalOmega_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_property_manager -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_File -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_AlignIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_align -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Clustalw_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_PDB -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_AlignIO_MauveIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2201L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2215L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2222_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2220L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_010.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2216L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_006.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2222_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_009.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2102L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2220L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2228_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2012L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/mirna.tab -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2014L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2208L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/wnts.xml.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2014L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2230_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_012.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2221L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/wnts.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_013.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2228_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2222L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2222_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_011.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_008.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/mirna.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/html_msgid_29_blastx_001.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EmbossPrimer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_write.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PhyloXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_UniGene.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_kNN.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/EDD_RAT.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/seqs.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/bt001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MafIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TCoffee_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_QualityIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_DSSP_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Fasttree_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EMBL_unittest.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_MySQLdb_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_psycopg2_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802lc.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/multi.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001422.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802x.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Clustalw_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MafIO_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/sam2.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_header.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_refresh.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/readme.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_header.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam2.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/sam1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam1_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam2_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Dialign_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_model.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_vectors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_RCSBFormats.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonUsage.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Crystal.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_MySQLdb_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsChromosome.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_codonalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_ResidueDepth.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_Insdc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Medline.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_features.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Cla.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Mdm_partial.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Hs.2.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Eca.1.2425.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SVDSuperimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ProtParam.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Compass.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_align.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_legacy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Crystal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/RepBase23.02.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DD231055_edited2.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/kipo_prt_sample.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/embl_with_0_line.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/TRBG361.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DD231055_edited.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/SC10H5.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/hla_3260_sample.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/AE017046.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/epo_prt_selection.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/AAA03323.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/Human_contigs.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/101ma_no_coords.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/location_wrap.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/U87107.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/A04195.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/patents.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DS830848.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/xx_after_co.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Affy/affy_v4_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Affy/affy_v3_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Polypetide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Residues.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Uniprot.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmpdirprankmsaWzDlJ2 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Tutorial.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/biosql.ini.appveyor -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Dialign_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/wrong_sequence_indent.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/gbvrl1_start.seq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/one_of.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/HM138502_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/pBAD30.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/1MRR_A.gp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_misc_feature.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_version.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/cor6_6.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/negative_location.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/KF527485_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/DS830848.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_loc_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/noref.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/protein_refseq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/blank_seq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/no_end_marker.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/cor6_6.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/qualifier_escaping_write.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NT_019265.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NP_416719.gbwithparts -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/protein_refseq2.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/iro.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/qualifier_escaping_read.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/EU851978.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_product.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_accession.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.ffn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/no_origin_no_end.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/origin_line.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.tsv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/arab1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/pri1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/EU851978_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/dbsource_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/extra_keywords.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_feature_qualifier.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/KF527485.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/HM138502.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_networkx.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/search_tests_common.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_FSSP.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsDistribution.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KeyWList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_trie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype_fit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TreeConstruction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_CDAO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Raf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBITextParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsBitmaps.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_vulgar_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_FragmentMapper.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cluster/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cluster/cyano.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa.bbcols -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa.backbone -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_matplotlib.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_PdbIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/simple_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/random_organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_widths.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_circular.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/tRNA_chrom.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/multi_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test_1.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_linear.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/line_graph_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/spiral_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_meth_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/square_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test_7.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_meth_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_colors.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/line_graph.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.eps -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Affy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_none.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_multiple.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ner.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/tolweb.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/characters.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/meta_taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/edgelabels.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/trees-uris.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/treebase-record.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/trees.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/nexml.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/timetree.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/sets.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/phenoscape.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/meta_types.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_geo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_trie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeuralNetwork/repeat.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeuralNetwork/enolase.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/ExtendedPhylip/primates.phyx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Compass.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_StructureAlignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/protein_count.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/acc_rep_mat.pik -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/redAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/protein_freq.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/aaDistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/redAltAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/seq_tests_common.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme_v_4_11_4.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/minimal_test.meme -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.rna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo2.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c2line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c3line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/big.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c3space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c2space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo3.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_psycopg2_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TCoffee_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_RCSBFormats.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Enzyme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBITextParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/test.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/test_Nexus_input.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/bats.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/codonposset.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/int_node_labels.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/Cw_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/clustalw.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/DMA_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/B_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/DMB_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Probcons_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Application.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Location.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/rna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/global_species_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/protein_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/corrupt_example2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/corrupt_example1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/dna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_qblast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIF2Dict.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIFParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Astral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output.best.fas -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmpdirprankmsaJcmCc3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_NeXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PopGen_GenePop_nodepend.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/consed_sample.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/seq.cap.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/contig1.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Wise/human_114_g01_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Wise/human_114_g02_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsDistribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Clustalw_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_QCPSuperimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SwissProt.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/test.log -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/msa.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/majority_ref.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/upgma.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/strict_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/consensus_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/adam_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/nj.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/neighbor_trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/pars3.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Scop.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_DSSP_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_bgzf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_nographics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqRecord.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/drosophilla.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl2.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro1.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_nucl.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_pro.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro5.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro4.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/adh.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro2.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl5.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro3.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl4.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_legacy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMGeneral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/BadPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Hie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite1.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Emboss.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_Insdc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/dups.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/aster_no_wrap.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output006.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output015.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/loveliesbleeding.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output016.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output010.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/phlox.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output012.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output007.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/lupine.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output009.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output013.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/lavender.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/sweetpea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/fa01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output003.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/rosemary.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output014.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output005.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/rose.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output001.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/centaurea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/aster.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/wisteria.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output008.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output011.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output004.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output002.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/elderberry.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/horses.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/interlaced2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/hennigian.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/horses.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/sequential.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/reference_dna.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/interlaced.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/random.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/sequential2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/reference_dna2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/nucleotide1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/taxonomy.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/egquery2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/nucleotide2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/protein.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed3.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/ncbi_mim.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/egquery1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/journals.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/efetch_schemas.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/espell.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_unit_sep.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_spaces.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/tricky.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example_dos.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_title.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_null.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_short_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_vtab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_double_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_del.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example_dos.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_no_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_93.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_diff_ids.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_tabs.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_double_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_space.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_long_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_escape.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/zero_length.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_tab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Seq_objs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/seq_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniProt/goa_yeast.gaf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Seq_objs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype_fit.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/bac_find.psearch -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/short.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/no_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/needle.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/water2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/alignret.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/cds_reverse.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/matcher_simple.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/bac_find.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/cds_forward.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/NirK.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/needle_asis.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/matcher_pair.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/NirK_full.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/water.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/internal_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Des.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Affy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prodoc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ClustalOmega_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Uniprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1MOM_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/3JQH.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/ions.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.xyzr -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2OFG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/dssp_xtra_Sander.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/occupancy.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.rsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/a_structure.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4Q9R_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/alignment_file.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4ZHL.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1SSU_mod.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Sander_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2XHE.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2XHE.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4CUP.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1SSU_mod.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/a_structure.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG_noheader.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/lib_10_z_5.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4CUP.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1LCD.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1LCD.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Miller_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.asa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4ZHL.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Wilke_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1AS5.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SubsMat.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ExPASy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMCasino.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/foki.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/bamii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/foki.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/bamii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/pvuii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/taqi.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/cac81.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/crei.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/taqi.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/pvuii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/crei.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/cac81.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CAPS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ColorSpiral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise_aligner.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EMBL_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Restriction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SffIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta2.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta9.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/triple_sff_rel_paths.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/triple_sff.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/paired.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/greek.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Astral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Superimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_translate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_lowess.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SVDSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NaiveBayes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/bundle_without_target.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_test.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/unfinished.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/humor.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/cnksr3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/wrong_version.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/invalid.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/length_coords_mismatch.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/corrupt.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/bug2453.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenomeDiagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_LogisticRegression.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_psw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/biosql.ini.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank_unittest.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd_454 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd_solexa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.bz2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/make_subsmat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/swissprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/nmr/noed.xpk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/nmr/simplepredict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/my_blast.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/alpha.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/PF05371_seed.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/my_blat.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/Proux_et_al_2002_Figure_6.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ec_5.4.2.2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/m_cold.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/beta.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/fasta_dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/simple.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/www_blast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ACT_example.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/clustal_run.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/fasta_iterator.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/getgene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_pdb.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_motifs.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_advanced.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_kegg.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_annot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_entrez.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_introduction.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_searchio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_graphics.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_quick_start.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_align.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_appendix.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phenotype.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phylo.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cluster.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_popgen.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phylo.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_uniprot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seqio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_testing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_appendix.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cluster.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_learning.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_introduction.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seqio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_blast.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_motifs.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_kegg.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_objects.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_contributing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_graphics.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_align.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_quick_start.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_objects.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_learning.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_entrez.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_annot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_advanced.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cookbook.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_searchio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cookbook.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_contributing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phenotype.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_blast.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_pdb.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_testing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_popgen.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_uniprot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_pathway.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/REST.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/LogisticRegression.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/AlignInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Dialign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Clustalw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Mafft.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_TCoffee.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Probcons.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Prank.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Muscle.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_ClustalOmega.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_MSAProbs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SwissIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SffIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SeqXmlIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/QualityIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/TabIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PdbIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AbiIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/UniprotIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/Interfaces.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PirIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PhdIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/InsdcIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AceIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/IgIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/kNN.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NewickIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/chi2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_paml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Newick.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/BaseTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXMLIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXMLIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Consensus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/TreeConstruction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NexusIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAOIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_io.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_cdao_owl.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Phyml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Fasttree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Raxml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/KeyWList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/IUPACData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/CodonTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/SCOPData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Utilities.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Trainer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/DynamicProgramming.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/Reduced.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/IUPAC.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Dom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Residues.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Hie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Des.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Cla.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Raf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/FSSPTools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/fssp_rec.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Applications.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIWWW.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CheckSum.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsageIndices.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/MeltingTemp.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsage.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/IsoelectricPoint.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParamData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/lcc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParam.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/xpktools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prosite.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prodoc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/cellosaurus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Enzyme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/Graph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/MultiGraph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/lowess.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NaiveBayes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/CelFile.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Scanner.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triefind.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/_cluster.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Graph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Feature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Track.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Colors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Diagram.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/BasicChromosome.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/KGML_vis.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/ColorSpiral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Distribution.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Comparative.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/DisplayRepresentation.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqFeature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/FreqTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/MatrixInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/pairwise2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/_xxmotif.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/thresholds.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/alignace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/transfac.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/meme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/mast.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/minimal.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/matrix.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/FileParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nexus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Trees.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/StandardData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nodes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/File.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Ace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Phd.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_Novoalign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_bwa.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_samtools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/psw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalphabet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/chisq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonseq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/phen_micro.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/pm_fitting.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/bgzf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/Parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/GOA.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Primer3.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Applications.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/PrimerSearch.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmcifio.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Superimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Residue.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NACCESS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/ResidueDepth.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/FragmentMapper.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Polypeptide.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/HSExposure.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Entity.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Model.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Atom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Dice.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIF2Dict.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Selection.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/DSSP.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/parse_pdb_header.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureAlignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NeighborSearch.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBExceptions.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/vectors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Vector.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Structure.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIFParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Chain.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/AbstractPropertyMap.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MaxEntropy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MauveIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/PhylipIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/NexusIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/Interfaces.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/ClustalIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/EmbossIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MafIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/StockholmIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/_CKDTree.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/PrintFormat.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/RanaConfig.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction_Dictionary.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqRecord.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/NCBIStandalone.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/ParserSupport.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hit.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hsp.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/query.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlatIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/methods creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/mcoffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/plugins creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/plugins/linux creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home/.cache/matplotlib/fontList.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib/tex.cache byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/BioSeq.py to BioSeq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/Loader.py to Loader.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/DBUtils.py to DBUtils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Muscle_tool.py to test_Muscle_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_SeqXML.py to test_SeqIO_SeqXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TogoWS.py to test_TogoWS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_align.py to test_align.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_lowess.py to test_lowess.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_FSSP.py to test_FSSP.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Pathway.py to test_Pathway.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/search_tests_common.py to search_tests_common.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/requires_internet.py to requires_internet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Application.py to test_Application.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Ace.py to test_Ace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/run_tests.py to run_tests.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenBank.py to test_GenBank.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py to test_BioSQL_mysql_connector_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_text.py to test_SearchIO_blast_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo.py to test_Phylo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/gen_results.py to gen_results.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO.py to test_AlignIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Medline.py to test_Medline.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SwissProt.py to test_SwissProt.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_File.py to test_File.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_mmtf.py to test_mmtf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_QCPSuperimposer.py to test_QCPSuperimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SubsMat.py to test_SubsMat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB.py to test_PDB.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Location.py to test_Location.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Enzyme.py to test_Enzyme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CAPS.py to test_CAPS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Cluster.py to test_Cluster.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_UniGene.py to test_UniGene.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez.py to test_Entrez.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Tutorial.py to test_Tutorial.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDBList.py to test_PDBList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_convert.py to test_SeqIO_convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phd.py to test_Phd.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_MafIO_index.py to test_MafIO_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_phenotype.py to test_phenotype.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_codonalign.py to test_codonalign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_mmtf_online.py to test_mmtf_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_online.py to test_SCOP_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prosite2.py to test_prosite2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Nexus.py to test_Nexus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Crystal.py to test_Crystal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_Polypetide.py to test_PDB_Polypetide.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_ResidueDepth.py to test_PDB_ResidueDepth.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CodonUsage.py to test_CodonUsage.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SffIO.py to test_SffIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsBitmaps.py to test_GraphicsBitmaps.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/requires_wise.py to requires_wise.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_geo.py to test_geo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_trie.py to test_trie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Compass.py to test_Compass.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KDTree.py to test_KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Chi2.py to test_Chi2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_RCSBFormats.py to test_RCSBFormats.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBITextParser.py to test_NCBITextParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_psw.py to test_psw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_seq.py to test_seq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/common_BioSQL.py to common_BioSQL.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_pairwise2.py to test_pairwise2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_DSSP_tool.py to test_DSSP_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prosite1.py to test_prosite1.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Emboss.py to test_Emboss.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KEGG.py to test_KEGG.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenBank_unittest.py to test_GenBank_unittest.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_kNN.py to test_kNN.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/seq_tests_common.py to seq_tests_common.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KeyWList.py to test_KeyWList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ProtParam.py to test_ProtParam.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Affy.py to test_Affy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Uniprot.py to test_Uniprot.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Wise.py to test_Wise.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ExPASy.py to test_ExPASy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prodoc.py to test_prodoc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Consensus.py to test_Consensus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_bgzf.py to test_bgzf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_motifs_online.py to test_motifs_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_motifs.py to test_motifs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CelFile.py to test_CelFile.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Restriction.py to test_Restriction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_translate.py to test_translate.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CodonTable.py to test_CodonTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_PdbIO.py to test_SeqIO_PdbIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO.py to test_SeqIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.py to make_subsmat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/swissprot.py to swissprot.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.py to simplepredict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py to Proux_et_al_2002_Figure_6.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.py to fasta_dictionary.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/www_blast.py to www_blast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.py to ACT_example.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.py to clustal_run.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.py to fasta_iterator.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/getgene.py to getgene.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/REST.py to REST.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Mafft.py to _Mafft.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Prank.py to _Prank.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Dialign.py to _Dialign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Muscle.py to _Muscle.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Probcons.py to _Probcons.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/AbiIO.py to AbiIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PdbIO.py to PdbIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/IgIO.py to IgIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SwissIO.py to SwissIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/_index.py to _index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/Interfaces.py to Interfaces.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/QualityIO.py to QualityIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/_convert.py to _convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PirIO.py to PirIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/TabIO.py to TabIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SffIO.py to SffIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/AceIO.py to AceIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_io.py to _io.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXML.py to NeXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAO.py to CDAO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Consensus.py to Consensus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Newick.py to Newick.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/SCOPData.py to SCOPData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/MarkovModel.py to MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/Reduced.py to Reduced.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIXML.py to NCBIXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/Applications.py to Applications.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prosite.py to Prosite.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/KGML_vis.py to KGML_vis.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/alignace.py to alignace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/thresholds.py to thresholds.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/meme.py to meme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/transfac.py to transfac.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/minimal.py to minimal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/mast.py to mast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/matrix.py to matrix.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.py to db.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Controller.py to Controller.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/StandardData.py to StandardData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Index.py to Index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/kNN.py to kNN.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonseq.py to codonseq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalignment.py to codonalignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/chisq.py to chisq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalphabet.py to codonalphabet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/pm_fitting.py to pm_fitting.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/phen_micro.py to phen_micro.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Seq.py to Seq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt/GOA.py to GOA.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/Applications.py to Applications.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/Primer3.py to Primer3.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmcifio.py to mmcifio.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/vectors.py to vectors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/File.py to File.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/MafIO.py to MafIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/MauveIO.py to MauveIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/RanaConfig.py to RanaConfig.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction.py to Restriction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/PrintFormat.py to PrintFormat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/bgzf.py to bgzf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/triefind.py to triefind.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.py to _index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.py to query.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.py to hit.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.pyc running install_egg_info Copying biopython.egg-info to /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info Skipping SOURCES.txt running install_scripts pybuild --install -i python{version} -p 3.7 --dest-dir /<>/python-biopython-1.73\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/python-biopython-1.73+dfsg/debian/tmp running install running build running build_py running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/BioSeqDatabase.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/DBUtils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/Loader.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/BioSeq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_35_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_005.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/mirna.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_003.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_001.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_003.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_004.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_004.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_35_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_005.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_35_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_pairwise_aligner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Muscle_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/common_BioSQL_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/compound.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map03070.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.4letter -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/compound.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map00950.rea -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map01100.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko00010.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko01100.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko03070.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/gene.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko00253.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_SeqXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/valine.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/lipoprotein.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/proline.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/lactate.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TogoWS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_align.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PopGen_GenePop_nodepend.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/test.fsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/no_smpl1.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/3100.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/fake.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/A6_1-DB3.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/3730.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/empty.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/310.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/test_data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_FSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Mafft_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_networkx.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Compass/comtest1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Compass/comtest2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/search_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_features.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output.best.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/requires_internet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ClustalOmega_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp004 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp014 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp016 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/P84001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/keywlist2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/F2CXE6.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/R5HY77.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp012 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/H2CNN8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp009 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp005 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp010 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.gff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp007 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp006 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/Q13639.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp011 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp008 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp015 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.list -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/P97881.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.rdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp013 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/keywlist.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/Q13639.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/F2CXE6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/H2CNN8.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Application.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/run_tests.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenBank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_mysql_connector_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Probcons_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_platform.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM645.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM804.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_dual.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM700.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_family.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_series.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSE16.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_affy_chp.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_affy.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM691.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/gen_results.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/baseml_SE.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/bad_results.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/aa_alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/longnames.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/lysin.trees -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/lysin.trees.4.6 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/bad.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model8.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model5.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model6.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model7.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Medline.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SwissProt.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.cla.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/testDom.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/raftest.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.des.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.hie.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Prank_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_mmtf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_QCPSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SubsMat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Location.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/FSSP/1cnv.fssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CAPS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Saf/saf1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Cluster.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/cw02.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/promals3d.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/odd_consensus.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/temp horses.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/hedgehog.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/.coveragerc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_UniGene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/cor6_6.db -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-sqlite.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-mysql.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-pg.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/CDAO/test.cdao -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00107.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00165.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00159.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00432.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00640.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00100.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00424.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00113.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00933.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00144.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00472.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00340.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00787.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00149.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00546.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00488.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Tutorial.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_010.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_009.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_008.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_007.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_006.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_samtools_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_EmbossPrimer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/InterProScan/test_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Scop.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/phyloxml_examples.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/made_up.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/apaf.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/bcl_2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/distribution.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Stockholm/simple.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Stockholm/funny.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_sqlite3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_NCBI_qblast -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_CodonUsage -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Clustalw -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SeqIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GFF -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Fasttree_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_translate -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Location -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_geo -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GenBank -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_KEGG -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SubsMat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SearchIO_legacy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_FSSP -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_HMMCasino -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GFF2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_ClustalOmega_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_property_manager -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_File -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_AlignIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_align -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Clustalw_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_PDB -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_AlignIO_MauveIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2201L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2215L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2222_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2220L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_010.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2216L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_006.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2222_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_009.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2102L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2220L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2228_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2012L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/mirna.tab -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2014L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2208L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/wnts.xml.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2014L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2230_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_012.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2221L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/wnts.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_013.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2228_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2222L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2222_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_011.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_008.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/mirna.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/html_msgid_29_blastx_001.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmpdirprankmsafes3gI creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/EDD_RAT.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/seqs.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/bt001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_MafIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TCoffee_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Fasttree_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_phenotype.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_MySQLdb_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_psycopg2_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802lc.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/multi.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001422.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802x.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/sam2.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_header.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_refresh.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/readme.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_header.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam2.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/sam1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam1_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam2_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_codonalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_Insdc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_mmtf_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prosite2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Mdm_partial.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Hs.2.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Eca.1.2425.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_legacy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Crystal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/RepBase23.02.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DD231055_edited2.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/kipo_prt_sample.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/embl_with_0_line.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/TRBG361.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DD231055_edited.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/SC10H5.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/hla_3260_sample.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/AE017046.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/epo_prt_selection.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/AAA03323.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/Human_contigs.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/101ma_no_coords.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/location_wrap.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/U87107.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/A04195.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/patents.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DS830848.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/xx_after_co.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Affy/affy_v4_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Affy/affy_v3_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_Polypetide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/biosql.ini.appveyor -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Dialign_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/wrong_sequence_indent.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/gbvrl1_start.seq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/one_of.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/HM138502_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/pBAD30.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/1MRR_A.gp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_misc_feature.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_version.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/cor6_6.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/negative_location.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/KF527485_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/DS830848.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_loc_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/noref.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/protein_refseq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/blank_seq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/no_end_marker.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/cor6_6.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/qualifier_escaping_write.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NT_019265.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NP_416719.gbwithparts -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/protein_refseq2.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/iro.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/qualifier_escaping_read.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/EU851978.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_product.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_accession.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.ffn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/no_origin_no_end.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/origin_line.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.tsv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/arab1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/pri1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/EU851978_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/dbsource_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/extra_keywords.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_feature_qualifier.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/KF527485.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/HM138502.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_phenotype_fit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blat_psl_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsBitmaps.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/requires_wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_graphics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cluster/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cluster/cyano.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_graphics_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa.bbcols -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa.backbone -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_matplotlib.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/simple_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/random_organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_widths.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_circular.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/tRNA_chrom.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/multi_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test_1.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_linear.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/line_graph_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/spiral_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_meth_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/square_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test_7.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_meth_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_colors.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/line_graph.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.eps -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_none.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_multiple.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ner.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/tolweb.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/characters.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/meta_taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/edgelabels.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/trees-uris.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/treebase-record.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/trees.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/nexml.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/timetree.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/sets.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/phenoscape.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/meta_types.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_geo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_trie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_mysql_connector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmpdirprankmsa8XtJiF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeuralNetwork/repeat.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeuralNetwork/enolase.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/ExtendedPhylip/primates.phyx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_sqlite3_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Compass.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/protein_count.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/acc_rep_mat.pik -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/redAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/protein_freq.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/aaDistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/redAltAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme_v_4_11_4.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/minimal_test.meme -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.rna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo2.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c2line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c3line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/big.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c3space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c2space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo3.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer2_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_RCSBFormats.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_fasta_m10_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBITextParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/test.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/test_Nexus_input.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/bats.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/codonposset.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/int_node_labels.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/Cw_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/clustalw.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/DMA_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/B_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/DMB_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/rna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/global_species_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/protein_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/corrupt_example2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/corrupt_example1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/dna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_qblast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_fasta_m10.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Astral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output.best.fas -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/consed_sample.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/seq.cap.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/contig1.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Wise/human_114_g01_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Wise/human_114_g02_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_xml_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsDistribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/common_BioSQL.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Clustalw_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/test.log -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/msa.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/majority_ref.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/upgma.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/strict_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/consensus_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/adam_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/nj.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/neighbor_trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/pars3.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_DSSP_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_nographics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/drosophilla.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl2.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro1.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_nucl.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_pro.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro5.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro4.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/adh.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro2.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl5.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro3.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl4.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/BadPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prosite1.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Emboss.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KEGG.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/dups.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/aster_no_wrap.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output006.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output015.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/loveliesbleeding.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output016.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output010.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/phlox.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output012.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output007.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/lupine.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output009.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output013.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/lavender.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/sweetpea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/fa01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output003.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/rosemary.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output014.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output005.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/rose.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output001.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/centaurea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/aster.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/wisteria.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output008.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output011.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output004.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output002.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/elderberry.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenBank_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/horses.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/interlaced2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/hennigian.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/horses.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/sequential.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/reference_dna.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/interlaced.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/random.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/sequential2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/reference_dna2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/nucleotide1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/taxonomy.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/egquery2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/nucleotide2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/protein.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed3.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/ncbi_mim.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/egquery1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/journals.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/efetch_schemas.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/espell.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_unit_sep.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_spaces.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/tricky.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example_dos.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_title.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_null.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_short_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_vtab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_double_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_del.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example_dos.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_no_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_93.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_diff_ids.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_tabs.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_double_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_space.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_long_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_escape.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/zero_length.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_tab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/seq_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniProt/goa_yeast.gaf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Seq_objs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/bac_find.psearch -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/short.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/no_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/needle.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/water2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/alignret.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/cds_reverse.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/matcher_simple.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/bac_find.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/cds_forward.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/NirK.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/needle_asis.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/matcher_pair.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/NirK_full.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/water.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/internal_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Affy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Uniprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1MOM_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/3JQH.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/ions.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.xyzr -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2OFG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/dssp_xtra_Sander.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/occupancy.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.rsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/a_structure.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4Q9R_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/alignment_file.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4ZHL.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1SSU_mod.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Sander_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2XHE.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2XHE.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4CUP.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1SSU_mod.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/a_structure.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG_noheader.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/lib_10_z_5.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4CUP.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1LCD.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1LCD.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Miller_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.asa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4ZHL.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Wilke_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1AS5.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blat_psl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ExPASy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_HMMCasino.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/foki.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/bamii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/foki.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/bamii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/pvuii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/taqi.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/cac81.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/crei.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/taqi.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/pvuii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/crei.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/cac81.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_EMBL_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_motifs_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_motifs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta2.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta9.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/triple_sff_rel_paths.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/triple_sff.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/paired.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/greek.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_translate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SVDSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/bundle_without_target.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_test.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/unfinished.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/humor.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/cnksr3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/wrong_version.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/invalid.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/length_coords_mismatch.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/corrupt.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/bug2453.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenomeDiagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/biosql.ini.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KEGG_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Cluster.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer2_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_kNN.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_UniGene.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Nexus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenBank.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_QCPSuperimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Residues.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Application.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_interproscan_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_sqlite3.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_fasta_m10.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_mysql_connector.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/common_BioSQL_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Clustalw_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_PdbIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blat_psl_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer2_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_trie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_ClustalIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Cla.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_pairwise_aligner.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqUtils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez_parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_PhylipIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Restriction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CelFile.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBI_BLAST_tools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsChromosome.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Ace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SffIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqRecord.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_HMMGeneral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_DSSP_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/requires_wise.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/common_BioSQL.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prosite1.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_cellosaurus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_phenotype.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_Insdc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Uniprot.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_MafIO_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Emboss.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_fasta_m10_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsBitmaps.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TreeConstruction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_FSSP.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_xml_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Seq_objs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Location.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_vectors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_EmbossPrimer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_MySQLdb_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_LogisticRegression.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_bgzf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBITextParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate_vulgar_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_model.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_psw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_geo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBIXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_graphics.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CodonUsage.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KEGG_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenomeDiagram.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_FragmentMapper.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Medline.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Des.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Fasttree_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prodoc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_RCSBFormats.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ExPASy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqFeature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Compass.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_motifs_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Muscle_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_lowess.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_mmtf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Astral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ProtParam.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_SeqXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_MauveIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_NeXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Tutorial.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_ResidueDepth.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_Polypetide.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ClustalOmega_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phd.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_QualityIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsGeneral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_tab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Scop.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsDistribution.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SVDSuperimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_mysql_connector_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_EmbossIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_samtools_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_codonalign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PhyloXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ColorSpiral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_AbiIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_sqlite3_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_networkx.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Probcons_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_legacy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_EMBL_unittest.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SubsMat.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenBank_unittest.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_MMCIFParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Dialign_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_align.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NaiveBayes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_translate.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_write.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/seq_tests_common.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KEGG.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blat_psl.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TCoffee_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_StructureAlignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_pairwise2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_write.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_Superimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Raf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Dom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_nographics.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_graphics_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_motifs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Pathway.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PopGen_GenePop_nodepend.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/search_tests_common.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KeyWList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Consensus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_CDAO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_MMCIF2Dict.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_phenotype_fit.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Mafft_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_matplotlib.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_features.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Crystal.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prosite2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TogoWS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_tab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Hie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SwissProt.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_psycopg2_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_HMMCasino.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDBList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Wise.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_mmtf_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Chi2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CodonTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_File.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Affy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CAPS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Enzyme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_seq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBI_qblast.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/requires_internet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Prank_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_HMMGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd_454 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd_solexa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.bz2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/make_subsmat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/swissprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/nmr/noed.xpk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/nmr/simplepredict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/my_blast.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/alpha.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/PF05371_seed.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/my_blat.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/Proux_et_al_2002_Figure_6.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ec_5.4.2.2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/m_cold.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/beta.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/fasta_dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/simple.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/www_blast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ACT_example.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/clustal_run.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/fasta_iterator.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/getgene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_pdb.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_motifs.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_advanced.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_kegg.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_annot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_entrez.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_introduction.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_searchio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_graphics.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_quick_start.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_align.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_appendix.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phenotype.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phylo.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cluster.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_popgen.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phylo.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_uniprot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seqio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_testing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_appendix.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cluster.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_learning.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_introduction.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seqio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_blast.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_motifs.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_kegg.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_objects.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_contributing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_graphics.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_align.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_quick_start.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_objects.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_learning.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_entrez.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_annot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_advanced.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cookbook.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_searchio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cookbook.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_contributing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phenotype.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_blast.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_pdb.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_testing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_popgen.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_uniprot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/KGML_pathway.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/KGML_parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__pycache__/REST.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Probcons.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Muscle.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_TCoffee.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Clustalw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_MSAProbs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Dialign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Prank.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_ClustalOmega.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Mafft.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__pycache__/AlignInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/TabIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/UniprotIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/QualityIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/AbiIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/IgIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SeqXmlIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SffIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/InsdcIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PhdIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PdbIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PirIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/AceIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SwissIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/Interfaces.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_paml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/chi2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Phyml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Fasttree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Raxml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_io.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/Newick.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/TreeConstruction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/BaseTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/PhyloXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/Consensus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NeXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NeXMLIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/CDAOIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NewickIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_cdao_owl.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NexusIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/PhyloXMLIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/CDAO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__pycache__/KeyWList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/IUPACData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/SCOPData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/CodonTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/Utilities.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/Trainer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/DynamicProgramming.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/IUPAC.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/Reduced.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Des.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Cla.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Dom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Raf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Residues.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Hie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/FSSPTools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/fssp_rec.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/Applications.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/NCBIXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/NCBIWWW.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/ProtParam.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CodonUsageIndices.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/lcc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CodonUsage.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CheckSum.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/MeltingTemp.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/ProtParamData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/IsoelectricPoint.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__pycache__/xpktools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/cellosaurus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Enzyme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Prodoc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Prosite.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/MultiGraph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/Graph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__pycache__/lowess.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__pycache__/CelFile.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/Scanner.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Feature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_LinearDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Graph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_CrossLink.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Track.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_GraphSet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Colors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Diagram.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_FeatureSet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_AbstractDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_CircularDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/KGML_vis.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/BasicChromosome.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/Distribution.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/Comparative.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/ColorSpiral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/DisplayRepresentation.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/MatrixInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/FreqTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__pycache__/_xxmotif.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/meme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/matrix.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/minimal.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/mast.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/thresholds.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/alignace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/transfac.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__pycache__/FileParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/StandardData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Nexus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Trees.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Nodes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_Novoalign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_bwa.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_samtools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/Phd.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/Ace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__pycache__/psw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/chisq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonseq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonalphabet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonalignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/phen_micro.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/pm_fitting.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__pycache__/Parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__pycache__/GOA.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/Applications.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/Primer3.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/PrimerSearch.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/mmcifio.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/MMCIF2Dict.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/StructureAlignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Residue.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Selection.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Dice.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Vector.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/DSSP.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Model.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/AbstractPropertyMap.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/MMCIFParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/vectors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/ResidueDepth.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Structure.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/HSExposure.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Polypeptide.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/NACCESS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBExceptions.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/FragmentMapper.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/NeighborSearch.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/StructureBuilder.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Chain.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/parse_pdb_header.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Atom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Entity.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Superimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/EmbossIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/PhylipIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/StockholmIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/ClustalIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/MafIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/NexusIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/MauveIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/Interfaces.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__pycache__/KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/Restriction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/RanaConfig.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/PrintFormat.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/Restriction_Dictionary.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/SeqFeature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/pairwise2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/triefind.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/MaxEntropy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/Seq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/LogisticRegression.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/kNN.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/bgzf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/File.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/NaiveBayes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/SeqRecord.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_vulgar.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_cigar.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/ParserSupport.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/NCBIStandalone.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/hit.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/hsp.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/query.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_domtab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer2_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__pycache__/interproscan_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/BlatIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/methods creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/mcoffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/plugins creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/plugins/linux creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib/tex.cache copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home/.cache/matplotlib/fontlist-v300.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/BioSeq.py to BioSeq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/Loader.py to Loader.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/DBUtils.py to DBUtils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Muscle_tool.py to test_Muscle_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_SeqXML.py to test_SeqIO_SeqXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_align.py to test_align.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_lowess.py to test_lowess.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_FSSP.py to test_FSSP.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/requires_internet.py to requires_internet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Application.py to test_Application.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Ace.py to test_Ace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/run_tests.py to run_tests.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py to test_BioSQL_mysql_connector_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_text.py to test_SearchIO_blast_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Medline.py to test_Medline.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_File.py to test_File.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_mmtf.py to test_mmtf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_QCPSuperimposer.py to test_QCPSuperimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SubsMat.py to test_SubsMat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB.py to test_PDB.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Location.py to test_Location.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CAPS.py to test_CAPS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Cluster.py to test_Cluster.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_UniGene.py to test_UniGene.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDBList.py to test_PDBList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_convert.py to test_SeqIO_convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phd.py to test_Phd.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_MafIO_index.py to test_MafIO_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_codonalign.py to test_codonalign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_mmtf_online.py to test_mmtf_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_online.py to test_SCOP_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prosite2.py to test_prosite2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Crystal.py to test_Crystal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_Polypetide.py to test_PDB_Polypetide.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_ResidueDepth.py to test_PDB_ResidueDepth.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CodonUsage.py to test_CodonUsage.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SffIO.py to test_SffIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsBitmaps.py to test_GraphicsBitmaps.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/requires_wise.py to requires_wise.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_geo.py to test_geo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_trie.py to test_trie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Compass.py to test_Compass.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KDTree.py to test_KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_RCSBFormats.py to test_RCSBFormats.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBITextParser.py to test_NCBITextParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_psw.py to test_psw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_seq.py to test_seq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_DSSP_tool.py to test_DSSP_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prosite1.py to test_prosite1.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Emboss.py to test_Emboss.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KEGG.py to test_KEGG.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenBank_unittest.py to test_GenBank_unittest.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_kNN.py to test_kNN.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/seq_tests_common.py to seq_tests_common.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KeyWList.py to test_KeyWList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ProtParam.py to test_ProtParam.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Affy.py to test_Affy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Uniprot.py to test_Uniprot.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Wise.py to test_Wise.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prodoc.py to test_prodoc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Consensus.py to test_Consensus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_bgzf.py to test_bgzf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_motifs.py to test_motifs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CelFile.py to test_CelFile.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Restriction.py to test_Restriction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_translate.py to test_translate.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_PdbIO.py to test_SeqIO_PdbIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/make_subsmat.py to make_subsmat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/swissprot.py to swissprot.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr/simplepredict.py to simplepredict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py to Proux_et_al_2002_Figure_6.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/fasta_dictionary.py to fasta_dictionary.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/www_blast.py to www_blast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/ACT_example.py to ACT_example.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/clustal_run.py to clustal_run.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/fasta_iterator.py to fasta_iterator.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/getgene.py to getgene.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/REST.py to REST.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/AlignInfo.py to AlignInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Mafft.py to _Mafft.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Prank.py to _Prank.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Dialign.py to _Dialign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Muscle.py to _Muscle.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Probcons.py to _Probcons.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/AbiIO.py to AbiIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PdbIO.py to PdbIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/IgIO.py to IgIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PhdIO.py to PhdIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SwissIO.py to SwissIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/_index.py to _index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/Interfaces.py to Interfaces.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/QualityIO.py to QualityIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/_convert.py to _convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PirIO.py to PirIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/TabIO.py to TabIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SffIO.py to SffIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/AceIO.py to AceIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_io.py to _io.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NeXML.py to NeXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/CDAO.py to CDAO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Consensus.py to Consensus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Newick.py to Newick.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqFeature.py to SeqFeature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/CodonTable.py to CodonTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/SCOPData.py to SCOPData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/IUPACData.py to IUPACData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/Utilities.py to Utilities.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/Trainer.py to Trainer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/MarkovModel.py to MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/Reduced.py to Reduced.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/IUPAC.py to IUPAC.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Des.py to Des.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Dom.py to Dom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Raf.py to Raf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Cla.py to Cla.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Residues.py to Residues.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Hie.py to Hie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/fssp_rec.py to fssp_rec.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/FSSPTools.py to FSSPTools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/NCBIXML.py to NCBIXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/Applications.py to Applications.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CheckSum.py to CheckSum.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/lcc.py to lcc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/ProtParam.py to ProtParam.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/xpktools.py to xpktools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/Graph.py to Graph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/lowess.py to lowess.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/CelFile.py to CelFile.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/utils.py to utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/Scanner.py to Scanner.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/KGML_vis.py to KGML_vis.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/Comparative.py to Comparative.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/Distribution.py to Distribution.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/pairwise2.py to pairwise2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/FreqTable.py to FreqTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/alignace.py to alignace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/thresholds.py to thresholds.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/meme.py to meme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/transfac.py to transfac.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/minimal.py to minimal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/mast.py to mast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/matrix.py to matrix.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/db.py to db.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/Utils.py to Utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/Controller.py to Controller.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Trees.py to Trees.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Nodes.py to Nodes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Nexus.py to Nexus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/StandardData.py to StandardData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqRecord.py to SeqRecord.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Ace.py to Ace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Phd.py to Phd.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Index.py to Index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/dnal.py to dnal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/psw.py to psw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/kNN.py to kNN.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonseq.py to codonseq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonalignment.py to codonalignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/chisq.py to chisq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonalphabet.py to codonalphabet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/pm_fitting.py to pm_fitting.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/phen_micro.py to phen_micro.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Seq.py to Seq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/Parser.py to Parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/GOA.py to GOA.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/Applications.py to Applications.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/Primer3.py to Primer3.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Superimposer.py to Superimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Dice.py to Dice.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBIO.py to PDBIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Polypeptide.py to Polypeptide.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Structure.py to Structure.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/HSExposure.py to HSExposure.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Vector.py to Vector.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Residue.py to Residue.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmcifio.py to mmcifio.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/NACCESS.py to NACCESS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Chain.py to Chain.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBList.py to PDBList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Selection.py to Selection.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/DSSP.py to DSSP.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBParser.py to PDBParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Model.py to Model.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/vectors.py to vectors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PSEA.py to PSEA.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Atom.py to Atom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Entity.py to Entity.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/File.py to File.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/MaxEntropy.py to MaxEntropy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/Interfaces.py to Interfaces.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/NexusIO.py to NexusIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/MafIO.py to MafIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/MauveIO.py to MauveIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/KDTree.py to KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/RanaConfig.py to RanaConfig.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/Restriction.py to Restriction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/PrintFormat.py to PrintFormat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/bgzf.py to bgzf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/triefind.py to triefind.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_index.py to _index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/query.py to query.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/hit.py to hit.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-37.pyc running install_egg_info Copying biopython.egg-info to /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/biopython-1.73.egg-info Skipping SOURCES.txt running install_scripts dh_numpy -ppython-biopython (grep -a -s -v python:Depends debian/python-biopython.substvars; echo "python:Depends=python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9") > debian/python-biopython.substvars.new mv debian/python-biopython.substvars.new debian/python-biopython.substvars dh_numpy3 -ppython3-biopython (grep -a -s -v python3:Depends debian/python3-biopython.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biopython.substvars.new mv debian/python3-biopython.substvars.new debian/python3-biopython.substvars make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_install -a -O--buildsystem=pybuild install -d debian/python-biopython//usr/lib/python2.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python2.7/dist-packages/Bio debian/tmp/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info debian/python-biopython//usr/lib/python2.7/dist-packages/ install -d debian/.debhelper/generated/python-biopython install -d debian/python3-biopython//usr/lib/python3.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python3.7/dist-packages/Bio debian/tmp/usr/lib/python3.7/dist-packages/biopython-1.73.egg-info debian/python3-biopython//usr/lib/python3.7/dist-packages/ install -d debian/.debhelper/generated/python3-biopython install -d debian/.debhelper/generated/python-biopython-doc install -d debian/.debhelper/generated/python-biopython-sql install -d debian/.debhelper/generated/python3-biopython-sql dh_installdocs -a -O--buildsystem=pybuild install -d debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./CONTRIB.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./CONTRIBUTING.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./DEPRECATED.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./NEWS.rst debian/python-biopython/usr/share/doc/python-biopython chown -R 0:0 debian/python-biopython/usr/share/doc chmod -R u\+rw,go=rX debian/python-biopython/usr/share/doc install -p -m0644 debian/README.Debian debian/python-biopython/usr/share/doc/python-biopython/README.Debian install -p -m0644 debian/copyright debian/python-biopython/usr/share/doc/python-biopython/copyright install -d debian/python3-biopython/usr/share/doc/python3-biopython install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright dh_installchangelogs -a -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python-biopython/usr/share/doc/python-biopython/changelog.Debian install -p -m0644 debian/changelog debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian dh_python2 -a -O--buildsystem=pybuild D: dh_python2 dh_python2:393: version: 3.20180927ubuntu2 D: dh_python2 dh_python2:394: argv: ['/usr/share/dh-python/dh_python2', '-a', '-O--buildsystem=pybuild'] D: dh_python2 dh_python2:395: options: {'guess_versions': True, 'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'namespaces': None, 'clean_pycentral': False, 'shebang': None, 'ignore_shebangs': False, 'ignore_namespace': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python2 dh_python2:396: args: [] D: dh_python2 dh_python2:398: supported Python versions: 2.7 (default=2.7) D: dh_python2 debhelper:107: skipping package: python3-biopython D: dh_python2 debhelper:107: skipping package: python3-biopython-sql D: dh_python2 debhelper:153: source=python-biopython, binary packages=['python-biopython'] D: dh_python2 dh_python2:415: processing package python-biopython... D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/File.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Index.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/LogisticRegression.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/MarkovModel.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/MaxEntropy.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/NaiveBayes.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Seq.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqFeature.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqRecord.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/_utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/bgzf.pyc D: dh_python2 tools:230: invoking: python2.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python2 fs:329: renaming cpairwise2.so to cpairwise2.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/kNN.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/pairwise2.pyc I: dh_python2 fs:329: renaming trie.so to trie.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/triefind.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/REST.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_parser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Map/__init__.pyc D: dh_python2 fs:195: removing unwanted: 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debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/AbiIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/AceIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/IgIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/InsdcIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/Interfaces.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/PdbIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/PhdIO.pyc D: dh_python2 fs:195: removing unwanted: 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fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/transfac.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Controller.pyc D: dh_python2 fs:195: removing unwanted: 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removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/Trees.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/__init__.pyc I: dh_python2 fs:329: renaming cnexus.so to cnexus.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: 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debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/UniProt/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/Applications.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/Primer3.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/PrimerSearch.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/AbstractPropertyMap.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Atom.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Chain.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Dice.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Entity.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIFParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Model.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PSEA.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Residue.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/ResidueDepth.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Selection.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Structure.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Superimposer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Vector.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/__init__.pyc I: dh_python2 fs:329: renaming kdtrees.so to kdtrees.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmcifio.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/parse_pdb_header.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/vectors.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.pyc I: dh_python2 fs:329: renaming qcprotmodule.so to qcprot.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/DefaultParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/MafIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/MauveIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.pyc I: dh_python2 fs:329: renaming _CKDTree.so to _CKDTree.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/PrintFormat.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/RanaConfig.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction_Dictionary.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.pyc D: dh_python2 fs:246: package python-biopython details = {'requires.txt': {'debian/python-biopython/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('2.7')}, 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biopython D: dh_python2 pydist:137: trying to find dependency for numpy (python=2.7) D: dh_python2 depends:272: D={'python-numpy', 'python:any (>= 2.7~)', 'python (>= 2.7~)', 'python (<< 2.8)', 'python:any (<< 2.8)', 'python:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20180927ubuntu2 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:107: skipping package: python-biopython D: dh_python3 debhelper:107: skipping package: python-biopython-doc D: dh_python3 debhelper:107: skipping package: python-biopython-sql D: dh_python3 debhelper:153: source=python-biopython, binary packages=['python3-biopython'] D: dh_python3 dh_python3:183: processing package python3-biopython... D: dh_python3 fs:49: moving files from debian/python3-biopython/usr/lib/python3.7/dist-packages to debian/python3-biopython/usr/lib/python3/dist-packages/ D: dh_python3 fs:246: package python3-biopython details = {'requires.txt': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.73.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biopython D: dh_python3 pydist:137: trying to find dependency for numpy (python=None) D: dh_python3 depends:272: D={'python3 (>= 3.7~)', 'python3:any', 'python3-numpy', 'python3 (<< 3.8)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild rm -f debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd ln -s ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd rm -f debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd ln -s ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild cd debian/python-biopython cd debian/python3-biopython chmod a-x usr/share/doc/python-biopython/CONTRIB.rst usr/share/doc/python-biopython/CONTRIBUTING.rst usr/share/doc/python-biopython/DEPRECATED.rst usr/share/doc/python-biopython/NEWS.rst usr/share/doc/python-biopython/changelog.Debian chmod a-x usr/share/doc/python3-biopython/changelog.Debian gzip -9nf usr/share/doc/python-biopython/CONTRIB.rst usr/share/doc/python-biopython/CONTRIBUTING.rst usr/share/doc/python-biopython/DEPRECATED.rst usr/share/doc/python-biopython/NEWS.rst usr/share/doc/python-biopython/changelog.Debian gzip -9nf usr/share/doc/python3-biopython/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' cd '/<>/python-biopython-1.73+dfsg' rm -f debian/python-biopython.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_fixperms find debian/python-biopython -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biopython -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian -name "*.dtd" -exec chmod -x \{\} \; chmod: cannot operate on dangling symlink 'debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd' chmod: cannot operate on dangling symlink 'debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd' make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_missing -a -O--buildsystem=pybuild dh_missing: usr/lib/python3.7/dist-packages/Tests/test_pairwise_aligner.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Muscle_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/common_BioSQL_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Cla.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_Superimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_SeqXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Entrez_parser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_TogoWS.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_align.py exists in 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in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo_networkx.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Pathway.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/search_tests_common.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_features.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output.best.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/requires_internet.py exists in debian/tmp but is not installed to anywhere dh_missing: 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to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phd/phd1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.bz2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/www_blast.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/protein.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/swissprot.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/getgene.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/my_blast.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/alpha.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Plates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/PF05371_seed.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/my_blat.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ec_5.4.2.2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/m_cold.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/beta.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/.flake8 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/simple.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/www_blast.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/getgene.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/swissprot.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/noed.xpk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_pdb.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_motifs.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_advanced.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_kegg.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_annot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_entrez.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_introduction.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_searchio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_graphics.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_quick_start.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_align.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_appendix.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phenotype.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phylo.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cluster.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_popgen.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phylo.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_uniprot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seqio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_testing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_appendix.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cluster.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_learning.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_introduction.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seqio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_blast.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_motifs.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_kegg.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_objects.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_contributing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_graphics.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_align.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_quick_start.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_objects.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_learning.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_entrez.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_annot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_advanced.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cookbook.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_searchio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cookbook.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_contributing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phenotype.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_blast.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_pdb.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_testing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_popgen.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_uniprot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/home/.cache/matplotlib/fontList.json exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: python-biopython (2), python-biopython-doc (0), python-biopython-sql (1), python3-biopython (2), python3-biopython-sql (1) * dh_installdocs: python-biopython (4), python-biopython-doc (4), python-biopython-sql (0), python3-biopython (0), python3-biopython-sql (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a -O--buildsystem=pybuild install -d debian/python-biopython/usr/lib/debug/.dwz/i386-linux-gnu dwz -q -mdebian/python-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python-biopython.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/python-biopython.debug -- debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.i386-linux-gnu.so objcopy --compress-debug-sections debian/python-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python-biopython.debug install -d debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu dwz -q -mdebian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug -- debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-i386-linux-gnu.so objcopy --compress-debug-sections debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug dh_strip -a -O--buildsystem=pybuild install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/10/037cd6916382a55bd3288df5a00af6dcf5e9da.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/10/037cd6916382a55bd3288df5a00af6dcf5e9da.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/10/037cd6916382a55bd3288df5a00af6dcf5e9da.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/10/037cd6916382a55bd3288df5a00af6dcf5e9da.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/71/dac5f07ca01729abb0eceef2fed08afe7ffe34.debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/76/d8c04ab2ec2d1a710cd892b016623cc21580f1.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/71/dac5f07ca01729abb0eceef2fed08afe7ffe34.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/71/dac5f07ca01729abb0eceef2fed08afe7ffe34.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/71/dac5f07ca01729abb0eceef2fed08afe7ffe34.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/76/d8c04ab2ec2d1a710cd892b016623cc21580f1.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/76/d8c04ab2ec2d1a710cd892b016623cc21580f1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/76/d8c04ab2ec2d1a710cd892b016623cc21580f1.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/64/7070acd33f83c1522a96bce89576c3b3ecb39e.debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2d/f1538870f0a3bf3924e4a9c36a425ea5e9b93f.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2d/f1538870f0a3bf3924e4a9c36a425ea5e9b93f.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2d/f1538870f0a3bf3924e4a9c36a425ea5e9b93f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2d/f1538870f0a3bf3924e4a9c36a425ea5e9b93f.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2b objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2b/cf7a5d66290bde309cf13a69abf76c3c5e204d.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/64/7070acd33f83c1522a96bce89576c3b3ecb39e.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/64/7070acd33f83c1522a96bce89576c3b3ecb39e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/64/7070acd33f83c1522a96bce89576c3b3ecb39e.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d2/1037abb57099f50a7ef2a1bb3d3081361392e0.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2b/cf7a5d66290bde309cf13a69abf76c3c5e204d.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2b/cf7a5d66290bde309cf13a69abf76c3c5e204d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/2b/cf7a5d66290bde309cf13a69abf76c3c5e204d.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ba/50fa49885790c708f233947b3e312a3d88a0d7.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d2/1037abb57099f50a7ef2a1bb3d3081361392e0.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d2/1037abb57099f50a7ef2a1bb3d3081361392e0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d2/1037abb57099f50a7ef2a1bb3d3081361392e0.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/ce/3589a210280faca4ced21625cfd3397153f1aa.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/ce/3589a210280faca4ced21625cfd3397153f1aa.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/ce/3589a210280faca4ced21625cfd3397153f1aa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ba/50fa49885790c708f233947b3e312a3d88a0d7.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ba/50fa49885790c708f233947b3e312a3d88a0d7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/ce/3589a210280faca4ced21625cfd3397153f1aa.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ba/50fa49885790c708f233947b3e312a3d88a0d7.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/cb objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/cb/b7a26a32c0ae6e97282249ecac3b84be06ac17.debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e7/181f570b7dd92b1d327065e388b9566f1abfd7.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/cb/b7a26a32c0ae6e97282249ecac3b84be06ac17.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/cb/b7a26a32c0ae6e97282249ecac3b84be06ac17.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e7/181f570b7dd92b1d327065e388b9566f1abfd7.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e7/181f570b7dd92b1d327065e388b9566f1abfd7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/cb/b7a26a32c0ae6e97282249ecac3b84be06ac17.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e7/181f570b7dd92b1d327065e388b9566f1abfd7.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/b8/b47debf4396f44c15aaaef3a775e0633f9754c.debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/4c/276654358b73a775320d9d4a1880f7b0fa63ad.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/4c/276654358b73a775320d9d4a1880f7b0fa63ad.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/4c/276654358b73a775320d9d4a1880f7b0fa63ad.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/4c/276654358b73a775320d9d4a1880f7b0fa63ad.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/b8/b47debf4396f44c15aaaef3a775e0633f9754c.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/b8/b47debf4396f44c15aaaef3a775e0633f9754c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/b8/b47debf4396f44c15aaaef3a775e0633f9754c.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/734d6605daed8165cb831abb6eb0db1680c24f.debug install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/55 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/55/95044e41fecb091e37210446bc2a4860e34fdd.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/734d6605daed8165cb831abb6eb0db1680c24f.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/734d6605daed8165cb831abb6eb0db1680c24f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/55/95044e41fecb091e37210446bc2a4860e34fdd.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/55/95044e41fecb091e37210446bc2a4860e34fdd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/734d6605daed8165cb831abb6eb0db1680c24f.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/55/95044e41fecb091e37210446bc2a4860e34fdd.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ee/7cf91a332add67186fccc52c63049dd643c5fe.debug install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.i386-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/ec412d248f1a5520f92808152e485c9611bc7e.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ee/7cf91a332add67186fccc52c63049dd643c5fe.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ee/7cf91a332add67186fccc52c63049dd643c5fe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ee/7cf91a332add67186fccc52c63049dd643c5fe.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/ec412d248f1a5520f92808152e485c9611bc7e.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/ec412d248f1a5520f92808152e485c9611bc7e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/ec412d248f1a5520f92808152e485c9611bc7e.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8f/ddc7bf50beebaba433ec6e207ff3020d3a12aa.debug install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python-biopython/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python-biopython/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python-biopython/usr/lib/debug install -d debian/.debhelper/python-biopython/dbgsym-root/usr/share/doc ln -s python-biopython debian/.debhelper/python-biopython/dbgsym-root/usr/share/doc/python-biopython-dbgsym chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8f/ddc7bf50beebaba433ec6e207ff3020d3a12aa.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8f/ddc7bf50beebaba433ec6e207ff3020d3a12aa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8f/ddc7bf50beebaba433ec6e207ff3020d3a12aa.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-biopython/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biopython/usr/lib/debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc ln -s python3-biopython debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc/python3-biopython-dbgsym dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python-biopython/DEBIAN/shlibs rm -f debian/python3-biopython/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -d debian/python-biopython/DEBIAN dpkg-shlibdeps -Tdebian/python-biopython.substvars debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.i386-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.i386-linux-gnu.so install -d debian/python3-biopython/DEBIAN dpkg-shlibdeps -Tdebian/python3-biopython.substvars debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-i386-linux-gnu.so dh_installdeb -a -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python-biopython/DEBIAN/postinst cat debian/python-biopython.postinst.debhelper >> debian/python-biopython/DEBIAN/postinst chmod 0755 -- debian/python-biopython/DEBIAN/postinst chown 0:0 -- debian/python-biopython/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biopython/DEBIAN/prerm cat debian/python-biopython.prerm.debhelper >> debian/python-biopython/DEBIAN/prerm chmod 0755 -- debian/python-biopython/DEBIAN/prerm chown 0:0 -- debian/python-biopython/DEBIAN/prerm printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/postinst cat debian/python3-biopython.postinst.debhelper >> debian/python3-biopython/DEBIAN/postinst chmod 0755 -- debian/python3-biopython/DEBIAN/postinst chown 0:0 -- debian/python3-biopython/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/prerm cat debian/python3-biopython.prerm.debhelper >> debian/python3-biopython/DEBIAN/prerm chmod 0755 -- debian/python3-biopython/DEBIAN/prerm chown 0:0 -- debian/python3-biopython/DEBIAN/prerm dh_gencontrol -a -O--buildsystem=pybuild echo misc:Depends= >> debian/python-biopython.substvars echo misc:Pre-Depends= >> debian/python-biopython.substvars install -d debian/.debhelper/python-biopython/dbgsym-root/DEBIAN dpkg-gencontrol -ppython-biopython -ldebian/changelog -Tdebian/python-biopython.substvars -Pdebian/.debhelper/python-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python-biopython-dbgsym "-DDepends=python-biopython (= \${binary:Version})" "-DDescription=debug symbols for python-biopython" "-DBuild-Ids=10037cd6916382a55bd3288df5a00af6dcf5e9da 5595044e41fecb091e37210446bc2a4860e34fdd 647070acd33f83c1522a96bce89576c3b3ecb39e 71dac5f07ca01729abb0eceef2fed08afe7ffe34 9fec412d248f1a5520f92808152e485c9611bc7e b8b47debf4396f44c15aaaef3a775e0633f9754c cbb7a26a32c0ae6e97282249ecac3b84be06ac17 ce3589a210280faca4ced21625cfd3397153f1aa d21037abb57099f50a7ef2a1bb3d3081361392e0" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/python3-biopython.substvars echo misc:Pre-Depends= >> debian/python3-biopython.substvars install -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -Pdebian/.debhelper/python3-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-biopython-dbgsym "-DDepends=python3-biopython (= \${binary:Version})" "-DDescription=debug symbols for python3-biopython" "-DBuild-Ids=2bcf7a5d66290bde309cf13a69abf76c3c5e204d 2df1538870f0a3bf3924e4a9c36a425ea5e9b93f 4c276654358b73a775320d9d4a1880f7b0fa63ad 76d8c04ab2ec2d1a710cd892b016623cc21580f1 8fddc7bf50beebaba433ec6e207ff3020d3a12aa ba50fa49885790c708f233947b3e312a3d88a0d7 bb734d6605daed8165cb831abb6eb0db1680c24f e7181f570b7dd92b1d327065e388b9566f1abfd7 ee7cf91a332add67186fccc52c63049dd643c5fe" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Provides} unused, but is defined chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -Pdebian/python3-biopython -UMulti-Arch dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython-biopython -ldebian/changelog -Tdebian/python-biopython.substvars -Pdebian/python-biopython -UMulti-Arch dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/python3-biopython/DEBIAN/control chown 0:0 -- debian/python3-biopython/DEBIAN/control dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/python-biopython/DEBIAN/control chown 0:0 -- debian/python-biopython/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums chown 0:0 -- debian/python3-biopython/DEBIAN/md5sums chmod 0644 -- debian/python-biopython/DEBIAN/md5sums chown 0:0 -- debian/python-biopython/DEBIAN/md5sums cd debian/.debhelper/python-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/python3-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --build debian/python-biopython .. dpkg-deb --build debian/python3-biopython .. install -d debian/.debhelper/scratch-space/build-python-biopython dpkg-deb --build debian/.debhelper/python-biopython/dbgsym-root debian/.debhelper/scratch-space/build-python-biopython install -d debian/.debhelper/scratch-space/build-python3-biopython dpkg-deb --build debian/.debhelper/python3-biopython/dbgsym-root debian/.debhelper/scratch-space/build-python3-biopython INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-biopython (in debian/python3-biopython); do_strip: , oemstrip: pkgstriptranslations: processing python-biopython (in debian/python-biopython); do_strip: , oemstrip: pkgstriptranslations: processing python3-biopython-dbgsym (in debian/.debhelper/python3-biopython/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing python-biopython-dbgsym (in debian/.debhelper/python-biopython/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python3-biopython/DEBIAN/control, package python3-biopython, directory debian/python3-biopython INFO: pkgstripfiles: waiting for lock (python3-biopython) ... pkgstripfiles: processing control file: debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control, package python-biopython-dbgsym, directory debian/.debhelper/python-biopython/dbgsym-root dpkg-deb: building package 'python-biopython-dbgsym' in 'debian/.debhelper/scratch-space/build-python-biopython/python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.deb'. Renaming python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.deb to python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb mv debian/.debhelper/scratch-space/build-python-biopython/python-biopython-dbgsym_1.73\+dfsg-1ubuntu1_i386.deb ../python-biopython-dbgsym_1.73\+dfsg-1ubuntu1_i386.ddeb INFO: pkgstripfiles: waiting for lock (python3-biopython) ... INFO: pkgstripfiles: waiting for lock (python3-biopython) ... INFO: pkgstripfiles: waiting for lock (python3-biopython) ... INFO: pkgstripfiles: waiting for lock (python3-biopython) ... pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python-biopython/DEBIAN/control, package python-biopython, directory debian/python-biopython INFO: pkgstripfiles: waiting for lock (python3-biopython) ... pkgstripfiles: Truncating usr/share/doc/python-biopython/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-biopython ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-biopython' in '../python-biopython_1.73+dfsg-1ubuntu1_i386.deb'. pkgstripfiles: Truncating usr/share/doc/python3-biopython/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-biopython ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.73+dfsg-1ubuntu1_i386.deb'. pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control, package python3-biopython-dbgsym, directory debian/.debhelper/python3-biopython/dbgsym-root dpkg-deb: building package 'python3-biopython-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-biopython/python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.deb'. Renaming python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.deb to python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb mv debian/.debhelper/scratch-space/build-python3-biopython/python3-biopython-dbgsym_1.73\+dfsg-1ubuntu1_i386.deb ../python3-biopython-dbgsym_1.73\+dfsg-1ubuntu1_i386.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../python-biopython_1.73+dfsg-1ubuntu1_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190304-2001 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ python-biopython_1.73+dfsg-1ubuntu1_i386.changes: ------------------------------------------------- Format: 1.8 Date: Mon, 04 Mar 2019 12:21:32 -0700 Source: python-biopython Binary: python-biopython python3-biopython Architecture: i386 Version: 1.73+dfsg-1ubuntu1 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Adam Conrad Description: python-biopython - Python library for bioinformatics (implemented in Python 2) python3-biopython - Python library for bioinformatics (implemented in Python 3) Changes: python-biopython (1.73+dfsg-1ubuntu1) disco; urgency=medium . * debian/patches/test_phenotype_fit-ppc64el.patch: - reduce precision on one test, per upstream recommendation at: https://github.com/biopython/biopython/issues/1945 Checksums-Sha1: ff4a746a04d09dbb740923bcab073d35a3b5a3dd 269904 python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb 8837a7170e91f3062220218f50df39184ce9ab3f 13958 python-biopython_1.73+dfsg-1ubuntu1_i386.buildinfo dd9ee8e70e68f63b5e3748298cb38a9a0ba6aa8c 1329648 python-biopython_1.73+dfsg-1ubuntu1_i386.deb d2d32eb917cd4fca53dad4d354855711eead337a 290644 python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb 7abba0256f9790c0aa7cf2e33bbb3c1f53d0acad 1283932 python3-biopython_1.73+dfsg-1ubuntu1_i386.deb Checksums-Sha256: 6241fb98bbd5726376aeb36db123bd4c63c8c7d8fc4e99250971250aa709868a 269904 python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb b7918c5b5c1aae70d13bb6a40e9b805f13e1bc270892f5a7008d94a7de20abff 13958 python-biopython_1.73+dfsg-1ubuntu1_i386.buildinfo 19e6eefa37cef6fbca29e607eb091dc43ca7df5d2f782858e9f9d89c80e3ab3d 1329648 python-biopython_1.73+dfsg-1ubuntu1_i386.deb 3b341d701d7613633e50d1fdf6c11293662682fd9280358b7c6d8225741ae60e 290644 python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb fefbbfb4140de027699983297632733691d27a6588988e04b9a6872eb29bfc54 1283932 python3-biopython_1.73+dfsg-1ubuntu1_i386.deb Files: 060b422c46f81a55bc46cb0c002c73fb 269904 debug optional python-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb 5b043faf24caa368d0c82e5d78c873ba 13958 python optional python-biopython_1.73+dfsg-1ubuntu1_i386.buildinfo e9e5efe4fcad05424c8468ce7e8903d1 1329648 python optional python-biopython_1.73+dfsg-1ubuntu1_i386.deb a5bdfe83ebbb37f4ed02f27f497ea224 290644 debug optional python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_i386.ddeb 39f2efc36f251894953489c48069212d 1283932 python optional python3-biopython_1.73+dfsg-1ubuntu1_i386.deb Original-Maintainer: Debian Med Packaging Team +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python-biopython_1.73+dfsg-1ubuntu1_i386.deb -------------------------------------------- new debian package, version 2.0. size 1329648 bytes: control archive=15808 bytes. 1560 bytes, 27 lines control 56263 bytes, 591 lines md5sums 166 bytes, 9 lines * postinst #!/bin/sh 271 bytes, 14 lines * prerm #!/bin/sh Package: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: i386 Maintainer: Ubuntu Developers Installed-Size: 8967 Depends: python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9, python (<< 2.8), python (>= 2.7~), python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.4), python-reportlab Recommends: python-biopython-doc (= 1.73+dfsg-1ubuntu1), ncbi-blast+ Suggests: python-tk, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, phylip, phyml, prank, probcons, python-mysqldb, python-matplotlib, python-pil, python-rdflib (>= 4), python-renderpm, python-psycopg2, python-scipy, raxml, samtools, t-coffee, wise (>= 2.4.1-16), w3-dtd-mathml Section: python Priority: optional Homepage: http://biopython.org Description: Python library for bioinformatics (implemented in Python 2) The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. . This package is targeting Python version 2. 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It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. . This package is targeting Python version 3. 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python-biopython_1.73+dfsg-1ubuntu1.dsc Machine Architecture: amd64 Package: python-biopython Package-Time: 874 Source-Version: 1.73+dfsg-1ubuntu1 Space: 418208 Status: successful Version: 1.73+dfsg-1ubuntu1 -------------------------------------------------------------------------------- Finished at 20190304-2001 Build needed 00:14:34, 418208k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-16447224 Scanning for processes to kill in build PACKAGEBUILD-16447224