https://launchpad.net/ubuntu/+source/python-biopython/1.73+dfsg-1ubuntu1/+build/16447221 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-038 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:45 UTC 2019 x86_64 Buildd toolchain package versions: launchpad-buildd_167 python-lpbuildd_167 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 4 Mar 19:45:53 ntpdate[1816]: adjust time server 10.211.37.1 offset 0.035510 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16447221 --image-type chroot /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-16447221 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16447221 Starting target for build PACKAGEBUILD-16447221 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16447221 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16447221 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16447221 Updating target for build PACKAGEBUILD-16447221 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [992 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [9113 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5259 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [129 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [48.1 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [569 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [146 kB] Fetched 17.2 MB in 4s (3933 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: gcc-9-base libreadline8 The following packages will be upgraded: adduser apt base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils build-essential ca-certificates coreutils cpp cpp-8 dash debconf debianutils diffutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++ g++-8 gcc gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libattr1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libjson-c3 liblsan0 liblz4-1 liblzma5 libmount1 libmpfr6 libmpx2 libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libperl5.28 libpng16-16 libprocps7 libquadmath0 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.28 pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux xz-utils zlib1g 128 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 75.9 MB of archives. After this operation, 7026 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 debianutils amd64 4.8.6.1 [85.5 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main amd64 bash amd64 5.0-2ubuntu1 [644 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 bsdutils amd64 1:2.33.1-0.1ubuntu2 [63.8 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 coreutils amd64 8.30-1ubuntu1 [1243 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-5 [243 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg amd64 1.19.5ubuntu1 [1127 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 libperl5.28 amd64 5.28.1-4 [3834 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 perl amd64 5.28.1-4 [204 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 perl-base amd64 5.28.1-4 [1512 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 perl-modules-5.28 all 5.28.1-4 [2811 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libc-dev-bin amd64 2.29-0ubuntu1 [71.1 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libc6-dev amd64 2.29-0ubuntu1 [2544 kB] Get:13 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libc6 amd64 2.29-0ubuntu1 [2709 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libc-bin amd64 2.29-0ubuntu1 [622 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 linux-libc-dev amd64 4.19.0-13.14 [1074 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-9-base amd64 9-20190227-0ubuntu1 [17.0 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc1 amd64 1:9-20190227-0ubuntu1 [40.2 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.3 [672 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm6 amd64 1.18.1-3 [27.7 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm-compat4 amd64 1.18.1-3 [6156 B] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 zlib1g amd64 1:1.2.11.dfsg-1ubuntu2 [54.0 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 debconf all 1.5.71 [122 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-4ubuntu1 [85.8 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 diffutils amd64 1:3.7-2 [200 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 findutils amd64 4.6.0+git+20190209-2 [329 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.3-1 [149 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 gzip amd64 1.9-3 [93.8 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsmartcols1 amd64 2.33.1-0.1ubuntu2 [92.1 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libuuid1 amd64 2.33.1-0.1ubuntu2 [21.0 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libblkid1 amd64 2.33.1-0.1ubuntu2 [134 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libfdisk1 amd64 2.33.1-0.1ubuntu2 [173 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmount1 amd64 2.33.1-0.1ubuntu2 [145 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libncurses6 amd64 6.1+20181013-2ubuntu2 [101 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libtinfo6 amd64 6.1+20181013-2ubuntu2 [83.8 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 libncursesw6 amd64 6.1+20181013-2ubuntu2 [131 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 fdisk amd64 2.33.1-0.1ubuntu2 [119 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 login amd64 1:4.5-1.1ubuntu1 [264 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 util-linux amd64 2.33.1-0.1ubuntu2 [1002 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 ncurses-bin amd64 6.1+20181013-2ubuntu2 [164 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libdebconfclient0 amd64 0.247ubuntu1 [6424 B] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 base-passwd amd64 3.5.46 [47.4 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main amd64 libnettle6 amd64 3.4.1-1 [110 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libhogweed4 amd64 3.4.1-1 [140 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 libp11-kit0 amd64 0.23.15-2 [184 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 liblz4-1 amd64 1.8.3-1ubuntu1 [71.7 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 liblzma5 amd64 5.2.4-1 [92.4 kB] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++6 amd64 9-20190227-0ubuntu1 [509 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 libudev1 amd64 240-6ubuntu1 [69.5 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libzstd1 amd64 1.3.8+dfsg-3 [226 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libapt-pkg5.0 amd64 1.8.0~rc4 [822 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 libpam0g amd64 1.3.1-5ubuntu1 [56.2 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-2 [7016 B] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-2 [85.2 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 libpam-modules-bin amd64 1.3.1-5ubuntu1 [38.1 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 libpam-modules amd64 1.3.1-5ubuntu1 [248 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 passwd amd64 1:4.5-1.1ubuntu1 [816 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 adduser all 3.118ubuntu1 [163 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libgpg-error0 amd64 1.35-1 [57.7 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 gpgv amd64 2.2.12-1ubuntu3 [197 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 apt amd64 1.8.0~rc4 [1211 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 systemd-sysv amd64 240-6ubuntu1 [9380 B] Get:66 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libacl1 amd64 2.2.53-4 [18.3 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libcap2 amd64 1:2.25-2 [13.3 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.2 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libjson-c3 amd64 0.12.1+ds-2 [22.2 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libssl1.1 amd64 1.1.1b-1ubuntu1 [1300 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 libcryptsetup12 amd64 2:2.1.0-1ubuntu1 [148 kB] Get:72 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libip4tc0 amd64 1.8.2-3ubuntu1 [20.8 kB] Get:73 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 mount amd64 2.33.1-0.1ubuntu2 [113 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 systemd amd64 240-6ubuntu1 [3328 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 libsystemd0 amd64 240-6ubuntu1 [248 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56+nmu1 [6080 B] Get:79 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libattr1 amd64 1:2.4.48-4 [12.6 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-2 [11.0 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB] Get:82 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libubsan1 amd64 9-20190227-0ubuntu1 [130 kB] Get:83 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtsan0 amd64 9-20190227-0ubuntu1 [301 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr6 amd64 4.0.2-1 [240 kB] Get:85 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++-8 amd64 8.3.0-2ubuntu1 [10.0 MB] Get:86 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8 amd64 8.3.0-2ubuntu1 [9748 kB] Get:87 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 cpp-8 amd64 8.3.0-2ubuntu1 [8885 kB] Get:88 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcc1-0 amd64 9-20190227-0ubuntu1 [48.0 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.32-4ubuntu1 [1851 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main amd64 libbinutils amd64 2.32-4ubuntu1 [470 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main amd64 binutils amd64 2.32-4ubuntu1 [3392 B] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-common amd64 2.32-4ubuntu1 [200 kB] Get:93 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgomp1 amd64 9-20190227-0ubuntu1 [89.0 kB] Get:94 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libitm1 amd64 9-20190227-0ubuntu1 [27.9 kB] Get:95 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libatomic1 amd64 9-20190227-0ubuntu1 [9232 B] Get:96 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libasan5 amd64 9-20190227-0ubuntu1 [394 kB] Get:97 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblsan0 amd64 9-20190227-0ubuntu1 [139 kB] Get:98 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmpx2 amd64 8.3.0-2ubuntu1 [11.7 kB] Get:99 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libquadmath0 amd64 9-20190227-0ubuntu1 [145 kB] Get:100 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++-8-dev amd64 8.3.0-2ubuntu1 [1542 kB] Get:101 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc-8-dev amd64 8.3.0-2ubuntu1 [2307 kB] Get:102 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8-base amd64 8.3.0-2ubuntu1 [18.7 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 libprocps7 amd64 2:3.3.15-2ubuntu2 [32.8 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main amd64 lsb-base all 10.2018112800ubuntu1 [12.6 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 procps amd64 2:3.3.15-2ubuntu2 [231 kB] Get:108 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openssl amd64 1.1.1b-1ubuntu1 [622 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 ca-certificates all 20190110 [146 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 readline-common all 8.0-1 [53.4 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main amd64 libreadline8 amd64 8.0-1 [130 kB] Get:112 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.27.2-1 [533 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018i-2 [187 kB] Get:114 http://ftpmaster.internal/ubuntu disco/main amd64 xz-utils amd64 5.2.4-1 [82.5 kB] Get:115 http://ftpmaster.internal/ubuntu disco/main amd64 libpng16-16 amd64 1.6.36-5 [179 kB] Get:116 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 multiarch-support amd64 2.29-0ubuntu1 [6916 B] Get:117 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++ amd64 4:8.3.0-1ubuntu1 [1600 B] Get:118 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc amd64 4:8.3.0-1ubuntu1 [5216 B] Get:119 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 cpp amd64 4:8.3.0-1ubuntu1 [27.6 kB] Get:120 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg-dev all 1.19.5ubuntu1 [666 kB] Get:121 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdpkg-perl all 1.19.5ubuntu1 [230 kB] Get:122 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 build-essential amd64 12.6ubuntu1 [4664 B] Get:123 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 gpg amd64 2.2.12-1ubuntu3 [475 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main amd64 gpgconf amd64 2.2.12-1ubuntu3 [123 kB] Get:127 http://ftpmaster.internal/ubuntu disco/main amd64 gpg-agent amd64 2.2.12-1ubuntu3 [229 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:129 http://ftpmaster.internal/ubuntu disco/main amd64 optipng amd64 0.7.7-1 [83.9 kB] Get:130 http://ftpmaster.internal/ubuntu disco/main amd64 pkgbinarymangler all 144 [55.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 75.9 MB in 1s (50.9 MB/s) (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_amd64.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bash_5.0-2ubuntu1_amd64.deb ... Unpacking bash (5.0-2ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-2ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu2_amd64.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu2) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu2) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_amd64.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-5_amd64.deb ... Unpacking tar (1.30+dfsg-5) over (1.30+dfsg-3) ... Setting up tar (1.30+dfsg-5) ... (Reading database ... 12664 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.5ubuntu1_amd64.deb ... Unpacking dpkg (1.19.5ubuntu1) over (1.19.2ubuntu1) ... Setting up dpkg (1.19.5ubuntu1) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... 12669 files and directories currently installed.) Preparing to unpack .../libperl5.28_5.28.1-4_amd64.deb ... Unpacking libperl5.28:amd64 (5.28.1-4) over (5.28.1-3) ... Preparing to unpack .../perl_5.28.1-4_amd64.deb ... Unpacking perl (5.28.1-4) over (5.28.1-3) ... Preparing to unpack .../perl-base_5.28.1-4_amd64.deb ... Unpacking perl-base (5.28.1-4) over (5.28.1-3) ... Setting up perl-base (5.28.1-4) ... (Reading database ... 12667 files and directories currently installed.) Preparing to unpack .../perl-modules-5.28_5.28.1-4_all.deb ... Unpacking perl-modules-5.28 (5.28.1-4) over (5.28.1-3) ... Preparing to unpack .../libc-dev-bin_2.29-0ubuntu1_amd64.deb ... Unpacking libc-dev-bin (2.29-0ubuntu1) over (2.28-0ubuntu1) ... Preparing to unpack .../libc6-dev_2.29-0ubuntu1_amd64.deb ... Unpacking libc6-dev:amd64 (2.29-0ubuntu1) over (2.28-0ubuntu1) ... Preparing to unpack .../libc6_2.29-0ubuntu1_amd64.deb ... Unpacking libc6:amd64 (2.29-0ubuntu1) over (2.28-0ubuntu1) ... Setting up libc6:amd64 (2.29-0ubuntu1) ... (Reading database ... 12687 files and directories currently installed.) Preparing to unpack .../libc-bin_2.29-0ubuntu1_amd64.deb ... Unpacking libc-bin (2.29-0ubuntu1) over (2.28-0ubuntu1) ... Setting up libc-bin (2.29-0ubuntu1) ... (Reading database ... 12687 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_4.19.0-13.14_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.19.0-13.14) over (4.18.0-11.12) ... Selecting previously unselected package gcc-9-base:amd64. Preparing to unpack .../gcc-9-base_9-20190227-0ubuntu1_amd64.deb ... Unpacking gcc-9-base:amd64 (9-20190227-0ubuntu1) ... Setting up gcc-9-base:amd64 (9-20190227-0ubuntu1) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a9-20190227-0ubuntu1_amd64.deb ... Unpacking libgcc1:amd64 (1:9-20190227-0ubuntu1) over (1:8.2.0-12ubuntu1) ... Setting up libgcc1:amd64 (1:9-20190227-0ubuntu1) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libdb5.3_5.3.28+dfsg1-0.3_amd64.deb ... Unpacking libdb5.3:amd64 (5.3.28+dfsg1-0.3) over (5.3.28+dfsg1-0.2) ... Setting up libdb5.3:amd64 (5.3.28+dfsg1-0.3) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libgdbm6_1.18.1-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.18.1-3) over (1.18.1-2) ... Preparing to unpack .../libgdbm-compat4_1.18.1-3_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.18.1-3) over (1.18.1-2) ... Preparing to unpack .../zlib1g_1%3a1.2.11.dfsg-1ubuntu2_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.11.dfsg-1ubuntu2) over (1:1.2.11.dfsg-0ubuntu2) ... Setting up zlib1g:amd64 (1:1.2.11.dfsg-1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../debconf_1.5.71_all.deb ... Unpacking debconf (1.5.71) over (1.5.69) ... Setting up debconf (1.5.71) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-4ubuntu1_amd64.deb ... Unpacking dash (0.5.10.2-4ubuntu1) over (0.5.10.2-2) ... Setting up dash (0.5.10.2-4ubuntu1) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.7-2_amd64.deb ... Unpacking diffutils (1:3.7-2) over (1:3.6-1) ... Setting up diffutils (1:3.7-2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../findutils_4.6.0+git+20190209-2_amd64.deb ... Unpacking findutils (4.6.0+git+20190209-2) over (4.6.0+git+20181018-1) ... Setting up findutils (4.6.0+git+20190209-2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../archives/grep_3.3-1_amd64.deb ... Unpacking grep (3.3-1) over (3.1-3) ... Setting up grep (3.3-1) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.9-3_amd64.deb ... Unpacking gzip (1.9-3) over (1.6-5ubuntu2) ... Setting up gzip (1.9-3) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking libsmartcols1:amd64 (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libsmartcols1:amd64 (2.33.1-0.1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libuuid1_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking libuuid1:amd64 (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libuuid1:amd64 (2.33.1-0.1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libblkid1_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking libblkid1:amd64 (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libblkid1:amd64 (2.33.1-0.1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking libfdisk1:amd64 (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libfdisk1:amd64 (2.33.1-0.1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libmount1_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking libmount1:amd64 (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libmount1:amd64 (2.33.1-0.1ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libncurses6_6.1+20181013-2ubuntu2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Preparing to unpack .../libtinfo6_6.1+20181013-2ubuntu2_amd64.deb ... Unpacking libtinfo6:amd64 (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up libtinfo6:amd64 (6.1+20181013-2ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20181013-2ubuntu2_amd64.deb ... Unpacking libncursesw6:amd64 (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up libncursesw6:amd64 (6.1+20181013-2ubuntu2) ... (Reading database ... 12696 files and directories currently installed.) Preparing to unpack .../fdisk_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking fdisk (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up fdisk (2.33.1-0.1ubuntu2) ... (Reading database ... 12699 files and directories currently installed.) Preparing to unpack .../util-linux_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking util-linux (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Replacing files in old package login (1:4.5-1ubuntu1) ... Preparing to unpack .../login_1%3a4.5-1.1ubuntu1_amd64.deb ... Unpacking login (1:4.5-1.1ubuntu1) over (1:4.5-1ubuntu1) ... Setting up login (1:4.5-1.1ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.1+20181013-2ubuntu2_amd64.deb ... Unpacking ncurses-bin (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up ncurses-bin (6.1+20181013-2ubuntu2) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../archives/sed_4.7-1_amd64.deb ... Unpacking sed (4.7-1) over (4.5-2) ... Setting up sed (4.7-1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.247ubuntu1_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.247ubuntu1) over (0.244ubuntu1) ... Setting up libdebconfclient0:amd64 (0.247ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.46_amd64.deb ... Unpacking base-passwd (3.5.46) over (3.5.45) ... Setting up base-passwd (3.5.46) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.56+nmu1_all.deb ... Unpacking init-system-helpers (1.56+nmu1) over (1.56) ... Setting up init-system-helpers (1.56+nmu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.1+20181013-2ubuntu2_all.deb ... Unpacking ncurses-base (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up ncurses-base (6.1+20181013-2ubuntu2) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libnettle6_3.4.1-1_amd64.deb ... Unpacking libnettle6:amd64 (3.4.1-1) over (3.4.1~rc1-1) ... Setting up libnettle6:amd64 (3.4.1-1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libhogweed4_3.4.1-1_amd64.deb ... Unpacking libhogweed4:amd64 (3.4.1-1) over (3.4.1~rc1-1) ... Setting up libhogweed4:amd64 (3.4.1-1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.15-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.23.15-2) over (0.23.14-2) ... Setting up libp11-kit0:amd64 (0.23.15-2) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.5-2ubuntu1_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.5-2ubuntu1) over (3.6.4-2ubuntu2) ... Setting up libgnutls30:amd64 (3.6.5-2ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.8.3-1ubuntu1_amd64.deb ... Unpacking liblz4-1:amd64 (1.8.3-1ubuntu1) over (1.8.2-1ubuntu1) ... Setting up liblz4-1:amd64 (1.8.3-1ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.4-1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.4-1) over (5.2.2-1.3) ... Setting up liblzma5:amd64 (5.2.4-1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libstdc++6_9-20190227-0ubuntu1_amd64.deb ... Unpacking libstdc++6:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Setting up libstdc++6:amd64 (9-20190227-0ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libudev1_240-6ubuntu1_amd64.deb ... Unpacking libudev1:amd64 (240-6ubuntu1) over (239-7ubuntu15) ... Setting up libudev1:amd64 (240-6ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libzstd1_1.3.8+dfsg-3_amd64.deb ... Unpacking libzstd1:amd64 (1.3.8+dfsg-3) over (1.3.5+dfsg-1ubuntu1) ... Setting up libzstd1:amd64 (1.3.8+dfsg-3) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.8.0~rc4_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.8.0~rc4) over (1.8.0~alpha2ubuntu1) ... Setting up libapt-pkg5.0:amd64 (1.8.0~rc4) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libpam0g_1.3.1-5ubuntu1_amd64.deb ... Unpacking libpam0g:amd64 (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam0g:amd64 (1.3.1-5ubuntu1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.8-2_all.deb ... Unpacking libsemanage-common (2.8-2) over (2.8-1build2) ... Setting up libsemanage-common (2.8-2) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.8-2_amd64.deb ... Unpacking libsemanage1:amd64 (2.8-2) over (2.8-1build2) ... Setting up libsemanage1:amd64 (2.8-2) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.3.1-5ubuntu1_amd64.deb ... Unpacking libpam-modules-bin (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-modules-bin (1.3.1-5ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.3.1-5ubuntu1_amd64.deb ... Unpacking libpam-modules:amd64 (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-modules:amd64 (1.3.1-5ubuntu1) ... Installing new version of config file /etc/security/access.conf ... Installing new version of config file /etc/security/limits.conf ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.5-1.1ubuntu1_amd64.deb ... Unpacking passwd (1:4.5-1.1ubuntu1) over (1:4.5-1ubuntu1) ... Setting up passwd (1:4.5-1.1ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../adduser_3.118ubuntu1_all.deb ... Unpacking adduser (3.118ubuntu1) over (3.117ubuntu1) ... Setting up adduser (3.118ubuntu1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.35-1_amd64.deb ... Unpacking libgpg-error0:amd64 (1.35-1) over (1.32-3) ... Setting up libgpg-error0:amd64 (1.35-1) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.12-1ubuntu3_amd64.deb ... Unpacking gpgv (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Setting up gpgv (2.2.12-1ubuntu3) ... (Reading database ... 12703 files and directories currently installed.) Preparing to unpack .../apt_1.8.0~rc4_amd64.deb ... Unpacking apt (1.8.0~rc4) over (1.8.0~alpha2ubuntu1) ... Setting up apt (1.8.0~rc4) ... (Reading database ... 12714 files and directories currently installed.) Preparing to unpack .../systemd-sysv_240-6ubuntu1_amd64.deb ... Unpacking systemd-sysv (240-6ubuntu1) over (239-7ubuntu15) ... Preparing to unpack .../libacl1_2.2.53-4_amd64.deb ... Unpacking libacl1:amd64 (2.2.53-4) over (2.2.52-3build1) ... Setting up libacl1:amd64 (2.2.53-4) ... (Reading database ... 12714 files and directories currently installed.) Preparing to unpack .../0-libcap2_1%3a2.25-2_amd64.deb ... Unpacking libcap2:amd64 (1:2.25-2) over (1:2.25-1.2) ... Preparing to unpack .../1-libargon2-1_0~20171227-0.2_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2) over (0~20171227-0.1) ... Preparing to unpack .../2-libjson-c3_0.12.1+ds-2_amd64.deb ... Unpacking libjson-c3:amd64 (0.12.1+ds-2) over (0.12.1-1.3) ... Preparing to unpack .../3-libssl1.1_1.1.1b-1ubuntu1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1b-1ubuntu1) over (1.1.1a-1ubuntu2) ... Preparing to unpack .../4-libcryptsetup12_2%3a2.1.0-1ubuntu1_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.1.0-1ubuntu1) over (2:2.0.4-2ubuntu2) ... Preparing to unpack .../5-libip4tc0_1.8.2-3ubuntu1_amd64.deb ... Unpacking libip4tc0:amd64 (1.8.2-3ubuntu1) over (1.6.1-2ubuntu3) ... Preparing to unpack .../6-mount_2.33.1-0.1ubuntu2_amd64.deb ... Unpacking mount (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Preparing to unpack .../7-systemd_240-6ubuntu1_amd64.deb ... Unpacking systemd (240-6ubuntu1) over (239-7ubuntu15) ... Preparing to unpack .../8-libsystemd0_240-6ubuntu1_amd64.deb ... Unpacking libsystemd0:amd64 (240-6ubuntu1) over (239-7ubuntu15) ... Setting up libsystemd0:amd64 (240-6ubuntu1) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.5-1_amd64.deb ... Unpacking libext2fs2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Setting up libext2fs2:amd64 (1.44.5-1) ... (Reading database ... 12730 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.5-1_amd64.deb ... Unpacking e2fsprogs (1.44.5-1) over (1.44.4-2ubuntu1) ... Setting up libcap2:amd64 (1:2.25-2) ... Setting up libargon2-1:amd64 (0~20171227-0.2) ... Setting up libjson-c3:amd64 (0.12.1+ds-2) ... Setting up libssl1.1:amd64 (1.1.1b-1ubuntu1) ... Setting up libcryptsetup12:amd64 (2:2.1.0-1ubuntu1) ... Setting up libip4tc0:amd64 (1.8.2-3ubuntu1) ... Setting up util-linux (2.33.1-0.1ubuntu2) ... Setting up mount (2.33.1-0.1ubuntu2) ... Setting up systemd (240-6ubuntu1) ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... Setting up systemd-sysv (240-6ubuntu1) ... (Reading database ... 12730 files and directories currently installed.) Preparing to unpack .../init_1.56+nmu1_amd64.deb ... Unpacking init (1.56+nmu1) over (1.56) ... Preparing to unpack .../libattr1_1%3a2.4.48-4_amd64.deb ... Unpacking libattr1:amd64 (1:2.4.48-4) over (1:2.4.47-2build1) ... Setting up libattr1:amd64 (1:2.4.48-4) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2_amd64.deb ... Unpacking libcap-ng0:amd64 (0.7.9-2) over (0.7.9-1build1) ... Setting up libcap-ng0:amd64 (0.7.9-2) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.3.1-5ubuntu1_all.deb ... Unpacking libpam-runtime (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-runtime (1.3.1-5ubuntu1) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../00-libubsan1_9-20190227-0ubuntu1_amd64.deb ... Unpacking libubsan1:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../01-libtsan0_9-20190227-0ubuntu1_amd64.deb ... Unpacking libtsan0:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../02-libmpfr6_4.0.2-1_amd64.deb ... Unpacking libmpfr6:amd64 (4.0.2-1) over (4.0.1-2) ... Preparing to unpack .../03-g++-8_8.3.0-2ubuntu1_amd64.deb ... Unpacking g++-8 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../04-gcc-8_8.3.0-2ubuntu1_amd64.deb ... Unpacking gcc-8 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../05-cpp-8_8.3.0-2ubuntu1_amd64.deb ... Unpacking cpp-8 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../06-libcc1-0_9-20190227-0ubuntu1_amd64.deb ... Unpacking libcc1-0:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../07-binutils-x86-64-linux-gnu_2.32-4ubuntu1_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.32-4ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../08-libbinutils_2.32-4ubuntu1_amd64.deb ... Unpacking libbinutils:amd64 (2.32-4ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../09-binutils_2.32-4ubuntu1_amd64.deb ... Unpacking binutils (2.32-4ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../10-binutils-common_2.32-4ubuntu1_amd64.deb ... Unpacking binutils-common:amd64 (2.32-4ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../11-libgomp1_9-20190227-0ubuntu1_amd64.deb ... Unpacking libgomp1:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../12-libitm1_9-20190227-0ubuntu1_amd64.deb ... Unpacking libitm1:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../13-libatomic1_9-20190227-0ubuntu1_amd64.deb ... Unpacking libatomic1:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../14-libasan5_9-20190227-0ubuntu1_amd64.deb ... Unpacking libasan5:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../15-liblsan0_9-20190227-0ubuntu1_amd64.deb ... Unpacking liblsan0:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../16-libmpx2_8.3.0-2ubuntu1_amd64.deb ... Unpacking libmpx2:amd64 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../17-libquadmath0_9-20190227-0ubuntu1_amd64.deb ... Unpacking libquadmath0:amd64 (9-20190227-0ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../18-libstdc++-8-dev_8.3.0-2ubuntu1_amd64.deb ... Unpacking libstdc++-8-dev:amd64 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../19-libgcc-8-dev_8.3.0-2ubuntu1_amd64.deb ... Unpacking libgcc-8-dev:amd64 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../20-gcc-8-base_8.3.0-2ubuntu1_amd64.deb ... Unpacking gcc-8-base:amd64 (8.3.0-2ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../21-libcom-err2_1.44.5-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../22-libprocps7_2%3a3.3.15-2ubuntu2_amd64.deb ... Unpacking libprocps7:amd64 (2:3.3.15-2ubuntu2) over (2:3.3.15-2ubuntu1) ... Preparing to unpack .../23-libss2_1.44.5-1_amd64.deb ... Unpacking libss2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../24-lsb-base_10.2018112800ubuntu1_all.deb ... Unpacking lsb-base (10.2018112800ubuntu1) over (9.20170808ubuntu1) ... Preparing to unpack .../25-procps_2%3a3.3.15-2ubuntu2_amd64.deb ... Unpacking procps (2:3.3.15-2ubuntu2) over (2:3.3.15-2ubuntu1) ... Preparing to unpack .../26-openssl_1.1.1b-1ubuntu1_amd64.deb ... Unpacking openssl (1.1.1b-1ubuntu1) over (1.1.1a-1ubuntu2) ... Preparing to unpack .../27-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) over (20180409) ... Preparing to unpack .../28-readline-common_8.0-1_all.deb ... Unpacking readline-common (8.0-1) over (7.0-5) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../29-libreadline8_8.0-1_amd64.deb ... Unpacking libreadline8:amd64 (8.0-1) ... Preparing to unpack .../30-libsqlite3-0_3.27.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-1) over (3.26.0-2) ... Preparing to unpack .../31-tzdata_2018i-2_all.deb ... Unpacking tzdata (2018i-2) over (2018g-1) ... Preparing to unpack .../32-xz-utils_5.2.4-1_amd64.deb ... Unpacking xz-utils (5.2.4-1) over (5.2.2-1.3) ... Preparing to unpack .../33-libpng16-16_1.6.36-5_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.36-5) over (1.6.34-2) ... Preparing to unpack .../34-multiarch-support_2.29-0ubuntu1_amd64.deb ... Unpacking multiarch-support (2.29-0ubuntu1) over (2.28-0ubuntu1) ... Preparing to unpack .../35-g++_4%3a8.3.0-1ubuntu1_amd64.deb ... Unpacking g++ (4:8.3.0-1ubuntu1) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../36-gcc_4%3a8.3.0-1ubuntu1_amd64.deb ... Unpacking gcc (4:8.3.0-1ubuntu1) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../37-cpp_4%3a8.3.0-1ubuntu1_amd64.deb ... Unpacking cpp (4:8.3.0-1ubuntu1) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../38-dpkg-dev_1.19.5ubuntu1_all.deb ... Unpacking dpkg-dev (1.19.5ubuntu1) over (1.19.2ubuntu1) ... Preparing to unpack .../39-libdpkg-perl_1.19.5ubuntu1_all.deb ... Unpacking libdpkg-perl (1.19.5ubuntu1) over (1.19.2ubuntu1) ... Preparing to unpack .../40-build-essential_12.6ubuntu1_amd64.deb ... Unpacking build-essential (12.6ubuntu1) over (12.5ubuntu2) ... Preparing to unpack .../41-e2fslibs_1.44.5-1_amd64.deb ... Unpacking e2fslibs:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../42-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) over (2.5.1-2) ... Preparing to unpack .../43-gpg_2.2.12-1ubuntu3_amd64.deb ... Unpacking gpg (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../44-gpgconf_2.2.12-1ubuntu3_amd64.deb ... Unpacking gpgconf (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../45-gpg-agent_2.2.12-1ubuntu3_amd64.deb ... Unpacking gpg-agent (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../46-libcomerr2_1.44.5-1_amd64.deb ... Unpacking libcomerr2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../47-optipng_0.7.7-1_amd64.deb ... Unpacking optipng (0.7.7-1) over (0.7.6-1.1) ... Preparing to unpack .../48-pkgbinarymangler_144_all.deb ... Unpacking pkgbinarymangler (144) over (143) ... Setting up perl-modules-5.28 (5.28.1-4) ... Setting up lsb-base (10.2018112800ubuntu1) ... Setting up e2fslibs:amd64 (1.44.5-1) ... Setting up init (1.56+nmu1) ... Setting up libprocps7:amd64 (2:3.3.15-2ubuntu2) ... Setting up libsqlite3-0:amd64 (3.27.2-1) ... Setting up binutils-common:amd64 (2.32-4ubuntu1) ... Setting up linux-libc-dev:amd64 (4.19.0-13.14) ... Setting up libcom-err2:amd64 (1.44.5-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libgomp1:amd64 (9-20190227-0ubuntu1) ... Setting up tzdata (2018i-2) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Mar 4 19:46:50 UTC 2019. Universal Time is now: Mon Mar 4 19:46:50 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libasan5:amd64 (9-20190227-0ubuntu1) ... Setting up multiarch-support (2.29-0ubuntu1) ... Setting up libmpfr6:amd64 (4.0.2-1) ... Setting up libncurses6:amd64 (6.1+20181013-2ubuntu2) ... Setting up xz-utils (5.2.4-1) ... Setting up libquadmath0:amd64 (9-20190227-0ubuntu1) ... Setting up libpng16-16:amd64 (1.6.36-5) ... Setting up libatomic1:amd64 (9-20190227-0ubuntu1) ... Setting up libss2:amd64 (1.44.5-1) ... Setting up gcc-8-base:amd64 (8.3.0-2ubuntu1) ... Setting up libmpx2:amd64 (8.3.0-2ubuntu1) ... Setting up libubsan1:amd64 (9-20190227-0ubuntu1) ... Setting up libcomerr2:amd64 (1.44.5-1) ... Setting up procps (2:3.3.15-2ubuntu2) ... Installing new version of config file /etc/sysctl.d/10-network-security.conf ... Setting up libbinutils:amd64 (2.32-4ubuntu1) ... Setting up cpp-8 (8.3.0-2ubuntu1) ... Setting up libc-dev-bin (2.29-0ubuntu1) ... Setting up openssl (1.1.1b-1ubuntu1) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up readline-common (8.0-1) ... Setting up libcc1-0:amd64 (9-20190227-0ubuntu1) ... Setting up liblsan0:amd64 (9-20190227-0ubuntu1) ... Setting up libitm1:amd64 (9-20190227-0ubuntu1) ... Setting up libgdbm6:amd64 (1.18.1-3) ... Setting up binutils-x86-64-linux-gnu (2.32-4ubuntu1) ... Setting up libtsan0:amd64 (9-20190227-0ubuntu1) ... Setting up libreadline8:amd64 (8.0-1) ... Setting up e2fsprogs (1.44.5-1) ... Setting up binutils (2.32-4ubuntu1) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 2 added, 7 removed; done. Setting up optipng (0.7.7-1) ... Setting up libgdbm-compat4:amd64 (1.18.1-3) ... Setting up libgcc-8-dev:amd64 (8.3.0-2ubuntu1) ... Setting up libperl5.28:amd64 (5.28.1-4) ... Setting up cpp (4:8.3.0-1ubuntu1) ... Setting up gpgconf (2.2.12-1ubuntu3) ... Setting up libc6-dev:amd64 (2.29-0ubuntu1) ... Setting up gpg (2.2.12-1ubuntu3) ... Setting up libstdc++-8-dev:amd64 (8.3.0-2ubuntu1) ... Setting up gcc-8 (8.3.0-2ubuntu1) ... Setting up gpg-agent (2.2.12-1ubuntu3) ... Setting up pkgbinarymangler (144) ... Setting up gcc (4:8.3.0-1ubuntu1) ... Setting up perl (5.28.1-4) ... Setting up libdpkg-perl (1.19.5ubuntu1) ... Setting up g++-8 (8.3.0-2ubuntu1) ... Setting up dpkg-dev (1.19.5ubuntu1) ... Setting up g++ (4:8.3.0-1ubuntu1) ... Setting up build-essential (12.6ubuntu1) ... Processing triggers for systemd (240-6ubuntu1) ... Processing triggers for libc-bin (2.29-0ubuntu1) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16447221 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-16447221 --arch=amd64 --dist=disco-proposed --nolog -A python-biopython_1.73+dfsg-1ubuntu1.dsc Initiating build PACKAGEBUILD-16447221 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:45 UTC 2019 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-038.buildd +==============================================================================+ | python-biopython 1.73+dfsg-1ubuntu1 (amd64) 04 Mar 2019 19:46 | +==============================================================================+ Package: python-biopython Version: 1.73+dfsg-1ubuntu1 Source Version: 1.73+dfsg-1ubuntu1 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/python-biopython-QfoQB5/python-biopython-1.73+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/python-biopython-QfoQB5' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16447221/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-biopython_1.73+dfsg-1ubuntu1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-KmCGMv/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-KmCGMv/apt_archive ./ InRelease Get:2 copy:/<>/resolver-KmCGMv/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-KmCGMv/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-KmCGMv/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-KmCGMv/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (204 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-KmCGMv/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 12~), dh-python, python-all-dev, python3-all-dev, python-numpy, python3-numpy, flex, python-reportlab, python3-reportlab, hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, ncbi-blast+, phylip, phyml, prank, probcons, python-mysqldb, python3-mysqldb, python-matplotlib, python3-matplotlib, python-pil, python3-pil, python-rdflib (>= 4), python3-rdflib, python-renderpm, python3-renderpm, python-psycopg2, python3-psycopg2, python-scipy, python3-scipy, python-setuptools, python3-setuptools, raxml, t-coffee, wise (>= 2.4.1-16) Filtered Build-Depends: debhelper (>= 12~), dh-python, python-all-dev, python3-all-dev, python-numpy, python3-numpy, flex, python-reportlab, python3-reportlab, hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, ncbi-blast+, phylip, phyml, prank, probcons, python-mysqldb, python3-mysqldb, python-matplotlib, python3-matplotlib, python-pil, python3-pil, python-rdflib (>= 4), python3-rdflib, python-renderpm, python3-renderpm, python-psycopg2, python3-psycopg2, python-scipy, python3-scipy, python-setuptools, python3-setuptools, raxml, t-coffee, wise (>= 2.4.1-16) dpkg-deb: building package 'sbuild-build-depends-python-biopython-dummy' in '/<>/resolver-fuodEY/apt_archive/sbuild-build-depends-python-biopython-dummy.deb'. Ign:1 copy:/<>/resolver-fuodEY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-fuodEY/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-fuodEY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-fuodEY/apt_archive ./ Sources [493 B] Get:5 copy:/<>/resolver-fuodEY/apt_archive ./ Packages [789 B] Fetched 3401 B in 0s (254 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install python-biopython build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils bwa clustalo clustalw debhelper dh-autoreconf dh-python dh-strip-nondeterminism dialign dssp dwz emboss emboss-data emboss-lib fasttree file flex fontconfig-config fonts-dejavu-core fonts-lmodern fonts-lyx gettext gettext-base ghostscript groff-base gsfonts hevea intltool-debian libarchive-zip-perl libargtable2-0 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-program-options1.67.0 libboost-system1.67.0 libboost-thread1.67.0 libbrotli1 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libedit2 libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhpdf-2.3.0 libhwloc-plugins libhwloc5 libhx509-5-heimdal libibverbs1 libice6 libicu63 libijs-0.35 libimagequant0 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblmdb0 libltdl7 libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libmysqlclient20 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3 libpaper-utils libpaper1 libpciaccess0 libpipeline1 libpixman-1-0 libpmix2 libpotrace0 libpq5 libpsm-infinipath1 libpsm2-2 libptexenc1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librdmacm1 libroken18-heimdal libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 mafft man-db mime-support muscle mysql-common ncbi-blast+ ncbi-data netpbm ocaml-base-nox ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client phylip phyml po-debconf poppler-data prank preview-latex-style probcons python python-all python-all-dev python-backports.functools-lru-cache python-cycler python-dateutil python-decorator python-dev python-isodate python-kiwisolver python-matplotlib python-matplotlib-data python-matplotlib2-data python-minimal python-mysqldb python-numpy python-pil python-pkg-resources python-psycopg2 python-pyparsing python-rdflib python-renderpm python-reportlab python-reportlab-accel python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-all python3-all-dev python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-isodate python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-mysqldb python3-numpy python3-pil python3-pkg-resources python3-psycopg2 python3-pyparsing python3-rdflib python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal raxml t-coffee t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf wise wise-data x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation samtools clustalx seaview dh-make emboss-doc emboss-test embassy bison flex-doc gettext-doc libasprintf-dev libgettextpo-dev ghostscript-x groff hevea-doc cups-common libgd-tools krb5-doc krb5-user libhwloc-contrib-plugins libjs-jquery-ui-docs liblcms2-utils pciutils libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd gfortran keychain libpam-ssh monkeysphere ssh-askpass phylip-doc libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum probcons-extra python-doc python-tk python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 inkscape ipython librsvg2-common python-cairocffi python-configobj python-excelerator python-gi python-gobject-2 python-matplotlib2-doc python-nose python-qt4 python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils ttf-staypuft default-mysql-server | virtual-mysql-server python-egenix-mxdatetime python-mysqldb-dbg python-pytest python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg python-psycopg2-doc python-pyparsing-doc python-rdflib-doc python-rdflib-tools python-renderpm-dbg pdf-viewer python-egenix-mxtexttools python-reportlab-doc python-scipy-doc python-setuptools-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv ipython3 python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt4 python3-sip python3-tornado python3-mysqldb-dbg python3-pytest python3-numpy-dbg python3-pil-dbg python3-renderpm-dbg python3-egenix-mxtexttools python3.7-venv python3.7-doc boxshade t-coffee-examples perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex wise-doc Recommended packages: primer3 libfl-dev curl | wget | lynx libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback ibverbs-providers javascript-common krb5-locales libsasl2-modules libltdl-dev blast2 libwww-perl lynx ruby libopenmpi-dev xauth libmail-sendmail-perl python-tk python-olefile python-egenix-mxdatetime python-sparqlwrapper python-html5lib python3-tk python3-olefile python3-sparqlwrapper python3-html5lib amap-align dialign-tx fsa kalign libsoap-lite-perl libxml-simple-perl mustang poa proda tm-align lmodern tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils bwa clustalo clustalw debhelper dh-autoreconf dh-python dh-strip-nondeterminism dialign dssp dwz emboss emboss-data emboss-lib fasttree file flex fontconfig-config fonts-dejavu-core fonts-lmodern fonts-lyx gettext gettext-base ghostscript groff-base gsfonts hevea intltool-debian libarchive-zip-perl libargtable2-0 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-program-options1.67.0 libboost-system1.67.0 libboost-thread1.67.0 libbrotli1 libbsd0 libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libedit2 libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhpdf-2.3.0 libhwloc-plugins libhwloc5 libhx509-5-heimdal libibverbs1 libice6 libicu63 libijs-0.35 libimagequant0 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblmdb0 libltdl7 libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libmysqlclient20 libnetpbm10 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3 libpaper-utils libpaper1 libpciaccess0 libpipeline1 libpixman-1-0 libpmix2 libpotrace0 libpq5 libpsm-infinipath1 libpsm2-2 libptexenc1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librdmacm1 libroken18-heimdal libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4 mafft man-db mime-support muscle mysql-common ncbi-blast+ ncbi-data netpbm ocaml-base-nox ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client phylip phyml po-debconf poppler-data prank preview-latex-style probcons python python-all python-all-dev python-backports.functools-lru-cache python-cycler python-dateutil python-decorator python-dev python-isodate python-kiwisolver python-matplotlib python-matplotlib-data python-matplotlib2-data python-minimal python-mysqldb python-numpy python-pil python-pkg-resources python-psycopg2 python-pyparsing python-rdflib python-renderpm python-reportlab python-reportlab-accel python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-all python3-all-dev python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-isodate python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-mysqldb python3-numpy python3-pil python3-pkg-resources python3-psycopg2 python3-pyparsing python3-rdflib python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal raxml sbuild-build-depends-python-biopython-dummy t-coffee t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf wise wise-data x11-common xdg-utils 0 upgraded, 278 newly installed, 0 to remove and 0 not upgraded. Need to get 356 MB of archives. After this operation, 1454 MB of additional disk space will be used. Get:1 copy:/<>/resolver-fuodEY/apt_archive ./ sbuild-build-depends-python-biopython-dummy 0.invalid.0 [1112 B] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7-minimal amd64 3.7.2-3 [544 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1 amd64 2.2.6-1 [87.2 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3.7-minimal amd64 3.7.2-3 [1691 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 python3-minimal amd64 3.7.2-1 [23.5 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 mime-support all 3.60ubuntu1 [30.1 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 libmpdec2 amd64 2.4.2-2 [84.1 kB] Get:8 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7-stdlib amd64 3.7.2-3 [1732 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3.7 amd64 3.7.2-3 [277 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-stdlib amd64 3.7.2-1 [7024 B] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 python3 amd64 3.7.2-1 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 libbsd0 amd64 0.9.1-1 [44.6 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libxdmcp6 amd64 1:1.1.2-3 [10.7 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb1 amd64 1.13.1-2 [45.2 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-data all 2:1.6.7-1 [113 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-6 amd64 2:1.6.7-1 [572 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 groff-base amd64 1.22.4-3 [862 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libpipeline1 amd64 1.5.1-2 [25.9 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 man-db amd64 2.8.5-2 [1102 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 m4 amd64 1.4.18-2 [199 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 flex amd64 2.6.4-6.2 [317 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 poppler-data all 0.4.9-2 [1475 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-minimal amd64 2.7.16~rc1-1 [335 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7-minimal amd64 2.7.16~rc1-1 [1308 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 python2-minimal amd64 2.7.15-4 [28.0 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 python-minimal amd64 2.7.15-4 [5984 B] Get:32 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-stdlib amd64 2.7.16~rc1-1 [1910 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7 amd64 2.7.16~rc1-1 [244 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2-stdlib amd64 2.7.15-4 [7596 B] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 libpython-stdlib amd64 2.7.15-4 [5824 B] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 python2 amd64 2.7.15-4 [26.5 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 python amd64 2.7.15-4 [7832 B] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 ucf all 3.0038+nmu1 [51.6 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 tex-common all 6.11 [32.7 kB] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmagic-mgc amd64 1:5.35-4 [200 kB] Get:41 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmagic1 amd64 1:5.35-4 [74.0 kB] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 file amd64 1:5.35-4 [22.9 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 libdbus-1-3 amd64 1.12.12-1ubuntu1 [178 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 libelf1 amd64 0.176-1 [44.2 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libglib2.0-0 amd64 2.59.3-2 [1240 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libicu63 amd64 63.1-6 [8287 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 libxml2 amd64 2.9.4+dfsg1-7ubuntu3 [625 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 gettext-base amd64 0.19.8.1-9 [50.1 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libedit2 amd64 3.1-20181209-1 [85.9 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5support0 amd64 1.17-1 [33.3 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 libk5crypto3 amd64 1.17-1 [85.8 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkeyutils1 amd64 1.6-5 [10.3 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-3 amd64 1.17-1 [329 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi-krb5-2 amd64 1.17-1 [123 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 libnuma1 amd64 2.0.12-1 [20.8 kB] Get:56 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openssh-client amd64 1:7.9p1-9 [598 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 autoconf all 2.69-11 [322 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 autopoint all 0.19.8.1-9 [412 kB] Get:61 http://ftpmaster.internal/ubuntu disco/universe amd64 bwa amd64 0.7.17-2 [178 kB] Get:62 http://ftpmaster.internal/ubuntu disco/universe amd64 libargtable2-0 amd64 13-1 [13.6 kB] Get:63 http://ftpmaster.internal/ubuntu disco/universe amd64 clustalo amd64 1.2.4-2 [265 kB] Get:64 http://ftpmaster.internal/ubuntu disco/universe amd64 clustalw amd64 2.1+lgpl-6 [276 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libtool all 2.4.6-10 [194 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 1.1.1-1 [13.7 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 1.1.1-1 [5200 B] Get:70 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-3 [78.1 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-3 [81.4 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-9 [896 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 12ubuntu1 [887 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 python3-lib2to3 all 3.7.2-3ubuntu1 [75.5 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main amd64 python3-distutils all 3.7.2-3ubuntu1 [140 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 dh-python all 3.20180927ubuntu2 [90.9 kB] Get:79 http://ftpmaster.internal/ubuntu disco/universe amd64 dialign amd64 2.2.1-10 [141 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options1.67.0 amd64 1.67.0-13 [330 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system1.67.0 amd64 1.67.0-13 [205 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread1.67.0 amd64 1.67.0-13 [241 kB] Get:83 http://ftpmaster.internal/ubuntu disco/universe amd64 dssp amd64 3.0.0-3 [256 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6 amd64 2.9.1-3 [335 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:86 http://ftpmaster.internal/ubuntu disco/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main amd64 libfontconfig1 amd64 2.13.1-2ubuntu2 [114 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8 amd64 2.0.1-0ubuntu2 [117 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:91 http://ftpmaster.internal/ubuntu disco/main amd64 libjbig0 amd64 2.1-3.1build1 [26.7 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 libwebp6 amd64 0.6.1-2 [185 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main amd64 libtiff5 amd64 4.0.10-4 [156 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main amd64 libxpm4 amd64 1:3.5.12-1 [34.0 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main amd64 libgd3 amd64 2.2.5-5.1 [118 kB] Get:96 http://ftpmaster.internal/ubuntu disco/universe amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1 [336 kB] Get:97 http://ftpmaster.internal/ubuntu disco/main amd64 mysql-common all 5.8+1.0.5 [7352 B] Get:98 http://ftpmaster.internal/ubuntu disco/main amd64 libmysqlclient20 amd64 5.7.25-1 [809 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-2.1 [41.4 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-2.1 [182 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-2.1 [29.4 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-2.1 [86.7 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-2.1 [47.8 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-2.1 [107 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-2.1 [206 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-2.1 [14.8 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-2.1 [96.4 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [14.9 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [49.4 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-common all 2.4.47+dfsg-3ubuntu1 [16.5 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3ubuntu1 [155 kB] Get:112 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpq5 amd64 11.2-1 [105 kB] Get:113 http://ftpmaster.internal/ubuntu disco/universe amd64 emboss-lib amd64 6.6.0+dfsg-7 [2692 kB] Get:114 http://ftpmaster.internal/ubuntu disco/universe amd64 emboss-data all 6.6.0+dfsg-7 [61.0 MB] Get:115 http://ftpmaster.internal/ubuntu disco/universe amd64 emboss amd64 6.6.0+dfsg-7 [997 kB] Get:116 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-lmodern all 2.004.5-6 [4532 kB] Get:117 http://ftpmaster.internal/ubuntu disco/universe amd64 fonts-lyx all 2.3.2-1 [154 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-common-data amd64 0.7-4ubuntu5 [21.4 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-common3 amd64 0.7-4ubuntu5 [21.6 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-client3 amd64 0.7-4ubuntu5 [25.4 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main amd64 libcups2 amd64 2.2.10-4 [211 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 libcupsimage2 amd64 2.2.10-4 [18.4 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main amd64 libijs-0.35 amd64 0.35-13 [15.5 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 libjbig2dec0 amd64 0.15-2 [58.5 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 libpaper1 amd64 1.1.26 [12.9 kB] Get:126 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgs9-common all 9.26~dfsg+0-0ubuntu6 [5092 kB] Get:127 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgs9 amd64 9.26~dfsg+0-0ubuntu6 [2393 kB] Get:128 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 ghostscript amd64 9.26~dfsg+0-0ubuntu6 [51.5 kB] Get:129 http://ftpmaster.internal/ubuntu disco/main amd64 gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.4 [3120 kB] Get:130 http://ftpmaster.internal/ubuntu disco/universe amd64 libnetpbm10 amd64 2:10.0-15.3build1 [58.0 kB] Get:131 http://ftpmaster.internal/ubuntu disco/universe amd64 netpbm amd64 2:10.0-15.3build1 [1017 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 libpaper-utils amd64 1.1.26 [8320 B] Get:133 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkpathsea6 amd64 2018.20181218.49446-2 [55.8 kB] Get:134 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libptexenc1 amd64 2018.20181218.49446-2 [35.2 kB] Get:135 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsynctex2 amd64 2018.20181218.49446-2 [53.9 kB] Get:136 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtexlua52 amd64 2018.20181218.49446-2 [89.9 kB] Get:137 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtexlua53 amd64 2018.20181218.49446-2 [103 kB] Get:138 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtexluajit2 amd64 2018.20181218.49446-2 [234 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 t1utils amd64 1.41-3 [56.1 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 libbrotli1 amd64 1.0.7-2 [268 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 libpixman-1-0 amd64 0.36.0-1 [229 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render0 amd64 1.13.1-2 [14.8 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shm0 amd64 1.13.1-2 [5548 B] Get:144 http://ftpmaster.internal/ubuntu disco/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB] Get:145 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcairo2 amd64 1.16.0-3 [583 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main amd64 libgraphite2-3 amd64 1.3.13-7 [73.2 kB] Get:147 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz0b amd64 2.3.1-1 [360 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz-icu0 amd64 2.3.1-1 [5472 B] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 libpotrace0 amd64 1.15-1 [17.5 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 libteckit0 amd64 2.5.8+ds2-5ubuntu1 [317 kB] Get:151 http://ftpmaster.internal/ubuntu disco/main amd64 libwoff1 amd64 1.0.2-1build1 [42.1 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main amd64 x11-common all 1:7.7+19ubuntu9 [22.4 kB] Get:153 http://ftpmaster.internal/ubuntu disco/main amd64 libice6 amd64 2:1.0.9-2 [40.2 kB] Get:154 http://ftpmaster.internal/ubuntu disco/main amd64 libsm6 amd64 2:1.2.3-1 [16.1 kB] Get:155 http://ftpmaster.internal/ubuntu disco/main amd64 libxt6 amd64 1:1.1.5-1 [160 kB] Get:156 http://ftpmaster.internal/ubuntu disco/main amd64 libxmu6 amd64 2:1.1.2-2 [46.0 kB] Get:157 http://ftpmaster.internal/ubuntu disco/main amd64 libxaw7 amd64 2:1.0.13-1 [173 kB] Get:158 http://ftpmaster.internal/ubuntu disco/main amd64 libxi6 amd64 2:1.7.9-1 [29.2 kB] Get:159 http://ftpmaster.internal/ubuntu disco/main amd64 libxxhash0 amd64 0.6.5-2 [7180 B] Get:160 http://ftpmaster.internal/ubuntu disco/main amd64 libzzip-0-13 amd64 0.13.62-3.1ubuntu1 [26.0 kB] Get:161 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 texlive-binaries amd64 2018.20181218.49446-2 [11.5 MB] Get:162 http://ftpmaster.internal/ubuntu disco/main amd64 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB] Get:163 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-base all 2018.20190227-1 [19.8 MB] Get:164 http://ftpmaster.internal/ubuntu disco/universe amd64 ocaml-base-nox amd64 4.05.0-10ubuntu2 [544 kB] Get:165 http://ftpmaster.internal/ubuntu disco/universe amd64 hevea all 2.32-2 [884 kB] Get:166 http://ftpmaster.internal/ubuntu disco/main amd64 libblas3 amd64 3.8.0-2 [138 kB] Get:167 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4build1 [133 kB] Get:168 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4build1 [85.9 kB] Get:169 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4build1 [5228 B] Get:170 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1-dev amd64 2.2.6-1 [134 kB] Get:171 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-3-200 amd64 3.4.0-1 [53.9 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] Get:173 http://ftpmaster.internal/ubuntu disco/main amd64 libibverbs1 amd64 22.1-1 [50.3 kB] Get:174 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:175 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm2-2 amd64 11.2.78-1 [177 kB] Get:176 http://ftpmaster.internal/ubuntu disco/main amd64 librdmacm1 amd64 22.1-1 [63.4 kB] Get:177 http://ftpmaster.internal/ubuntu disco/universe amd64 libfabric1 amd64 1.6.2-3 [396 kB] Get:178 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgfortran5 amd64 9-20190227-0ubuntu1 [641 kB] Get:179 http://ftpmaster.internal/ubuntu disco/universe amd64 libimagequant0 amd64 2.12.2-1 [31.3 kB] Get:180 http://ftpmaster.internal/ubuntu disco/main amd64 libjs-jquery all 3.3.1~dfsg-1 [329 kB] Get:181 http://ftpmaster.internal/ubuntu disco/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:182 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack3 amd64 3.8.0-2 [2099 kB] Get:183 http://ftpmaster.internal/ubuntu disco/main amd64 liblcms2-2 amd64 2.9-3 [139 kB] Get:184 http://ftpmaster.internal/ubuntu disco/universe amd64 liblmdb0 amd64 0.9.23-0ubuntu1 [44.4 kB] Get:185 http://ftpmaster.internal/ubuntu disco/main amd64 libltdl7 amd64 2.4.6-10 [38.3 kB] Get:186 http://ftpmaster.internal/ubuntu disco/universe amd64 libmbedcrypto3 amd64 2.16.0-1 [150 kB] Get:187 http://ftpmaster.internal/ubuntu disco/universe amd64 libmbedx509-0 amd64 2.16.0-1 [33.5 kB] Get:188 http://ftpmaster.internal/ubuntu disco/universe amd64 libmbedtls12 amd64 2.16.0-1 [71.7 kB] Get:189 http://ftpmaster.internal/ubuntu disco/universe amd64 libhwloc5 amd64 1.11.12-3 [107 kB] Get:190 http://ftpmaster.internal/ubuntu disco/main amd64 libpciaccess0 amd64 0.14-1 [17.9 kB] Get:191 http://ftpmaster.internal/ubuntu disco/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] Get:192 http://ftpmaster.internal/ubuntu disco/universe amd64 libhwloc-plugins amd64 1.11.12-3 [12.9 kB] Get:193 http://ftpmaster.internal/ubuntu disco/universe amd64 libpmix2 amd64 3.1.2-2 [496 kB] Get:194 http://ftpmaster.internal/ubuntu disco/universe amd64 libopenmpi3 amd64 3.1.3-10 [2571 kB] Get:195 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7 amd64 2.7.16~rc1-1 [1036 kB] Get:196 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-dev amd64 2.7.16~rc1-1 [31.6 MB] Get:197 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2-dev amd64 2.7.15-4 [7648 B] Get:198 http://ftpmaster.internal/ubuntu disco/main amd64 libpython-dev amd64 2.7.15-4 [5884 B] Get:199 http://ftpmaster.internal/ubuntu disco/main amd64 libpython-all-dev amd64 2.7.15-4 [1104 B] Get:200 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7 amd64 3.7.2-3 [1498 kB] Get:201 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7-dev amd64 3.7.2-3 [48.4 MB] Get:202 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-dev amd64 3.7.2-1 [7120 B] Get:203 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-all-dev amd64 3.7.2-1 [1108 B] Get:204 http://ftpmaster.internal/ubuntu disco/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] Get:205 http://ftpmaster.internal/ubuntu disco/main amd64 libwebpmux3 amd64 0.6.1-2 [19.6 kB] Get:206 http://ftpmaster.internal/ubuntu disco/universe amd64 mafft amd64 7.407-2 [1016 kB] Get:207 http://ftpmaster.internal/ubuntu disco/universe amd64 muscle amd64 1:3.8.1551-1 [248 kB] Get:208 http://ftpmaster.internal/ubuntu disco/universe amd64 ncbi-data all 6.1.20170106-6 [3659 kB] Get:209 http://ftpmaster.internal/ubuntu disco/universe amd64 ncbi-blast+ amd64 2.8.1-1 [10.7 MB] Get:210 http://ftpmaster.internal/ubuntu disco/universe amd64 openmpi-common all 3.1.3-10 [147 kB] Get:211 http://ftpmaster.internal/ubuntu disco/universe amd64 openmpi-bin amd64 3.1.3-10 [87.8 kB] Get:212 http://ftpmaster.internal/ubuntu disco/universe amd64 phylip amd64 1:3.697+dfsg-1 [942 kB] Get:213 http://ftpmaster.internal/ubuntu disco/universe amd64 phyml amd64 3:3.3.20180621-2ubuntu1 [1644 kB] Get:214 http://ftpmaster.internal/ubuntu disco/universe amd64 prank amd64 0.0.170427+dfsg-2 [379 kB] Get:215 http://ftpmaster.internal/ubuntu disco/main amd64 preview-latex-style all 11.91-1ubuntu1 [185 kB] Get:216 http://ftpmaster.internal/ubuntu disco/universe amd64 probcons amd64 1.12-12 [117 kB] Get:217 http://ftpmaster.internal/ubuntu disco/universe amd64 python-all amd64 2.7.15-4 [1088 B] Get:218 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7-dev amd64 2.7.16~rc1-1 [279 kB] Get:219 http://ftpmaster.internal/ubuntu disco/main amd64 python2-dev amd64 2.7.15-4 [1256 B] Get:220 http://ftpmaster.internal/ubuntu disco/main amd64 python-dev amd64 2.7.15-4 [1228 B] Get:221 http://ftpmaster.internal/ubuntu disco/universe amd64 python-all-dev amd64 2.7.15-4 [1112 B] Get:222 http://ftpmaster.internal/ubuntu disco/universe amd64 python-backports.functools-lru-cache all 1.5-2 [6372 B] Get:223 http://ftpmaster.internal/ubuntu disco/main amd64 python-six all 1.12.0-1 [11.6 kB] Get:224 http://ftpmaster.internal/ubuntu disco/universe amd64 python-cycler all 0.10.0-1 [7520 B] Get:225 http://ftpmaster.internal/ubuntu disco/main amd64 python-dateutil all 2.7.3-3 [75.5 kB] Get:226 http://ftpmaster.internal/ubuntu disco/universe amd64 python-decorator all 4.3.0-1.1 [9524 B] Get:227 http://ftpmaster.internal/ubuntu disco/universe amd64 python-isodate all 0.6.0-1 [23.8 kB] Get:228 http://ftpmaster.internal/ubuntu disco/main amd64 python-pkg-resources all 40.8.0-1 [129 kB] Get:229 http://ftpmaster.internal/ubuntu disco/universe amd64 python-kiwisolver amd64 1.0.1-2build2 [61.9 kB] Get:230 http://ftpmaster.internal/ubuntu disco/universe amd64 python-matplotlib2-data all 2.2.3-6 [3774 kB] Get:231 http://ftpmaster.internal/ubuntu disco/main amd64 python-pyparsing all 2.2.0+dfsg1-2 [52.1 kB] Get:232 http://ftpmaster.internal/ubuntu disco/main amd64 python-tz all 2018.9-1 [31.1 kB] Get:233 http://ftpmaster.internal/ubuntu disco/universe amd64 python-numpy amd64 1:1.16.1-1ubuntu1 [2085 kB] Get:234 http://ftpmaster.internal/ubuntu disco/universe amd64 python-subprocess32 amd64 3.5.3-1 [26.8 kB] Get:235 http://ftpmaster.internal/ubuntu disco/universe amd64 python-matplotlib amd64 2.2.3-6 [4229 kB] Get:236 http://ftpmaster.internal/ubuntu disco/universe amd64 python-matplotlib-data all 3.0.2-2 [3776 kB] Get:237 http://ftpmaster.internal/ubuntu disco/universe amd64 python-mysqldb amd64 1.3.10-2 [49.1 kB] Get:238 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python-pil amd64 5.4.1-1 [338 kB] Get:239 http://ftpmaster.internal/ubuntu disco/universe amd64 python-psycopg2 amd64 2.7.7-1 [156 kB] Get:240 http://ftpmaster.internal/ubuntu disco/universe amd64 python-rdflib all 4.2.2-2 [241 kB] Get:241 http://ftpmaster.internal/ubuntu disco/universe amd64 python-renderpm amd64 3.5.13-1 [59.4 kB] Get:242 http://ftpmaster.internal/ubuntu disco/universe amd64 python-reportlab-accel amd64 3.5.13-1 [22.7 kB] Get:243 http://ftpmaster.internal/ubuntu disco/universe amd64 python-reportlab all 3.5.13-1 [527 kB] Get:244 http://ftpmaster.internal/ubuntu disco/main amd64 python-setuptools all 40.8.0-1 [329 kB] Get:245 http://ftpmaster.internal/ubuntu disco/main amd64 python3-all amd64 3.7.2-1 [1104 B] Get:246 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3.7-dev amd64 3.7.2-3 [511 kB] Get:247 http://ftpmaster.internal/ubuntu disco/main amd64 python3-dev amd64 3.7.2-1 [1304 B] Get:248 http://ftpmaster.internal/ubuntu disco/main amd64 python3-all-dev amd64 3.7.2-1 [1108 B] Get:249 http://ftpmaster.internal/ubuntu disco/main amd64 python3-six all 1.12.0-1 [11.7 kB] Get:250 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-cycler all 0.10.0-1 [7622 B] Get:251 http://ftpmaster.internal/ubuntu disco/main amd64 python3-dateutil all 2.7.3-3 [63.3 kB] Get:252 http://ftpmaster.internal/ubuntu disco/main amd64 python3-decorator all 4.3.0-1.1 [9600 B] Get:253 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-isodate all 0.6.0-1 [23.9 kB] Get:254 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pkg-resources all 40.8.0-1 [100 kB] Get:255 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-kiwisolver amd64 1.0.1-2build2 [60.8 kB] Get:256 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pyparsing all 2.2.0+dfsg1-2 [52.2 kB] Get:257 http://ftpmaster.internal/ubuntu disco/main amd64 python3-numpy amd64 1:1.16.1-1ubuntu1 [2106 kB] Get:258 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-matplotlib amd64 3.0.2-2 [4487 kB] Get:259 http://ftpmaster.internal/ubuntu disco/main amd64 python3-mysqldb amd64 1.3.10-2 [46.0 kB] Get:260 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-pil amd64 5.4.1-1 [338 kB] Get:261 http://ftpmaster.internal/ubuntu disco/main amd64 python3-psycopg2 amd64 2.7.7-1 [153 kB] Get:262 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-rdflib all 4.2.2-2 [239 kB] Get:263 http://ftpmaster.internal/ubuntu disco/main amd64 python3-renderpm amd64 3.5.13-1 [59.8 kB] Get:264 http://ftpmaster.internal/ubuntu disco/main amd64 python3-reportlab-accel amd64 3.5.13-1 [18.2 kB] Get:265 http://ftpmaster.internal/ubuntu disco/main amd64 python3-reportlab all 3.5.13-1 [524 kB] Get:266 http://ftpmaster.internal/ubuntu disco/main amd64 python3-setuptools all 40.8.0-1 [252 kB] Get:267 http://ftpmaster.internal/ubuntu disco/universe amd64 raxml amd64 8.2.12+dfsg-1 [1273 kB] Get:268 http://ftpmaster.internal/ubuntu disco/universe amd64 t-coffee amd64 12.00.7fb08c2-4 [1520 kB] Get:269 http://ftpmaster.internal/ubuntu disco/universe amd64 texlive-fonts-recommended all 2018.20190227-1 [5199 kB] Get:270 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-latex-base all 2018.20190227-1 [954 kB] Get:271 http://ftpmaster.internal/ubuntu disco/main amd64 texlive-latex-recommended all 2018.20190227-1 [15.2 MB] Get:272 http://ftpmaster.internal/ubuntu disco/universe amd64 texlive-pictures all 2018.20190227-1 [8107 kB] Get:273 http://ftpmaster.internal/ubuntu disco/universe amd64 texlive-latex-extra all 2018.20190227-1 [11.9 MB] Get:274 http://ftpmaster.internal/ubuntu disco/universe amd64 wise-data all 2.4.1-21 [107 kB] Get:275 http://ftpmaster.internal/ubuntu disco/universe amd64 wise amd64 2.4.1-21 [988 kB] Get:276 http://ftpmaster.internal/ubuntu disco/universe amd64 fasttree amd64 2.1.10-2 [171 kB] Get:277 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-scipy amd64 1.2.1-0ubuntu1 [10.6 MB] Get:278 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-scipy amd64 1.2.1-0ubuntu1 [10.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 356 MB in 15s (24.4 MB/s) Selecting previously unselected package libpython3.7-minimal:amd64. (Reading database ... 12777 files and directories currently installed.) Preparing to unpack .../libpython3.7-minimal_3.7.2-3_amd64.deb ... Unpacking libpython3.7-minimal:amd64 (3.7.2-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.2.6-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.2-3_amd64.deb ... Unpacking python3.7-minimal (3.7.2-3) ... Setting up libpython3.7-minimal:amd64 (3.7.2-3) ... Setting up libexpat1:amd64 (2.2.6-1) ... Setting up python3.7-minimal (3.7.2-3) ... Selecting previously unselected package python3-minimal. (Reading database ... 13026 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.2-1_amd64.deb ... Unpacking python3-minimal (3.7.2-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.60ubuntu1_all.deb ... Unpacking mime-support (3.60ubuntu1) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-2_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-2) ... Selecting previously unselected package libpython3.7-stdlib:amd64. Preparing to unpack .../3-libpython3.7-stdlib_3.7.2-3_amd64.deb ... Unpacking libpython3.7-stdlib:amd64 (3.7.2-3) ... Selecting previously unselected package python3.7. Preparing to unpack .../4-python3.7_3.7.2-3_amd64.deb ... Unpacking python3.7 (3.7.2-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../5-libpython3-stdlib_3.7.2-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.7.2-1) ... Setting up python3-minimal (3.7.2-1) ... Selecting previously unselected package python3. (Reading database ... 13463 files and directories currently installed.) Preparing to unpack .../00-python3_3.7.2-1_amd64.deb ... Unpacking python3 (3.7.2-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../01-libxau6_1%3a1.0.8-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../02-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../03-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../04-libxcb1_1.13.1-2_amd64.deb ... Unpacking libxcb1:amd64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../05-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../06-libx11-6_2%3a1.6.7-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.7-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../07-libxext6_2%3a1.3.3-1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../08-bsdmainutils_11.1.2ubuntu2_amd64.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../09-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../10-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../11-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../13-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package flex. Preparing to unpack .../15-flex_2.6.4-6.2_amd64.deb ... Unpacking flex (2.6.4-6.2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../16-poppler-data_0.4.9-2_all.deb ... Unpacking poppler-data (0.4.9-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../17-libpython2.7-minimal_2.7.16~rc1-1_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.16~rc1-1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../18-python2.7-minimal_2.7.16~rc1-1_amd64.deb ... Unpacking python2.7-minimal (2.7.16~rc1-1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../19-python2-minimal_2.7.15-4_amd64.deb ... Unpacking python2-minimal (2.7.15-4) ... Selecting previously unselected package python-minimal. Preparing to unpack .../20-python-minimal_2.7.15-4_amd64.deb ... Unpacking python-minimal (2.7.15-4) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../21-libpython2.7-stdlib_2.7.16~rc1-1_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.16~rc1-1) ... Selecting previously unselected package python2.7. Preparing to unpack .../22-python2.7_2.7.16~rc1-1_amd64.deb ... Unpacking python2.7 (2.7.16~rc1-1) ... Selecting previously unselected package libpython2-stdlib:amd64. Preparing to unpack .../23-libpython2-stdlib_2.7.15-4_amd64.deb ... Unpacking libpython2-stdlib:amd64 (2.7.15-4) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../24-libpython-stdlib_2.7.15-4_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.15-4) ... Setting up libpython2.7-minimal:amd64 (2.7.16~rc1-1) ... Setting up python2.7-minimal (2.7.16~rc1-1) ... Setting up python2-minimal (2.7.15-4) ... Selecting previously unselected package python2. (Reading database ... 15767 files and directories currently installed.) Preparing to unpack .../python2_2.7.15-4_amd64.deb ... Unpacking python2 (2.7.15-4) ... Setting up python-minimal (2.7.15-4) ... Selecting previously unselected package python. (Reading database ... 15799 files and directories currently installed.) Preparing to unpack .../000-python_2.7.15-4_amd64.deb ... Unpacking python (2.7.15-4) ... Selecting previously unselected package ucf. Preparing to unpack .../001-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../002-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../003-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../004-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../005-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../006-libdbus-1-3_1.12.12-1ubuntu1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.12.12-1ubuntu1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../007-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../008-libglib2.0-0_2.59.3-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.59.3-2) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../009-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../010-libxml2_2.9.4+dfsg1-7ubuntu3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7ubuntu3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../011-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../012-libedit2_3.1-20181209-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20181209-1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../013-libkrb5support0_1.17-1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../014-libk5crypto3_1.17-1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../015-libkeyutils1_1.6-5_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-5) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../016-libkrb5-3_1.17-1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../017-libgssapi-krb5-2_1.17-1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-1) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../018-libnuma1_2.0.12-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.12-1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../019-openssh-client_1%3a7.9p1-9_amd64.deb ... Unpacking openssh-client (1:7.9p1-9) ... Selecting previously unselected package autoconf. Preparing to unpack .../020-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../021-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../022-automake_1%3a1.16.1-4ubuntu3_all.deb ... Unpacking automake (1:1.16.1-4ubuntu3) ... Selecting previously unselected package autopoint. Preparing to unpack .../023-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package bwa. Preparing to unpack .../024-bwa_0.7.17-2_amd64.deb ... Unpacking bwa (0.7.17-2) ... Selecting previously unselected package libargtable2-0. Preparing to unpack .../025-libargtable2-0_13-1_amd64.deb ... Unpacking libargtable2-0 (13-1) ... Selecting previously unselected package clustalo. Preparing to unpack .../026-clustalo_1.2.4-2_amd64.deb ... Unpacking clustalo (1.2.4-2) ... Selecting previously unselected package clustalw. Preparing to unpack .../027-clustalw_2.1+lgpl-6_amd64.deb ... Unpacking clustalw (2.1+lgpl-6) ... Selecting previously unselected package libtool. Preparing to unpack .../028-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../029-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../030-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../031-libfile-stripnondeterminism-perl_1.1.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../032-dh-strip-nondeterminism_1.1.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.1-1) ... Selecting previously unselected package dwz. Preparing to unpack .../033-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../034-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../035-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../036-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../037-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../038-debhelper_12ubuntu1_all.deb ... Unpacking debhelper (12ubuntu1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../039-python3-lib2to3_3.7.2-3ubuntu1_all.deb ... Unpacking python3-lib2to3 (3.7.2-3ubuntu1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../040-python3-distutils_3.7.2-3ubuntu1_all.deb ... Unpacking python3-distutils (3.7.2-3ubuntu1) ... Selecting previously unselected package dh-python. Preparing to unpack .../041-dh-python_3.20180927ubuntu2_all.deb ... Unpacking dh-python (3.20180927ubuntu2) ... Selecting previously unselected package dialign. Preparing to unpack .../042-dialign_2.2.1-10_amd64.deb ... Unpacking dialign (2.2.1-10) ... Selecting previously unselected package libboost-program-options1.67.0:amd64. Preparing to unpack .../043-libboost-program-options1.67.0_1.67.0-13_amd64.deb ... Unpacking libboost-program-options1.67.0:amd64 (1.67.0-13) ... Selecting previously unselected package libboost-system1.67.0:amd64. Preparing to unpack .../044-libboost-system1.67.0_1.67.0-13_amd64.deb ... Unpacking libboost-system1.67.0:amd64 (1.67.0-13) ... Selecting previously unselected package libboost-thread1.67.0:amd64. Preparing to unpack .../045-libboost-thread1.67.0_1.67.0-13_amd64.deb ... Unpacking libboost-thread1.67.0:amd64 (1.67.0-13) ... Selecting previously unselected package dssp. Preparing to unpack .../046-dssp_3.0.0-3_amd64.deb ... Unpacking dssp (3.0.0-3) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../047-libfreetype6_2.9.1-3_amd64.deb ... Unpacking libfreetype6:amd64 (2.9.1-3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../048-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package ttf-bitstream-vera. Preparing to unpack .../049-ttf-bitstream-vera_1.10-8_all.deb ... Unpacking ttf-bitstream-vera (1.10-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../050-fontconfig-config_2.13.1-2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../051-libfontconfig1_2.13.1-2ubuntu2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-2ubuntu2) ... Selecting previously unselected package libjpeg-turbo8:amd64. Preparing to unpack .../052-libjpeg-turbo8_2.0.1-0ubuntu2_amd64.deb ... Unpacking libjpeg-turbo8:amd64 (2.0.1-0ubuntu2) ... Selecting previously unselected package libjpeg8:amd64. Preparing to unpack .../053-libjpeg8_8c-2ubuntu8_amd64.deb ... Unpacking libjpeg8:amd64 (8c-2ubuntu8) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../054-libjbig0_2.1-3.1build1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1build1) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../055-libwebp6_0.6.1-2_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../056-libtiff5_4.0.10-4_amd64.deb ... Unpacking libtiff5:amd64 (4.0.10-4) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../057-libxpm4_1%3a3.5.12-1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../058-libgd3_2.2.5-5.1_amd64.deb ... Unpacking libgd3:amd64 (2.2.5-5.1) ... Selecting previously unselected package libhpdf-2.3.0:amd64. Preparing to unpack .../059-libhpdf-2.3.0_2.3.0+dfsg-1_amd64.deb ... Unpacking libhpdf-2.3.0:amd64 (2.3.0+dfsg-1) ... Selecting previously unselected package mysql-common. Preparing to unpack .../060-mysql-common_5.8+1.0.5_all.deb ... Unpacking mysql-common (5.8+1.0.5) ... Selecting previously unselected package libmysqlclient20:amd64. Preparing to unpack .../061-libmysqlclient20_5.7.25-1_amd64.deb ... Unpacking libmysqlclient20:amd64 (5.7.25-1) ... Selecting previously unselected package libroken18-heimdal:amd64. Preparing to unpack .../062-libroken18-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libroken18-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libasn1-8-heimdal:amd64. Preparing to unpack .../063-libasn1-8-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libasn1-8-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libheimbase1-heimdal:amd64. Preparing to unpack .../064-libheimbase1-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libheimbase1-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libhcrypto4-heimdal:amd64. Preparing to unpack .../065-libhcrypto4-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libhcrypto4-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libwind0-heimdal:amd64. Preparing to unpack .../066-libwind0-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libwind0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libhx509-5-heimdal:amd64. Preparing to unpack .../067-libhx509-5-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libhx509-5-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libkrb5-26-heimdal:amd64. Preparing to unpack .../068-libkrb5-26-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libheimntlm0-heimdal:amd64. Preparing to unpack .../069-libheimntlm0-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libgssapi3-heimdal:amd64. Preparing to unpack .../070-libgssapi3-heimdal_7.5.0+dfsg-2.1_amd64.deb ... Unpacking libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../071-libsasl2-modules-db_2.1.27+dfsg-1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../072-libsasl2-2_2.1.27+dfsg-1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../073-libldap-common_2.4.47+dfsg-3ubuntu1_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3ubuntu1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../074-libldap-2.4-2_2.4.47+dfsg-3ubuntu1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.47+dfsg-3ubuntu1) ... Selecting previously unselected package libpq5:amd64. Preparing to unpack .../075-libpq5_11.2-1_amd64.deb ... Unpacking libpq5:amd64 (11.2-1) ... Selecting previously unselected package emboss-lib. Preparing to unpack .../076-emboss-lib_6.6.0+dfsg-7_amd64.deb ... Unpacking emboss-lib (6.6.0+dfsg-7) ... Selecting previously unselected package emboss-data. Preparing to unpack .../077-emboss-data_6.6.0+dfsg-7_all.deb ... Unpacking emboss-data (6.6.0+dfsg-7) ... Selecting previously unselected package emboss. Preparing to unpack .../078-emboss_6.6.0+dfsg-7_amd64.deb ... Unpacking emboss (6.6.0+dfsg-7) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../079-fonts-lmodern_2.004.5-6_all.deb ... Unpacking fonts-lmodern (2.004.5-6) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../080-fonts-lyx_2.3.2-1_all.deb ... Unpacking fonts-lyx (2.3.2-1) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../081-libavahi-common-data_0.7-4ubuntu5_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../082-libavahi-common3_0.7-4ubuntu5_amd64.deb ... Unpacking libavahi-common3:amd64 (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../083-libavahi-client3_0.7-4ubuntu5_amd64.deb ... Unpacking libavahi-client3:amd64 (0.7-4ubuntu5) ... Selecting previously unselected package libcups2:amd64. Preparing to unpack .../084-libcups2_2.2.10-4_amd64.deb ... Unpacking libcups2:amd64 (2.2.10-4) ... Selecting previously unselected package libcupsimage2:amd64. Preparing to unpack .../085-libcupsimage2_2.2.10-4_amd64.deb ... Unpacking libcupsimage2:amd64 (2.2.10-4) ... Selecting previously unselected package libijs-0.35:amd64. Preparing to unpack .../086-libijs-0.35_0.35-13_amd64.deb ... Unpacking libijs-0.35:amd64 (0.35-13) ... Selecting previously unselected package libjbig2dec0:amd64. Preparing to unpack .../087-libjbig2dec0_0.15-2_amd64.deb ... Unpacking libjbig2dec0:amd64 (0.15-2) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../088-libpaper1_1.1.26_amd64.deb ... Unpacking libpaper1:amd64 (1.1.26) ... Selecting previously unselected package libgs9-common. Preparing to unpack .../089-libgs9-common_9.26~dfsg+0-0ubuntu6_all.deb ... Unpacking libgs9-common (9.26~dfsg+0-0ubuntu6) ... Selecting previously unselected package libgs9:amd64. Preparing to unpack .../090-libgs9_9.26~dfsg+0-0ubuntu6_amd64.deb ... Unpacking libgs9:amd64 (9.26~dfsg+0-0ubuntu6) ... Selecting previously unselected package ghostscript. Preparing to unpack .../091-ghostscript_9.26~dfsg+0-0ubuntu6_amd64.deb ... Unpacking ghostscript (9.26~dfsg+0-0ubuntu6) ... Selecting previously unselected package gsfonts. Preparing to unpack .../092-gsfonts_1%3a8.11+urwcyr1.0.7~pre44-4.4_all.deb ... Unpacking gsfonts (1:8.11+urwcyr1.0.7~pre44-4.4) ... Selecting previously unselected package libnetpbm10. Preparing to unpack .../093-libnetpbm10_2%3a10.0-15.3build1_amd64.deb ... Unpacking libnetpbm10 (2:10.0-15.3build1) ... Selecting previously unselected package netpbm. Preparing to unpack .../094-netpbm_2%3a10.0-15.3build1_amd64.deb ... Unpacking netpbm (2:10.0-15.3build1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../095-libpaper-utils_1.1.26_amd64.deb ... Unpacking libpaper-utils (1.1.26) ... Selecting previously unselected package libkpathsea6:amd64. Preparing to unpack .../096-libkpathsea6_2018.20181218.49446-2_amd64.deb ... Unpacking libkpathsea6:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package libptexenc1:amd64. Preparing to unpack .../097-libptexenc1_2018.20181218.49446-2_amd64.deb ... Unpacking libptexenc1:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package libsynctex2:amd64. Preparing to unpack .../098-libsynctex2_2018.20181218.49446-2_amd64.deb ... Unpacking libsynctex2:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package libtexlua52:amd64. Preparing to unpack .../099-libtexlua52_2018.20181218.49446-2_amd64.deb ... Unpacking libtexlua52:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package libtexlua53:amd64. Preparing to unpack .../100-libtexlua53_2018.20181218.49446-2_amd64.deb ... Unpacking libtexlua53:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package libtexluajit2:amd64. Preparing to unpack .../101-libtexluajit2_2018.20181218.49446-2_amd64.deb ... Unpacking libtexluajit2:amd64 (2018.20181218.49446-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../102-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../103-libbrotli1_1.0.7-2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.7-2) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../104-libpixman-1-0_0.36.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.36.0-1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../105-libxcb-render0_1.13.1-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../106-libxcb-shm0_1.13.1-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.13.1-2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../107-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../108-libcairo2_1.16.0-3_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-3) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../109-libgraphite2-3_1.3.13-7_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.13-7) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../110-libharfbuzz0b_2.3.1-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.3.1-1) ... Selecting previously unselected package libharfbuzz-icu0:amd64. Preparing to unpack .../111-libharfbuzz-icu0_2.3.1-1_amd64.deb ... Unpacking libharfbuzz-icu0:amd64 (2.3.1-1) ... Selecting previously unselected package libpotrace0:amd64. Preparing to unpack .../112-libpotrace0_1.15-1_amd64.deb ... Unpacking libpotrace0:amd64 (1.15-1) ... Selecting previously unselected package libteckit0:amd64. Preparing to unpack .../113-libteckit0_2.5.8+ds2-5ubuntu1_amd64.deb ... Unpacking libteckit0:amd64 (2.5.8+ds2-5ubuntu1) ... Selecting previously unselected package libwoff1:amd64. Preparing to unpack .../114-libwoff1_1.0.2-1build1_amd64.deb ... Unpacking libwoff1:amd64 (1.0.2-1build1) ... Selecting previously unselected package x11-common. Preparing to unpack .../115-x11-common_1%3a7.7+19ubuntu9_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu9) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../116-libice6_2%3a1.0.9-2_amd64.deb ... Unpacking libice6:amd64 (2:1.0.9-2) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../117-libsm6_2%3a1.2.3-1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1) ... Selecting previously unselected package libxt6:amd64. Preparing to unpack .../118-libxt6_1%3a1.1.5-1_amd64.deb ... Unpacking libxt6:amd64 (1:1.1.5-1) ... Selecting previously unselected package libxmu6:amd64. Preparing to unpack .../119-libxmu6_2%3a1.1.2-2_amd64.deb ... Unpacking libxmu6:amd64 (2:1.1.2-2) ... Selecting previously unselected package libxaw7:amd64. Preparing to unpack .../120-libxaw7_2%3a1.0.13-1_amd64.deb ... Unpacking libxaw7:amd64 (2:1.0.13-1) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../121-libxi6_2%3a1.7.9-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.7.9-1) ... Selecting previously unselected package libxxhash0:amd64. Preparing to unpack .../122-libxxhash0_0.6.5-2_amd64.deb ... Unpacking libxxhash0:amd64 (0.6.5-2) ... Selecting previously unselected package libzzip-0-13:amd64. Preparing to unpack .../123-libzzip-0-13_0.13.62-3.1ubuntu1_amd64.deb ... Unpacking libzzip-0-13:amd64 (0.13.62-3.1ubuntu1) ... Selecting previously unselected package texlive-binaries. Preparing to unpack .../124-texlive-binaries_2018.20181218.49446-2_amd64.deb ... Unpacking texlive-binaries (2018.20181218.49446-2) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../125-xdg-utils_1.1.3-1ubuntu2_all.deb ... Unpacking xdg-utils (1.1.3-1ubuntu2) ... Selecting previously unselected package texlive-base. Preparing to unpack .../126-texlive-base_2018.20190227-1_all.deb ... Unpacking texlive-base (2018.20190227-1) ... Selecting previously unselected package ocaml-base-nox. Preparing to unpack .../127-ocaml-base-nox_4.05.0-10ubuntu2_amd64.deb ... Unpacking ocaml-base-nox (4.05.0-10ubuntu2) ... Selecting previously unselected package hevea. Preparing to unpack .../128-hevea_2.32-2_all.deb ... Unpacking hevea (2.32-2) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../129-libblas3_3.8.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.8.0-2) ... Selecting previously unselected package libevent-2.1-6:amd64. Preparing to unpack .../130-libevent-2.1-6_2.1.8-stable-4build1_amd64.deb ... Unpacking libevent-2.1-6:amd64 (2.1.8-stable-4build1) ... Selecting previously unselected package libevent-core-2.1-6:amd64. Preparing to unpack .../131-libevent-core-2.1-6_2.1.8-stable-4build1_amd64.deb ... Unpacking libevent-core-2.1-6:amd64 (2.1.8-stable-4build1) ... Selecting previously unselected package libevent-pthreads-2.1-6:amd64. Preparing to unpack .../132-libevent-pthreads-2.1-6_2.1.8-stable-4build1_amd64.deb ... Unpacking libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4build1) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../133-libexpat1-dev_2.2.6-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.2.6-1) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../134-libnl-3-200_3.4.0-1_amd64.deb ... Unpacking libnl-3-200:amd64 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../135-libnl-route-3-200_3.4.0-1_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.4.0-1) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../136-libibverbs1_22.1-1_amd64.deb ... Unpacking libibverbs1:amd64 (22.1-1) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../137-libpsm-infinipath1_3.3+20.604758e7-6_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../138-libpsm2-2_11.2.78-1_amd64.deb ... Unpacking libpsm2-2 (11.2.78-1) ... Selecting previously unselected package librdmacm1:amd64. Preparing to unpack .../139-librdmacm1_22.1-1_amd64.deb ... Unpacking librdmacm1:amd64 (22.1-1) ... Selecting previously unselected package libfabric1. Preparing to unpack .../140-libfabric1_1.6.2-3_amd64.deb ... Unpacking libfabric1 (1.6.2-3) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../141-libgfortran5_9-20190227-0ubuntu1_amd64.deb ... Unpacking libgfortran5:amd64 (9-20190227-0ubuntu1) ... Selecting previously unselected package libimagequant0:amd64. Preparing to unpack .../142-libimagequant0_2.12.2-1_amd64.deb ... Unpacking libimagequant0:amd64 (2.12.2-1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../143-libjs-jquery_3.3.1~dfsg-1_all.deb ... Unpacking libjs-jquery (3.3.1~dfsg-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../144-libjs-jquery-ui_1.12.1+dfsg-5_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-5) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../145-liblapack3_3.8.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.8.0-2) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../146-liblcms2-2_2.9-3_amd64.deb ... Unpacking liblcms2-2:amd64 (2.9-3) ... Selecting previously unselected package liblmdb0:amd64. Preparing to unpack .../147-liblmdb0_0.9.23-0ubuntu1_amd64.deb ... Unpacking liblmdb0:amd64 (0.9.23-0ubuntu1) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../148-libltdl7_2.4.6-10_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-10) ... Selecting previously unselected package libmbedcrypto3:amd64. Preparing to unpack .../149-libmbedcrypto3_2.16.0-1_amd64.deb ... Unpacking libmbedcrypto3:amd64 (2.16.0-1) ... Selecting previously unselected package libmbedx509-0:amd64. Preparing to unpack .../150-libmbedx509-0_2.16.0-1_amd64.deb ... Unpacking libmbedx509-0:amd64 (2.16.0-1) ... Selecting previously unselected package libmbedtls12:amd64. Preparing to unpack .../151-libmbedtls12_2.16.0-1_amd64.deb ... Unpacking libmbedtls12:amd64 (2.16.0-1) ... Selecting previously unselected package libhwloc5:amd64. Preparing to unpack .../152-libhwloc5_1.11.12-3_amd64.deb ... Unpacking libhwloc5:amd64 (1.11.12-3) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../153-libpciaccess0_0.14-1_amd64.deb ... Unpacking libpciaccess0:amd64 (0.14-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../154-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../155-libhwloc-plugins_1.11.12-3_amd64.deb ... Unpacking libhwloc-plugins:amd64 (1.11.12-3) ... Selecting previously unselected package libpmix2:amd64. Preparing to unpack .../156-libpmix2_3.1.2-2_amd64.deb ... Unpacking libpmix2:amd64 (3.1.2-2) ... Selecting previously unselected package libopenmpi3:amd64. Preparing to unpack .../157-libopenmpi3_3.1.3-10_amd64.deb ... Unpacking libopenmpi3:amd64 (3.1.3-10) ... Selecting previously unselected package libpython2.7:amd64. Preparing to unpack .../158-libpython2.7_2.7.16~rc1-1_amd64.deb ... Unpacking libpython2.7:amd64 (2.7.16~rc1-1) ... Selecting previously unselected package libpython2.7-dev:amd64. Preparing to unpack .../159-libpython2.7-dev_2.7.16~rc1-1_amd64.deb ... Unpacking libpython2.7-dev:amd64 (2.7.16~rc1-1) ... Selecting previously unselected package libpython2-dev:amd64. Preparing to unpack .../160-libpython2-dev_2.7.15-4_amd64.deb ... Unpacking libpython2-dev:amd64 (2.7.15-4) ... Selecting previously unselected package libpython-dev:amd64. Preparing to unpack .../161-libpython-dev_2.7.15-4_amd64.deb ... Unpacking libpython-dev:amd64 (2.7.15-4) ... Selecting previously unselected package libpython-all-dev:amd64. Preparing to unpack .../162-libpython-all-dev_2.7.15-4_amd64.deb ... Unpacking libpython-all-dev:amd64 (2.7.15-4) ... Selecting previously unselected package libpython3.7:amd64. Preparing to unpack .../163-libpython3.7_3.7.2-3_amd64.deb ... Unpacking libpython3.7:amd64 (3.7.2-3) ... Selecting previously unselected package libpython3.7-dev:amd64. Preparing to unpack .../164-libpython3.7-dev_3.7.2-3_amd64.deb ... Unpacking libpython3.7-dev:amd64 (3.7.2-3) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../165-libpython3-dev_3.7.2-1_amd64.deb ... Unpacking libpython3-dev:amd64 (3.7.2-1) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../166-libpython3-all-dev_3.7.2-1_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.7.2-1) ... Selecting previously unselected package libwebpdemux2:amd64. Preparing to unpack .../167-libwebpdemux2_0.6.1-2_amd64.deb ... Unpacking libwebpdemux2:amd64 (0.6.1-2) ... Selecting previously unselected package libwebpmux3:amd64. Preparing to unpack .../168-libwebpmux3_0.6.1-2_amd64.deb ... Unpacking libwebpmux3:amd64 (0.6.1-2) ... Selecting previously unselected package mafft. Preparing to unpack .../169-mafft_7.407-2_amd64.deb ... Unpacking mafft (7.407-2) ... Selecting previously unselected package muscle. Preparing to unpack .../170-muscle_1%3a3.8.1551-1_amd64.deb ... Unpacking muscle (1:3.8.1551-1) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../171-ncbi-data_6.1.20170106-6_all.deb ... Unpacking ncbi-data (6.1.20170106-6) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../172-ncbi-blast+_2.8.1-1_amd64.deb ... Unpacking ncbi-blast+ (2.8.1-1) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../173-openmpi-common_3.1.3-10_all.deb ... Unpacking openmpi-common (3.1.3-10) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../174-openmpi-bin_3.1.3-10_amd64.deb ... Unpacking openmpi-bin (3.1.3-10) ... Selecting previously unselected package phylip. Preparing to unpack .../175-phylip_1%3a3.697+dfsg-1_amd64.deb ... Unpacking phylip (1:3.697+dfsg-1) ... Selecting previously unselected package phyml. Preparing to unpack .../176-phyml_3%3a3.3.20180621-2ubuntu1_amd64.deb ... Unpacking phyml (3:3.3.20180621-2ubuntu1) ... Selecting previously unselected package prank. Preparing to unpack .../177-prank_0.0.170427+dfsg-2_amd64.deb ... Unpacking prank (0.0.170427+dfsg-2) ... Selecting previously unselected package preview-latex-style. Preparing to unpack .../178-preview-latex-style_11.91-1ubuntu1_all.deb ... Unpacking preview-latex-style (11.91-1ubuntu1) ... Selecting previously unselected package probcons. Preparing to unpack .../179-probcons_1.12-12_amd64.deb ... Unpacking probcons (1.12-12) ... Selecting previously unselected package python-all. Preparing to unpack .../180-python-all_2.7.15-4_amd64.deb ... Unpacking python-all (2.7.15-4) ... Selecting previously unselected package python2.7-dev. Preparing to unpack .../181-python2.7-dev_2.7.16~rc1-1_amd64.deb ... Unpacking python2.7-dev (2.7.16~rc1-1) ... Selecting previously unselected package python2-dev. Preparing to unpack .../182-python2-dev_2.7.15-4_amd64.deb ... Unpacking python2-dev (2.7.15-4) ... Selecting previously unselected package python-dev. Preparing to unpack .../183-python-dev_2.7.15-4_amd64.deb ... Unpacking python-dev (2.7.15-4) ... Selecting previously unselected package python-all-dev. Preparing to unpack .../184-python-all-dev_2.7.15-4_amd64.deb ... Unpacking python-all-dev (2.7.15-4) ... Selecting previously unselected package python-backports.functools-lru-cache. Preparing to unpack .../185-python-backports.functools-lru-cache_1.5-2_all.deb ... Unpacking python-backports.functools-lru-cache (1.5-2) ... Selecting previously unselected package python-six. Preparing to unpack .../186-python-six_1.12.0-1_all.deb ... Unpacking python-six (1.12.0-1) ... Selecting previously unselected package python-cycler. Preparing to unpack .../187-python-cycler_0.10.0-1_all.deb ... Unpacking python-cycler (0.10.0-1) ... Selecting previously unselected package python-dateutil. Preparing to unpack .../188-python-dateutil_2.7.3-3_all.deb ... Unpacking python-dateutil (2.7.3-3) ... Selecting previously unselected package python-decorator. Preparing to unpack .../189-python-decorator_4.3.0-1.1_all.deb ... Unpacking python-decorator (4.3.0-1.1) ... Selecting previously unselected package python-isodate. Preparing to unpack .../190-python-isodate_0.6.0-1_all.deb ... Unpacking python-isodate (0.6.0-1) ... Selecting previously unselected package python-pkg-resources. Preparing to unpack .../191-python-pkg-resources_40.8.0-1_all.deb ... Unpacking python-pkg-resources (40.8.0-1) ... Selecting previously unselected package python-kiwisolver. Preparing to unpack .../192-python-kiwisolver_1.0.1-2build2_amd64.deb ... Unpacking python-kiwisolver (1.0.1-2build2) ... Selecting previously unselected package python-matplotlib2-data. Preparing to unpack .../193-python-matplotlib2-data_2.2.3-6_all.deb ... Unpacking python-matplotlib2-data (2.2.3-6) ... Selecting previously unselected package python-pyparsing. Preparing to unpack .../194-python-pyparsing_2.2.0+dfsg1-2_all.deb ... Unpacking python-pyparsing (2.2.0+dfsg1-2) ... Selecting previously unselected package python-tz. Preparing to unpack .../195-python-tz_2018.9-1_all.deb ... Unpacking python-tz (2018.9-1) ... Selecting previously unselected package python-numpy. Preparing to unpack .../196-python-numpy_1%3a1.16.1-1ubuntu1_amd64.deb ... Unpacking python-numpy (1:1.16.1-1ubuntu1) ... Selecting previously unselected package python-subprocess32. Preparing to unpack .../197-python-subprocess32_3.5.3-1_amd64.deb ... Unpacking python-subprocess32 (3.5.3-1) ... Selecting previously unselected package python-matplotlib. Preparing to unpack .../198-python-matplotlib_2.2.3-6_amd64.deb ... Unpacking python-matplotlib (2.2.3-6) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../199-python-matplotlib-data_3.0.2-2_all.deb ... Unpacking python-matplotlib-data (3.0.2-2) ... Selecting previously unselected package python-mysqldb. Preparing to unpack .../200-python-mysqldb_1.3.10-2_amd64.deb ... Unpacking python-mysqldb (1.3.10-2) ... Selecting previously unselected package python-pil:amd64. Preparing to unpack .../201-python-pil_5.4.1-1_amd64.deb ... Unpacking python-pil:amd64 (5.4.1-1) ... Selecting previously unselected package python-psycopg2. Preparing to unpack .../202-python-psycopg2_2.7.7-1_amd64.deb ... Unpacking python-psycopg2 (2.7.7-1) ... Selecting previously unselected package python-rdflib. Preparing to unpack .../203-python-rdflib_4.2.2-2_all.deb ... Unpacking python-rdflib (4.2.2-2) ... Selecting previously unselected package python-renderpm:amd64. Preparing to unpack .../204-python-renderpm_3.5.13-1_amd64.deb ... Unpacking python-renderpm:amd64 (3.5.13-1) ... Selecting previously unselected package python-reportlab-accel:amd64. Preparing to unpack .../205-python-reportlab-accel_3.5.13-1_amd64.deb ... Unpacking python-reportlab-accel:amd64 (3.5.13-1) ... Selecting previously unselected package python-reportlab. Preparing to unpack .../206-python-reportlab_3.5.13-1_all.deb ... Unpacking python-reportlab (3.5.13-1) ... Selecting previously unselected package python-setuptools. Preparing to unpack .../207-python-setuptools_40.8.0-1_all.deb ... Unpacking python-setuptools (40.8.0-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../208-python3-all_3.7.2-1_amd64.deb ... Unpacking python3-all (3.7.2-1) ... Selecting previously unselected package python3.7-dev. Preparing to unpack .../209-python3.7-dev_3.7.2-3_amd64.deb ... Unpacking python3.7-dev (3.7.2-3) ... Selecting previously unselected package python3-dev. Preparing to unpack .../210-python3-dev_3.7.2-1_amd64.deb ... Unpacking python3-dev (3.7.2-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../211-python3-all-dev_3.7.2-1_amd64.deb ... Unpacking python3-all-dev (3.7.2-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../212-python3-six_1.12.0-1_all.deb ... Unpacking python3-six (1.12.0-1) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../213-python3-cycler_0.10.0-1_all.deb ... Unpacking python3-cycler (0.10.0-1) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../214-python3-dateutil_2.7.3-3_all.deb ... Unpacking python3-dateutil (2.7.3-3) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../215-python3-decorator_4.3.0-1.1_all.deb ... Unpacking python3-decorator (4.3.0-1.1) ... Selecting previously unselected package python3-isodate. Preparing to unpack .../216-python3-isodate_0.6.0-1_all.deb ... Unpacking python3-isodate (0.6.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../217-python3-pkg-resources_40.8.0-1_all.deb ... Unpacking python3-pkg-resources (40.8.0-1) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../218-python3-kiwisolver_1.0.1-2build2_amd64.deb ... Unpacking python3-kiwisolver (1.0.1-2build2) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../219-python3-pyparsing_2.2.0+dfsg1-2_all.deb ... Unpacking python3-pyparsing (2.2.0+dfsg1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../220-python3-numpy_1%3a1.16.1-1ubuntu1_amd64.deb ... Unpacking python3-numpy (1:1.16.1-1ubuntu1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../221-python3-matplotlib_3.0.2-2_amd64.deb ... Unpacking python3-matplotlib (3.0.2-2) ... Selecting previously unselected package python3-mysqldb. Preparing to unpack .../222-python3-mysqldb_1.3.10-2_amd64.deb ... Unpacking python3-mysqldb (1.3.10-2) ... Selecting previously unselected package python3-pil:amd64. Preparing to unpack .../223-python3-pil_5.4.1-1_amd64.deb ... Unpacking python3-pil:amd64 (5.4.1-1) ... Selecting previously unselected package python3-psycopg2. Preparing to unpack .../224-python3-psycopg2_2.7.7-1_amd64.deb ... Unpacking python3-psycopg2 (2.7.7-1) ... Selecting previously unselected package python3-rdflib. Preparing to unpack .../225-python3-rdflib_4.2.2-2_all.deb ... Unpacking python3-rdflib (4.2.2-2) ... Selecting previously unselected package python3-renderpm:amd64. Preparing to unpack .../226-python3-renderpm_3.5.13-1_amd64.deb ... Unpacking python3-renderpm:amd64 (3.5.13-1) ... Selecting previously unselected package python3-reportlab-accel:amd64. Preparing to unpack .../227-python3-reportlab-accel_3.5.13-1_amd64.deb ... Unpacking python3-reportlab-accel:amd64 (3.5.13-1) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../228-python3-reportlab_3.5.13-1_all.deb ... Unpacking python3-reportlab (3.5.13-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../229-python3-setuptools_40.8.0-1_all.deb ... Unpacking python3-setuptools (40.8.0-1) ... Selecting previously unselected package raxml. Preparing to unpack .../230-raxml_8.2.12+dfsg-1_amd64.deb ... Unpacking raxml (8.2.12+dfsg-1) ... Selecting previously unselected package t-coffee. Preparing to unpack .../231-t-coffee_12.00.7fb08c2-4_amd64.deb ... Unpacking t-coffee (12.00.7fb08c2-4) ... Selecting previously unselected package texlive-fonts-recommended. Preparing to unpack .../232-texlive-fonts-recommended_2018.20190227-1_all.deb ... Unpacking texlive-fonts-recommended (2018.20190227-1) ... Selecting previously unselected package texlive-latex-base. Preparing to unpack .../233-texlive-latex-base_2018.20190227-1_all.deb ... Unpacking texlive-latex-base (2018.20190227-1) ... Selecting previously unselected package texlive-latex-recommended. Preparing to unpack .../234-texlive-latex-recommended_2018.20190227-1_all.deb ... Unpacking texlive-latex-recommended (2018.20190227-1) ... Selecting previously unselected package texlive-pictures. Preparing to unpack .../235-texlive-pictures_2018.20190227-1_all.deb ... Unpacking texlive-pictures (2018.20190227-1) ... Selecting previously unselected package texlive-latex-extra. Preparing to unpack .../236-texlive-latex-extra_2018.20190227-1_all.deb ... Unpacking texlive-latex-extra (2018.20190227-1) ... Selecting previously unselected package wise-data. Preparing to unpack .../237-wise-data_2.4.1-21_all.deb ... Unpacking wise-data (2.4.1-21) ... Selecting previously unselected package wise. Preparing to unpack .../238-wise_2.4.1-21_amd64.deb ... Unpacking wise (2.4.1-21) ... Selecting previously unselected package fasttree. Preparing to unpack .../239-fasttree_2.1.10-2_amd64.deb ... Unpacking fasttree (2.1.10-2) ... Selecting previously unselected package python-scipy. Preparing to unpack .../240-python-scipy_1.2.1-0ubuntu1_amd64.deb ... Unpacking python-scipy (1.2.1-0ubuntu1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../241-python3-scipy_1.2.1-0ubuntu1_amd64.deb ... Unpacking python3-scipy (1.2.1-0ubuntu1) ... Selecting previously unselected package sbuild-build-depends-python-biopython-dummy. Preparing to unpack .../242-sbuild-build-depends-python-biopython-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-python-biopython-dummy (0.invalid.0) ... Setting up libgs9-common (9.26~dfsg+0-0ubuntu6) ... Setting up libboost-program-options1.67.0:amd64 (1.67.0-13) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up liblmdb0:amd64 (0.9.23-0ubuntu1) ... Setting up libgraphite2-3:amd64 (1.3.13-7) ... Setting up liblcms2-2:amd64 (2.9-3) ... Setting up ncbi-data (6.1.20170106-6) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up mysql-common (5.8+1.0.5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1) ... Setting up libkeyutils1:amd64 (1.6-5) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up mime-support (3.60ubuntu1) ... Setting up libtexlua52:amd64 (2018.20181218.49446-2) ... Setting up libmysqlclient20:amd64 (5.7.25-1) ... Setting up probcons (1.12-12) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up libtexlua53:amd64 (2018.20181218.49446-2) ... Setting up mafft (7.407-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.59.3-2) ... No schema files found: doing nothing. Setting up bwa (0.7.17-2) ... Setting up fonts-lyx (2.3.2-1) ... Setting up libijs-0.35:amd64 (0.35-13) ... Setting up libtexluajit2:amd64 (2018.20181218.49446-2) ... Setting up libbrotli1:amd64 (1.0.7-2) ... Setting up phylip (1:3.697+dfsg-1) ... Setting up x11-common (1:7.7+19ubuntu9) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libmagic1:amd64 (1:5.35-4) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libzzip-0-13:amd64 (0.13.62-3.1ubuntu1) ... Setting up file (1:5.35-4) ... Setting up libnetpbm10 (2:10.0-15.3build1) ... Setting up muscle (1:3.8.1551-1) ... Setting up emboss-data (6.6.0+dfsg-7) ... Setting up libldap-common (2.4.47+dfsg-3ubuntu1) ... Setting up libjbig0:amd64 (2.1-3.1build1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up t-coffee (12.00.7fb08c2-4) ... Setting up poppler-data (0.4.9-2) ... Setting up libkrb5support0:amd64 (1.17-1) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Setting up libpython2.7-stdlib:amd64 (2.7.16~rc1-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.2.6-1) ... Setting up libfreetype6:amd64 (2.9.1-3) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libjbig2dec0:amd64 (0.15-2) ... Setting up libteckit0:amd64 (2.5.8+ds2-5ubuntu1) ... Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.4) ... Setting up libavahi-common-data:amd64 (0.7-4ubuntu5) ... Setting up libdbus-1-3:amd64 (1.12.12-1ubuntu1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up t1utils (1.41-3) ... Setting up libimagequant0:amd64 (2.12.2-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... Setting up wise-data (2.4.1-21) ... Setting up libk5crypto3:amd64 (1.17-1) ... Setting up libjpeg-turbo8:amd64 (2.0.1-0ubuntu2) ... Setting up libltdl7:amd64 (2.4.6-10) ... Setting up libkpathsea6:amd64 (2018.20181218.49446-2) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1) ... Setting up libevent-core-2.1-6:amd64 (2.1.8-stable-4build1) ... Setting up libgfortran5:amd64 (9-20190227-0ubuntu1) ... Setting up libroken18-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libevent-2.1-6:amd64 (2.1.8-stable-4build1) ... Setting up libnuma1:amd64 (2.0.12-1) ... Setting up python-matplotlib2-data (2.2.3-6) ... Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... Setting up libxxhash0:amd64 (0.6.5-2) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libpsm2-2 (11.2.78-1) ... Setting up openmpi-common (3.1.3-10) ... Setting up clustalw (2.1+lgpl-6) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libmbedcrypto3:amd64 (2.16.0-1) ... Setting up libharfbuzz0b:amd64 (2.3.1-1) ... Setting up fasttree (2.1.10-2) ... Setting up libkrb5-3:amd64 (1.17-1) ... Setting up ocaml-base-nox (4.05.0-10ubuntu2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-1) ... Setting up libboost-system1.67.0:amd64 (1.67.0-13) ... Setting up python-matplotlib-data (3.0.2-2) ... Setting up libwebpmux3:amd64 (0.6.1-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libelf1:amd64 (0.176-1) ... Setting up dialign (2.2.1-10) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7ubuntu3) ... Setting up xdg-utils (1.1.3-1ubuntu2) ... Setting up libsynctex2:amd64 (2018.20181218.49446-2) ... Setting up prank (0.0.170427+dfsg-2) ... Setting up libheimbase1-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libargtable2-0 (13-1) ... Setting up raxml (8.2.12+dfsg-1) ... Setting up libpotrace0:amd64 (1.15-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.1.1-1) ... Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4build1) ... Setting up libpaper1:amd64 (1.1.26) ... Creating config file /etc/papersize with new version Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libpython3.7-stdlib:amd64 (3.7.2-3) ... Setting up libpython2.7:amd64 (2.7.16~rc1-1) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libpython2.7-dev:amd64 (2.7.16~rc1-1) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libharfbuzz-icu0:amd64 (2.3.1-1) ... Setting up python2.7 (2.7.16~rc1-1) ... Setting up libwoff1:amd64 (1.0.2-1build1) ... Setting up libboost-thread1.67.0:amd64 (1.67.0-13) ... Setting up libpython3.7:amd64 (3.7.2-3) ... Setting up libtool (2.4.6-10) ... Setting up libpython2-stdlib:amd64 (2.7.15-4) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libmbedx509-0:amd64 (2.16.0-1) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up wise (2.4.1-21) ... Setting up libhwloc5:amd64 (1.11.12-3) ... Setting up libpython3.7-dev:amd64 (3.7.2-3) ... Setting up libwebpdemux2:amd64 (0.6.1-2) ... Setting up libasn1-8-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libmbedtls12:amd64 (2.16.0-1) ... Setting up libavahi-common3:amd64 (0.7-4ubuntu5) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libpaper-utils (1.1.26) ... Setting up clustalo (1.2.4-2) ... Setting up dssp (3.0.0-3) ... Setting up libhwloc-plugins:amd64 (1.11.12-3) ... Setting up libhcrypto4-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up python2 (2.7.15-4) ... Setting up libnl-route-3-200:amd64 (3.4.0-1) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libpython-stdlib:amd64 (2.7.15-4) ... Setting up libwind0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libptexenc1:amd64 (2018.20181218.49446-2) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-1) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libpython2-dev:amd64 (2.7.15-4) ... Setting up libtiff5:amd64 (4.0.10-4) ... Setting up libfontconfig1:amd64 (2.13.1-2ubuntu2) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up python (2.7.15-4) ... Setting up libavahi-client3:amd64 (0.7-4ubuntu5) ... Setting up libpython3-stdlib:amd64 (3.7.2-1) ... Setting up python-mysqldb (1.3.10-2) ... Setting up python2.7-dev (2.7.16~rc1-1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.2-3) ... Setting up libibverbs1:amd64 (22.1-1) ... Setting up flex (2.6.4-6.2) ... Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:amd64 (3.7.2-1) ... Setting up python2-dev (2.7.15-4) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpmix2:amd64 (3.1.2-2) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up openssh-client (1:7.9p1-9) ... Setting up libhx509-5-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up preview-latex-style (11.91-1ubuntu1) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up python3 (3.7.2-1) ... Setting up python-pil:amd64 (5.4.1-1) ... Setting up python-all (2.7.15-4) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3.7-dev (3.7.2-3) ... Setting up libcairo2:amd64 (1.16.0-3) ... Setting up python-decorator (4.3.0-1.1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-dev:amd64 (2.7.15-4) ... Setting up python-renderpm:amd64 (3.5.13-1) ... Setting up python-six (1.12.0-1) ... Setting up ncbi-blast+ (2.8.1-1) ... Setting up python3-mysqldb (1.3.10-2) ... Setting up python3-six (1.12.0-1) ... Setting up python3-isodate (0.6.0-1) ... Setting up python3-pil:amd64 (5.4.1-1) ... Setting up python-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-decorator (4.3.0-1.1) ... Setting up python-dateutil (2.7.3-3) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python-subprocess32 (3.5.3-1) ... Setting up libpython3-all-dev:amd64 (3.7.2-1) ... Setting up python3-cycler (0.10.0-1) ... Setting up python3-reportlab-accel:amd64 (3.5.13-1) ... Setting up libgd3:amd64 (2.2.5-5.1) ... Setting up python-isodate (0.6.0-1) ... Setting up python-setuptools (40.8.0-1) ... Setting up python-backports.functools-lru-cache (1.5-2) ... Setting up netpbm (2:10.0-15.3build1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up python3-reportlab (3.5.13-1) ... Setting up libcups2:amd64 (2.2.10-4) ... Setting up python-tz (2018.9-1) ... Setting up python-kiwisolver (1.0.1-2build2) ... Setting up python3-rdflib (4.2.2-2) ... Setting up python3-dateutil (2.7.3-3) ... Setting up python-reportlab-accel:amd64 (3.5.13-1) ... Setting up python3-lib2to3 (3.7.2-3ubuntu1) ... Setting up python-rdflib (4.2.2-2) ... Setting up python-dev (2.7.15-4) ... Setting up libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up python3-pkg-resources (40.8.0-1) ... Setting up python3-distutils (3.7.2-3ubuntu1) ... Setting up dh-python (3.20180927ubuntu2) ... Setting up librdmacm1:amd64 (22.1-1) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up python3-renderpm:amd64 (3.5.13-1) ... Setting up python3-setuptools (40.8.0-1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libpython-all-dev:amd64 (2.7.15-4) ... Setting up python-numpy (1:1.16.1-1ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up python-cycler (0.10.0-1) ... Setting up python3-all (3.7.2-1) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libcupsimage2:amd64 (2.2.10-4) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up python3-dev (3.7.2-1) ... Setting up python3-kiwisolver (1.0.1-2build2) ... Setting up python3-numpy (1:1.16.1-1ubuntu1) ... Setting up python-reportlab (3.5.13-1) ... Setting up python-all-dev (2.7.15-4) ... Setting up python-scipy (1.2.1-0ubuntu1) ... Setting up python3-all-dev (3.7.2-1) ... Setting up libfabric1 (1.6.2-3) ... Setting up python3-matplotlib (3.0.2-2) ... Setting up python3-scipy (1.2.1-0ubuntu1) ... Setting up libgs9:amd64 (9.26~dfsg+0-0ubuntu6) ... Setting up python-matplotlib (2.2.3-6) ... Setting up libopenmpi3:amd64 (3.1.3-10) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3ubuntu1) ... Setting up ghostscript (9.26~dfsg+0-0ubuntu6) ... Setting up texlive-binaries (2018.20181218.49446-2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper Setting up openmpi-bin (3.1.3-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up phyml (3:3.3.20180621-2ubuntu1) ... Setting up libpq5:amd64 (11.2-1) ... Setting up python-psycopg2 (2.7.7-1) ... Setting up texlive-latex-base (2018.20190227-1) ... Setting up texlive-latex-recommended (2018.20190227-1) ... Setting up python3-psycopg2 (2.7.7-1) ... Setting up hevea (2.32-2) ... Setting up texlive-pictures (2018.20190227-1) ... Setting up texlive-fonts-recommended (2018.20190227-1) ... Setting up emboss-lib (6.6.0+dfsg-7) ... Setting up emboss (6.6.0+dfsg-7) ... Setting up texlive-latex-extra (2018.20190227-1) ... Setting up debhelper (12ubuntu1) ... Setting up sbuild-build-depends-python-biopython-dummy (0.invalid.0) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.1-1) ... Processing triggers for libc-bin (2.29-0ubuntu1) ... Processing triggers for systemd (240-6ubuntu1) ... Processing triggers for tex-common (6.11) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-142-generic amd64 (x86_64) Toolchain package versions: binutils_2.32-4ubuntu1 dpkg-dev_1.19.5ubuntu1 g++-8_8.3.0-2ubuntu1 gcc-8_8.3.0-2ubuntu1 libc6-dev_2.29-0ubuntu1 libstdc++-8-dev_8.3.0-2ubuntu1 libstdc++6_9-20190227-0ubuntu1 linux-libc-dev_4.19.0-13.14 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-1 apt_1.8.0~rc4 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.46 bash_5.0-2ubuntu1 binutils_2.32-4ubuntu1 binutils-common_2.32-4ubuntu1 binutils-x86-64-linux-gnu_2.32-4ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu2 build-essential_12.6ubuntu1 bwa_0.7.17-2 bzip2_1.0.6-9 ca-certificates_20190110 clustalo_1.2.4-2 clustalw_2.1+lgpl-6 coreutils_8.30-1ubuntu1 cpp_4:8.3.0-1ubuntu1 cpp-8_8.3.0-2ubuntu1 dash_0.5.10.2-4ubuntu1 debconf_1.5.71 debhelper_12ubuntu1 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20180927ubuntu2 dh-strip-nondeterminism_1.1.1-1 dialign_2.2.1-10 diffutils_1:3.7-2 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.5ubuntu1 dpkg-dev_1.19.5ubuntu1 dssp_3.0.0-3 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 emboss_6.6.0+dfsg-7 emboss-data_6.6.0+dfsg-7 emboss-lib_6.6.0+dfsg-7 fakeroot_1.23-1 fasttree_2.1.10-2 fdisk_2.33.1-0.1ubuntu2 file_1:5.35-4 findutils_4.6.0+git+20190209-2 flex_2.6.4-6.2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 fonts-lyx_2.3.2-1 g++_4:8.3.0-1ubuntu1 g++-8_8.3.0-2ubuntu1 gcc_4:8.3.0-1ubuntu1 gcc-8_8.3.0-2ubuntu1 gcc-8-base_8.3.0-2ubuntu1 gcc-9-base_9-20190227-0ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 ghostscript_9.26~dfsg+0-0ubuntu6 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1 groff-base_1.22.4-3 gsfonts_1:8.11+urwcyr1.0.7~pre44-4.4 gzip_1.9-3 hevea_2.32-2 hostname_3.21 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~rc4 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libargtable2-0_13-1 libasan5_9-20190227-0ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libassuan0_2.5.2-1 libatomic1_9-20190227-0ubuntu1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libavahi-client3_0.7-4ubuntu5 libavahi-common-data_0.7-4ubuntu5 libavahi-common3_0.7-4ubuntu5 libbinutils_2.32-4ubuntu1 libblas3_3.8.0-2 libblkid1_2.33.1-0.1ubuntu2 libboost-program-options1.67.0_1.67.0-13 libboost-system1.67.0_1.67.0-13 libboost-thread1.67.0_1.67.0-13 libbrotli1_1.0.7-2 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.29-0ubuntu1 libc-dev-bin_2.29-0ubuntu1 libc6_2.29-0ubuntu1 libc6-dev_2.29-0ubuntu1 libcairo2_1.16.0-3 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_9-20190227-0ubuntu1 libcom-err2_1.44.5-1 libcomerr2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1ubuntu1 libcups2_2.2.10-4 libcupsimage2_2.2.10-4 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1ubuntu1 libdebconfclient0_0.247ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.5ubuntu1 libedit2_3.1-20181209-1 libelf1_0.176-1 libevent-2.1-6_2.1.8-stable-4build1 libevent-core-2.1-6_2.1.8-stable-4build1 libevent-pthreads-2.1-6_2.1.8-stable-4build1 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfabric1_1.6.2-3 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.1-1 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.9.1-3 libgcc-8-dev_8.3.0-2ubuntu1 libgcc1_1:9-20190227-0ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgd3_2.2.5-5.1 libgdbm-compat4_1.18.1-3 libgdbm6_1.18.1-3 libgfortran5_9-20190227-0ubuntu1 libglib2.0-0_2.59.3-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_9-20190227-0ubuntu1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgs9_9.26~dfsg+0-0ubuntu6 libgs9-common_9.26~dfsg+0-0ubuntu6 libgssapi-krb5-2_1.17-1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libharfbuzz-icu0_2.3.1-1 libharfbuzz0b_2.3.1-1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1-1 libhpdf-2.3.0_2.3.0+dfsg-1 libhwloc-plugins_1.11.12-3 libhwloc5_1.11.12-3 libhx509-5-heimdal_7.5.0+dfsg-2.1 libibverbs1_22.1-1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libimagequant0_2.12.2-1 libip4tc0_1.8.2-3ubuntu1 libisl19_0.20-2 libitm1_9-20190227-0ubuntu1 libjbig0_2.1-3.1build1 libjbig2dec0_0.15-2 libjpeg-turbo8_2.0.1-0ubuntu2 libjpeg8_8c-2ubuntu8 libjs-jquery_3.3.1~dfsg-1 libjs-jquery-ui_1.12.1+dfsg-5 libjson-c3_0.12.1+ds-2 libk5crypto3_1.17-1 libkeyutils1_1.6-5 libkmod2_25-1ubuntu2 libkpathsea6_2018.20181218.49446-2 libkrb5-26-heimdal_7.5.0+dfsg-2.1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 liblapack3_3.8.0-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-3ubuntu1 libldap-common_2.4.47+dfsg-3ubuntu1 liblmdb0_0.9.23-0ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_9-20190227-0ubuntu1 libltdl7_2.4.6-10 liblz4-1_1.8.3-1ubuntu1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmbedcrypto3_2.16.0-1 libmbedtls12_2.16.0-1 libmbedx509-0_2.16.0-1 libmount1_2.33.1-0.1ubuntu2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libmpx2_8.3.0-2ubuntu1 libmysqlclient20_5.7.25-1 libncurses6_6.1+20181013-2ubuntu2 libncursesw6_6.1+20181013-2ubuntu2 libnetpbm10_2:10.0-15.3build1 libnettle6_3.4.1-1 libnl-3-200_3.4.0-1 libnl-route-3-200_3.4.0-1 libnpth0_1.6-1 libnuma1_2.0.12-1 libopenmpi3_3.1.3-10 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpaper-utils_1.1.26 libpaper1_1.1.26 libpciaccess0_0.14-1 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpmix2_3.1.2-2 libpng16-16_1.6.36-5 libpotrace0_1.15-1 libpq5_11.2-1 libprocps7_2:3.3.15-2ubuntu2 libpsm-infinipath1_3.3+20.604758e7-6 libpsm2-2_11.2.78-1 libptexenc1_2018.20181218.49446-2 libpython-all-dev_2.7.15-4 libpython-dev_2.7.15-4 libpython-stdlib_2.7.15-4 libpython2-dev_2.7.15-4 libpython2-stdlib_2.7.15-4 libpython2.7_2.7.16~rc1-1 libpython2.7-dev_2.7.16~rc1-1 libpython2.7-minimal_2.7.16~rc1-1 libpython2.7-stdlib_2.7.16~rc1-1 libpython3-all-dev_3.7.2-1 libpython3-dev_3.7.2-1 libpython3-stdlib_3.7.2-1 libpython3.7_3.7.2-3 libpython3.7-dev_3.7.2-3 libpython3.7-minimal_3.7.2-3 libpython3.7-stdlib_3.7.2-3 libquadmath0_9-20190227-0ubuntu1 librdmacm1_22.1-1 libreadline7_7.0-5 libreadline8_8.0-1 libroken18-heimdal_7.5.0+dfsg-2.1 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1ubuntu2 libsqlite3-0_3.27.2-1 libss2_1.44.5-1 libssl1.1_1.1.1b-1ubuntu1 libstdc++-8-dev_8.3.0-2ubuntu1 libstdc++6_9-20190227-0ubuntu1 libsynctex2_2018.20181218.49446-2 libsystemd0_240-6ubuntu1 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5ubuntu1 libtexlua52_2018.20181218.49446-2 libtexlua53_2018.20181218.49446-2 libtexluajit2_2018.20181218.49446-2 libtiff5_4.0.10-4 libtinfo6_6.1+20181013-2ubuntu2 libtool_2.4.6-10 libtsan0_9-20190227-0ubuntu1 libubsan1_9-20190227-0ubuntu1 libuchardet0_0.0.6-3 libudev1_240-6ubuntu1 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.33.1-0.1ubuntu2 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-2.1 libwoff1_1.0.2-1build1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-7ubuntu3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libxxhash0_0.6.5-2 libzstd1_1.3.8+dfsg-3 libzzip-0-13_0.13.62-3.1ubuntu1 linux-libc-dev_4.19.0-13.14 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu1 lsb-base_10.2018112800ubuntu1 m4_1.4.18-2 mafft_7.407-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17ubuntu3 mime-support_3.60ubuntu1 mount_2.33.1-0.1ubuntu2 multiarch-support_2.29-0ubuntu1 muscle_1:3.8.1551-1 mysql-common_5.8+1.0.5 ncbi-blast+_2.8.1-1 ncbi-data_6.1.20170106-6 ncurses-base_6.1+20181013-2ubuntu2 ncurses-bin_6.1+20181013-2ubuntu2 netpbm_2:10.0-15.3build1 ocaml-base-nox_4.05.0-10ubuntu2 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-bin_3.1.3-10 openmpi-common_3.1.3-10 openssh-client_1:7.9p1-9 openssl_1.1.1b-1ubuntu1 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 phylip_1:3.697+dfsg-1 phyml_3:3.3.20180621-2ubuntu1 pinentry-curses_1.1.0-1build2 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 poppler-data_0.4.9-2 prank_0.0.170427+dfsg-2 preview-latex-style_11.91-1ubuntu1 probcons_1.12-12 procps_2:3.3.15-2ubuntu2 python_2.7.15-4 python-all_2.7.15-4 python-all-dev_2.7.15-4 python-backports.functools-lru-cache_1.5-2 python-cycler_0.10.0-1 python-dateutil_2.7.3-3 python-decorator_4.3.0-1.1 python-dev_2.7.15-4 python-isodate_0.6.0-1 python-kiwisolver_1.0.1-2build2 python-matplotlib_2.2.3-6 python-matplotlib-data_3.0.2-2 python-matplotlib2-data_2.2.3-6 python-minimal_2.7.15-4 python-mysqldb_1.3.10-2 python-numpy_1:1.16.1-1ubuntu1 python-pil_5.4.1-1 python-pkg-resources_40.8.0-1 python-psycopg2_2.7.7-1 python-pyparsing_2.2.0+dfsg1-2 python-rdflib_4.2.2-2 python-renderpm_3.5.13-1 python-reportlab_3.5.13-1 python-reportlab-accel_3.5.13-1 python-scipy_1.2.1-0ubuntu1 python-setuptools_40.8.0-1 python-six_1.12.0-1 python-subprocess32_3.5.3-1 python-tz_2018.9-1 python2_2.7.15-4 python2-dev_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.16~rc1-1 python2.7-dev_2.7.16~rc1-1 python2.7-minimal_2.7.16~rc1-1 python3_3.7.2-1 python3-all_3.7.2-1 python3-all-dev_3.7.2-1 python3-cycler_0.10.0-1 python3-dateutil_2.7.3-3 python3-decorator_4.3.0-1.1 python3-dev_3.7.2-1 python3-distutils_3.7.2-3ubuntu1 python3-isodate_0.6.0-1 python3-kiwisolver_1.0.1-2build2 python3-lib2to3_3.7.2-3ubuntu1 python3-matplotlib_3.0.2-2 python3-minimal_3.7.2-1 python3-mysqldb_1.3.10-2 python3-numpy_1:1.16.1-1ubuntu1 python3-pil_5.4.1-1 python3-pkg-resources_40.8.0-1 python3-psycopg2_2.7.7-1 python3-pyparsing_2.2.0+dfsg1-2 python3-rdflib_4.2.2-2 python3-renderpm_3.5.13-1 python3-reportlab_3.5.13-1 python3-reportlab-accel_3.5.13-1 python3-scipy_1.2.1-0ubuntu1 python3-setuptools_40.8.0-1 python3-six_1.12.0-1 python3.7_3.7.2-3 python3.7-dev_3.7.2-3 python3.7-minimal_3.7.2-3 raxml_8.2.12+dfsg-1 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biopython-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu1 systemd-sysv_240-6ubuntu1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 t-coffee_12.00.7fb08c2-4 t1utils_1.41-3 tar_1.30+dfsg-5 tex-common_6.11 texlive-base_2018.20190227-1 texlive-binaries_2018.20181218.49446-2 texlive-fonts-recommended_2018.20190227-1 texlive-latex-base_2018.20190227-1 texlive-latex-extra_2018.20190227-1 texlive-latex-recommended_2018.20190227-1 texlive-pictures_2018.20190227-1 ttf-bitstream-vera_1.10-8 tzdata_2018i-2 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1ubuntu2 wise_2.4.1-21 wise-data_2.4.1-21 x11-common_1:7.7+19ubuntu9 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Mar 4 19:24:55 2019 UTC gpgv: using RSA key 8BC600805AAC660FEB4D198383401A30B1CDE58F gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-biopython_1.73+dfsg-1ubuntu1.dsc dpkg-source: info: extracting python-biopython in python-biopython-1.73+dfsg dpkg-source: info: unpacking python-biopython_1.73+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biopython_1.73+dfsg-1ubuntu1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_mathml-qname.patch dpkg-source: info: applying privacy_breach.patch dpkg-source: info: applying reportlab3.5.patch dpkg-source: info: applying test_phenotype_fit-ppc64el.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16447221 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16447221 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16447221 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-biopython dpkg-buildpackage: info: source version 1.73+dfsg-1ubuntu1 dpkg-buildpackage: info: source distribution disco dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2,python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_clean pybuild --clean -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py clean running clean removing '/<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build' (and everything under it) 'build/bdist.linux-amd64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it pybuild --clean -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build' (and everything under it) 'build/bdist.linux-amd64' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; cd Doc && make distclean make[2]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc' make -C install make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. No file Installation.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) LaTeX Warning: Reference `sec:windows_install' on page 1 undefined on input lin e 108. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] LaTeX Warning: Reference `sec:is_working' on page 7 undefined on input line 460 . [7] LaTeX Warning: Reference `sec:unix_install' on page 8 undefined on input line 5 37. Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . LaTeX Warning: Reference `sec:is_working' on page 8 undefined on input line 558 . Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' [8] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) Package rerunfilecheck Warning: File `Installation.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 144000 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149747 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149889 bytes). Transcript written on Installation.log. hevea -fix Installation.tex Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:108: Warning: Undefined label: 'sec:windows_install' ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:460: Warning: Undefined label: 'sec:is_working' ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:537: Warning: Undefined label: 'sec:unix_install' ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:558: Warning: Undefined label: 'sec:is_working' ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element Fixpoint reached in 2 step(s) hevea -fix -text Installation.tex Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode Fixpoint reached in 2 step(s) make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' ( for f in install ; do make clean -C $f ; done ) make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Installation.aux rm -f Installation.log rm -f Installation.out rm -f Installation.toc rm -f Installation.haux rm -f Installation.htoc make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Tutorial.aux rm -f Tutorial.toc rm -f Tutorial.log rm -f Tutorial.out rm -f Tutorial.haux rm -f Tutorial.htoc rm -f biopdb_faq.aux rm -f biopdb_faq.log rm -f biopdb_faq.out rm -f Tutorial/*.aux ( for f in install ; do make distclean -C $f ; done ) make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f Installation.aux rm -f Installation.log rm -f Installation.out rm -f Installation.toc rm -f Installation.haux rm -f Installation.htoc rm -f Installation.pdf rm -f Installation.txt rm -f Installation.html make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' rm -f biopdb_faq.pdf rm -f Tutorial.pdf rm -f Tutorial.html rm -f Tutorial.txt rm -f *_motif.gif #output from hacha make[2]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc' rm -f Doc/install/Installation.pdf rm -f Doc/install/Installation.txt rm -f Doc/install/Installation.html rm -f Doc/Tutorial.pdf Doc/biopdb_faq.pdf rm -f Doc/Tutorial/*.aux rm -rf biopython.egg-info rm -rf .pybuild if [ -d Tests_avoid ] ; then \ mv Tests_avoid/* Tests ; \ rmdir Tests_avoid ; \ fi rm -rf debian/tmp_tests make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python-biopython.substvars debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python-biopython-sql.substvars debian/python3-biopython-sql.substvars debian/files rm -fr -- debian/python-biopython/ debian/tmp/ debian/python3-biopython/ debian/python-biopython-doc/ debian/python-biopython-sql/ debian/python3-biopython-sql/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python2,python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py config running config pybuild --configure -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_build pybuild --build -i python{version} -p 2.7 I: pybuild base:217: /usr/bin/python setup.py build running build running build_py creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/File.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align copying Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align copying Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application copying Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS copying Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign copying Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass copying Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal copying Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data copying Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez copying Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez copying Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank copying Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo copying Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo copying Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics copying Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG copying Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG copying Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline copying Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR copying Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway copying Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep copying Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen copying Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP copying Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics copying Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics copying Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene copying Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt copying Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt copying Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise copying Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k copying Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL copying BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy copying Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy copying Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype copying Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype running egg_info creating biopython.egg-info writing requirements to biopython.egg-info/requires.txt writing biopython.egg-info/PKG-INFO writing top-level names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt writing manifest file 'biopython.egg-info/SOURCES.txt' reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' copying Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/trie.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/trie.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio copying Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs copying Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus copying Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer copying Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster copying Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree copying Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree running build_ext building 'Bio.Align._aligners' extension creating build creating build/temp.linux-amd64-2.7 creating build/temp.linux-amd64-2.7/Bio creating build/temp.linux-amd64-2.7/Bio/Align x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Align/_aligners.c -o build/temp.linux-amd64-2.7/Bio/Align/_aligners.o Bio/Align/_aligners.c: In function ‘PathGenerator_length’: Bio/Align/_aligners.c:701:22: warning: ‘count’ may be used uninitialized in this function [-Wmaybe-uninitialized] self->length = length; ~~~~~~~~~~~~~^~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/Align/_aligners.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.so building 'Bio.cpairwise2' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.linux-amd64-2.7/Bio/cpairwise2module.o In file included from /usr/include/python2.7/Python.h:103, from Bio/cpairwise2module.c:14: Bio/cpairwise2module.c: In function ‘cpairwise2__make_score_matrix_fast’: /usr/include/python2.7/listobject.h:62:58: warning: ‘py_trace_row’ may be used uninitialized in this function [-Wmaybe-uninitialized] #define PyList_SET_ITEM(op, i, v) (((PyListObject *)(op))->ob_item[i] = (v)) ^~ Bio/cpairwise2module.c:343:34: note: ‘py_trace_row’ was declared here PyObject *py_score_row, *py_trace_row; ^~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/cpairwise2module.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-amd64-2.7/Bio/Nexus x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Nexus/cnexus.c -o build/temp.linux-amd64-2.7/Bio/Nexus/cnexus.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/Nexus/cnexus.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-amd64-2.7/Bio/PDB creating build/temp.linux-amd64-2.7/Bio/PDB/QCPSuperimposer x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-amd64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.so building 'Bio.motifs._pwm' extension creating build/temp.linux-amd64-2.7/Bio/motifs x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/motifs/_pwm.c -o build/temp.linux-amd64-2.7/Bio/motifs/_pwm.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/motifs/_pwm.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-amd64-2.7/Bio/Cluster x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Cluster/cluster.c -o build/temp.linux-amd64-2.7/Bio/Cluster/cluster.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Cluster/clustermodule.c -o build/temp.linux-amd64-2.7/Bio/Cluster/clustermodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/Cluster/cluster.o build/temp.linux-amd64-2.7/Bio/Cluster/clustermodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/_cluster.so building 'Bio.PDB.kdtrees' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/PDB/kdtrees.c -o build/temp.linux-amd64-2.7/Bio/PDB/kdtrees.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/PDB/kdtrees.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-amd64-2.7/Bio/KDTree x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/KDTree/KDTree.c -o build/temp.linux-amd64-2.7/Bio/KDTree/KDTree.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-amd64-2.7/Bio/KDTree/KDTreemodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/KDTree/KDTree.o build/temp.linux-amd64-2.7/Bio/KDTree/KDTreemodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/_CKDTree.so building 'Bio.trie' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/triemodule.c -o build/temp.linux-amd64-2.7/Bio/triemodule.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/trie.c -o build/temp.linux-amd64-2.7/Bio/trie.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-yILGzU/python2.7-2.7.16~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/Bio/triemodule.o build/temp.linux-amd64-2.7/Bio/trie.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.so pybuild --build -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/File.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align copying Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align copying Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application copying Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS copying Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign copying Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass copying Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal copying Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data copying Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez copying Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez copying Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank copying Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo copying Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo copying Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics copying Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG copying Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG copying Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline copying Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR copying Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway copying Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep copying Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen copying Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP copying Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics copying Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics copying Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene copying Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt copying Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt copying Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise copying Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k copying Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL copying BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy copying Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy copying Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype copying Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' copying Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/trie.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/trie.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio copying Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs copying Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus copying Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer copying Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster copying Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree copying Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree running build_ext building 'Bio.Align._aligners' extension creating build/temp.linux-amd64-3.7 creating build/temp.linux-amd64-3.7/Bio creating build/temp.linux-amd64-3.7/Bio/Align x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Align/_aligners.c -o build/temp.linux-amd64-3.7/Bio/Align/_aligners.o Bio/Align/_aligners.c: In function ‘PathGenerator_length’: Bio/Align/_aligners.c:701:22: warning: ‘count’ may be used uninitialized in this function [-Wmaybe-uninitialized] self->length = length; ~~~~~~~~~~~~~^~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/Align/_aligners.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so building 'Bio.cpairwise2' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/cpairwise2module.c -o build/temp.linux-amd64-3.7/Bio/cpairwise2module.o In file included from /usr/include/python3.7m/Python.h:108, from Bio/cpairwise2module.c:14: Bio/cpairwise2module.c: In function ‘cpairwise2__make_score_matrix_fast’: /usr/include/python3.7m/listobject.h:73:58: warning: ‘py_trace_row’ may be used uninitialized in this function [-Wmaybe-uninitialized] #define PyList_SET_ITEM(op, i, v) (((PyListObject *)(op))->ob_item[i] = (v)) ^~ Bio/cpairwise2module.c:343:34: note: ‘py_trace_row’ was declared here PyObject *py_score_row, *py_trace_row; ^~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/cpairwise2module.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-amd64-3.7/Bio/Nexus x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Nexus/cnexus.c -o build/temp.linux-amd64-3.7/Bio/Nexus/cnexus.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/Nexus/cnexus.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-amd64-3.7/Bio/PDB creating build/temp.linux-amd64-3.7/Bio/PDB/QCPSuperimposer x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-amd64-3.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so building 'Bio.motifs._pwm' extension creating build/temp.linux-amd64-3.7/Bio/motifs x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/motifs/_pwm.c -o build/temp.linux-amd64-3.7/Bio/motifs/_pwm.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/motifs/_pwm.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-amd64-3.7/Bio/Cluster x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Cluster/cluster.c -o build/temp.linux-amd64-3.7/Bio/Cluster/cluster.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/Cluster/clustermodule.c -o build/temp.linux-amd64-3.7/Bio/Cluster/clustermodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/Cluster/cluster.o build/temp.linux-amd64-3.7/Bio/Cluster/clustermodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so building 'Bio.PDB.kdtrees' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/PDB/kdtrees.c -o build/temp.linux-amd64-3.7/Bio/PDB/kdtrees.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/PDB/kdtrees.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-amd64-3.7/Bio/KDTree x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/KDTree/KDTree.c -o build/temp.linux-amd64-3.7/Bio/KDTree/KDTree.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-amd64-3.7/Bio/KDTree/KDTreemodule.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/KDTree/KDTree.o build/temp.linux-amd64-3.7/Bio/KDTree/KDTreemodule.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so building 'Bio.trie' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python3.7m -c Bio/triemodule.c -o build/temp.linux-amd64-3.7/Bio/triemodule.o x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python3.7m -c Bio/trie.c -o build/temp.linux-amd64-3.7/Bio/trie.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biopython-1.73+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/Bio/triemodule.o build/temp.linux-amd64-3.7/Bio/trie.o -o /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.cpython-37m-x86_64-linux-gnu.so cd Doc && make make[2]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc' hevea -fix Tutorial.tex Exclude comment 'comment' ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_introduction.tex:250: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:converting-alignments' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:advanced' ./Tutorial/chapter_quick_start.tex:19: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:35: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:49: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_quick_start.tex:76: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:83: Warning: Undefined label: 'sec:connecting-with-biological-databases' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_quick_start.tex:154: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:162: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:163: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:48: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:131: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seq_annot.tex:133: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:158: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:216: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:229: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:279: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:288: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fastq-conversion' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fasta-qual-conversion' ./Tutorial/chapter_seqio.tex:1154: Warning: Undefined label: 'sec:seq-reverse-complement' ./Tutorial/chapter_seqio.tex:1164: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_seqio.tex:1205: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seqio.tex:1224: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seqio.tex:1303: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_align.tex:31: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:35: Warning: Undefined label: 'sec:AlignIO-count-argument' ./Tutorial/chapter_align.tex:115: Warning: Undefined label: 'sec:alignment-format-method' ./Tutorial/chapter_align.tex:445: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_align.tex:617: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_align.tex:792: Warning: Undefined label: 'sec:SeqRecord-addition' ./Tutorial/chapter_align.tex:844: Warning: Undefined label: 'sec:pairwise2' ./Tutorial/chapter_align.tex:849: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_align.tex:876: Warning: Undefined label: 'seq:emboss-needle-water' ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1023: Warning: Undefined label: 'sec:Phylo' ./Tutorial/chapter_align.tex:1245: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:1550: Warning: Undefined citation: 'durbin1998' ./Tutorial/chapter_align.tex:1562: Warning: Undefined label: 'sec:pairwise-aligner' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-matchscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1645: Warning: Undefined label: 'sec:pairwise-basic' ./Tutorial/chapter_align.tex:1648: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1649: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1855: Warning: Undefined label: 'sec:pairwise-examples' ./Tutorial/chapter_align.tex:1982: Warning: Undefined citation: 'kent2002' ./Tutorial/chapter_blast.tex:18: Warning: Undefined label: 'chapter:searchio' ./Tutorial/chapter_blast.tex:58: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:119: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:124: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:146: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:155: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:164: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:192: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_blast.tex:236: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_blast.tex:282: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:284: Warning: Undefined label: 'sec:running-local-blast' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_blast.tex:445: Warning: Undefined label: 'fig:blastrecord' ./Tutorial/chapter_blast.tex:461: Warning: Undefined label: 'fig:psiblastrecord' ./Tutorial/chapter_searchio.tex:734: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_searchio.tex:1082: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_entrez.tex:22: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:57: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:60: Warning: Undefined label: 'sec:BioSQL' ./Tutorial/chapter_entrez.tex:209: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:213: Warning: Undefined label: 'sec:entrez-einfo' ./Tutorial/chapter_entrez.tex:227: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:289: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:408: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:467: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:469: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:550: Warning: Undefined label: 'sec:elink-citations' ./Tutorial/chapter_entrez.tex:556: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:884: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1042: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1083: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1128: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1180: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1215: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1222: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:1223: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1275: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:1299: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_entrez.tex:1300: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1358: Warning: Undefined label: 'sec:entrez-search-fetch-genbank' ./Tutorial/chapter_entrez.tex:1389: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:1487: Warning: Undefined label: 'subsec:entrez-and-medline' ./Tutorial/chapter_entrez.tex:1492: Warning: Undefined label: 'sec:elink' ./Tutorial/chapter_entrez.tex:1516: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:10: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:41: Warning: Undefined label: 'subsec:expasy_swissprot' ./Tutorial/chapter_uniprot.tex:49: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:347: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_pdb.tex:18: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:207: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:216: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:353: Warning: Undefined label: 'hetero problems' ./Tutorial/chapter_pdb.tex:398: Warning: Undefined label: 'point mutations' ./Tutorial/chapter_pdb.tex:415: Warning: Undefined label: 'disordered atoms' ./Tutorial/chapter_pdb.tex:540: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:586: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:870: Warning: Undefined citation: 'golub1989' ./Tutorial/chapter_pdb.tex:898: Warning: Undefined citation: 'hamelryck2005' ./Tutorial/chapter_pdb.tex:933: Warning: Undefined label: 'cap:DSSP-codes' ./Tutorial/chapter_pdb.tex:972: Warning: Undefined label: 'subsec:residue_depth' ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1022: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_pdb.tex:1234: Warning: Undefined citation: 'hamelryck2003b' ./Tutorial/chapter_pdb.tex:1235: Warning: Undefined citation: 'majumdar2005' ./Tutorial/chapter_phylo.tex:9: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_phylo.tex:96: Warning: Undefined label: 'fig:phylo-simple-draw' ./Tutorial/chapter_phylo.tex:192: Warning: Undefined label: 'fig:phylo-color-draw' ./Tutorial/chapter_phylo.tex:376: Warning: Undefined label: 'fig:phylo-dot' ./Tutorial/chapter_phylo.tex:412: Warning: Undefined label: 'fig:phylo-rooted' ./Tutorial/chapter_phylo.tex:428: Warning: Undefined label: 'fig:phylo-color' ./Tutorial/chapter_phylo.tex:832: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_phylo.tex:903: Warning: Undefined label: 'sec:PhyloXML' ./Tutorial/chapter_motifs.tex:7: Warning: Undefined label: 'sec:links' ./Tutorial/chapter_motifs.tex:152: Warning: Undefined citation: 'cornish1985' ./Tutorial/chapter_motifs.tex:153: Warning: Undefined citation: 'cavener1987' ./Tutorial/chapter_motifs.tex:522: Warning: Undefined citation: 'bailey1994' ./Tutorial/chapter_motifs.tex:658: Warning: Undefined citation: 'matys2003' ./Tutorial/chapter_motifs.tex:733: Warning: Undefined label: 'table:transfaccodes' ./Tutorial/chapter_cluster.tex:5: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'lecuyer1988' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'kachitvichyanukul1988' ./Tutorial/chapter_cluster.tex:153: Warning: Undefined citation: 'snedecor1989' ./Tutorial/chapter_cluster.tex:182: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:263: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:331: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:546: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'kohonen1997' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'tamayo1999' ./Tutorial/chapter_cluster.tex:641: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:654: Warning: Undefined citation: 'yeung2001' ./Tutorial/chapter_cluster.tex:662: Warning: Undefined citation: 'golub1971' ./Tutorial/chapter_cluster.tex:803: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:806: Warning: Undefined label: 'subsec:distancematrix' ./Tutorial/chapter_cluster.tex:824: Warning: Undefined label: 'subsec:clustercentroids' ./Tutorial/chapter_cluster.tex:847: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:872: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:901: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:923: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:955: Warning: Undefined citation: 'hihara2001' ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:74: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:284: Warning: Undefined label: 'sec:LogisticRegression' ./Tutorial/chapter_learning.tex:288: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:296: Warning: Undefined label: 'subsec:LogisticRegressionTraining' ./Tutorial/chapter_graphics.tex:18: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_graphics.tex:28: Warning: Undefined citation: 'toth2006' ./Tutorial/chapter_graphics.tex:31: Warning: Undefined citation: 'vanderauwera2009' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:64: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:206: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:320: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:467: Warning: Undefined label: 'sec:gd_top_down' ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:562: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:571: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_graphics.tex:574: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_graphics.tex:576: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:678: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:919: Warning: Undefined citation: 'jupe2012' ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:22: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:58: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:146: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_cookbook.tex:192: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:197: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_cookbook.tex:317: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_cookbook.tex:415: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:429: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:449: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_cookbook.tex:597: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:600: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_cookbook.tex:750: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:772: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:774: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_cookbook.tex:788: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:855: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:967: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_cookbook.tex:984: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:1343: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1350: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1360: Warning: Undefined label: 'sec:consensus' ./Tutorial/chapter_cookbook.tex:1361: Warning: Undefined label: 'sec:pssm' ./Tutorial/chapter_cookbook.tex:1362: Warning: Undefined label: 'sec:getting_info_content' ./Tutorial/chapter_cookbook.tex:1363: Warning: Undefined label: 'sec:sub_matrix' ./Tutorial/chapter_cookbook.tex:1369: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1497: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1516: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1701: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:49: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:409: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_advanced.tex:163: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:31: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:84: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_contributing.tex:100: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_appendix.tex:88: Warning: Undefined label: 'sec:SeqIO_compressed' HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode Fixpoint reached in 3 step(s) hevea -fix -text Tutorial.tex Exclude comment 'comment' ./Tutorial.tex:68: Warning: tt_mode is an empty style ./Tutorial.tex:95: Warning: Application of '\'' on 'n' failed ./Tutorial.htoc:359: Warning: Application of '\"' on 'i' failed ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:88: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:123: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:394: Warning: Command not found: \downarrow ./Tutorial/chapter_seq_annot.tex:121: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:140: Warning: line too long ./Tutorial/chapter_seq_annot.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:222: Warning: line too long ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:534: Warning: line too long ./Tutorial/chapter_seq_annot.tex:543: Warning: line too long ./Tutorial/chapter_seq_annot.tex:657: Warning: line too long ./Tutorial/chapter_seq_annot.tex:699: Warning: line too long ./Tutorial/chapter_seq_annot.tex:758: Warning: line too long ./Tutorial/chapter_seq_annot.tex:926: Warning: line too long ./Tutorial/chapter_seq_annot.tex:956: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:148: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:195: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:241: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:771: Warning: line too long ./Tutorial/chapter_seqio.tex:1009: Warning: line too long ./Tutorial/chapter_seqio.tex:1016: Warning: line too long ./Tutorial/chapter_seqio.tex:1021: Warning: line too long ./Tutorial/chapter_seqio.tex:1106: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1458: Warning: line too long ./Tutorial/chapter_align.tex:1459: Warning: line too long ./Tutorial/chapter_align.tex:1460: Warning: line too long ./Tutorial/chapter_align.tex:1812: Warning: overfull line in array : array too wide ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1986: Warning: line too long ./Tutorial/chapter_align.tex:2035: Warning: line too long ./Tutorial/chapter_align.tex:2036: Warning: line too long ./Tutorial/chapter_align.tex:2037: Warning: line too long ./Tutorial/chapter_align.tex:2070: Warning: line too long ./Tutorial/chapter_align.tex:2072: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_blast.tex:433: Warning: line too long ./Tutorial/chapter_blast.tex:435: Warning: line too long ./Tutorial/chapter_blast.tex:449: Warning: Image in text ./Tutorial/chapter_blast.tex:465: Warning: Image in text ./Tutorial/chapter_searchio.tex:1: Warning: line too long ./Tutorial/chapter_searchio.tex:29: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:31: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:696: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:728: Warning: line too long ./Tutorial/chapter_searchio.tex:730: Warning: line too long ./Tutorial/chapter_searchio.tex:883: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:961: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:930: Warning: line too long ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:1: Warning: line too long ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:29: Warning: line too long ./Tutorial/chapter_uniprot.tex:38: Warning: line too long ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:495: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1: Warning: line too long ./Tutorial/chapter_pdb.tex:220: Warning: Image in text ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_phylo.tex:104: Warning: Image in text ./Tutorial/chapter_phylo.tex:199: Warning: Image in text ./Tutorial/chapter_phylo.tex:345: Warning: line too long ./Tutorial/chapter_phylo.tex:359: Warning: Image in text ./Tutorial/chapter_phylo.tex:387: Warning: Image in text ./Tutorial/chapter_phylo.tex:421: Warning: Image in text ./Tutorial/chapter_phylo.tex:454: Warning: Image in text ./Tutorial/chapter_phylo.tex:471: Warning: Image in text ./Tutorial/chapter_phylo.tex:473: Warning: Image in text ./Tutorial/chapter_motifs.tex:1: Warning: line too long ./Tutorial/chapter_motifs.tex:530: Warning: line too long ./Tutorial/chapter_motifs.tex:532: Warning: line too long ./Tutorial/chapter_motifs.tex:538: Warning: line too long ./Tutorial/chapter_motifs.tex:540: Warning: line too long ./Tutorial/chapter_motifs.tex:549: Warning: line too long ./Tutorial/chapter_motifs.tex:553: Warning: line too long ./Tutorial/chapter_motifs.tex:555: Warning: line too long ./Tutorial/chapter_motifs.tex:564: Warning: line too long ./Tutorial/chapter_motifs.tex:566: Warning: line too long ./Tutorial/chapter_motifs.tex:567: Warning: line too long ./Tutorial/chapter_motifs.tex:569: Warning: line too long ./Tutorial/chapter_motifs.tex:1496: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1498: Warning: '_' occurring outside math mode ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:601: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:605: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:610: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:706: Warning: line too long ./Tutorial/chapter_cluster.tex:714: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: overfull line in array : array too wide ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:69: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:406: Warning: Application of '\"' on 'i' failed ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:68: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:125: Warning: Image in text ./Tutorial/chapter_graphics.tex:125: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:150: Warning: Image in text ./Tutorial/chapter_graphics.tex:150: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: Image in text ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:371: Warning: Image in text ./Tutorial/chapter_graphics.tex:371: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: Image in text ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: Image in text ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:530: Warning: Image in text ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: Image in text ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:647: Warning: Image in text ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: Image in text ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: Image in text ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:942: Warning: line too long ./Tutorial/chapter_graphics.tex:1012: Warning: Image in text ./Tutorial/chapter_graphics.tex:1012: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:1027: Warning: line too long ./Tutorial/chapter_graphics.tex:1089: Warning: Image in text ./Tutorial/chapter_graphics.tex:1089: Warning: '_' occurring outside math mode ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_phenotype.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:16: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:32: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:103: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:424: Warning: line too long ./Tutorial/chapter_cookbook.tex:519: Warning: line too long ./Tutorial/chapter_cookbook.tex:753: Warning: line too long ./Tutorial/chapter_cookbook.tex:854: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:996: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1034: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1034: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1067: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1098: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1098: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1146: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1194: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1194: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1290: Warning: line too long ./Tutorial/chapter_cookbook.tex:1291: Warning: line too long ./Tutorial/chapter_cookbook.tex:1337: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1696: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:349: Warning: line too long ./Tutorial/chapter_testing.tex:402: Warning: line too long ./Tutorial/chapter_testing.tex:494: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:502: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:508: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:514: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_advanced.tex:190: Warning: line too long ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:79: Warning: '_' occurring outside math mode ./Tutorial.tex:122: Warning: line too long ./Tutorial.tex:133: Warning: Application of '\'' on 'e' failed ./Tutorial.tex:133: Warning: Application of '\'' on 'o' failed ./Tutorial.tex:137: Warning: Application of '\"' on 'u' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'o' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'u' failed HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial.tex:68: Warning: tt_mode is an empty style ./Tutorial.haux:527: Giving up command: \@hevea@cbrace ./Tutorial.tex:68: Giving up command: \input ./Tutorial.tex:68: Warning: Failure while reading .haux ./Tutorial.tex:95: Warning: Application of '\'' on 'n' failed ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_introduction.tex:250: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:converting-alignments' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:advanced' ./Tutorial/chapter_quick_start.tex:19: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:35: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:49: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_quick_start.tex:76: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:83: Warning: Undefined label: 'sec:connecting-with-biological-databases' ./Tutorial/chapter_quick_start.tex:88: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:123: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_quick_start.tex:154: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:162: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:163: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:394: Warning: Command not found: \downarrow ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:48: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:121: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:131: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seq_annot.tex:133: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:140: Warning: line too long ./Tutorial/chapter_seq_annot.tex:158: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:216: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:222: Warning: line too long ./Tutorial/chapter_seq_annot.tex:229: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:279: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:288: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:534: Warning: line too long ./Tutorial/chapter_seq_annot.tex:543: Warning: line too long ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:657: Warning: line too long ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:699: Warning: line too long ./Tutorial/chapter_seq_annot.tex:758: Warning: line too long ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:926: Warning: line too long ./Tutorial/chapter_seq_annot.tex:956: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:148: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:195: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:241: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:771: Warning: line too long ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1009: Warning: line too long ./Tutorial/chapter_seqio.tex:1016: Warning: line too long ./Tutorial/chapter_seqio.tex:1021: Warning: line too long ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1106: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fastq-conversion' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fasta-qual-conversion' ./Tutorial/chapter_seqio.tex:1154: Warning: Undefined label: 'sec:seq-reverse-complement' ./Tutorial/chapter_seqio.tex:1164: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_seqio.tex:1205: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seqio.tex:1224: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seqio.tex:1303: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:31: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:35: Warning: Undefined label: 'sec:AlignIO-count-argument' ./Tutorial/chapter_align.tex:115: Warning: Undefined label: 'sec:alignment-format-method' ./Tutorial/chapter_align.tex:445: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_align.tex:617: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_align.tex:792: Warning: Undefined label: 'sec:SeqRecord-addition' ./Tutorial/chapter_align.tex:844: Warning: Undefined label: 'sec:pairwise2' ./Tutorial/chapter_align.tex:849: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_align.tex:876: Warning: Undefined label: 'seq:emboss-needle-water' ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1023: Warning: Undefined label: 'sec:Phylo' ./Tutorial/chapter_align.tex:1245: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:1458: Warning: line too long ./Tutorial/chapter_align.tex:1459: Warning: line too long ./Tutorial/chapter_align.tex:1460: Warning: line too long ./Tutorial/chapter_align.tex:1550: Warning: Undefined citation: 'durbin1998' ./Tutorial/chapter_align.tex:1562: Warning: Undefined label: 'sec:pairwise-aligner' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-matchscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1645: Warning: Undefined label: 'sec:pairwise-basic' ./Tutorial/chapter_align.tex:1648: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1649: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1812: Warning: overfull line in array : array too wide ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1855: Warning: Undefined label: 'sec:pairwise-examples' ./Tutorial/chapter_align.tex:1982: Warning: Undefined citation: 'kent2002' ./Tutorial/chapter_align.tex:1986: Warning: line too long ./Tutorial/chapter_align.tex:2035: Warning: line too long ./Tutorial/chapter_align.tex:2036: Warning: line too long ./Tutorial/chapter_align.tex:2037: Warning: line too long ./Tutorial/chapter_align.tex:2070: Warning: line too long ./Tutorial/chapter_align.tex:2072: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:18: Warning: Undefined label: 'chapter:searchio' ./Tutorial/chapter_blast.tex:58: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:119: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:124: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:146: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:155: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:164: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:192: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_blast.tex:236: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_blast.tex:282: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:284: Warning: Undefined label: 'sec:running-local-blast' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_blast.tex:433: Warning: line too long ./Tutorial/chapter_blast.tex:435: Warning: line too long ./Tutorial/chapter_blast.tex:445: Warning: Undefined label: 'fig:blastrecord' ./Tutorial/chapter_blast.tex:449: Warning: Image in text ./Tutorial/chapter_blast.tex:461: Warning: Undefined label: 'fig:psiblastrecord' ./Tutorial/chapter_blast.tex:465: Warning: Image in text ./Tutorial/chapter_searchio.tex:1: Warning: line too long ./Tutorial/chapter_searchio.tex:29: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:31: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:696: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:728: Warning: line too long ./Tutorial/chapter_searchio.tex:730: Warning: line too long ./Tutorial/chapter_searchio.tex:734: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_searchio.tex:883: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:961: Warning: line too long ./Tutorial/chapter_searchio.tex:1082: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:22: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:57: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:60: Warning: Undefined label: 'sec:BioSQL' ./Tutorial/chapter_entrez.tex:209: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:213: Warning: Undefined label: 'sec:entrez-einfo' ./Tutorial/chapter_entrez.tex:227: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:289: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:408: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:467: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:469: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:550: Warning: Undefined label: 'sec:elink-citations' ./Tutorial/chapter_entrez.tex:556: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:884: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:930: Warning: line too long ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1042: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1083: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1128: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1180: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1215: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1222: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:1223: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1275: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:1299: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_entrez.tex:1300: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1358: Warning: Undefined label: 'sec:entrez-search-fetch-genbank' ./Tutorial/chapter_entrez.tex:1389: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:1487: Warning: Undefined label: 'subsec:entrez-and-medline' ./Tutorial/chapter_entrez.tex:1492: Warning: Undefined label: 'sec:elink' ./Tutorial/chapter_entrez.tex:1516: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_uniprot.tex:1: Warning: line too long ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:10: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:29: Warning: line too long ./Tutorial/chapter_uniprot.tex:38: Warning: line too long ./Tutorial/chapter_uniprot.tex:41: Warning: Undefined label: 'subsec:expasy_swissprot' ./Tutorial/chapter_uniprot.tex:49: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:347: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:495: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1: Warning: line too long ./Tutorial/chapter_pdb.tex:18: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:207: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:216: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:220: Warning: Image in text ./Tutorial/chapter_pdb.tex:353: Warning: Undefined label: 'hetero problems' ./Tutorial/chapter_pdb.tex:398: Warning: Undefined label: 'point mutations' ./Tutorial/chapter_pdb.tex:415: Warning: Undefined label: 'disordered atoms' ./Tutorial/chapter_pdb.tex:540: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:586: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:870: Warning: Undefined citation: 'golub1989' ./Tutorial/chapter_pdb.tex:898: Warning: Undefined citation: 'hamelryck2005' ./Tutorial/chapter_pdb.tex:933: Warning: Undefined label: 'cap:DSSP-codes' ./Tutorial/chapter_pdb.tex:972: Warning: Undefined label: 'subsec:residue_depth' ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1022: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_pdb.tex:1234: Warning: Undefined citation: 'hamelryck2003b' ./Tutorial/chapter_pdb.tex:1235: Warning: Undefined citation: 'majumdar2005' ./Tutorial/chapter_phylo.tex:9: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_phylo.tex:96: Warning: Undefined label: 'fig:phylo-simple-draw' ./Tutorial/chapter_phylo.tex:104: Warning: Image in text ./Tutorial/chapter_phylo.tex:192: Warning: Undefined label: 'fig:phylo-color-draw' ./Tutorial/chapter_phylo.tex:199: Warning: Image in text ./Tutorial/chapter_phylo.tex:345: Warning: line too long ./Tutorial/chapter_phylo.tex:359: Warning: Image in text ./Tutorial/chapter_phylo.tex:376: Warning: Undefined label: 'fig:phylo-dot' ./Tutorial/chapter_phylo.tex:387: Warning: Image in text ./Tutorial/chapter_phylo.tex:412: Warning: Undefined label: 'fig:phylo-rooted' ./Tutorial/chapter_phylo.tex:421: Warning: Image in text ./Tutorial/chapter_phylo.tex:428: Warning: Undefined label: 'fig:phylo-color' ./Tutorial/chapter_phylo.tex:454: Warning: Image in text ./Tutorial/chapter_phylo.tex:471: Warning: Image in text ./Tutorial/chapter_phylo.tex:473: Warning: Image in text ./Tutorial/chapter_phylo.tex:832: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_phylo.tex:903: Warning: Undefined label: 'sec:PhyloXML' ./Tutorial/chapter_motifs.tex:1: Warning: line too long ./Tutorial/chapter_motifs.tex:7: Warning: Undefined label: 'sec:links' ./Tutorial/chapter_motifs.tex:152: Warning: Undefined citation: 'cornish1985' ./Tutorial/chapter_motifs.tex:153: Warning: Undefined citation: 'cavener1987' ./Tutorial/chapter_motifs.tex:522: Warning: Undefined citation: 'bailey1994' ./Tutorial/chapter_motifs.tex:530: Warning: line too long ./Tutorial/chapter_motifs.tex:532: Warning: line too long ./Tutorial/chapter_motifs.tex:538: Warning: line too long ./Tutorial/chapter_motifs.tex:540: Warning: line too long ./Tutorial/chapter_motifs.tex:549: Warning: line too long ./Tutorial/chapter_motifs.tex:553: Warning: line too long ./Tutorial/chapter_motifs.tex:555: Warning: line too long ./Tutorial/chapter_motifs.tex:564: Warning: line too long ./Tutorial/chapter_motifs.tex:566: Warning: line too long ./Tutorial/chapter_motifs.tex:567: Warning: line too long ./Tutorial/chapter_motifs.tex:569: Warning: line too long ./Tutorial/chapter_motifs.tex:658: Warning: Undefined citation: 'matys2003' ./Tutorial/chapter_motifs.tex:733: Warning: Undefined label: 'table:transfaccodes' ./Tutorial/chapter_motifs.tex:1496: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1498: Warning: '_' occurring outside math mode ./Tutorial/chapter_cluster.tex:5: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'lecuyer1988' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'kachitvichyanukul1988' ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:153: Warning: Undefined citation: 'snedecor1989' ./Tutorial/chapter_cluster.tex:182: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:263: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:331: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:546: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'kohonen1997' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'tamayo1999' ./Tutorial/chapter_cluster.tex:601: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:605: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:610: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:641: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:654: Warning: Undefined citation: 'yeung2001' ./Tutorial/chapter_cluster.tex:662: Warning: Undefined citation: 'golub1971' ./Tutorial/chapter_cluster.tex:706: Warning: line too long ./Tutorial/chapter_cluster.tex:714: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: overfull line in array : array too wide ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:803: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:806: Warning: Undefined label: 'subsec:distancematrix' ./Tutorial/chapter_cluster.tex:824: Warning: Undefined label: 'subsec:clustercentroids' ./Tutorial/chapter_cluster.tex:847: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:872: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:901: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:923: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:955: Warning: Undefined citation: 'hihara2001' ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:69: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:74: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:284: Warning: Undefined label: 'sec:LogisticRegression' ./Tutorial/chapter_learning.tex:288: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:296: Warning: Undefined label: 'subsec:LogisticRegressionTraining' ./Tutorial/chapter_learning.tex:406: Warning: Application of '\"' on 'i' failed ./Tutorial/chapter_graphics.tex:18: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_graphics.tex:28: Warning: Undefined citation: 'toth2006' ./Tutorial/chapter_graphics.tex:31: Warning: Undefined citation: 'vanderauwera2009' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:64: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:68: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:125: Warning: Image in text ./Tutorial/chapter_graphics.tex:125: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:150: Warning: Image in text ./Tutorial/chapter_graphics.tex:150: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:206: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: Image in text ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:320: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:371: Warning: Image in text ./Tutorial/chapter_graphics.tex:371: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: Image in text ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: Image in text ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:467: Warning: Undefined label: 'sec:gd_top_down' ./Tutorial/chapter_graphics.tex:530: Warning: Image in text ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: Image in text ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:562: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:571: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_graphics.tex:574: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_graphics.tex:576: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_graphics.tex:647: Warning: Image in text ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:678: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: Image in text ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: Image in text ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:919: Warning: Undefined citation: 'jupe2012' ./Tutorial/chapter_graphics.tex:942: Warning: line too long ./Tutorial/chapter_graphics.tex:1012: Warning: Image in text ./Tutorial/chapter_graphics.tex:1012: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:1027: Warning: line too long ./Tutorial/chapter_graphics.tex:1089: Warning: Image in text ./Tutorial/chapter_graphics.tex:1089: Warning: '_' occurring outside math mode ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_phenotype.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:16: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:32: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:22: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:58: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:103: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:146: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_cookbook.tex:192: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:197: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_cookbook.tex:317: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_cookbook.tex:415: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:424: Warning: line too long ./Tutorial/chapter_cookbook.tex:429: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:449: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_cookbook.tex:519: Warning: line too long ./Tutorial/chapter_cookbook.tex:597: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:600: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_cookbook.tex:750: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:753: Warning: line too long ./Tutorial/chapter_cookbook.tex:772: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:774: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_cookbook.tex:788: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:854: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:855: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:967: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_cookbook.tex:984: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:996: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1034: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1034: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1067: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1098: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1098: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1146: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1194: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1194: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1290: Warning: line too long ./Tutorial/chapter_cookbook.tex:1291: Warning: line too long ./Tutorial/chapter_cookbook.tex:1337: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1343: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1350: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1360: Warning: Undefined label: 'sec:consensus' ./Tutorial/chapter_cookbook.tex:1361: Warning: Undefined label: 'sec:pssm' ./Tutorial/chapter_cookbook.tex:1362: Warning: Undefined label: 'sec:getting_info_content' ./Tutorial/chapter_cookbook.tex:1363: Warning: Undefined label: 'sec:sub_matrix' ./Tutorial/chapter_cookbook.tex:1369: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1497: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1516: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1696: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1701: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:49: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:349: Warning: line too long ./Tutorial/chapter_testing.tex:402: Warning: line too long ./Tutorial/chapter_testing.tex:409: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:494: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:502: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:508: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:514: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_advanced.tex:163: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_advanced.tex:190: Warning: line too long ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:31: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:79: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:84: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_contributing.tex:100: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_appendix.tex:88: Warning: Undefined label: 'sec:SeqIO_compressed' ./Tutorial.tex:122: Warning: line too long ./Tutorial.tex:133: Warning: Application of '\'' on 'e' failed ./Tutorial.tex:133: Warning: Application of '\'' on 'o' failed ./Tutorial.tex:137: Warning: Application of '\"' on 'u' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'o' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'u' failed HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Tutorial.tex:68: Warning: tt_mode is an empty style ./Tutorial.haux:527: Giving up command: \@hevea@cbrace ./Tutorial.tex:68: Giving up command: \input ./Tutorial.tex:68: Warning: Failure while reading .haux ./Tutorial.tex:95: Warning: Application of '\'' on 'n' failed ./Tutorial/chapter_introduction.tex:110: Warning: Undefined citation: 'cock2009' ./Tutorial/chapter_introduction.tex:114: Warning: Undefined citation: 'chapman2000' ./Tutorial/chapter_introduction.tex:115: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_introduction.tex:116: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_introduction.tex:117: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_introduction.tex:118: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_introduction.tex:119: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_introduction.tex:237: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_introduction.tex:250: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_introduction.tex:292: Warning: Undefined label: 'sec:converting-alignments' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:14: Warning: Undefined label: 'chapter:advanced' ./Tutorial/chapter_quick_start.tex:19: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:35: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_quick_start.tex:49: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:69: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_quick_start.tex:76: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:78: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:83: Warning: Undefined label: 'sec:connecting-with-biological-databases' ./Tutorial/chapter_quick_start.tex:88: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:123: Warning: '_' occurring outside math mode ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_quick_start.tex:149: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_quick_start.tex:154: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_quick_start.tex:162: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_quick_start.tex:163: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_quick_start.tex:173: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:1: Warning: line too long ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seq_objects.tex:5: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:137: Warning: Undefined label: 'sec:mutable-seq' ./Tutorial/chapter_seq_objects.tex:207: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_objects.tex:209: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_objects.tex:376: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_seq_objects.tex:394: Warning: Command not found: \downarrow ./Tutorial/chapter_seq_objects.tex:449: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:564: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seq_objects.tex:570: Warning: Undefined label: 'sec:seq-module-functions' ./Tutorial/chapter_seq_objects.tex:719: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:810: Warning: Undefined label: 'sec:seq-to-string' ./Tutorial/chapter_seq_objects.tex:871: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:4: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seq_annot.tex:21: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:34: Warning: Undefined label: 'sec:FASTQ-filtering-example' ./Tutorial/chapter_seq_annot.tex:38: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:48: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:121: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:131: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seq_annot.tex:133: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:140: Warning: line too long ./Tutorial/chapter_seq_annot.tex:158: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:216: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:222: Warning: line too long ./Tutorial/chapter_seq_annot.tex:229: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:279: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_seq_annot.tex:282: Warning: '_' occurring outside math mode ./Tutorial/chapter_seq_annot.tex:288: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:296: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:528: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:534: Warning: line too long ./Tutorial/chapter_seq_annot.tex:543: Warning: line too long ./Tutorial/chapter_seq_annot.tex:632: Warning: Undefined label: 'sec:seq-comparison' ./Tutorial/chapter_seq_annot.tex:640: Warning: Undefined label: 'sec:locations' ./Tutorial/chapter_seq_annot.tex:657: Warning: line too long ./Tutorial/chapter_seq_annot.tex:676: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:679: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_seq_annot.tex:699: Warning: line too long ./Tutorial/chapter_seq_annot.tex:758: Warning: line too long ./Tutorial/chapter_seq_annot.tex:833: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seq_annot.tex:841: Warning: Undefined label: 'sec:FASTQ-slicing-off-primer' ./Tutorial/chapter_seq_annot.tex:842: Warning: Undefined label: 'sec:FASTQ-slicing-off-adaptor' ./Tutorial/chapter_seq_annot.tex:855: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_seq_annot.tex:926: Warning: line too long ./Tutorial/chapter_seq_annot.tex:956: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:1: Warning: line too long ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:quick-start' ./Tutorial/chapter_seqio.tex:4: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:13: Warning: Undefined label: 'chapter:Bio.Seq' ./Tutorial/chapter_seqio.tex:15: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:SeqIO_Online' ./Tutorial/chapter_seqio.tex:23: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:45: Warning: Undefined label: 'sec:sequence-parsing' ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:45: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:69: Warning: Undefined label: 'seq:sequence-parsing-plus-pylab' ./Tutorial/chapter_seqio.tex:148: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_seqio.tex:148: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:195: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:241: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:280: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:283: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_seqio.tex:359: Warning: Undefined label: 'sec:SeqIO-index-bgzf' ./Tutorial/chapter_seqio.tex:362: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:374: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:375: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'chapter:entrez' ./Tutorial/chapter_seqio.tex:451: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:454: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:456: Warning: Undefined label: 'chapter:swiss_prot' ./Tutorial/chapter_seqio.tex:491: Warning: Undefined label: 'SeqIO:to_dict' ./Tutorial/chapter_seqio.tex:497: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:501: Warning: Undefined label: 'sec:SeqIO-index-db' ./Tutorial/chapter_seqio.tex:504: Warning: Undefined label: 'sec:SeqIO-indexing-discussion' ./Tutorial/chapter_seqio.tex:507: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:514: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_seqio.tex:588: Warning: Undefined label: 'sec:fasta-parsing' ./Tutorial/chapter_seqio.tex:704: Warning: Undefined label: 'sec:fastq-indexing' ./Tutorial/chapter_seqio.tex:725: Warning: Undefined label: 'seq:seqio-todict-functionkey' ./Tutorial/chapter_seqio.tex:771: Warning: line too long ./Tutorial/chapter_seqio.tex:787: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_seqio.tex:869: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1009: Warning: line too long ./Tutorial/chapter_seqio.tex:1016: Warning: line too long ./Tutorial/chapter_seqio.tex:1021: Warning: line too long ./Tutorial/chapter_seqio.tex:1097: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_seqio.tex:1106: Warning: '_' occurring outside math mode ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fastq-conversion' ./Tutorial/chapter_seqio.tex:1139: Warning: Undefined label: 'sec:SeqIO-fasta-qual-conversion' ./Tutorial/chapter_seqio.tex:1154: Warning: Undefined label: 'sec:seq-reverse-complement' ./Tutorial/chapter_seqio.tex:1164: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_seqio.tex:1205: Warning: Undefined label: 'sec:SeqIO-translate' ./Tutorial/chapter_seqio.tex:1224: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_seqio.tex:1303: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:1: Warning: line too long ./Tutorial/chapter_align.tex:31: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:35: Warning: Undefined label: 'sec:AlignIO-count-argument' ./Tutorial/chapter_align.tex:115: Warning: Undefined label: 'sec:alignment-format-method' ./Tutorial/chapter_align.tex:445: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_align.tex:617: Warning: Undefined label: 'sec:SeqRecord-format' ./Tutorial/chapter_align.tex:792: Warning: Undefined label: 'sec:SeqRecord-addition' ./Tutorial/chapter_align.tex:844: Warning: Undefined label: 'sec:pairwise2' ./Tutorial/chapter_align.tex:849: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_align.tex:876: Warning: Undefined label: 'seq:emboss-needle-water' ./Tutorial/chapter_align.tex:884: Warning: '_' occurring outside math mode ./Tutorial/chapter_align.tex:1023: Warning: Undefined label: 'sec:Phylo' ./Tutorial/chapter_align.tex:1245: Warning: Undefined label: 'sec:appendix-handles' ./Tutorial/chapter_align.tex:1458: Warning: line too long ./Tutorial/chapter_align.tex:1459: Warning: line too long ./Tutorial/chapter_align.tex:1460: Warning: line too long ./Tutorial/chapter_align.tex:1550: Warning: Undefined citation: 'durbin1998' ./Tutorial/chapter_align.tex:1562: Warning: Undefined label: 'sec:pairwise-aligner' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-matchscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1644: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1645: Warning: Undefined label: 'sec:pairwise-basic' ./Tutorial/chapter_align.tex:1648: Warning: Undefined label: 'sec:pairwise-affine-gapscores' ./Tutorial/chapter_align.tex:1649: Warning: Undefined label: 'sec:pairwise-general-gapscores' ./Tutorial/chapter_align.tex:1812: Warning: overfull line in array : array too wide ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1812: Warning: line too long ./Tutorial/chapter_align.tex:1855: Warning: Undefined label: 'sec:pairwise-examples' ./Tutorial/chapter_align.tex:1982: Warning: Undefined citation: 'kent2002' ./Tutorial/chapter_align.tex:1986: Warning: line too long ./Tutorial/chapter_align.tex:2035: Warning: line too long ./Tutorial/chapter_align.tex:2036: Warning: line too long ./Tutorial/chapter_align.tex:2037: Warning: line too long ./Tutorial/chapter_align.tex:2070: Warning: line too long ./Tutorial/chapter_align.tex:2072: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:1: Warning: line too long ./Tutorial/chapter_blast.tex:18: Warning: Undefined label: 'chapter:searchio' ./Tutorial/chapter_blast.tex:58: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:119: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:124: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:146: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:155: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:164: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:188: Warning: '_' occurring outside math mode ./Tutorial/chapter_blast.tex:192: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_blast.tex:236: Warning: Undefined label: 'sec:parsing-blast' ./Tutorial/chapter_blast.tex:268: Warning: Undefined label: 'sec:parsing-blast-deprecated' ./Tutorial/chapter_blast.tex:282: Warning: Undefined label: 'sec:running-www-blast' ./Tutorial/chapter_blast.tex:284: Warning: Undefined label: 'sec:running-local-blast' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_blast.tex:335: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_blast.tex:433: Warning: line too long ./Tutorial/chapter_blast.tex:435: Warning: line too long ./Tutorial/chapter_blast.tex:445: Warning: Undefined label: 'fig:blastrecord' ./Tutorial/chapter_blast.tex:449: Warning: Image in text ./Tutorial/chapter_blast.tex:461: Warning: Undefined label: 'fig:psiblastrecord' ./Tutorial/chapter_blast.tex:465: Warning: Image in text ./Tutorial/chapter_searchio.tex:1: Warning: line too long ./Tutorial/chapter_searchio.tex:29: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:31: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:696: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:728: Warning: line too long ./Tutorial/chapter_searchio.tex:730: Warning: line too long ./Tutorial/chapter_searchio.tex:734: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_searchio.tex:883: Warning: '_' occurring outside math mode ./Tutorial/chapter_searchio.tex:961: Warning: line too long ./Tutorial/chapter_searchio.tex:1082: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:1: Warning: line too long ./Tutorial/chapter_entrez.tex:22: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:57: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:60: Warning: Undefined label: 'sec:BioSQL' ./Tutorial/chapter_entrez.tex:209: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:213: Warning: Undefined label: 'sec:entrez-einfo' ./Tutorial/chapter_entrez.tex:227: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:289: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:314: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:408: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:467: Warning: Undefined label: 'sec:entrez-specialized-parsers' ./Tutorial/chapter_entrez.tex:469: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:550: Warning: Undefined label: 'sec:elink-citations' ./Tutorial/chapter_entrez.tex:556: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:767: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_entrez.tex:884: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:930: Warning: line too long ./Tutorial/chapter_entrez.tex:1035: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1038: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1042: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1083: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1126: Warning: '_' occurring outside math mode ./Tutorial/chapter_entrez.tex:1128: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_entrez.tex:1180: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1215: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1222: Warning: Undefined label: 'sec:SeqIO_GenBank_Online' ./Tutorial/chapter_entrez.tex:1223: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1275: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_entrez.tex:1299: Warning: Undefined label: 'sec:entrez-guidelines' ./Tutorial/chapter_entrez.tex:1300: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_entrez.tex:1358: Warning: Undefined label: 'sec:entrez-search-fetch-genbank' ./Tutorial/chapter_entrez.tex:1389: Warning: Undefined label: 'subsec:entrez_example_genbank' ./Tutorial/chapter_entrez.tex:1487: Warning: Undefined label: 'subsec:entrez-and-medline' ./Tutorial/chapter_entrez.tex:1492: Warning: Undefined label: 'sec:elink' ./Tutorial/chapter_entrez.tex:1516: Warning: Undefined label: 'sec:entrez-webenv' ./Tutorial/chapter_uniprot.tex:1: Warning: line too long ./Tutorial/chapter_uniprot.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:10: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:29: Warning: line too long ./Tutorial/chapter_uniprot.tex:38: Warning: line too long ./Tutorial/chapter_uniprot.tex:41: Warning: Undefined label: 'subsec:expasy_swissprot' ./Tutorial/chapter_uniprot.tex:49: Warning: Undefined label: 'sec:SeqIO_ExPASy_and_SwissProt' ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:84: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:345: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:347: Warning: Undefined label: 'sec:orchids' ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:446: Warning: '_' occurring outside math mode ./Tutorial/chapter_uniprot.tex:495: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1: Warning: line too long ./Tutorial/chapter_pdb.tex:18: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:207: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:216: Warning: Undefined label: 'problem structures' ./Tutorial/chapter_pdb.tex:220: Warning: Image in text ./Tutorial/chapter_pdb.tex:353: Warning: Undefined label: 'hetero problems' ./Tutorial/chapter_pdb.tex:398: Warning: Undefined label: 'point mutations' ./Tutorial/chapter_pdb.tex:415: Warning: Undefined label: 'disordered atoms' ./Tutorial/chapter_pdb.tex:540: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:586: Warning: Undefined label: 'fig:smcra' ./Tutorial/chapter_pdb.tex:769: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:870: Warning: Undefined citation: 'golub1989' ./Tutorial/chapter_pdb.tex:898: Warning: Undefined citation: 'hamelryck2005' ./Tutorial/chapter_pdb.tex:933: Warning: Undefined label: 'cap:DSSP-codes' ./Tutorial/chapter_pdb.tex:972: Warning: Undefined label: 'subsec:residue_depth' ./Tutorial/chapter_pdb.tex:974: Warning: '_' occurring outside math mode ./Tutorial/chapter_pdb.tex:1022: Warning: Undefined citation: 'hamelryck2003a' ./Tutorial/chapter_pdb.tex:1234: Warning: Undefined citation: 'hamelryck2003b' ./Tutorial/chapter_pdb.tex:1235: Warning: Undefined citation: 'majumdar2005' ./Tutorial/chapter_phylo.tex:9: Warning: Undefined citation: 'talevich2012' ./Tutorial/chapter_phylo.tex:96: Warning: Undefined label: 'fig:phylo-simple-draw' ./Tutorial/chapter_phylo.tex:104: Warning: Image in text ./Tutorial/chapter_phylo.tex:192: Warning: Undefined label: 'fig:phylo-color-draw' ./Tutorial/chapter_phylo.tex:199: Warning: Image in text ./Tutorial/chapter_phylo.tex:345: Warning: line too long ./Tutorial/chapter_phylo.tex:359: Warning: Image in text ./Tutorial/chapter_phylo.tex:376: Warning: Undefined label: 'fig:phylo-dot' ./Tutorial/chapter_phylo.tex:387: Warning: Image in text ./Tutorial/chapter_phylo.tex:412: Warning: Undefined label: 'fig:phylo-rooted' ./Tutorial/chapter_phylo.tex:421: Warning: Image in text ./Tutorial/chapter_phylo.tex:428: Warning: Undefined label: 'fig:phylo-color' ./Tutorial/chapter_phylo.tex:454: Warning: Image in text ./Tutorial/chapter_phylo.tex:471: Warning: Image in text ./Tutorial/chapter_phylo.tex:473: Warning: Image in text ./Tutorial/chapter_phylo.tex:832: Warning: Undefined label: 'sec:alignment-tools' ./Tutorial/chapter_phylo.tex:903: Warning: Undefined label: 'sec:PhyloXML' ./Tutorial/chapter_motifs.tex:1: Warning: line too long ./Tutorial/chapter_motifs.tex:7: Warning: Undefined label: 'sec:links' ./Tutorial/chapter_motifs.tex:152: Warning: Undefined citation: 'cornish1985' ./Tutorial/chapter_motifs.tex:153: Warning: Undefined citation: 'cavener1987' ./Tutorial/chapter_motifs.tex:522: Warning: Undefined citation: 'bailey1994' ./Tutorial/chapter_motifs.tex:530: Warning: line too long ./Tutorial/chapter_motifs.tex:532: Warning: line too long ./Tutorial/chapter_motifs.tex:538: Warning: line too long ./Tutorial/chapter_motifs.tex:540: Warning: line too long ./Tutorial/chapter_motifs.tex:549: Warning: line too long ./Tutorial/chapter_motifs.tex:553: Warning: line too long ./Tutorial/chapter_motifs.tex:555: Warning: line too long ./Tutorial/chapter_motifs.tex:564: Warning: line too long ./Tutorial/chapter_motifs.tex:566: Warning: line too long ./Tutorial/chapter_motifs.tex:567: Warning: line too long ./Tutorial/chapter_motifs.tex:569: Warning: line too long ./Tutorial/chapter_motifs.tex:658: Warning: Undefined citation: 'matys2003' ./Tutorial/chapter_motifs.tex:733: Warning: Undefined label: 'table:transfaccodes' ./Tutorial/chapter_motifs.tex:1496: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1497: Warning: '_' occurring outside math mode ./Tutorial/chapter_motifs.tex:1498: Warning: '_' occurring outside math mode ./Tutorial/chapter_cluster.tex:5: Warning: Undefined citation: 'dehoon2004' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'lecuyer1988' ./Tutorial/chapter_cluster.tex:29: Warning: Undefined citation: 'kachitvichyanukul1988' ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:83: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:85: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'x' failed ./Tutorial/chapter_cluster.tex:116: Warning: Application of '\=' on 'y' failed ./Tutorial/chapter_cluster.tex:153: Warning: Undefined citation: 'snedecor1989' ./Tutorial/chapter_cluster.tex:182: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:263: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:331: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:546: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'kohonen1997' ./Tutorial/chapter_cluster.tex:594: Warning: Undefined citation: 'tamayo1999' ./Tutorial/chapter_cluster.tex:601: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:605: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:610: Warning: Cannot output that numerical entity: U+00B7 ./Tutorial/chapter_cluster.tex:641: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:654: Warning: Undefined citation: 'yeung2001' ./Tutorial/chapter_cluster.tex:662: Warning: Undefined citation: 'golub1971' ./Tutorial/chapter_cluster.tex:706: Warning: line too long ./Tutorial/chapter_cluster.tex:714: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: overfull line in array : array too wide ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:750: Warning: line too long ./Tutorial/chapter_cluster.tex:803: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:806: Warning: Undefined label: 'subsec:distancematrix' ./Tutorial/chapter_cluster.tex:824: Warning: Undefined label: 'subsec:clustercentroids' ./Tutorial/chapter_cluster.tex:847: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:872: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:901: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:923: Warning: Undefined label: 'sec:distancefunctions' ./Tutorial/chapter_cluster.tex:955: Warning: Undefined citation: 'hihara2001' ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:38: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:39: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:69: Warning: overfull line in array : array too wide ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:69: Warning: line too long ./Tutorial/chapter_learning.tex:74: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:210: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:272: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:OP' ./Tutorial/chapter_learning.tex:274: Warning: Undefined label: 'eq:NOP' ./Tutorial/chapter_learning.tex:284: Warning: Undefined label: 'sec:LogisticRegression' ./Tutorial/chapter_learning.tex:288: Warning: Undefined label: 'table:training' ./Tutorial/chapter_learning.tex:296: Warning: Undefined label: 'subsec:LogisticRegressionTraining' ./Tutorial/chapter_learning.tex:406: Warning: Application of '\"' on 'i' failed ./Tutorial/chapter_graphics.tex:18: Warning: Undefined citation: 'pritchard2006' ./Tutorial/chapter_graphics.tex:28: Warning: Undefined citation: 'toth2006' ./Tutorial/chapter_graphics.tex:31: Warning: Undefined citation: 'vanderauwera2009' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:SeqRecord' ./Tutorial/chapter_graphics.tex:36: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:61: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:64: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_graphics.tex:68: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:125: Warning: Image in text ./Tutorial/chapter_graphics.tex:125: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:150: Warning: Image in text ./Tutorial/chapter_graphics.tex:150: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:203: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:206: Warning: Undefined label: 'sec:seq_features' ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:254: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: Image in text ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:300: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:301: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:320: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_graphics.tex:327: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:371: Warning: Image in text ./Tutorial/chapter_graphics.tex:371: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:384: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: Image in text ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:406: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: Image in text ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:438: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:464: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:467: Warning: Undefined label: 'sec:gd_top_down' ./Tutorial/chapter_graphics.tex:530: Warning: Image in text ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:530: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: Image in text ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:532: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:557: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:562: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:571: Warning: Undefined label: 'sec:efetch' ./Tutorial/chapter_graphics.tex:574: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_graphics.tex:576: Warning: Undefined label: 'sec:SeqRecord-reverse-complement' ./Tutorial/chapter_graphics.tex:647: Warning: Image in text ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:647: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:671: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:678: Warning: Undefined citation: 'proux2002' ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:762: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: Image in text ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:801: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:828: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: Image in text ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:834: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:919: Warning: Undefined citation: 'jupe2012' ./Tutorial/chapter_graphics.tex:942: Warning: line too long ./Tutorial/chapter_graphics.tex:1012: Warning: Image in text ./Tutorial/chapter_graphics.tex:1012: Warning: '_' occurring outside math mode ./Tutorial/chapter_graphics.tex:1027: Warning: line too long ./Tutorial/chapter_graphics.tex:1089: Warning: Image in text ./Tutorial/chapter_graphics.tex:1089: Warning: '_' occurring outside math mode ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_kegg.tex:1: Warning: line too long ./Tutorial/chapter_phenotype.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:16: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:32: Warning: '_' occurring outside math mode ./Tutorial/chapter_phenotype.tex:229: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:231: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_phenotype.tex:233: Warning: Optional argument to \item in itemize environment ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:1: Warning: line too long ./Tutorial/chapter_cookbook.tex:22: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:58: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:103: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:146: Warning: Undefined label: 'sec:Bio.SeqIO-and-StringIO' ./Tutorial/chapter_cookbook.tex:192: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:197: Warning: Undefined label: 'sec:SeqIO-reverse-complement' ./Tutorial/chapter_cookbook.tex:317: Warning: Undefined label: 'sec:seqio-index-getraw' ./Tutorial/chapter_cookbook.tex:415: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:424: Warning: line too long ./Tutorial/chapter_cookbook.tex:429: Warning: Undefined label: 'sec:low-level-fasta-fastq' ./Tutorial/chapter_cookbook.tex:449: Warning: Undefined label: 'sec:SeqRecord-slicing' ./Tutorial/chapter_cookbook.tex:519: Warning: line too long ./Tutorial/chapter_cookbook.tex:597: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:600: Warning: Undefined citation: 'cock2010' ./Tutorial/chapter_cookbook.tex:750: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:753: Warning: line too long ./Tutorial/chapter_cookbook.tex:772: Warning: Undefined label: 'sec:SeqIO-index' ./Tutorial/chapter_cookbook.tex:774: Warning: Undefined label: 'sec:SeqIO-sort' ./Tutorial/chapter_cookbook.tex:788: Warning: Undefined label: 'sec:SeqIO-conversion' ./Tutorial/chapter_cookbook.tex:854: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:855: Warning: Undefined label: 'sec:translation' ./Tutorial/chapter_cookbook.tex:967: Warning: Undefined label: 'sec:gd_nice_example' ./Tutorial/chapter_cookbook.tex:984: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_cookbook.tex:996: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1034: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1034: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1067: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1098: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1098: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1146: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1194: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1194: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1268: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1290: Warning: line too long ./Tutorial/chapter_cookbook.tex:1291: Warning: line too long ./Tutorial/chapter_cookbook.tex:1337: Warning: Image in text ./Tutorial/chapter_cookbook.tex:1343: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1346: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1350: Warning: Undefined label: 'chapter:Bio.AlignIO' ./Tutorial/chapter_cookbook.tex:1360: Warning: Undefined label: 'sec:consensus' ./Tutorial/chapter_cookbook.tex:1361: Warning: Undefined label: 'sec:pssm' ./Tutorial/chapter_cookbook.tex:1362: Warning: Undefined label: 'sec:getting_info_content' ./Tutorial/chapter_cookbook.tex:1363: Warning: Undefined label: 'sec:sub_matrix' ./Tutorial/chapter_cookbook.tex:1369: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1470: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1497: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1516: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_cookbook.tex:1570: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1579: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:align_clustal' ./Tutorial/chapter_cookbook.tex:1603: Warning: Undefined label: 'sec:summary_info' ./Tutorial/chapter_cookbook.tex:1696: Warning: '_' occurring outside math mode ./Tutorial/chapter_cookbook.tex:1701: Warning: Undefined label: 'chapter:Bio.SeqIO' ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:1: Warning: line too long ./Tutorial/chapter_testing.tex:2: Warning: '_' occurring outside math mode ./Tutorial/chapter_testing.tex:49: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:349: Warning: line too long ./Tutorial/chapter_testing.tex:402: Warning: line too long ./Tutorial/chapter_testing.tex:409: Warning: Undefined label: 'section:doctest' ./Tutorial/chapter_testing.tex:494: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:502: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:508: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_testing.tex:514: Warning: Undefined block in text mode: 'DIV' [] ./Tutorial/chapter_advanced.tex:163: Warning: Undefined label: 'sec:freq_table' ./Tutorial/chapter_advanced.tex:190: Warning: line too long ./Tutorial/chapter_advanced.tex:223: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:10: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:31: Warning: Undefined label: 'chapter:cookbook' ./Tutorial/chapter_contributing.tex:37: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:79: Warning: '_' occurring outside math mode ./Tutorial/chapter_contributing.tex:84: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_contributing.tex:100: Warning: Undefined label: 'sec:regr_test' ./Tutorial/chapter_appendix.tex:88: Warning: Undefined label: 'sec:SeqIO_compressed' ./Tutorial.tex:122: Warning: line too long ./Tutorial.tex:133: Warning: Application of '\'' on 'e' failed ./Tutorial.tex:133: Warning: Application of '\'' on 'o' failed ./Tutorial.tex:137: Warning: Application of '\"' on 'u' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'o' failed ./Tutorial.tex:202: Warning: Application of '\"' on 'u' failed Fixpoint reached in 3 step(s) pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 65. No file Tutorial.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) Excluding 'htmlonly' comment. Excluding 'rawhtml' comment. [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map} <./images/biopython_logo.pdf>]pdfTeX warning (ext4): destination with the same identifier (name{page.1}) has been already us ed, duplicate ignored \relax l.97 \include{Tutorial/chapter_introduction} [1] (./Tutorial/chapter_introduction.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [2] LaTeX Warning: Citation `cock2009' on page 3 undefined on input line 110. [3] LaTeX Warning: Citation `chapman2000' on page 4 undefined on input line 114. LaTeX Warning: Citation `hamelryck2003a' on page 4 undefined on input line 115. LaTeX Warning: Citation `dehoon2004' on page 4 undefined on input line 116. LaTeX Warning: Citation `pritchard2006' on page 4 undefined on input line 117. LaTeX Warning: Citation `talevich2012' on page 4 undefined on input line 118. LaTeX Warning: Citation `cock2010' on page 4 undefined on input line 119. Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [4 <./images/biopython_logo_old.jpg>] LaTeX Warning: Reference `sec:seq-comparison' on page 5 undefined on input line 237. [5] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . LaTeX Warning: Reference `sec:appendix-handles' on page 6 undefined on input li ne 250. [6] LaTeX Warning: Reference `sec:SeqIO-conversion' on page 7 undefined on input li ne 292. LaTeX Warning: Reference `sec:converting-alignments' on page 7 undefined on inp ut line 292. ) [7] (./Tutorial/chapter_quick_start.tex Chapter 2. LaTeX Warning: Reference `chapter:cookbook' on page 8 undefined on input line 1 4. LaTeX Warning: Reference `chapter:advanced' on page 8 undefined on input line 1 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 8 undefined on input line 19 . [8] LaTeX Warning: Reference `chapter:Bio.Seq' on page 9 undefined on input line 35 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 9 undefined on input line 49. LaTeX Warning: Reference `sec:sequence-parsing' on page 9 undefined on input li ne 69. LaTeX Warning: Reference `chapter:entrez' on page 9 undefined on input line 69. LaTeX Warning: Reference `chapter:swiss_prot' on page 9 undefined on input line 69. LaTeX Warning: Reference `sec:align_clustal' on page 9 undefined on input line 69. [9] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 10 undefined on input line 76. LaTeX Warning: Reference `sec:connecting-with-biological-databases' on page 10 undefined on input line 83. Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [10] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 11 undefined on input line 149. LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 11 undefined on input li ne 149. LaTeX Warning: Reference `chapter:cookbook' on page 11 undefined on input line 154. LaTeX Warning: Reference `chapter:entrez' on page 11 undefined on input line 16 2. LaTeX Warning: Reference `chapter:swiss_prot' on page 11 undefined on input lin e 163. [11] LaTeX Warning: Reference `chapter:cookbook' on page 12 undefined on input line 173. ) [12] (./Tutorial/chapter_seq_objects.tex Chapter 3. LaTeX Warning: Reference `chapter:SeqRecord' on page 13 undefined on input line 5. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 13 undefined on input line 5. [13] [14] LaTeX Warning: Reference `sec:mutable-seq' on page 15 undefined on input line 1 37. [15] LaTeX Warning: Reference `sec:SeqRecord-format' on page 16 undefined on input l ine 207. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 16 undefined on input line 209. [16] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [17] [18] LaTeX Warning: Reference `sec:SeqIO-reverse-complement' on page 19 undefined on input line 376. [19] LaTeX Warning: Reference `sec:seq-module-functions' on page 20 undefined on inp ut line 449. [20] [21] LaTeX Warning: Reference `sec:SeqIO-translate' on page 22 undefined on input li ne 564. LaTeX Warning: Reference `sec:seq-module-functions' on page 22 undefined on inp ut line 570. [22] [23] LaTeX Warning: Reference `sec:seq-to-string' on page 24 undefined on input line 719. [24] LaTeX Warning: Reference `sec:seq-to-string' on page 25 undefined on input line 810. [25] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 26 undefined on input line 871. [26]) [27] (./Tutorial/chapter_seq_annot.tex Chapter 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 28 undefined on input line 4 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 28 undefined on input line 4. LaTeX Warning: Reference `chapter:Bio.Seq' on page 28 undefined on input line 2 1. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 28 undefined on input line 21. LaTeX Warning: Reference `sec:FASTQ-filtering-example' on page 28 undefined on input line 34. [28] LaTeX Warning: Reference `sec:seq_features' on page 29 undefined on input line 38. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 29 undefined on input line 48. [29] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] LaTeX Warning: Reference `chapter:quick-start' on page 30 undefined on input li ne 131. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 30 undefined on input line 133. Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 30 undefined on input line 158. Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [30] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 31 undefined on input line 216. Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 31 undefined on input line 229. [31] LaTeX Warning: Reference `sec:seq_features' on page 32 undefined on input line 279. LaTeX Warning: Reference `sec:locations' on page 32 undefined on input line 288 . LaTeX Warning: Reference `sec:locations' on page 32 undefined on input line 296 . [32] [33] [34] [35] LaTeX Warning: Reference `sec:locations' on page 36 undefined on input line 528 . Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [36] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] LaTeX Warning: Reference `sec:seq-comparison' on page 37 undefined on input lin e 632. LaTeX Warning: Reference `sec:locations' on page 37 undefined on input line 640 . [37] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 38 undefined on input line 676. LaTeX Warning: Reference `sec:Bio.SeqIO-and-StringIO' on page 38 undefined on i nput line 679. Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [38] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [39] LaTeX Warning: Reference `sec:SeqRecord-format' on page 40 undefined on input l ine 833. Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] LaTeX Warning: Reference `sec:FASTQ-slicing-off-primer' on page 40 undefined on input line 841. LaTeX Warning: Reference `sec:FASTQ-slicing-off-adaptor' on page 40 undefined o n input line 842. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 40 undefined on input line 855. [40] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [41] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [42] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [43] (./Tutorial/chapter_seqio.tex Chapter 5. LaTeX Warning: Reference `chapter:quick-start' on page 44 undefined on input li ne 4. LaTeX Warning: Reference `chapter:SeqRecord' on page 44 undefined on input line 4. LaTeX Warning: Reference `chapter:SeqRecord' on page 44 undefined on input line 13. LaTeX Warning: Reference `chapter:Bio.Seq' on page 44 undefined on input line 1 3. LaTeX Warning: Reference `sec:low-level-fasta-fastq' on page 44 undefined on in put line 15. LaTeX Warning: Reference `sec:SeqIO_Online' on page 44 undefined on input line 23. LaTeX Warning: Reference `sec:appendix-handles' on page 44 undefined on input l ine 23. [44] LaTeX Warning: Reference `sec:sequence-parsing' on page 45 undefined on input l ine 45. Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] LaTeX Warning: Reference `seq:sequence-parsing-plus-pylab' on page 45 undefined on input line 69. [45] [46] LaTeX Warning: Reference `chapter:SeqRecord' on page 47 undefined on input line 148. [47] [48] LaTeX Warning: Reference `sec:appendix-handles' on page 49 undefined on input l ine 283. [49] LaTeX Warning: Reference `sec:SeqIO-index-bgzf' on page 50 undefined on input l ine 359. LaTeX Warning: Reference `sec:efetch' on page 50 undefined on input line 375. Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [50] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] LaTeX Warning: Reference `chapter:entrez' on page 51 undefined on input line 45 1. LaTeX Warning: Reference `sec:entrez-guidelines' on page 51 undefined on input line 451. LaTeX Warning: Reference `chapter:swiss_prot' on page 51 undefined on input lin e 456. Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [51] LaTeX Warning: Reference `SeqIO:to_dict' on page 52 undefined on input line 491 . LaTeX Warning: Reference `sec:SeqIO-index' on page 52 undefined on input line 4 97. LaTeX Warning: Reference `sec:SeqIO-index-db' on page 52 undefined on input lin e 501. LaTeX Warning: Reference `sec:SeqIO-indexing-discussion' on page 52 undefined o n input line 504. LaTeX Warning: Reference `sec:SeqIO-index' on page 52 undefined on input line 5 14. [52] LaTeX Warning: Reference `sec:fasta-parsing' on page 53 undefined on input line 588. Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [53] [54] LaTeX Warning: Reference `sec:fastq-indexing' on page 55 undefined on input lin e 704. LaTeX Warning: Reference `seq:seqio-todict-functionkey' on page 55 undefined on input line 725. Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [55] LaTeX Warning: Reference `sec:SeqIO-sort' on page 56 undefined on input line 78 7. Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [56] LaTeX Warning: Reference `sec:seqio-index-getraw' on page 57 undefined on input line 869. [57] [58] [59] LaTeX Warning: Reference `sec:seqio-index-getraw' on page 60 undefined on input line 1097. [60] LaTeX Warning: Reference `sec:SeqIO-fastq-conversion' on page 61 undefined on i nput line 1139. LaTeX Warning: Reference `sec:SeqIO-fasta-qual-conversion' on page 61 undefined on input line 1139. LaTeX Warning: Reference `sec:seq-reverse-complement' on page 61 undefined on i nput line 1154. LaTeX Warning: Reference `sec:SeqRecord-reverse-complement' on page 61 undefine d on input line 1164. Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [61] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] LaTeX Warning: Reference `sec:SeqIO-translate' on page 62 undefined on input li ne 1205. LaTeX Warning: Reference `sec:SeqRecord-format' on page 62 undefined on input l ine 1224. Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [62] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator LaTeX Warning: Reference `chapter:cookbook' on page 63 undefined on input line 1303. ) [63] (./Tutorial/chapter_align.tex Chapter 6. LaTeX Warning: Reference `sec:appendix-handles' on page 64 undefined on input l ine 31. LaTeX Warning: Reference `sec:AlignIO-count-argument' on page 64 undefined on i nput line 35. [64] [65] LaTeX Warning: Reference `sec:alignment-format-method' on page 66 undefined on input line 115. [66] [67] [68] [69] [70] [71] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() LaTeX Warning: Reference `sec:SeqIO-conversion' on page 72 undefined on input l ine 445. Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [72] [73] [74] LaTeX Warning: Reference `sec:SeqRecord-format' on page 75 undefined on input l ine 617. Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [75] [76] LaTeX Warning: Reference `sec:SeqRecord-addition' on page 77 undefined on input line 792. [77] LaTeX Warning: Reference `sec:pairwise2' on page 78 undefined on input line 844 . LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 78 undefined on input line 849. LaTeX Warning: Reference `seq:emboss-needle-water' on page 78 undefined on inpu t line 876. [78] [79] LaTeX Warning: Reference `sec:Phylo' on page 80 undefined on input line 1023. [80] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [81] [82] LaTeX Warning: Reference `sec:appendix-handles' on page 83 undefined on input l ine 1245. [83] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [84] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [85] [86] LaTeX Warning: Citation `durbin1998' on page 87 undefined on input line 1550. [87] LaTeX Warning: Reference `sec:pairwise-aligner' on page 88 undefined on input l ine 1562. [88] LaTeX Warning: Reference `sec:pairwise-matchscores' on page 89 undefined on inp ut line 1644. LaTeX Warning: Reference `sec:pairwise-affine-gapscores' on page 89 undefined o n input line 1644. LaTeX Warning: Reference `sec:pairwise-general-gapscores' on page 89 undefined on input line 1644. LaTeX Warning: Reference `sec:pairwise-basic' on page 89 undefined on input lin e 1645. LaTeX Warning: Reference `sec:pairwise-affine-gapscores' on page 89 undefined o n input line 1648. LaTeX Warning: Reference `sec:pairwise-general-gapscores' on page 89 undefined on input line 1649. [89] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [90] [91] [92] LaTeX Warning: Reference `sec:pairwise-examples' on page 93 undefined on input line 1855. [93] [94] LaTeX Warning: Citation `kent2002' on page 95 undefined on input line 1982. Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [95] [96]) [97] (./Tutorial/chapter_blast.tex Chapter 7. LaTeX Warning: Reference `chapter:searchio' on page 98 undefined on input line 18. [98] LaTeX Warning: Reference `sec:parsing-blast' on page 99 undefined on input line 58. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 99 undefined on input line 119. LaTeX Warning: Reference `sec:parsing-blast' on page 99 undefined on input line 124. [99] LaTeX Warning: Reference `sec:parsing-blast' on page 100 undefined on input lin e 146. LaTeX Warning: Reference `sec:parsing-blast' on page 100 undefined on input lin e 155. LaTeX Warning: Reference `sec:running-www-blast' on page 100 undefined on input line 164. LaTeX Warning: Reference `sec:alignment-tools' on page 100 undefined on input l ine 192. [100] LaTeX Warning: Reference `sec:parsing-blast' on page 101 undefined on input lin e 236. LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 101 undefined o n input line 268. LaTeX Warning: Reference `sec:running-www-blast' on page 101 undefined on input line 282. LaTeX Warning: Reference `sec:running-local-blast' on page 101 undefined on inp ut line 284. [101] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 102 undefined on input lin e 335. LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 102 undefined on input l ine 335. [102] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [103] LaTeX Warning: Reference `fig:blastrecord' on page 104 undefined on input line 445. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:psiblastrecord' on page 104 undefined on input li ne 461. Excluding 'htmlonly' comment.) [104] [105 <./images/BlastRecord.png>] [106 <./i mages/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [107] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [108] [109] [110] [111] [112] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [113] [114] [115] [116] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] LaTeX Warning: Reference `chapter:SeqRecord' on page 117 undefined on input lin e 734. Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [117] [118] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [119] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [120] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , LaTeX Warning: Reference `sec:SeqIO-index' on page 121 undefined on input line 1082. Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [121] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [122]) [123] (./Tutorial/chapter_entrez.tex Chapter 9. LaTeX Warning: Reference `sec:entrez-specialized-parsers' on page 124 undefined on input line 22. [124] LaTeX Warning: Reference `sec:entrez-webenv' on page 125 undefined on input lin e 57. LaTeX Warning: Reference `sec:BioSQL' on page 125 undefined on input line 60. [125] [126] [127] LaTeX Warning: Reference `sec:efetch' on page 128 undefined on input line 209. LaTeX Warning: Reference `sec:entrez-einfo' on page 128 undefined on input line 213. Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] LaTeX Warning: Reference `sec:efetch' on page 128 undefined on input line 227. [128] LaTeX Warning: Reference `sec:entrez-webenv' on page 129 undefined on input lin e 289. [129] LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 130 undefined on in put line 314. LaTeX Warning: Reference `sec:efetch' on page 130 undefined on input line 314. [130] [131] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 132 undefined on input lin e 408. Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [132] LaTeX Warning: Reference `sec:entrez-specialized-parsers' on page 133 undefined on input line 467. LaTeX Warning: Reference `sec:entrez-webenv' on page 133 undefined on input lin e 469. [133] LaTeX Warning: Reference `sec:elink-citations' on page 134 undefined on input l ine 550. LaTeX Warning: Reference `subsec:entrez_example_genbank' on page 134 undefined on input line 556. [134] [135] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [136] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [137] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 138 undefined on in put line 767. LaTeX Warning: Reference `sec:efetch' on page 138 undefined on input line 767. [138] [139] LaTeX Warning: Reference `sec:entrez-webenv' on page 140 undefined on input lin e 884. [140] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [141] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [142] LaTeX Warning: Reference `sec:orchids' on page 143 undefined on input line 1042 . LaTeX Warning: Reference `sec:entrez-webenv' on page 143 undefined on input lin e 1083. [143] LaTeX Warning: Reference `sec:orchids' on page 144 undefined on input line 1128 . Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [144] LaTeX Warning: Reference `sec:entrez-webenv' on page 145 undefined on input lin e 1180. [145] LaTeX Warning: Reference `sec:entrez-webenv' on page 146 undefined on input lin e 1215. LaTeX Warning: Reference `sec:SeqIO_GenBank_Online' on page 146 undefined on in put line 1222. LaTeX Warning: Reference `sec:entrez-webenv' on page 146 undefined on input lin e 1223. [146] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 147 undefined on input lin e 1275. LaTeX Warning: Reference `sec:entrez-guidelines' on page 147 undefined on input line 1299. LaTeX Warning: Reference `sec:entrez-webenv' on page 147 undefined on input lin e 1300. [147] LaTeX Warning: Reference `sec:entrez-search-fetch-genbank' on page 148 undefine d on input line 1358. [148] LaTeX Warning: Reference `subsec:entrez_example_genbank' on page 149 undefined on input line 1389. [149] LaTeX Warning: Reference `subsec:entrez-and-medline' on page 150 undefined on i nput line 1487. LaTeX Warning: Reference `sec:elink' on page 150 undefined on input line 1492. [150] LaTeX Warning: Reference `sec:entrez-webenv' on page 151 undefined on input lin e 1516. ) [151] (./Tutorial/chapter_uniprot.tex Chapter 10. LaTeX Warning: Reference `sec:SeqIO_ExPASy_and_SwissProt' on page 152 undefined on input line 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] LaTeX Warning: Reference `subsec:expasy_swissprot' on page 152 undefined on inp ut line 41. [152] LaTeX Warning: Reference `sec:SeqIO_ExPASy_and_SwissProt' on page 153 undefined on input line 49. Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [153] [154] [155] [156] [157] LaTeX Warning: Reference `sec:orchids' on page 158 undefined on input line 347. [158] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [159] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [160]) [161] (./Tutorial/chapter_pdb.tex Chapter 11. LaTeX Warning: Reference `problem structures' on page 162 undefined on input li ne 18. [162] [163] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [164] LaTeX Warning: Reference `fig:smcra' on page 165 undefined on input line 207. LaTeX Warning: Reference `problem structures' on page 165 undefined on input li ne 216. Excluding 'htmlonly' comment. [165] [166 <./images/smcra.png (PNG copy)>] [167] LaTeX Warning: Reference `hetero problems' on page 168 undefined on input line 353. LaTeX Warning: Reference `point mutations' on page 168 undefined on input line 398. LaTeX Warning: Reference `disordered atoms' on page 168 undefined on input line 415. [168] [169] LaTeX Warning: Reference `fig:smcra' on page 170 undefined on input line 540. [170] LaTeX Warning: Reference `fig:smcra' on page 171 undefined on input line 586. [171] [172] [173] [174] LaTeX Warning: Citation `golub1989' on page 175 undefined on input line 870. [175] LaTeX Warning: Citation `hamelryck2005' on page 176 undefined on input line 898 . LaTeX Warning: Command \r invalid in math mode on input line 901. LaTeX Warning: Reference `cap:DSSP-codes' on page 176 undefined on input line 9 33. LaTeX Warning: Reference `subsec:residue_depth' on page 176 undefined on input line 972. [176] LaTeX Warning: Citation `hamelryck2003a' on page 177 undefined on input line 10 22. [177] [178] [179] LaTeX Warning: Citation `hamelryck2003b' on page 180 undefined on input line 12 34. LaTeX Warning: Citation `majumdar2005' on page 180 undefined on input line 1235 . [180]) [181] (./Tutorial/chapter_popgen.tex Chapter 12. [182]) [183] (./Tutorial/chapter_phylo.tex Chapter 13. LaTeX Warning: Citation `talevich2012' on page 184 undefined on input line 9. [184] LaTeX Warning: Reference `fig:phylo-simple-draw' on page 185 undefined on input line 96. Excluding 'htmlonly' comment. [185] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor LaTeX Warning: Reference `fig:phylo-color-draw' on page 186 undefined on input line 192. [186 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [187 <./im ages/phylo-color-draw.png>] [188] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-dot' on page 189 undefined on input line 37 6. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-rooted' on page 189 undefined on input line 412. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-color' on page 189 undefined on input line 428. [189] [190 <./images/phylo-draw-example.png> <./images/phylo-dot.png>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-apaf' on page 191 undefined on input line 4 62. LaTeX Warning: Reference `fig:phylo-apaf-zoom' on page 191 undefined on input l ine 462. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:phylo-apaf' on page 191 undefined on input line 4 87. [191 <./images/phylo-rooted.png> <./images/phylo-color.png>] [192 <./images/phy lo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [193] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [194] [195] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- LaTeX Warning: Reference `sec:alignment-tools' on page 196 undefined on input l ine 832. [196] LaTeX Warning: Reference `sec:PhyloXML' on page 197 undefined on input line 903 . [197]) [198] (./Tutorial/chapter_motifs.tex Chapter 14. LaTeX Warning: Reference `sec:links' on page 199 undefined on input line 7. [199] [200] LaTeX Warning: Citation `cornish1985' on page 201 undefined on input line 152. LaTeX Warning: Citation `cavener1987' on page 201 undefined on input line 153. [201] [202] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [203] [204] [205] [206] [207] LaTeX Warning: Citation `bailey1994' on page 208 undefined on input line 522. [208] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [209] [210] LaTeX Warning: Citation `matys2003' on page 211 undefined on input line 658. [211] LaTeX Warning: Reference `table:transfaccodes' on page 212 undefined on input l ine 733. LaTeX Warning: `h' float specifier changed to `ht'. [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) [224] (./Tutorial/chapter_cluster.tex Chapter 15. LaTeX Warning: Citation `dehoon2004' on page 225 undefined on input line 5. LaTeX Warning: Citation `lecuyer1988' on page 225 undefined on input line 29. LaTeX Warning: Citation `kachitvichyanukul1988' on page 225 undefined on input line 29. [225] [226] [227] LaTeX Warning: Citation `snedecor1989' on page 228 undefined on input line 153. [228] LaTeX Warning: Reference `sec:distancefunctions' on page 229 undefined on input line 182. [229] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [230] LaTeX Warning: Reference `sec:distancefunctions' on page 231 undefined on input line 263. [231] [232] LaTeX Warning: Reference `sec:distancefunctions' on page 233 undefined on input line 331. [233] [234] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [235] [236] LaTeX Warning: Reference `sec:distancefunctions' on page 237 undefined on input line 546. [237] LaTeX Warning: Citation `kohonen1997' on page 238 undefined on input line 594. LaTeX Warning: Citation `tamayo1999' on page 238 undefined on input line 594. [238] [239] LaTeX Warning: Reference `sec:distancefunctions' on page 240 undefined on input line 641. Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ LaTeX Warning: Citation `yeung2001' on page 240 undefined on input line 654. LaTeX Warning: Citation `golub1971' on page 240 undefined on input line 662. [240] Overfull \hbox (175.98935pt too wide) in paragraph at lines 707--707 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserco ntent.com/biopython/biopython/master/Tests/Cluster/cyano.txt"))[] Overfull \hbox (97.24004pt too wide) in paragraph at lines 715--715 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/biop ython/biopython/master/Tests/Cluster/cyano.txt")[] [241] Overfull \hbox (25.39864pt too wide) in paragraph at lines 740--751 [] [242] LaTeX Warning: Reference `sec:distancefunctions' on page 243 undefined on input line 803. LaTeX Warning: Reference `subsec:distancematrix' on page 243 undefined on input line 806. LaTeX Warning: Reference `subsec:clustercentroids' on page 243 undefined on inp ut line 824. [243] LaTeX Warning: Reference `sec:distancefunctions' on page 244 undefined on input line 847. LaTeX Warning: Reference `sec:distancefunctions' on page 244 undefined on input line 872. [244] LaTeX Warning: Reference `sec:distancefunctions' on page 245 undefined on input line 901. [245] LaTeX Warning: Reference `sec:distancefunctions' on page 246 undefined on input line 923. Overfull \hbox (106.77225pt too wide) in paragraph at lines 930--932 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [246] LaTeX Warning: Citation `hihara2001' on page 247 undefined on input line 955. ) Overfull \hbox (26.21434pt too wide) in paragraph at lines 986--111 []\OT1/cmr/m/n/10 This will cre-ate the files [][]\OT1/cmtt/m/n/10 cyano_result _K_G2_A2.cdt[]\OT1/cmr/m/n/10 , [][]\OT1/cmtt/m/n/10 cyano_result_K_G2.kgg[]\OT 1/cmr/m/n/10 , and [][]\OT1/cmtt/m/n/10 cyano_result_K_A2.kag[]\OT1/cmr/m/n/10 . [247] (./Tutorial/chapter_learning.tex Chapter 16. [248] LaTeX Warning: Reference `eq:OP' on page 249 undefined on input line 39. LaTeX Warning: Reference `eq:NOP' on page 249 undefined on input line 39. LaTeX Warning: Reference `table:training' on page 249 undefined on input line 7 4. [249] [250] [251] LaTeX Warning: Reference `eq:OP' on page 252 undefined on input line 210. LaTeX Warning: Reference `eq:NOP' on page 252 undefined on input line 210. [252] LaTeX Warning: Reference `eq:OP' on page 253 undefined on input line 272. LaTeX Warning: Reference `eq:NOP' on page 253 undefined on input line 272. LaTeX Warning: Reference `eq:OP' on page 253 undefined on input line 274. LaTeX Warning: Reference `eq:NOP' on page 253 undefined on input line 274. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. LaTeX Warning: Reference `sec:LogisticRegression' on page 253 undefined on inpu t line 284. [253] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. LaTeX Warning: Reference `table:training' on page 254 undefined on input line 2 88. LaTeX Warning: Reference `subsec:LogisticRegressionTraining' on page 254 undefi ned on input line 296. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. [254] [255]) [256] (./Tutorial/chapter_graphics.tex Chapter 17. LaTeX Warning: Citation `pritchard2006' on page 257 undefined on input line 18. LaTeX Warning: Citation `toth2006' on page 257 undefined on input line 28. LaTeX Warning: Citation `vanderauwera2009' on page 257 undefined on input line 31. LaTeX Warning: Reference `chapter:SeqRecord' on page 257 undefined on input lin e 36. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 257 undefined on input lin e 36. [257] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 258 undefined on input lin e 64. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:plasmid_linear' on page 258 undefined on input li ne 129. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:plasmid_circular' on page 258 undefined on input line 154. [258] [259 <./images/plasmid_linear.png (PNG copy)> <./images/plasmid_circular. png (PNG copy)>] LaTeX Warning: Reference `sec:seq_features' on page 260 undefined on input line 206. [260] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:gd_sigil_labels' on page 261 undefined on input l ine 246. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:gd_sigil_labels' on page 261 undefined on input l ine 305. LaTeX Warning: Reference `sec:gd_features_without_seqfeatures' on page 261 unde fined on input line 314. LaTeX Warning: Reference `sec:gd_feature_captions' on page 261 undefined on inp ut line 314. LaTeX Warning: Reference `sec:gd_features_without_seqfeatures' on page 261 unde fined on input line 314. LaTeX Warning: Reference `sec:gd_feature_captions' on page 261 undefined on inp ut line 314. LaTeX Warning: Reference `sec:gd_nice_example' on page 261 undefined on input l ine 320. [261] [262 <./images/GD_sigil_labels.png (PNG copy)>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:gd_sigils' on page 263 undefined on input line 36 2. Excluding 'htmlonly' comment. LaTeX Warning: Reference `sec:gd_sigils' on page 263 undefined on input line 37 8. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:gd_sigil_arrow_shafts' on page 263 undefined on i nput line 410. LaTeX Warning: Reference `sec:gd_arrow_sigils' on page 263 undefined on input l ine 415. [263] [264 <./images/GD_sigils.png>] [265 <./images/GD_sigil_arrow_shafts.png>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:gd_sigil_arrow_heads' on page 266 undefined on in put line 442. LaTeX Warning: Reference `sec:gd_arrow_sigils' on page 266 undefined on input l ine 447. [266 <./images/GD_sigil_arrow_heads.png>] LaTeX Warning: Reference `sec:gd_top_down' on page 267 undefined on input line 467. [267] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:plasmid_linear_nice' on page 268 undefined on inp ut line 536. LaTeX Warning: Reference `fig:plasmid_circular_nice' on page 268 undefined on i nput line 537. LaTeX Warning: Reference `sec:gd_nice_example' on page 268 undefined on input l ine 543. LaTeX Warning: Reference `sec:gd_nice_example' on page 268 undefined on input l ine 543. LaTeX Warning: Reference `sec:gd_nice_example' on page 268 undefined on input l ine 551. LaTeX Warning: Reference `sec:gd_nice_example' on page 268 undefined on input l ine 551. LaTeX Warning: Citation `proux2002' on page 268 undefined on input line 562. LaTeX Warning: Reference `sec:efetch' on page 268 undefined on input line 571. LaTeX Warning: Reference `sec:SeqRecord-slicing' on page 268 undefined on input line 574. LaTeX Warning: Reference `sec:SeqRecord-reverse-complement' on page 268 undefin ed on input line 576. [268 <./images/plasmid_linear_nice.png (PNG copy)>] [269 <./images/plasmid_circ ular_nice.png>] Overfull \hbox (2.74086pt too wide) in paragraph at lines 605--605 []\OT1/cmtt/m/n/10 A_colors = [red]*5 + [grey]*7 + [orange]*2 + [grey]*2 + [ora nge] + [grey]*11 + [green]*4 \[] [270] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:three_track_simple' on page 271 undefined on inpu t line 651. LaTeX Warning: Reference `sec:gd_multiple_tracks' on page 271 undefined on inpu t line 658. LaTeX Warning: Reference `sec:gd_multiple_tracks' on page 271 undefined on inpu t line 658. LaTeX Warning: Citation `proux2002' on page 271 undefined on input line 678. [271 <./images/three_track_simple.png>] [272] Overfull \hbox (28.99063pt too wide) in paragraph at lines 782--782 [] \OT1/cmtt/m/n/10 color = colors.linearlyInterpolatedColor(colors.whit e, colors.firebrick, 0, 100, score)[] Overfull \hbox (2.65141pt too wide) in paragraph at lines 784--790 []\OT1/cmr/m/n/10 There are sev-eral im-por-tant pieces to this code. First the [][]\OT1/cmtt/m/n/10 GenomeDiagram []\OT1/cmr/m/n/10 ob-ject has a [][]\OT1/cm tt/m/n/10 cross_track_links Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:three_track_cl' on page 273 undefined on input li ne 805. LaTeX Warning: Reference `sec:gd_cross_links' on page 273 undefined on input li ne 812. LaTeX Warning: Reference `sec:gd_cross_links' on page 273 undefined on input li ne 812. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:three_track_cl2' on page 273 undefined on input l ine 838. LaTeX Warning: Reference `sec:gd_cross_links' on page 273 undefined on input li ne 845. LaTeX Warning: Reference `sec:gd_cross_links' on page 273 undefined on input li ne 845. [273] [274 <./images/three_track_cl.png>] [275 <./images/three_track_cl2a.png>] LaTeX Warning: Citation `jupe2012' on page 276 undefined on input line 919. [276] [277 <./images/simple_chrom.pdf> <./images/tRNA_chrom.pdf>] [278] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:simplechromosome' on page 279 undefined on input line 1016. [279] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:simplechromosome' on page 280 undefined on input line 1093. ) [280] (./Tutorial/chapter_kegg.tex Chapter 18. [281] [282]) [283] (./Tutorial/chapter_phenotype.tex Chapter 19. [284] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['A12']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['B01'], WellReco rd['C01'], ..., WellRecord['H01']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['C03']')[] [285] [286] [287]) [288] (./Tutorial/chapter_cookbook.tex Chapter 20. LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 289 undefined on input lin e 22. [289] LaTeX Warning: Reference `sec:low-level-fasta-fastq' on page 290 undefined on i nput line 58. [290] LaTeX Warning: Reference `sec:Bio.SeqIO-and-StringIO' on page 291 undefined on input line 146. LaTeX Warning: Reference `sec:translation' on page 291 undefined on input line 192. [291] LaTeX Warning: Reference `sec:SeqIO-reverse-complement' on page 292 undefined o n input line 197. [292] LaTeX Warning: Reference `sec:seqio-index-getraw' on page 293 undefined on inpu t line 317. [293] [294] LaTeX Warning: Reference `sec:low-level-fasta-fastq' on page 295 undefined on i nput line 415. LaTeX Warning: Reference `sec:low-level-fasta-fastq' on page 295 undefined on i nput line 429. Overfull \hbox (5.83499pt too wide) in paragraph at lines 426--430 \OT1/cmr/m/n/10 mat (e.g. FASTA files). How-ever, for large FASTQ files it woul d be faster the low-level [][]\OT1/cmtt/m/n/10 FastqGeneralIterator Overfull \hbox (4.57849pt too wide) in paragraph at lines 444--446 \OT1/cmr/m/n/10 That should find $13819$ reads from \OT1/cmtt/m/n/10 SRR014849. fastq \OT1/cmr/m/n/10 and save them to a new FASTQ file, \OT1/cmtt/m/n/10 with[ ]primer.fastq\OT1/cmr/m/n/10 . LaTeX Warning: Reference `sec:SeqRecord-slicing' on page 295 undefined on input line 449. [295] [296] LaTeX Warning: Reference `sec:SeqIO-conversion' on page 297 undefined on input line 597. LaTeX Warning: Citation `cock2010' on page 297 undefined on input line 600. [297] [298] LaTeX Warning: Reference `sec:SeqIO-index' on page 299 undefined on input line 750. Overfull \hbox (7.99081pt too wide) in paragraph at lines 765--765 []\OT1/cmtt/m/n/10 Seq('GTCCCAGTATTCGGATTTGTCTGCCAAAACAATGAAATTGACACAGTTTACAAC. ..CCG', SingleLetterAlphabet())[] [299] LaTeX Warning: Reference `sec:SeqIO-index' on page 300 undefined on input line 772. LaTeX Warning: Reference `sec:SeqIO-sort' on page 300 undefined on input line 7 74. LaTeX Warning: Reference `sec:SeqIO-conversion' on page 300 undefined on input line 788. [300] LaTeX Warning: Reference `sec:translation' on page 301 undefined on input line 855. [301] LaTeX Warning: Reference `sec:gd_nice_example' on page 302 undefined on input l ine 967. [302] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 303 undefined on input lin e 984. Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:seq-len-hist' on page 303 undefined on input line 1049. Overfull \hbox (4.00363pt too wide) in paragraph at lines 1057--1060 []\OT1/cmr/m/it/10 Tip: \OT1/cmr/m/n/10 Rather than us-ing [][]\OT1/cmtt/m/n/10 pylab.show() []\OT1/cmr/m/n/10 to show the plot in a win-dow, you can also use [][]\OT1/cmtt/m/n/10 pylab.savefig(...) [303] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:seq-gc-plot' on page 304 undefined on input line 1112. LaTeX Warning: Reference `fig:nuc-dot-plot' on page 304 undefined on input line 1126. Excluding 'htmlonly' comment. [304 <./images/hist_plot.png>] [305 <./images/gc_ plot.png>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:nuc-dot-plot' on page 306 undefined on input line 1198. [306 <./images/dot_plot.png>] Excluding 'htmlonly' comment. LaTeX Warning: Reference `fig:nuc-dot-plot-scatter' on page 307 undefined on in put line 1272. [307] LaTeX Warning: Reference `fig:paired-end-qual-plot' on page 308 undefined on in put line 1331. Excluding 'htmlonly' comment. LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 308 undefined on input l ine 1343. [308 <./images/dot_plot_scatter.png>] LaTeX Warning: Reference `chapter:Bio.AlignIO' on page 309 undefined on input l ine 1350. LaTeX Warning: Reference `sec:consensus' on page 309 undefined on input line 13 60. LaTeX Warning: Reference `sec:pssm' on page 309 undefined on input line 1361. LaTeX Warning: Reference `sec:getting_info_content' on page 309 undefined on in put line 1362. LaTeX Warning: Reference `sec:sub_matrix' on page 309 undefined on input line 1 363. LaTeX Warning: Reference `sec:summary_info' on page 309 undefined on input line 1369. [309 <./images/SRR001666.png>] [310] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [311] LaTeX Warning: Reference `sec:summary_info' on page 312 undefined on input line 1497. LaTeX Warning: Reference `sec:freq_table' on page 312 undefined on input line 1 516. [312] LaTeX Warning: Reference `sec:align_clustal' on page 313 undefined on input lin e 1603. LaTeX Warning: Reference `sec:summary_info' on page 313 undefined on input line 1603. [313] LaTeX Warning: Reference `chapter:Bio.SeqIO' on page 314 undefined on input lin e 1701. [314]) [315] (./Tutorial/chapter_testing.tex Chapter 21. LaTeX Warning: Reference `section:doctest' on page 316 undefined on input line 49. [316] [317] [318] [319] [320] [321] LaTeX Warning: Reference `section:doctest' on page 322 undefined on input line 409. [322] (/usr/share/texlive/texmf-dist/tex/latex/base/omlcmr.fd)) [323] (./Tutorial/chapter_advanced.tex Chapter 22. [324] [325] LaTeX Warning: Reference `sec:freq_table' on page 326 undefined on input line 1 63. Overfull \hbox (30.74179pt too wide) in paragraph at lines 198--199 [][][]\OT1/cmtt/m/n/10 factor[]\OT1/cmr/m/n/10 : fac-tor used to mul-ti-ply the log-odds val-ues. Each en-try is gen-er-ated by log(LOM[key])*factor [326] [327]) [328] (./Tutorial/chapter_contributing.tex Chapter 23. LaTeX Warning: Reference `chapter:cookbook' on page 329 undefined on input line 31. [329] LaTeX Warning: Reference `sec:regr_test' on page 330 undefined on input line 84 . LaTeX Warning: Reference `sec:regr_test' on page 330 undefined on input line 10 0. [330]) [331] (./Tutorial/chapter_appendix.tex Chapter 24. [332] LaTeX Warning: Reference `sec:SeqIO_compressed' on page 333 undefined on input line 88. ) [333] [334] [335] [336] (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) Package rerunfilecheck Warning: File `Tutorial.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (337 pages, 2428292 bytes). Transcript written on Tutorial.log. pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 65. (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Tutorial.out) (./Tutorial.out) Excluding 'htmlonly' comment. Excluding 'rawhtml' comment. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.m ap} <./images/biopython_logo.pdf>] (./Tutorial.tocpdfTeX warning (ext4): destin ation with the same identifier (name{page.1}) has been already used, duplicate ignored \relax l.39 ...tions and locations}{33}{subsection.4.3.2} % [1] [2] [3] [4] [5] [6] [7]) [8] (./Tutorial/chapter_introduction.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [9] [10] Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [11 <./images/biopython_logo_old.jpg>] [12] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . [13]) [14] (./Tutorial/chapter_quick_start.tex Chapter 2. [15] [16] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [17] [18]) [19] (./Tutorial/chapter_seq_objects.tex Chapter 3. [20] [21] [22] [23] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33]) [34] (./Tutorial/chapter_seq_annot.tex Chapter 4. [35] [36] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [37] Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [38] [39] [40] [41] [42] Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [43] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] [44] Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [45] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [46] Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] [47] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [48] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [49] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [50] (./Tutorial/chapter_seqio.tex Chapter 5. [51] Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] [52] [53] [54] [55] [56] Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [57] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [58] [59] Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [60] [61] Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [62] Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [63] [64] [65] [66] [67] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [68] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [69] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator ) [70] (./Tutorial/chapter_align.tex Chapter 6. [71] [72] [73] [74] [75] [76] [77] [78] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [79] [80] [81] Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [82] [83] [84] [85] [86] [87] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [88] [89] [90] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [91] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [92] [93] [94] [95] [96] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [97] [98] [99] [100] [101] Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [102] [103]) [104] (./Tutorial/chapter_blast.tex Chapter 7. [105] [106] [107] LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 108 undefined o n input line 268. [108] [109] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [110] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment.) [111] [112 <./images/BlastRecord.png>] [113 <./images/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [114] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [115] [116] [117] [118] [119] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [120] [121] [122] [123] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [124] [125] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [126] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [127] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [128] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [129]) [130] (./Tutorial/chapter_entrez.tex Chapter 9. [131] [132] [133] [134] Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] [135] [136] [137] [138] Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [139] [140] [141] [142] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [143] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [144] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] [145] [146] [147] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [148] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [149] [150] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [151] [152] [153] [154] [155] [156] [157]) [158] (./Tutorial/chapter_uniprot.tex Chapter 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] [159] Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [160] [161] [162] [163] [164] [165] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [166] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [167]) [168] (./Tutorial/chapter_pdb.tex Chapter 11. [169] [170] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [171] Excluding 'htmlonly' comment. [172] [173 <./images/smcra.png (PNG copy)>] [174] [175] [176] [177] [178] [179] [180] [181] [182] LaTeX Warning: Command \r invalid in math mode on input line 901. [183] [184] [185] [186] [187]) [188] (./Tutorial/chapter_popgen.tex Chapter 12. [189]) [190] (./Tutorial/chapter_phylo.tex Chapter 13. [191] Excluding 'htmlonly' comment. [192] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor [193 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [194 <./im ages/phylo-color-draw.png>] [195] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [196] [197 <./images/phylo-draw-example.png> <./i mages/phylo-dot.png>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [198 <./images/phylo-rooted.png> <./images/phylo- color.png>] [199 <./images/phylo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [200] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [201] [202] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- [203] [204]) [205] (./Tutorial/chapter_motifs.tex Chapter 14. [206] [207] [208] [209] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [210] [211] [212] [213] [214] [215] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [216] [217] [218] LaTeX Warning: `h' float specifier changed to `ht'. [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230]) [231] (./Tutorial/chapter_cluster.tex Chapter 15. [232] [233] [234] [235] [236] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [237] [238] [239] [240] [241] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [242] [243] [244] [245] [246] Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [247] Overfull \hbox (175.98935pt too wide) in paragraph at lines 707--707 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserco ntent.com/biopython/biopython/master/Tests/Cluster/cyano.txt"))[] Overfull \hbox (97.24004pt too wide) in paragraph at lines 715--715 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/biop ython/biopython/master/Tests/Cluster/cyano.txt")[] [248] Overfull \hbox (25.39864pt too wide) in paragraph at lines 740--751 [] [249] [250] [251] [252] Overfull \hbox (106.77225pt too wide) in paragraph at lines 930--932 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [253]) Overfull \hbox (26.21434pt too wide) in paragraph at lines 986--111 []\OT1/cmr/m/n/10 This will cre-ate the files [][]\OT1/cmtt/m/n/10 cyano_result _K_G2_A2.cdt[]\OT1/cmr/m/n/10 , [][]\OT1/cmtt/m/n/10 cyano_result_K_G2.kgg[]\OT 1/cmr/m/n/10 , and [][]\OT1/cmtt/m/n/10 cyano_result_K_A2.kag[]\OT1/cmr/m/n/10 . [254] (./Tutorial/chapter_learning.tex Chapter 16. [255] [256] [257] [258] [259] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. [260] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. [261] [262]) [263] (./Tutorial/chapter_graphics.tex Chapter 17. [264] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [265] [266 <./images/plasmid_linear.png (PNG copy)> <./images/plasmid_circular.png (P NG copy)>] [267] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [268] [269 <./images/GD_sigil_labels.png (PNG copy)>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [270] [271 <./images/GD_sigils.png>] [272 <./imag es/GD_sigil_arrow_shafts.png>] Excluding 'htmlonly' comment. [273 <./images/GD_ sigil_arrow_heads.png>] [274] Excluding 'htmlonly' comment. [275 <./images/plas mid_linear_nice.png (PNG copy)>] [276 <./images/plasmid_circular_nice.png>] Overfull \hbox (2.74086pt too wide) in paragraph at lines 605--605 []\OT1/cmtt/m/n/10 A_colors = [red]*5 + [grey]*7 + [orange]*2 + [grey]*2 + [ora nge] + [grey]*11 + [green]*4 \[] [277] Excluding 'htmlonly' comment. [278 <./images/three_track_simple.png>] [279] Overfull \hbox (28.99063pt too wide) in paragraph at lines 782--782 [] \OT1/cmtt/m/n/10 color = colors.linearlyInterpolatedColor(colors.whit e, colors.firebrick, 0, 100, score)[] Overfull \hbox (2.65141pt too wide) in paragraph at lines 784--790 []\OT1/cmr/m/n/10 There are sev-eral im-por-tant pieces to this code. First the [][]\OT1/cmtt/m/n/10 GenomeDiagram []\OT1/cmr/m/n/10 ob-ject has a [][]\OT1/cm tt/m/n/10 cross_track_links Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [280] [281 <./image s/three_track_cl.png>] [282 <./images/three_track_cl2a.png>] [283] [284 <./imag es/simple_chrom.pdf> <./images/tRNA_chrom.pdf>] [285] Excluding 'htmlonly' comment. [286] Excluding 'htmlonly' comment.) [287] (./Tutorial/chapter_kegg.tex Chapter 18. [288] [289]) [290] (./Tutorial/chapter_phenotype.tex Chapter 19. [291] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['A12']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['B01'], WellReco rd['C01'], ..., WellRecord['H01']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['C03']')[] [292] [293] [294]) [295] (./Tutorial/chapter_cookbook.tex Chapter 20. [296] [297] [298] [299] [300] [301] Overfull \hbox (5.83499pt too wide) in paragraph at lines 426--430 \OT1/cmr/m/n/10 mat (e.g. FASTA files). How-ever, for large FASTQ files it woul d be faster the low-level [][]\OT1/cmtt/m/n/10 FastqGeneralIterator Overfull \hbox (4.57849pt too wide) in paragraph at lines 444--446 \OT1/cmr/m/n/10 That should find $13819$ reads from \OT1/cmtt/m/n/10 SRR014849. fastq \OT1/cmr/m/n/10 and save them to a new FASTQ file, \OT1/cmtt/m/n/10 with[ ]primer.fastq\OT1/cmr/m/n/10 . [302] [303] [304] [305] Overfull \hbox (7.99081pt too wide) in paragraph at lines 765--765 []\OT1/cmtt/m/n/10 Seq('GTCCCAGTATTCGGATTTGTCTGCCAAAACAATGAAATTGACACAGTTTACAAC. ..CCG', SingleLetterAlphabet())[] [306] [307] [308] [309] Excluding 'htmlonly' comment. Overfull \hbox (4.00363pt too wide) in paragraph at lines 1057--1060 []\OT1/cmr/m/it/10 Tip: \OT1/cmr/m/n/10 Rather than us-ing [][]\OT1/cmtt/m/n/10 pylab.show() []\OT1/cmr/m/n/10 to show the plot in a win-dow, you can also use [][]\OT1/cmtt/m/n/10 pylab.savefig(...) [310] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [311 <./image s/hist_plot.png>] [312 <./images/gc_plot.png>] Excluding 'htmlonly' comment. [313 <./images/dot_plot.png>] Excluding 'htmlonly' comment. [314] Excluding 'htmlonly' comment. [315 <./images/dot_plot_scatter.png>] [316 <./ima ges/SRR001666.png>] [317] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [318] [319] [320] [321]) [322] (./Tutorial/chapter_testing.tex Chapter 21. [323] [324] [325] [326] [327] [328] [329] (/usr/share/texlive/texmf-dist/tex/latex/base/omlcmr.fd)) [330] (./Tutorial/chapter_advanced.tex Chapter 22. [331] [332] Overfull \hbox (30.74179pt too wide) in paragraph at lines 198--199 [][][]\OT1/cmtt/m/n/10 factor[]\OT1/cmr/m/n/10 : fac-tor used to mul-ti-ply the log-odds val-ues. Each en-try is gen-er-ated by log(LOM[key])*factor [333] [334]) [335] (./Tutorial/chapter_contributing.tex Chapter 23. [336] [337]) [338] (./Tutorial/chapter_appendix.tex Chapter 24. [339]) [340] [341] [342] [343] (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (344 pages, 2486423 bytes). Transcript written on Tutorial.log. pdflatex Tutorial.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Tutorial.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 65. (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Tutorial.out) (./Tutorial.out) Excluding 'htmlonly' comment. Excluding 'rawhtml' comment. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.m ap} <./images/biopython_logo.pdf>] (./Tutorial.tocpdfTeX warning (ext4): destin ation with the same identifier (name{page.1}) has been already used, duplicate ignored \relax l.39 ...tions and locations}{40}{subsection.4.3.2} % [1] [2] [3] [4] [5] [6] [7]) [8] (./Tutorial/chapter_introduction.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [9] [10] Excluding 'rawhtml' comment. Underfull \hbox (badness 10000) in paragraph at lines 141--147 Underfull \hbox (badness 10000) in paragraph at lines 153--155 [11 <./images/biopython_logo_old.jpg>] [12] Overfull \hbox (2.99303pt too wide) in paragraph at lines 246--248 \OT1/cmr/m/n/10 Check the built in doc-strings (\OT1/cmtt/m/n/10 from Bio impor t SeqIO\OT1/cmr/m/n/10 , then \OT1/cmtt/m/n/10 help(SeqIO)\OT1/cmr/m/n/10 ), or see [][]$\OT1/cmtt/m/n/10 http : / / biopython . [13]) [14] (./Tutorial/chapter_quick_start.tex Chapter 2. [15] [16] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGATGAGACCGTGG. ..CGC', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 117--117 []\OT1/cmtt/m/n/10 Seq('CATTGTTGAGATCACATAATAATTGATCGAGTTAATCTGGAGGATCTGTTTACT. ..GCC', SingleLetterAlphabet())[] [17] [18]) [19] (./Tutorial/chapter_seq_objects.tex Chapter 3. [20] [21] [22] [23] Overfull \hbox (39.49054pt too wide) in paragraph at lines 274--274 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] Overfull \hbox (39.49054pt too wide) in paragraph at lines 285--285 []\OT1/cmtt/m/n/10 >>> list_of_seqs = [Seq("ACGT", generic_dna), Seq("AACC", ge neric_dna), Seq("GGTT", generic_dna)][] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33]) [34] (./Tutorial/chapter_seq_annot.tex Chapter 4. [35] [36] Overfull \hbox (2.74086pt too wide) in paragraph at lines 129--129 []\OT1/cmtt/m/n/10 >gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence[] Overfull \hbox (34.24059pt too wide) in paragraph at lines 144--144 []\OT1/cmtt/m/n/10 SingleLetterAlphabet()), id='gi|45478711|ref|NC_005816.1|', name='gi|45478711|ref|NC_005816.1|',[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 153--153 []\OT1/cmtt/m/n/10 Seq('TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGG. ..CTG', SingleLetterAlphabet())[] Overfull \hbox (7.99081pt too wide) in paragraph at lines 169--169 []\OT1/cmtt/m/n/10 'gi|45478711|ref|NC_005816.1| Yersinia pestis biovar Microtu s ... pPCP1, complete sequence'[] [37] Overfull \hbox (7.99081pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [38] [39] [40] [41] [42] Overfull \hbox (44.7405pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 >>> example_parent = Seq("ACCGAGACGGCAAAGGCTAGCATAGGTATGAGAC TTCCTTCCTGCCAGTGCTGAGGAACTGGGAGCCTAC")[] Overfull \hbox (128.73976pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 >>> feature_seq = example_parent[example_feature.location.st art:example_feature.location.end].reverse_complement()[] [43] Overfull \hbox (165.48944pt too wide) in paragraph at lines 618--618 []\OT1/cmtt/m/n/10 NotImplementedError: SeqRecord comparison is deliberately no t implemented. Explicitly compare the attributes of interest.[] [44] Overfull \hbox (2.74086pt too wide) in paragraph at lines 703--703 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence',[] [45] Overfull \hbox (7.99081pt too wide) in paragraph at lines 762--762 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [46] Overfull \hbox (39.49054pt too wide) in paragraph at lines 839--839 []\OT1/cmtt/m/n/10 >>> sub_record.description = "Yersinia pestis biovar Microtu s str. 91001 plasmid pPCP1, partial."[] [47] Overfull \hbox (7.99081pt too wide) in paragraph at lines 930--930 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [48] Overfull \hbox (7.99081pt too wide) in paragraph at lines 960--960 []\OT1/cmtt/m/n/10 description='Yersinia pestis biovar Microtus str. 91001 plas mid pPCP1, complete sequence.',[] [49] Overfull \hbox (170.7394pt too wide) in paragraph at lines 1032--1032 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (record.id, len(record), len(re cord.features), len(record.dbxrefs), len(record.annotations)))[] Overfull \hbox (65.74031pt too wide) in paragraph at lines 1042--1042 []\OT1/cmtt/m/n/10 >>> print("%s %i %i %i %i" % (rc.id, len(rc), len(rc.feature s), len(rc.dbxrefs), len(rc.annotations)))[] ) [50] (./Tutorial/chapter_seqio.tex Chapter 5. [51] Overfull \hbox (7.99081pt too wide) in paragraph at lines 66--66 []\OT1/cmtt/m/n/10 >>> identifiers = [seq_record.id for seq_record in SeqIO.par se("ls_orchid.gbk", "genbank")][] [52] [53] [54] [55] [56] Overfull \hbox (18.49072pt too wide) in paragraph at lines 391--391 []\OT1/cmtt/m/n/10 with Entrez.efetch(db="nucleotide", rettype="fasta", retmode ="text", id="6273291") as handle:[] [57] Overfull \hbox (23.74068pt too wide) in paragraph at lines 438--438 [] \OT1/cmtt/m/n/10 % (len(seq_record), len(seq_record.features), seq_record.annotations["source"]))[] Overfull \hbox (18.49072pt too wide) in paragraph at lines 482--482 []\OT1/cmtt/m/n/10 RecName: Full=Chalcone synthase 3; EC=2.3.1.74; AltName: Ful l=Naringenin-chalcone synthase 3;[] [58] [59] Overfull \hbox (34.24059pt too wide) in paragraph at lines 609--609 []\OT1/cmtt/m/n/10 orchid_dict = SeqIO.to_dict(SeqIO.parse("ls_orchid.fasta", " fasta"), key_function=get_accession)[] [60] [61] Overfull \hbox (9.93459pt too wide) in paragraph at lines 769--774 \OT1/cmr/m/n/10 FTP site ([][]$\OT1/cmtt/m/n/10 ftp : / / ftp . uniprot . org / pub / databases / uniprot / current _ release / knowledgebase / complete / [62] Overfull \hbox (4.48064pt too wide) in paragraph at lines 812--815 []\OT1/cmr/m/n/10 As of Gen-Bank re-lease $210$, there are $38$ files mak-ing u p the vi-ral se-quences, \OT1/cmtt/m/n/10 gbvrl1.seq\OT1/cmr/m/n/10 , ..., \OT1 /cmtt/m/n/10 gbvrl38.seq\OT1/cmr/m/n/10 , [63] [64] [65] [66] [67] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1174--1174 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1184--1184 []\OT1/cmtt/m/n/10 >>> records = [rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1192--1192 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] [68] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1203--1203 []\OT1/cmtt/m/n/10 >>> records = (rec.reverse_complement(id="rc_"+rec.id, descr iption = "reverse complement") \[] Overfull \hbox (19.46596pt too wide) in paragraph at lines 1240--1242 \OT1/cmr/m/n/10 Making a sin-gle call to [][]\OT1/cmtt/m/n/10 SeqIO.write(...) []\OT1/cmr/m/n/10 is also much quicker than mul-ti-ple calls to the [][]\OT1/cm tt/m/n/10 SeqRecord.format(...) [69] Overfull \hbox (21.32593pt too wide) in paragraph at lines 1284--1288 []\OT1/cmr/m/n/10 Likewise, when pars-ing FASTQ files, in-ter-nally [][]\OT1/cm tt/m/n/10 Bio.SeqIO.parse() []\OT1/cmr/m/n/10 calls the low-level [][]\OT1/cmtt /m/n/10 FastqGeneralIterator ) [70] (./Tutorial/chapter_align.tex Chapter 6. [71] [72] [73] [74] [75] [76] [77] [78] Overfull \hbox (5.54102pt too wide) in paragraph at lines 435--436 \OT1/cmr/m/n/10 ever you can't do that when your records come from a gen-er-a-t or/it-er-a-tor. There-fore the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() Overfull \hbox (39.68698pt too wide) in paragraph at lines 443--448 [][]\OT1/cmtt/m/n/10 Bio.AlignIO.parse() []\OT1/cmr/m/n/10 and then save them u s-ing the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write() []\OT1/cmr/m/n/10 -- or just use the [][]\OT1/cmtt/m/n/10 Bio.AlignIO.convert() [79] [80] [81] Overfull \hbox (16.49278pt too wide) in paragraph at lines 619--622 []\OT1/cmr/m/n/10 Internally the [][]\OT1/cmtt/m/n/10 format() []\OT1/cmr/m/n/1 0 method is us-ing the [][]\OT1/cmtt/m/n/10 StringIO []\OT1/cmr/m/n/10 string b ased han-dle and call-ing [][]\OT1/cmtt/m/n/10 Bio.AlignIO.write()[]\OT1/cmr/m/ n/10 . [82] [83] [84] [85] [86] [87] Overfull \hbox (8.40039pt too wide) in paragraph at lines 1057--1061 []\OT1/cmr/m/n/10 By de-fault MUS-CLE will out-put the align-ment as a FASTA fi le (us-ing gapped se-quences). The [][]\OT1/cmtt/m/n/10 Bio.AlignIO [88] [89] [90] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1316--1316 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [91] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1364--1364 []\OT1/cmtt/m/n/10 needle -outfile=needle.txt -asequence=alpha.faa -bsequence=b eta.faa -gapopen=10 -gapextend=0.5[] [92] [93] [94] [95] [96] Overfull \hbox (175.46193pt too wide) in paragraph at lines 1776--1813 [][] [97] [98] [99] [100] [101] Overfull \hbox (19.80069pt too wide) in paragraph at lines 2013--2014 \OT1/cmr/m/n/10 In this ex-am-ple, the to-tal num-ber of op-ti-mal align-ments is huge (more than $4 \OMS/cmsy/m/n/10 ^^B \OT1/cmr/m/n/10 10[]$), and call-ing [][]\OT1/cmtt/m/n/10 len(alignments) [102] [103]) [104] (./Tutorial/chapter_blast.tex Chapter 7. [105] [106] [107] LaTeX Warning: Reference `sec:parsing-blast-deprecated' on page 108 undefined o n input line 268. [108] [109] Overfull \hbox (55.2404pt too wide) in paragraph at lines 436--436 []\OT1/cmtt/m/n/10 sequence: >gb|AF283004.1|AF283004 Arabidopsis thaliana cold acclimation protein WCOR413-like protein[] [110] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment.) [111] [112 <./images/BlastRecord.png>] [113 <./images/PSIBlastRecord.png>] (./Tutorial/chapter_searchio.tex Chapter 8. [114] Overfull \hbox (2.9019pt too wide) in paragraph at lines 85--93 [][][]\OT1/cmtt/m/n/10 HSPFragment[]\OT1/cmr/m/n/10 , to rep-re-sent a sin-gle con-tigu-ous align-ment be-tween query and hit se-quences. [][]\OT1/cmtt/m/n/10 HSPFragment Overfull \hbox (8.43927pt too wide) in paragraph at lines 105--107 [][][]\OT1/cmtt/m/n/10 parse []\OT1/cmr/m/n/10 is used for search out-put files with mul-ti-ple queries and re-turns a gen-er-a-tor that yields [][]\OT1/cmtt/ m/n/10 QueryResult [115] [116] [117] [118] [119] Overfull \hbox (44.7405pt too wide) in paragraph at lines 462--462 []\OT1/cmtt/m/n/10 ... hit.id = hit.id.split("|")[3] # renames "gi|301171 322|ref|NR_035857.1|" to "NR_035857.1"[] [120] [121] [122] [123] Overfull \hbox (469.98679pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='42291', name='aligned query sequence' , description='mystery_seq', dbxrefs=[])[] Overfull \hbox (769.23418pt too wide) in paragraph at lines 731--731 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] Overfull \hbox (27.24287pt too wide) in paragraph at lines 738--740 []\OT1/cmr/m/n/10 It should not sur-prise you now that the [][]\OT1/cmtt/m/n/10 HSP []\OT1/cmr/m/n/10 ob-ject has an [][]\OT1/cmtt/m/n/10 alignment []\OT1/cmr /m/n/10 prop-erty which is a [][]\OT1/cmtt/m/n/10 MultipleSeqAlignment [124] [125] Overfull \hbox (65.74031pt too wide) in paragraph at lines 870--870 []\OT1/cmtt/m/n/10 >>> blat_hsp2.hit_inter_ranges # start and end coordinates of intervening regions in the hit sequence[] [126] Overfull \hbox (769.23418pt too wide) in paragraph at lines 962--962 []\OT1/cmtt/m/n/10 SeqRecord(seq=Seq('CCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGA AAGTGCTTCCTTT...GGG', DNAAlphabet()), id='gi|262205317|ref|NR_030195.1|', name= 'aligned hit sequence', description='Homo sapiens microRNA 520b (MIR520B), micr oRNA', dbxrefs=[])[] [127] Overfull \hbox (14.20721pt too wide) in paragraph at lines 1050--1054 \OT1/cmr/m/n/10 func-tion re-turns a gen-er-a-tor ob-ject that yields a [][]\OT 1/cmtt/m/n/10 QueryResult []\OT1/cmr/m/n/10 ob-ject in each it-er-a-tion. Like [][]\OT1/cmtt/m/n/10 Bio.SearchIO.read[]\OT1/cmr/m/n/10 , Overfull \hbox (20.13245pt too wide) in paragraph at lines 1080--1085 []\OT1/cmr/m/n/10 In this case, the ideal choice would be to in-dex the file us -ing [][]\OT1/cmtt/m/n/10 Bio.SearchIO.index []\OT1/cmr/m/n/10 or [][]\OT1/cmtt /m/n/10 Bio.SearchIO.index_db[]\OT1/cmr/m/n/10 . [128] Overfull \hbox (13.24077pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 >>> idx = SearchIO.index("tab_2226_tblastn_001.txt", "blast- tab", key_function=key_function)[] Overfull \hbox (11.82602pt too wide) in paragraph at lines 1160--1163 []\OT1/cmr/m/n/10 Finally, [][]\OT1/cmtt/m/n/10 Bio.SearchIO []\OT1/cmr/m/n/10 also pro-vides a [][]\OT1/cmtt/m/n/10 convert []\OT1/cmr/m/n/10 func-tion, whic h is sim-ply a short-cut for [][]\OT1/cmtt/m/n/10 Bio.SearchIO.parse [129]) [130] (./Tutorial/chapter_entrez.tex Chapter 9. [131] [132] [133] [134] Overfull \hbox (70.99026pt too wide) in paragraph at lines 224--224 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae[Orgn] AND matK[Gene]", idtype="acc")[] [135] [136] [137] [138] Overfull \hbox (13.24077pt too wide) in paragraph at lines 450--450 [] \OT1/cmtt/m/n/10 net_handle = Entrez.efetch(db="nucleotide", id="EU490707 ", rettype="gb", retmode="text")[] [139] [140] [141] [142] Overfull \hbox (312.48816pt too wide) in paragraph at lines 677--677 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.NotXMLError: Failed to parse the XML data (syntax error: line 1, column 0). Please make sure that the input data are in X ML format.[] [143] Overfull \hbox (249.48871pt too wide) in paragraph at lines 698--698 []\OT1/cmtt/m/n/10 [] Overfull \hbox (370.23766pt too wide) in paragraph at lines 705--705 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.CorruptedXMLError: Failed to parse the XML data (no element found: line 16, column 0). Please make sure that the input da ta are not corrupted.[] Overfull \hbox (249.48871pt too wide) in paragraph at lines 736--736 []\OT1/cmtt/m/n/10 [] [144] Overfull \hbox (585.48578pt too wide) in paragraph at lines 748--748 []\OT1/cmtt/m/n/10 Bio.Entrez.Parser.ValidationError: Failed to find tag 'Docsu mList' in the DTD. To skip all tags that are not represented in the DTD, please call Bio.Entrez.read or Bio.Entrez.parse with validate=False.[] [145] [146] [147] Overfull \hbox (133.98972pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 EXPRESS bone| connective tissue| intestine| liver| live r tumor| normal| soft tissue/muscle tissue tumor| adult[] Overfull \hbox (102.48999pt too wide) in paragraph at lines 970--970 []\OT1/cmtt/m/n/10 SEQUENCE ACC=BG569293.1; NID=g13576946; CLONE=IMAGE:47225 96; END=5'; LID=6989; SEQTYPE=EST; TRACE=44157214[] [148] Overfull \hbox (160.23949pt too wide) in paragraph at lines 992--992 []\OT1/cmtt/m/n/10 ['bone', 'connective tissue', 'intestine', 'liver', 'liver t umor', 'normal', 'soft tissue/muscle tissue tumor', 'adult'][] [149] [150] Overfull \hbox (23.74068pt too wide) in paragraph at lines 1152--1152 []\OT1/cmtt/m/n/10 >>> handle = Entrez.esearch(db="nucleotide", term="Cypripedi oideae", retmax=814, idtype="acc")[] [151] [152] [153] [154] [155] [156] [157]) [158] (./Tutorial/chapter_uniprot.tex Chapter 10. Overfull \hbox (216.73924pt too wide) in paragraph at lines 30--30 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserc ontent.com/biopython/biopython/master/Tests/SwissProt/F2CXE6.txt"))[] Overfull \hbox (137.98993pt too wide) in paragraph at lines 39--39 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/bio python/biopython/master/Tests/SwissProt/F2CXE6.txt")[] [159] Overfull \hbox (270.48853pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 SubName: Full=Plasma membrane intrinsic protein {ECO:0000313 |EMBL:BAN04711.1}; SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ87517.1 };[] Overfull \hbox (359.73775pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 authors: Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamo ri H., Kurita K., Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K ., Itoh T., Sato K.[] Overfull \hbox (86.74013pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Comprehensive sequence analysis of 24,783 barley full -length cDNAs derived from 12 clone libraries.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (7.99081pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 title: Functional characterization of a novel plasma membran e intrinsic protein2 in barley.[] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] Overfull \hbox (553.98605pt too wide) in paragraph at lines 79--79 []\OT1/cmtt/m/n/10 ['Eukaryota', 'Viridiplantae', 'Streptophyta', 'Embryophyta' , 'Tracheophyta', 'Spermatophyta', 'Magnoliophyta', 'Liliopsida', 'Poales', 'Po aceae', 'BEP clade', 'Pooideae', 'Triticeae', 'Hordeum'][] [160] [161] [162] [163] [164] [165] Overfull \hbox (24.29903pt too wide) in paragraph at lines 366--367 []\OT1/cmr/m/n/10 If the ac-ces-sion num-ber you pro-vided to [][]\OT1/cmtt/m/n /10 ExPASy.get_sprot_raw []\OT1/cmr/m/n/10 does not ex-ist, then [][]\OT1/cmtt/ m/n/10 SwissProt.read(handle) Overfull \hbox (65.93893pt too wide) in paragraph at lines 409--410 []\OT1/cmr/m/n/10 The same func-tion can be used to re-trieve a Prosite doc-u-m en-ta-tion record and parse it into a [][]\OT1/cmtt/m/n/10 Bio.ExPASy.Prodoc.Re cord [166] Overfull \hbox (133.98972pt too wide) in paragraph at lines 493--493 []\OT1/cmtt/m/n/10 {'signature_ac': u'PS50948', 'level': u'0', 'stop': 98, 'seq uence_ac': u'USERSEQ1', 'start': 16, 'score': u'8.873'}[] [167]) [168] (./Tutorial/chapter_pdb.tex Chapter 11. [169] [170] Overfull \hbox (13.022pt too wide) in paragraph at lines 194--196 \OT1/cmr/m/n/10 The over-all lay-out of a \OT1/cmtt/m/n/10 Structure \OT1/cmr/m /n/10 ob-ject fol-lows the so-called SM-CRA (Struc-ture/-Mod-el/Chain/Residue/A tom) [171] Excluding 'htmlonly' comment. [172] [173 <./images/smcra.png (PNG copy)>] [174] [175] [176] [177] [178] [179] [180] [181] [182] LaTeX Warning: Command \r invalid in math mode on input line 901. [183] [184] [185] [186] [187]) [188] (./Tutorial/chapter_popgen.tex Chapter 12. [189]) [190] (./Tutorial/chapter_phylo.tex Chapter 13. [191] Excluding 'htmlonly' comment. [192] Overfull \hbox (25.13162pt too wide) in paragraph at lines 175--178 []\OT1/cmr/m/n/10 Let's tar-get the most re-cent com-mon an-ces-tor (MRCA) of t he nodes named ``E'' and ``F''. The [][]\OT1/cmtt/m/n/10 common_ancestor [193 <./images/phylo-simple-draw.png>] Excluding 'htmlonly' comment. [194 <./im ages/phylo-color-draw.png>] [195] Overfull \hbox (406.98734pt too wide) in paragraph at lines 328--328 []\OT1/cmtt/m/n/10 Phylogeny(description='phyloXML allows to use either a "bran ch_length" attribute...', name='example from Prof. Joe Felsenstein's book "Infe rring Phyl...', rooted=True)[] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [196] [197 <./images/phylo-draw-example.png> <./i mages/phylo-dot.png>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [198 <./images/phylo-rooted.png> <./images/phylo- color.png>] [199 <./images/phylo-apaf.png> <./images/phylo-apaf-zoom.png>] Overfull \hbox (19.85507pt too wide) in paragraph at lines 559--566 \OT1/cmr/m/n/10 For ex-am-ple, in a tree with clade names Foo1, Foo2 and Foo3, [][]\OT1/cmtt/m/n/10 tree.find_clades({"name": "Foo1"}) [200] Overfull \hbox (13.48741pt too wide) in paragraph at lines 614--617 []\OT1/cmr/m/n/10 Find each clade con-tain-ing a match-ing el-e-ment. That is, find each el-e-ment as with [][]\OT1/cmtt/m/n/10 find_elements[]\OT1/cmr/m/n/10 , [201] [202] Overfull \hbox (4.04672pt too wide) in paragraph at lines 825--828 []\OT1/cmr/m/n/10 A sim-i-lar wrap-per for RAxML ([][]$\OT1/cmtt/m/n/10 https : / / sco . h-[]its . org / exelixis / software . html$[][]\OT1/cmr/m/n/10 ) was added in Biopy- [203] [204]) [205] (./Tutorial/chapter_motifs.tex Chapter 14. [206] [207] [208] [209] Overfull \hbox (128.73976pt too wide) in paragraph at lines 270--270 []\OT1/cmtt/m/n/10 [Seq('CACGTG', IUPACUnambiguousDNA()), Seq('CACGTG', IUPACUn ambiguousDNA()), Seq('CACGTG', IUPACUnambiguousDNA())][] [210] [211] [212] [213] [214] [215] Overfull \hbox (13.10551pt too wide) in paragraph at lines 582--586 \OT1/cmr/m/n/10 The [][]\OT1/cmtt/m/n/10 motifs.parse []\OT1/cmr/m/n/10 com-man d reads the com-plete file di-rectly, so you can close the file af-ter call-ing [][]\OT1/cmtt/m/n/10 motifs.parse[]\OT1/cmr/m/n/10 . [216] [217] [218] LaTeX Warning: `h' float specifier changed to `ht'. [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230]) [231] (./Tutorial/chapter_cluster.tex Chapter 15. [232] [233] [234] [235] [236] Overfull \hbox (78.60634pt too wide) in paragraph at lines 230--231 \OT1/cmr/m/n/10 men-sions of these ar-rays are $[]$ if [][]\OT1/cmtt/m/n/10 tra nspose []\OT1/cmr/m/n/10 is [][]\OT1/cmtt/m/n/10 0[]\OT1/cmr/m/n/10 , or $[]$ [237] [238] [239] [240] [241] Overfull \hbox (16.73593pt too wide) in paragraph at lines 413--414 [][]\OT1/cmtt/m/n/10 distance []\OT1/cmr/m/n/10 is the dis-tance be-tween them. The items be-ing clus-tered are num-bered from 0 to $[]$, [242] [243] [244] [245] [246] Overfull \hbox (106.77225pt too wide) in paragraph at lines 648--650 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [247] Overfull \hbox (175.98935pt too wide) in paragraph at lines 707--707 []\OT1/cmtt/m/n/10 >>> handle = TextIOWrapper(urlopen("https://raw.githubuserco ntent.com/biopython/biopython/master/Tests/Cluster/cyano.txt"))[] Overfull \hbox (97.24004pt too wide) in paragraph at lines 715--715 []\OT1/cmtt/m/n/10 >>> handle = urlopen("https://raw.githubusercontent.com/biop ython/biopython/master/Tests/Cluster/cyano.txt")[] [248] Overfull \hbox (25.39864pt too wide) in paragraph at lines 740--751 [] [249] [250] [251] [252] Overfull \hbox (106.77225pt too wide) in paragraph at lines 930--932 \OT1/cmr/m/n/10 An ar-ray with di-men-sions $[]$ if rows are be-ing clus-tered, or $[]$ [253]) Overfull \hbox (26.21434pt too wide) in paragraph at lines 986--111 []\OT1/cmr/m/n/10 This will cre-ate the files [][]\OT1/cmtt/m/n/10 cyano_result _K_G2_A2.cdt[]\OT1/cmr/m/n/10 , [][]\OT1/cmtt/m/n/10 cyano_result_K_G2.kgg[]\OT 1/cmr/m/n/10 , and [][]\OT1/cmtt/m/n/10 cyano_result_K_A2.kag[]\OT1/cmr/m/n/10 . [254] (./Tutorial/chapter_learning.tex Chapter 16. [255] [256] [257] [258] [259] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 278. [260] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 286. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 298. [261] [262]) [263] (./Tutorial/chapter_graphics.tex Chapter 17. [264] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [265] [266 <./images/plasmid_linear.png (PNG copy)> <./images/plasmid_circular.png (P NG copy)>] [267] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [268] [269 <./images/GD_sigil_labels.png (PNG copy)>] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [270] [271 <./images/GD_sigils.png>] [272 <./imag es/GD_sigil_arrow_shafts.png>] Excluding 'htmlonly' comment. [273 <./images/GD_ sigil_arrow_heads.png>] [274] Excluding 'htmlonly' comment. [275 <./images/plas mid_linear_nice.png (PNG copy)>] [276 <./images/plasmid_circular_nice.png>] Overfull \hbox (2.74086pt too wide) in paragraph at lines 605--605 []\OT1/cmtt/m/n/10 A_colors = [red]*5 + [grey]*7 + [orange]*2 + [grey]*2 + [ora nge] + [grey]*11 + [green]*4 \[] [277] Excluding 'htmlonly' comment. [278 <./images/three_track_simple.png>] [279] Overfull \hbox (28.99063pt too wide) in paragraph at lines 782--782 [] \OT1/cmtt/m/n/10 color = colors.linearlyInterpolatedColor(colors.whit e, colors.firebrick, 0, 100, score)[] Overfull \hbox (2.65141pt too wide) in paragraph at lines 784--790 []\OT1/cmr/m/n/10 There are sev-eral im-por-tant pieces to this code. First the [][]\OT1/cmtt/m/n/10 GenomeDiagram []\OT1/cmr/m/n/10 ob-ject has a [][]\OT1/cm tt/m/n/10 cross_track_links Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [280] [281 <./image s/three_track_cl.png>] [282 <./images/three_track_cl2a.png>] [283] [284 <./imag es/simple_chrom.pdf> <./images/tRNA_chrom.pdf>] [285] Excluding 'htmlonly' comment. [286] Excluding 'htmlonly' comment.) [287] (./Tutorial/chapter_kegg.tex Chapter 18. [288] [289]) [290] (./Tutorial/chapter_phenotype.tex Chapter 19. [291] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['A12']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['B01'], WellReco rd['C01'], ..., WellRecord['H01']')[] Overfull \hbox (48.7407pt too wide) in paragraph at lines 102--102 []\OT1/cmtt/m/n/10 PlateRecord('WellRecord['A01'], WellRecord['A02'], WellReco rd['A03'], ..., WellRecord['C03']')[] [292] [293] [294]) [295] (./Tutorial/chapter_cookbook.tex Chapter 20. [296] [297] [298] [299] [300] [301] Overfull \hbox (5.83499pt too wide) in paragraph at lines 426--430 \OT1/cmr/m/n/10 mat (e.g. FASTA files). How-ever, for large FASTQ files it woul d be faster the low-level [][]\OT1/cmtt/m/n/10 FastqGeneralIterator Overfull \hbox (4.57849pt too wide) in paragraph at lines 444--446 \OT1/cmr/m/n/10 That should find $13819$ reads from \OT1/cmtt/m/n/10 SRR014849. fastq \OT1/cmr/m/n/10 and save them to a new FASTQ file, \OT1/cmtt/m/n/10 with[ ]primer.fastq\OT1/cmr/m/n/10 . [302] [303] [304] [305] Overfull \hbox (7.99081pt too wide) in paragraph at lines 765--765 []\OT1/cmtt/m/n/10 Seq('GTCCCAGTATTCGGATTTGTCTGCCAAAACAATGAAATTGACACAGTTTACAAC. ..CCG', SingleLetterAlphabet())[] [306] [307] [308] [309] Excluding 'htmlonly' comment. Overfull \hbox (4.00363pt too wide) in paragraph at lines 1057--1060 []\OT1/cmr/m/it/10 Tip: \OT1/cmr/m/n/10 Rather than us-ing [][]\OT1/cmtt/m/n/10 pylab.show() []\OT1/cmr/m/n/10 to show the plot in a win-dow, you can also use [][]\OT1/cmtt/m/n/10 pylab.savefig(...) [310] Excluding 'htmlonly' comment. Excluding 'htmlonly' comment. [311 <./image s/hist_plot.png>] [312 <./images/gc_plot.png>] Excluding 'htmlonly' comment. [313 <./images/dot_plot.png>] Excluding 'htmlonly' comment. [314] Excluding 'htmlonly' comment. [315 <./images/dot_plot_scatter.png>] [316 <./ima ges/SRR001666.png>] [317] Overfull \hbox (49.0755pt too wide) in paragraph at lines 1460--1461 []\OT1/cmr/m/n/10 You can ac-cess any el-e-ment of the PSSM by sub-script-ing l ike [][]\OT1/cmtt/m/n/10 your_pssm[sequence_number][residue_count_name][]\OT1/c mr/m/n/10 . [318] [319] [320] [321]) [322] (./Tutorial/chapter_testing.tex Chapter 21. [323] [324] [325] [326] [327] [328] [329] (/usr/share/texlive/texmf-dist/tex/latex/base/omlcmr.fd)) [330] (./Tutorial/chapter_advanced.tex Chapter 22. [331] [332] Overfull \hbox (30.74179pt too wide) in paragraph at lines 198--199 [][][]\OT1/cmtt/m/n/10 factor[]\OT1/cmr/m/n/10 : fac-tor used to mul-ti-ply the log-odds val-ues. Each en-try is gen-er-ated by log(LOM[key])*factor [333] [334]) [335] (./Tutorial/chapter_contributing.tex Chapter 23. [336] [337]) [338] (./Tutorial/chapter_appendix.tex Chapter 24. [339]) [340] [341] [342] [343] (./Tutorial.aux (./Tutorial/chapter_introduction.aux) (./Tutorial/chapter_quick_start.aux) (./Tutorial/chapter_seq_objects.aux) (./Tutorial/chapter_seq_annot.aux) (./Tutorial/chapter_seqio.aux) (./Tutorial/chapter_align.aux) (./Tutorial/chapter_blast.aux) (./Tutorial/chapter_searchio.aux) (./Tutorial/chapter_entrez.aux) (./Tutorial/chapter_uniprot.aux) (./Tutorial/chapter_pdb.aux) (./Tutorial/chapter_popgen.aux) (./Tutorial/chapter_phylo.aux) (./Tutorial/chapter_motifs.aux) (./Tutorial/chapter_cluster.aux) (./Tutorial/chapter_learning.aux) (./Tutorial/chapter_graphics.aux) (./Tutorial/chapter_kegg.aux) (./Tutorial/chapter_phenotype.aux) (./Tutorial/chapter_cookbook.aux) (./Tutorial/chapter_testing.aux) (./Tutorial/chapter_advanced.aux) (./Tutorial/chapter_contributing.aux) (./Tutorial/chapter_appendix.aux)) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on Tutorial.pdf (344 pages, 2486417 bytes). Transcript written on Tutorial.log. pdflatex biopdb_faq.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./biopdb_faq.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/bookman.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/latin1.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 56. (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty (/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def) (/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def (/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def)))) No file biopdb_faq.aux. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pbk.fd) *geometry* driver: auto-detecting *geometry* detected driver: pdftex *geometry* verbose mode - [ preamble ] result: * driver: pdftex * paper: a4paper * layout: * layoutoffset:(h,v)=(0.0pt,0.0pt) * modes: * h-part:(L,W,R)=(89.62709pt, 418.25368pt, 89.6271pt) * v-part:(T,H,B)=(56.9055pt, 731.23584pt, 56.9055pt) * \paperwidth=597.50787pt * \paperheight=845.04684pt * \textwidth=418.25368pt * \textheight=731.23584pt * \oddsidemargin=17.3571pt * \evensidemargin=17.3571pt * \topmargin=-52.36449pt * \headheight=12.0pt * \headsep=25.0pt * \topskip=10.0pt * \footskip=30.0pt * \marginparwidth=65.0pt * \marginparsep=11.0pt * \columnsep=10.0pt * \skip\footins=9.0pt plus 4.0pt minus 2.0pt * \hoffset=0.0pt * \voffset=0.0pt * \mag=1000 * \@twocolumnfalse * \@twosidefalse * \@mparswitchfalse * \@reversemarginfalse * (1in=72.27pt=25.4mm, 1cm=28.453pt) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) Overfull \hbox (40.90678pt too wide) in paragraph at lines 112--119 []\T1/pbk/l/n/10 However, the [][]\T1/pcr/m/n/10 Bio.PDB.mmCIF.MMCIFlex []\T1/p bk/l/n/10 mod-ule (used in-ter-nally by [][]\T1/pcr/m/n/10 Bio.PDB.MMCIFParser [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspbk.fd) [2] Overfull \hbox (21.75009pt too wide) in paragraph at lines 257--262 \T1/pbk/l/n/10 file to their val-ues. If there are mul-ti-ple val-ues (like in the case of tag \T1/pcr/m/n/10 _atom_site.Cartn_y\T1/pbk/l/n/10 , [3] Overfull \hbox (13.9754pt too wide) in paragraph at lines 298--303 \T1/pbk/l/n/10 The avail-able keys are \T1/pcr/m/n/10 name, head, deposition_-d ate, release_-date, structure_- Overfull \hbox (11.71707pt too wide) in paragraph at lines 298--303 \T1/pcr/m/n/10 method, resolution, structure_-reference \T1/pbk/l/n/10 (maps to a list of ref-er-ences), \T1/pcr/m/n/10 journal_- LaTeX Warning: Reference `sub:The-Structure-object' on page 4 undefined on inpu t line 320. [4] [5] LaTeX Warning: Reference `cap:SMCRA' on page 6 undefined on input line 527. [6] [7 <./images/smcra.png (PNG copy)>] [8] LaTeX Warning: Reference `cap:SMCRA' on page 9 undefined on input line 729. LaTeX Warning: Reference `cap:SMCRA' on page 9 undefined on input line 758. LaTeX Warning: Reference `sub:Analysis' on page 9 undefined on input line 800. [9] LaTeX Warning: Reference `sub:Analysis' on page 10 undefined on input line 805. [10] Overfull \hbox (45.08351pt too wide) in paragraph at lines 960--964 \T1/pbk/l/n/10 Note that in the above case only model 0 of the struc-ture is co n-sid-ered by \T1/pcr/m/n/10 PolypeptideBuilder\T1/pbk/l/n/10 . Overfull \hbox (10.80998pt too wide) in paragraph at lines 968--973 \T1/pbk/l/n/10 try). The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide LaTeX Warning: Reference `cap:DSSP-codes' on page 11 undefined on input line 99 0. [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) Package rerunfilecheck Warning: File `biopdb_faq.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on biopdb_faq.pdf (15 pages, 162488 bytes). Transcript written on biopdb_faq.log. pdflatex biopdb_faq.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./biopdb_faq.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/bookman.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/latin1.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 56. (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty (/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def) (/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def (/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def)))) (./biopdb_faq.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pbk.fd) *geometry* driver: auto-detecting *geometry* detected driver: pdftex *geometry* verbose mode - [ preamble ] result: * driver: pdftex * paper: a4paper * layout: * layoutoffset:(h,v)=(0.0pt,0.0pt) * modes: * h-part:(L,W,R)=(89.62709pt, 418.25368pt, 89.6271pt) * v-part:(T,H,B)=(56.9055pt, 731.23584pt, 56.9055pt) * \paperwidth=597.50787pt * \paperheight=845.04684pt * \textwidth=418.25368pt * \textheight=731.23584pt * \oddsidemargin=17.3571pt * \evensidemargin=17.3571pt * \topmargin=-52.36449pt * \headheight=12.0pt * \headsep=25.0pt * \topskip=10.0pt * \footskip=30.0pt * \marginparwidth=65.0pt * \marginparsep=11.0pt * \columnsep=10.0pt * \skip\footins=9.0pt plus 4.0pt minus 2.0pt * \hoffset=0.0pt * \voffset=0.0pt * \mag=1000 * \@twocolumnfalse * \@twosidefalse * \@mparswitchfalse * \@reversemarginfalse * (1in=72.27pt=25.4mm, 1cm=28.453pt) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./biopdb_faq.out) (./biopdb_faq.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) Overfull \hbox (40.90678pt too wide) in paragraph at lines 112--119 []\T1/pbk/l/n/10 However, the [][]\T1/pcr/m/n/10 Bio.PDB.mmCIF.MMCIFlex []\T1/p bk/l/n/10 mod-ule (used in-ter-nally by [][]\T1/pcr/m/n/10 Bio.PDB.MMCIFParser [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspbk.fd) [2] Overfull \hbox (21.75009pt too wide) in paragraph at lines 257--262 \T1/pbk/l/n/10 file to their val-ues. If there are mul-ti-ple val-ues (like in the case of tag \T1/pcr/m/n/10 _atom_site.Cartn_y\T1/pbk/l/n/10 , [3] Overfull \hbox (13.9754pt too wide) in paragraph at lines 298--303 \T1/pbk/l/n/10 The avail-able keys are \T1/pcr/m/n/10 name, head, deposition_-d ate, release_-date, structure_- Overfull \hbox (11.71707pt too wide) in paragraph at lines 298--303 \T1/pcr/m/n/10 method, resolution, structure_-reference \T1/pbk/l/n/10 (maps to a list of ref-er-ences), \T1/pcr/m/n/10 journal_- [4] [5] [6] [7 <./images/smcra.png (PNG copy)>] [8] [9] [10] Overfull \hbox (45.08351pt too wide) in paragraph at lines 960--964 \T1/pbk/l/n/10 Note that in the above case only model 0 of the struc-ture is co n-sid-ered by \T1/pcr/m/n/10 PolypeptideBuilder\T1/pbk/l/n/10 . Overfull \hbox (10.80998pt too wide) in paragraph at lines 968--973 \T1/pbk/l/n/10 try). The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on biopdb_faq.pdf (15 pages, 163990 bytes). Transcript written on biopdb_faq.log. pdflatex biopdb_faq.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./biopdb_faq.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/bookman.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/latin1.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 56. (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty (/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def) (/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def (/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def)))) (./biopdb_faq.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pbk.fd) *geometry* driver: auto-detecting *geometry* detected driver: pdftex *geometry* verbose mode - [ preamble ] result: * driver: pdftex * paper: a4paper * layout: * layoutoffset:(h,v)=(0.0pt,0.0pt) * modes: * h-part:(L,W,R)=(89.62709pt, 418.25368pt, 89.6271pt) * v-part:(T,H,B)=(56.9055pt, 731.23584pt, 56.9055pt) * \paperwidth=597.50787pt * \paperheight=845.04684pt * \textwidth=418.25368pt * \textheight=731.23584pt * \oddsidemargin=17.3571pt * \evensidemargin=17.3571pt * \topmargin=-52.36449pt * \headheight=12.0pt * \headsep=25.0pt * \topskip=10.0pt * \footskip=30.0pt * \marginparwidth=65.0pt * \marginparsep=11.0pt * \columnsep=10.0pt * \skip\footins=9.0pt plus 4.0pt minus 2.0pt * \hoffset=0.0pt * \voffset=0.0pt * \mag=1000 * \@twocolumnfalse * \@twosidefalse * \@mparswitchfalse * \@reversemarginfalse * (1in=72.27pt=25.4mm, 1cm=28.453pt) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./biopdb_faq.out) (./biopdb_faq.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) Overfull \hbox (40.90678pt too wide) in paragraph at lines 112--119 []\T1/pbk/l/n/10 However, the [][]\T1/pcr/m/n/10 Bio.PDB.mmCIF.MMCIFlex []\T1/p bk/l/n/10 mod-ule (used in-ter-nally by [][]\T1/pcr/m/n/10 Bio.PDB.MMCIFParser [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspbk.fd) [2] Overfull \hbox (21.75009pt too wide) in paragraph at lines 257--262 \T1/pbk/l/n/10 file to their val-ues. If there are mul-ti-ple val-ues (like in the case of tag \T1/pcr/m/n/10 _atom_site.Cartn_y\T1/pbk/l/n/10 , [3] Overfull \hbox (13.9754pt too wide) in paragraph at lines 298--303 \T1/pbk/l/n/10 The avail-able keys are \T1/pcr/m/n/10 name, head, deposition_-d ate, release_-date, structure_- Overfull \hbox (11.71707pt too wide) in paragraph at lines 298--303 \T1/pcr/m/n/10 method, resolution, structure_-reference \T1/pbk/l/n/10 (maps to a list of ref-er-ences), \T1/pcr/m/n/10 journal_- [4] [5] [6] [7 <./images/smcra.png (PNG copy)>] [8] [9] [10] Overfull \hbox (45.08351pt too wide) in paragraph at lines 960--964 \T1/pbk/l/n/10 Note that in the above case only model 0 of the struc-ture is co n-sid-ered by \T1/pcr/m/n/10 PolypeptideBuilder\T1/pbk/l/n/10 . Overfull \hbox (10.80998pt too wide) in paragraph at lines 968--973 \T1/pbk/l/n/10 try). The se-quence of each polypep-tide can then eas-ily be ob- tained from the \T1/pcr/m/n/10 Polypeptide [11] Overfull \hbox (87.74638pt too wide) in paragraph at lines 1097--1098 []\T1/pcr/m/n/10 # Calculate classical coordination number exp_fs=hse.calc_fs_e xposure(model) [12] Overfull \hbox (20.6135pt too wide) in paragraph at lines 1118--1123 \T1/pcr/m/n/10 Atom \T1/pbk/l/n/10 ob-jects re-turn a \T1/pcr/m/n/10 Vector \T1 /pbk/l/n/10 ob-ject rep-re-sen-ta-tion of the co-or-di-nates with the \T1/pcr/m /n/10 get_vector [13] [14] Overfull \hbox (1.21811pt too wide) in paragraph at lines 1280--1288 []\T1/pbk/l/n/10 THE CON-TRIB-U-TORS AND COPY-RIGHT HOLD-ERS OF THIS SOFT-WARE DIS-CLAIM [15] (./biopdb_faq.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on biopdb_faq.pdf (15 pages, 163990 bytes). Transcript written on biopdb_faq.log. make -C install make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/Doc/install' pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. No file Installation.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) LaTeX Warning: Reference `sec:windows_install' on page 1 undefined on input lin e 108. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] LaTeX Warning: Reference `sec:is_working' on page 7 undefined on input line 460 . [7] LaTeX Warning: Reference `sec:unix_install' on page 8 undefined on input line 5 37. Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . LaTeX Warning: Reference `sec:is_working' on page 8 undefined on input line 558 . Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' [8] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) Package rerunfilecheck Warning: File `Installation.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 144000 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149747 bytes). Transcript written on Installation.log. pdflatex Installation.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Installation.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/preprint/fullpage.sty) (/usr/share/texmf/tex/latex/misc/hevea.sty (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty Excluding comment 'comment') Excluding comment 'rawhtml' Excluding comment 'htmlonly') (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 52. (./Installation.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./Installation.out) (./Installation.out) (./Installation.toc) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] [5] [6] [7] Overfull \hbox (9.0224pt too wide) in paragraph at lines 540--541 []\OT1/cmr/m/n/10 For Python 2.6 we cur-rently use Mi-crosoft's free VC++ 2008 Ex-press Edi-tion from [][]$\OT1/cmtt/m/n/10 http : / / www . microsoft . [8] Overfull \hbox (27.57379pt too wide) in paragraph at lines 563--565 [][]\OT1/cmtt/m/n/10 PYTHONPATH []\OT1/cmr/m/n/10 with some-thing like [][]\OT1 /cmtt/m/n/10 export PYTHONPATH = $PYTHONPATH':/directory/where/you/put/Biopytho n' (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (9.6602pt too wide) in paragraph at lines 600--601 []\OT1/cmr/m/n/10 NCBI Stan-dalone BLAST, which can used with the [][]\OT1/cmtt /m/n/10 Bio.Blast []\OT1/cmr/m/n/10 mod-ule and parsed with the [][]\OT1/cmtt/m /n/10 Bio.SearchIO [9] [10] (./Installation.aux) ) (see the transcript file for additional information) Output written on Installation.pdf (10 pages, 149889 bytes). Transcript written on Installation.log. hevea -fix Installation.tex Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:108: Warning: Undefined label: 'sec:windows_install' ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:460: Warning: Undefined label: 'sec:is_working' ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:537: Warning: Undefined label: 'sec:unix_install' ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:558: Warning: Undefined label: 'sec:is_working' ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:67: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:114: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:140: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:218: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:230: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:255: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:314: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:317: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:387: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:400: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:406: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:413: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:419: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:421: Warning: Suppressing nested a element ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:456: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:467: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:497: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:516: Warning: Suppressing nested a element ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:540: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:548: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:556: Warning: Suppressing nested a element ./Installation.tex:561: Warning: '_' occurring outside math mode ./Installation.tex:609: Warning: Suppressing nested a element ./Installation.tex:609: Warning: Suppressing nested a element Fixpoint reached in 2 step(s) hevea -fix -text Installation.tex Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode HeVeA Warning: Label(s) may have changed. Rerun me to get cross-references right. Run, run, again... Exclude comment 'comment' ./Installation.tex:55: Warning: tt_mode is an empty style ./Installation.tex:61: Warning: No date given ./Installation.tex:430: Warning: '_' occurring outside math mode ./Installation.tex:535: Warning: '_' occurring outside math mode ./Installation.tex:561: Warning: '_' occurring outside math mode Fixpoint reached in 2 step(s) make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc/install' make[2]: Leaving directory '/<>/python-biopython-1.73+dfsg/Doc' make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' rm -f debian/python-biopython-doc.debhelper.log debian/python-biopython-sql.debhelper.log debian/python-biopython.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' mkdir -p Tests_avoid for avoid in PAML_tools EmbossPhylipNew MSAProbs_tool NACCESS_tool PopGen_DFDist PopGen_FDist PopGen_GenePop PopGen_GenePop_EasyController PopGen_SimCoal XXmotif_tool BioSQL_MySQLdb BioSQL_psycopg2 phyml_tool \ ; do \ mv Tests/test_${avoid}.py Tests_avoid ; \ done mv: cannot stat 'Tests/test_PopGen_DFDist.py': No such file or directory mv: cannot stat 'Tests/test_PopGen_FDist.py': No such file or directory mv: cannot stat 'Tests/test_PopGen_SimCoal.py': No such file or directory # For the doc package we need a clean testsuite without all the remaining files. So keep a clean copy here mkdir -p debian/tmp_tests cp -a Tests debian/tmp_tests # remove duplicated file rm -f debian/tmp_tests/Tests/Quality/example.fastq.gz # We also keep the tests we need to avoid for later inspection cp -a Tests_avoid debian/tmp_tests # in the Debian package dialign it is not needed to set DIALIGN2_DIR but the test is verifying this dir # to run the EMBOSS test test_Emboss also requires to have the environment variable EMBOSS_ROOT set LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom \ --test-args='set -e; \ mkdir -p {build_dir}/home; \ mkdir -p {build_dir}/Doc/examples; \ cp -a Doc/Tutorial.tex {build_dir}/Doc; \ cp -a Doc/Tutorial {build_dir}/Doc; \ cp -a Doc/examples {build_dir}/Doc; \ cp -a Tests {build_dir}; \ cd {build_dir}/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline' pybuild --test -i python{version} -p 2.7 --test --system=custom "--test-args=set -e; \\\ mkdir -p {build_dir}/home; \\\ mkdir -p {build_dir}/Doc/examples; \\\ cp -a Doc/Tutorial.tex {build_dir}/Doc; \\\ cp -a Doc/Tutorial {build_dir}/Doc; \\\ cp -a Doc/examples {build_dir}/Doc; \\\ cp -a Tests {build_dir}; \\\ cd {build_dir}/Tests; \\\ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline" I: pybuild base:217: set -e; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples; \ cp -a Doc/Tutorial.tex /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Doc/Tutorial /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Doc/examples /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc; \ cp -a Tests /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build; \ cd /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home python2.7 run_tests.py --offline test_Ace ... ok test_Affy ... ok test_AlignIO ... ok test_AlignIO_ClustalIO ... ok test_AlignIO_EmbossIO ... ok test_AlignIO_FastaIO ... ok test_AlignIO_MauveIO ... ok test_AlignIO_PhylipIO ... ok test_AlignIO_convert ... ok test_AlignInfo ... ok test_Application ... ok test_BWA_tool ... ok test_BioSQL_MySQLdb_online ... skipping. internet not available test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) test_BioSQL_mysql_connector_online ... skipping. internet not available test_BioSQL_psycopg2_online ... skipping. internet not available test_BioSQL_sqlite3 ... ok test_BioSQL_sqlite3_online ... skipping. internet not available test_CAPS ... ok test_CelFile ... ok test_Chi2 ... ok test_ClustalOmega_tool ... ok test_Clustalw_tool ... ok test_Cluster ... ok test_CodonTable ... ok test_CodonUsage ... ok test_ColorSpiral ... ok test_Compass ... ok test_Consensus ... ok test_Crystal ... ok test_DSSP_tool ... ok test_Dialign_tool ... ok test_EMBL_unittest ... ok test_Emboss ... ok test_EmbossPrimer ... ok test_Entrez ... ok test_Entrez_online ... skipping. internet not available test_Entrez_parser ... ok test_Enzyme ... ok test_ExPASy ... skipping. internet not available test_FSSP ... ok test_Fasttree_tool ... ok test_File ... ok test_GenBank ... ok test_GenBank_unittest ... ok test_GenomeDiagram ... ok test_GraphicsBitmaps ... ok test_GraphicsChromosome ... ok test_GraphicsDistribution ... ok test_GraphicsGeneral ... ok test_HMMCasino ... ok test_HMMGeneral ... ok test_KDTree ... ok test_KEGG ... ok test_KEGG_online ... skipping. internet not available test_KGML_graphics ... ok test_KGML_graphics_online ... skipping. internet not available test_KGML_nographics ... ok test_KeyWList ... ok test_Location ... ok test_LogisticRegression ... ok test_MafIO_index ... ok test_Mafft_tool ... ok test_MarkovModel ... ok test_Medline ... ok test_Muscle_tool ... ok test_NCBITextParser ... ok test_NCBIXML ... ok test_NCBI_BLAST_tools ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastp and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ deltablast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ makeblastdb and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -blastdb_version) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ psiblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ rpsblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -subject_besthit) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) ok test_NCBI_qblast ... skipping. internet not available test_NaiveBayes ... ok test_Nexus ... ok test_PAML_baseml ... ok test_PAML_codeml ... ok test_PAML_yn00 ... ok test_PDB ... ok test_PDBList ... skipping. internet not available test_PDB_FragmentMapper ... ok test_PDB_KDTree ... ok test_PDB_MMCIF2Dict ... ok test_PDB_MMCIFParser ... ok test_PDB_Polypetide ... ok test_PDB_ResidueDepth ... skipping. Install MSMS if you want to use it in Biopython. test_PDB_StructureAlignment ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain A is discontinuous at line 13298. PDBConstructionWarning) /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain B is discontinuous at line 13344. PDBConstructionWarning) ok test_PDB_Superimposer ... ok test_PDB_vectors ... ok test_Pathway ... ok test_Phd ... ok test_Phylo ... ok test_PhyloXML ... ok test_Phylo_CDAO ... ok test_Phylo_NeXML ... ok test_Phylo_matplotlib ... ok test_Phylo_networkx ... skipping. Install networkx if you wish to use it with Bio.Phylo test_PopGen_GenePop_nodepend ... ok test_Prank_tool ... ok test_Probcons_tool ... ok test_ProtParam ... ok test_QCPSuperimposer ... ok test_RCSBFormats ... ok test_Restriction ... skipping. Under Python 2 this test needs the unittest2 library test_SCOP_Astral ... ok test_SCOP_Cla ... ok test_SCOP_Des ... ok test_SCOP_Dom ... ok test_SCOP_Hie ... ok test_SCOP_Raf ... ok test_SCOP_Residues ... ok test_SCOP_Scop ... ok test_SCOP_online ... skipping. internet not available test_SVDSuperimposer ... ok test_SearchIO_blast_tab ... ok test_SearchIO_blast_tab_index ... ok test_SearchIO_blast_text ... ok test_SearchIO_blast_xml ... ok test_SearchIO_blast_xml_index ... ok test_SearchIO_blat_psl ... ok test_SearchIO_blat_psl_index ... ok test_SearchIO_exonerate ... ok test_SearchIO_exonerate_text_index ... ok test_SearchIO_exonerate_vulgar_index ... ok test_SearchIO_fasta_m10 ... ok test_SearchIO_fasta_m10_index ... ok test_SearchIO_hmmer2_text ... ok test_SearchIO_hmmer2_text_index ... ok test_SearchIO_hmmer3_domtab ... ok test_SearchIO_hmmer3_domtab_index ... ok test_SearchIO_hmmer3_tab ... ok test_SearchIO_hmmer3_tab_index ... ok test_SearchIO_hmmer3_text ... ok test_SearchIO_hmmer3_text_index ... ok test_SearchIO_interproscan_xml ... ok test_SearchIO_legacy ... ok test_SearchIO_model ... ok test_SearchIO_write ... ok test_SeqFeature ... ok test_SeqIO ... ok test_SeqIO_AbiIO ... ok test_SeqIO_FastaIO ... ok test_SeqIO_Insdc ... ok test_SeqIO_PdbIO ... ok test_SeqIO_QualityIO ... ok test_SeqIO_SeqXML ... ok test_SeqIO_convert ... ok test_SeqIO_features ... ok test_SeqIO_index ... ok test_SeqIO_online ... skipping. internet not available test_SeqIO_write ... ok test_SeqRecord ... ok test_SeqUtils ... ok test_Seq_objs ... ok test_SffIO ... ok test_SubsMat ... ok test_SwissProt ... ok test_TCoffee_tool ... ok test_TogoWS ... skipping. internet not available test_TreeConstruction ... ok test_Tutorial ... ok test_UniGene ... ok test_Uniprot ... ok test_Wise ... ok test_align ... ok test_bgzf ... ok test_cellosaurus ... ok test_codonalign ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok test_geo ... ok test_kNN ... ok test_lowess ... ok test_mmtf ... skipping. Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_mmtf_online ... skipping. Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_motifs ... ok test_motifs_online ... skipping. internet not available test_pairwise2 ... ok test_pairwise_aligner ... ok test_phenotype ... ok test_phenotype_fit ... ok test_prodoc ... ok test_prosite1 ... ok test_prosite2 ... ok test_psw ... ok test_raxml_tool ... ok test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython test_seq ... skipping. Under Python 2 this test needs the unittest2 library test_translate ... ok test_trie ... ok Bio.Align docstring test ... ok Bio.Align.Applications._Clustalw docstring test ... ok Bio.Align.Applications._ClustalOmega docstring test ... ok Bio.Align.Applications._Dialign docstring test ... ok Bio.Align.Applications._MSAProbs docstring test ... ok Bio.Align.Applications._Mafft docstring test ... ok Bio.Align.Applications._Muscle docstring test ... ok Bio.Align.Applications._Probcons docstring test ... ok Bio.Align.Applications._Prank docstring test ... ok Bio.Align.Applications._TCoffee docstring test ... ok Bio.AlignIO docstring test ... ok Bio.AlignIO.StockholmIO docstring test ... ok Bio.Alphabet docstring test ... ok Bio.Alphabet.Reduced docstring test ... ok Bio.Application docstring test ... ok Bio.bgzf docstring test ... ok Bio.codonalign docstring test ... ok Bio.codonalign.codonalignment docstring test ... ok Bio.codonalign.codonalphabet docstring test ... ok Bio.codonalign.codonseq docstring test ... ok Bio.Blast.Applications docstring test ... ok Bio.Emboss.Applications docstring test ... ok Bio.GenBank docstring test ... ok Bio.Graphics.GenomeDiagram._Colors docstring test ... ok Bio.KEGG.Compound docstring test ... ok Bio.KEGG.Enzyme docstring test ... ok Bio.KEGG.Gene docstring test ... ok Bio.KEGG.KGML.KGML_parser docstring test ... ok Bio.Nexus.Nexus docstring test ... ok Bio.NMR.xpktools docstring test ... ok Bio.motifs docstring test ... ok Bio.motifs.applications._xxmotif docstring test ... ok Bio.pairwise2 docstring test ... ok Bio.Phylo.Applications._Raxml docstring test ... ok Bio.Phylo.Consensus docstring test ... ok Bio.Phylo.BaseTree docstring test ... ok Bio.SearchIO docstring test ... ok Bio.SearchIO._model docstring test ... ok Bio.SearchIO._model.query docstring test ... ok Bio.SearchIO._model.hit docstring test ... ok Bio.SearchIO._model.hsp docstring test ... ok Bio.SearchIO.BlastIO docstring test ... ok Bio.SearchIO.HmmerIO docstring test ... ok Bio.SearchIO.FastaIO docstring test ... ok Bio.SearchIO.BlatIO docstring test ... ok Bio.SearchIO.ExonerateIO docstring test ... ok Bio.SeqIO docstring test ... ok Bio.SeqIO.AceIO docstring test ... ok Bio.SeqIO.FastaIO docstring test ... ok Bio.SeqIO.IgIO docstring test ... ok Bio.SeqIO.InsdcIO docstring test ... ok Bio.SeqIO.PhdIO docstring test ... ok Bio.SeqIO.PirIO docstring test ... ok Bio.SeqIO.QualityIO docstring test ... ok Bio.SeqIO.SffIO docstring test ... ok Bio.SeqIO.TabIO docstring test ... ok Bio.SeqFeature docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py:2609: BiopythonWarning: Partial codon, len(sequence) not a multiple of three. Explicitly trim the sequence or add trailing N before translation. This may become an error in future. BiopythonWarning) ok Bio.SeqRecord docstring test ... ok Bio.SeqUtils docstring test ... ok Bio.SeqUtils.CheckSum docstring test ... ok Bio.SeqUtils.MeltingTemp docstring test ... ok Bio.SeqUtils.ProtParam docstring test ... ok Bio.Sequencing.Applications._Novoalign docstring test ... ok Bio.Sequencing.Applications._bwa docstring test ... ok Bio.Sequencing.Applications._samtools docstring test ... ok Bio.SwissProt docstring test ... ok Bio.UniProt.GOA docstring test ... ok Bio.Wise docstring test ... ok Bio.Wise.psw docstring test ... ok Bio.Affy.CelFile docstring test ... ok Bio.MaxEntropy docstring test ... ok Bio.PDB.Polypeptide docstring test ... ok Bio.PDB.Selection docstring test ... ok Bio.SeqIO.PdbIO docstring test ... ok Bio.Statistics.lowess docstring test ... ok Bio.SVDSuperimposer docstring test ... ok ---------------------------------------------------------------------- Ran 261 tests in 317.580 seconds Skipping any tests requiring internet access Python version: 2.7.16rc1 (default, Feb 18 2019, 11:05:09) [GCC 8.2.0] Operating system: posix linux2 pybuild --test -i python{version} -p 3.7 --test --system=custom "--test-args=set -e; \\\ mkdir -p {build_dir}/home; \\\ mkdir -p {build_dir}/Doc/examples; \\\ cp -a Doc/Tutorial.tex {build_dir}/Doc; \\\ cp -a Doc/Tutorial {build_dir}/Doc; \\\ cp -a Doc/examples {build_dir}/Doc; \\\ cp -a Tests {build_dir}; \\\ cd {build_dir}/Tests; \\\ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME={build_dir}/home {interpreter} run_tests.py --offline" I: pybuild base:217: set -e; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home; \ mkdir -p /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples; \ cp -a Doc/Tutorial.tex /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Doc/Tutorial /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Doc/examples /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc; \ cp -a Tests /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build; \ cd /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests; \ env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home python3.7 run_tests.py --offline x_order_2: colinear! x_order_2: colinear! x_order_2: colinear! test_Ace ... ok test_Affy ... ok test_AlignIO ... ok test_AlignIO_ClustalIO ... ok test_AlignIO_EmbossIO ... ok test_AlignIO_FastaIO ... ok test_AlignIO_MauveIO ... ok test_AlignIO_PhylipIO ... ok test_AlignIO_convert ... ok test_AlignInfo ... ok test_Application ... ok test_BWA_tool ... ok test_BioSQL_MySQLdb_online ... skipping. internet not available test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) test_BioSQL_mysql_connector_online ... skipping. internet not available test_BioSQL_psycopg2_online ... skipping. internet not available test_BioSQL_sqlite3 ... ok test_BioSQL_sqlite3_online ... skipping. internet not available test_CAPS ... ok test_CelFile ... ok test_Chi2 ... ok test_ClustalOmega_tool ... ok test_Clustalw_tool ... ok test_Cluster ... ok test_CodonTable ... ok test_CodonUsage ... ok test_ColorSpiral ... ok test_Compass ... ok test_Consensus ... ok test_Crystal ... ok test_DSSP_tool ... ok test_Dialign_tool ... ok test_EMBL_unittest ... ok test_Emboss ... ok test_EmbossPrimer ... ok test_Entrez ... ok test_Entrez_online ... skipping. internet not available test_Entrez_parser ... ok test_Enzyme ... ok test_ExPASy ... skipping. internet not available test_FSSP ... ok test_Fasttree_tool ... ok test_File ... ok test_GenBank ... ok test_GenBank_unittest ... ok test_GenomeDiagram ... ok test_GraphicsBitmaps ... ok test_GraphicsChromosome ... ok test_GraphicsDistribution ... ok test_GraphicsGeneral ... ok test_HMMCasino ... ok test_HMMGeneral ... ok test_KDTree ... ok test_KEGG ... ok test_KEGG_online ... skipping. internet not available test_KGML_graphics ... ok test_KGML_graphics_online ... skipping. internet not available test_KGML_nographics ... ok test_KeyWList ... ok test_Location ... ok test_LogisticRegression ... ok test_MafIO_index ... ok test_Mafft_tool ... ok test_MarkovModel ... ok test_Medline ... ok test_Muscle_tool ... ok test_NCBITextParser ... ok test_NCBIXML ... ok test_NCBI_BLAST_tools ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastp and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ blastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ deltablast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ makeblastdb and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -blastdb_version) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ psiblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ rpsblast and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -subject_besthit) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastn and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py:401: UserWarning: NCBI BLAST+ tblastx and Biopython out sync. Please update Biopython, or report this issue if you are already using the latest version. (Extra args: ; Missing: -negative_taxidlist,-negative_taxids,-subject_besthit,-taxidlist,-taxids) ",".join(sorted(missing)))) ok test_NCBI_qblast ... skipping. internet not available test_NaiveBayes ... ok test_Nexus ... ok test_PAML_baseml ... ok test_PAML_codeml ... ok test_PAML_yn00 ... ok test_PDB ... ok test_PDBList ... skipping. internet not available test_PDB_FragmentMapper ... ok test_PDB_KDTree ... ok test_PDB_MMCIF2Dict ... ok test_PDB_MMCIFParser ... ok test_PDB_Polypetide ... ok test_PDB_ResidueDepth ... skipping. Install MSMS if you want to use it in Biopython. test_PDB_StructureAlignment ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain A is discontinuous at line 13298. PDBConstructionWarning) /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py:91: PDBConstructionWarning: WARNING: Chain B is discontinuous at line 13344. PDBConstructionWarning) ok test_PDB_Superimposer ... ok test_PDB_vectors ... ok test_Pathway ... ok test_Phd ... ok test_Phylo ... ok test_PhyloXML ... ok test_Phylo_CDAO ... ok test_Phylo_NeXML ... ok test_Phylo_matplotlib ... ok test_Phylo_networkx ... skipping. Install networkx if you wish to use it with Bio.Phylo test_PopGen_GenePop_nodepend ... ok test_Prank_tool ... ok test_Probcons_tool ... ok test_ProtParam ... ok test_QCPSuperimposer ... ok test_RCSBFormats ... ok test_Restriction ... ok test_SCOP_Astral ... ok test_SCOP_Cla ... ok test_SCOP_Des ... ok test_SCOP_Dom ... ok test_SCOP_Hie ... ok test_SCOP_Raf ... ok test_SCOP_Residues ... ok test_SCOP_Scop ... ok test_SCOP_online ... skipping. internet not available test_SVDSuperimposer ... ok test_SearchIO_blast_tab ... ok test_SearchIO_blast_tab_index ... ok test_SearchIO_blast_text ... ok test_SearchIO_blast_xml ... ok test_SearchIO_blast_xml_index ... ok test_SearchIO_blat_psl ... ok test_SearchIO_blat_psl_index ... ok test_SearchIO_exonerate ... ok test_SearchIO_exonerate_text_index ... ok test_SearchIO_exonerate_vulgar_index ... ok test_SearchIO_fasta_m10 ... ok test_SearchIO_fasta_m10_index ... ok test_SearchIO_hmmer2_text ... ok test_SearchIO_hmmer2_text_index ... ok test_SearchIO_hmmer3_domtab ... ok test_SearchIO_hmmer3_domtab_index ... ok test_SearchIO_hmmer3_tab ... ok test_SearchIO_hmmer3_tab_index ... ok test_SearchIO_hmmer3_text ... ok test_SearchIO_hmmer3_text_index ... ok test_SearchIO_interproscan_xml ... ok test_SearchIO_legacy ... ok test_SearchIO_model ... ok test_SearchIO_write ... ok test_SeqFeature ... ok test_SeqIO ... ok test_SeqIO_AbiIO ... ok test_SeqIO_FastaIO ... ok test_SeqIO_Insdc ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Scanner.py:287: BiopythonParserWarning: Non-standard feature line wrapping (didn't break on comma)? BiopythonParserWarning) ok test_SeqIO_PdbIO ... ok test_SeqIO_QualityIO ... ok test_SeqIO_SeqXML ... ok test_SeqIO_convert ... ok test_SeqIO_features ... ok test_SeqIO_index ... ok test_SeqIO_online ... skipping. internet not available test_SeqIO_write ... ok test_SeqRecord ... ok test_SeqUtils ... ok test_Seq_objs ... ok test_SffIO ... ok test_SubsMat ... ok test_SwissProt ... ok test_TCoffee_tool ... ok test_TogoWS ... skipping. internet not available test_TreeConstruction ... ok test_Tutorial ... ok test_UniGene ... ok test_Uniprot ... ok test_Wise ... ok test_align ... ok test_bgzf ... ok test_cellosaurus ... ok test_codonalign ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok test_geo ... ok test_kNN ... ok test_lowess ... ok test_mmtf ... skipping. Error: Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_mmtf_online ... skipping. Error: Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) test_motifs ... ok test_motifs_online ... skipping. internet not available test_pairwise2 ... ok test_pairwise_aligner ... ok test_phenotype ... ok test_phenotype_fit ... ok test_prodoc ... ok test_prosite1 ... ok test_prosite2 ... ok test_psw ... ok test_raxml_tool ... ok test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython test_seq ... ok test_translate ... ok test_trie ... ok Bio.Align docstring test ... ok Bio.Align.Applications._Clustalw docstring test ... ok Bio.Align.Applications._ClustalOmega docstring test ... ok Bio.Align.Applications._Dialign docstring test ... ok Bio.Align.Applications._MSAProbs docstring test ... ok Bio.Align.Applications._Mafft docstring test ... ok Bio.Align.Applications._Muscle docstring test ... ok Bio.Align.Applications._Probcons docstring test ... ok Bio.Align.Applications._Prank docstring test ... ok Bio.Align.Applications._TCoffee docstring test ... ok Bio.AlignIO docstring test ... ok Bio.AlignIO.StockholmIO docstring test ... ok Bio.Alphabet docstring test ... ok Bio.Alphabet.Reduced docstring test ... ok Bio.Application docstring test ... ok Bio.bgzf docstring test ... ok Bio.codonalign docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 6 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TAA' -> 'stop' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok Bio.codonalign.codonalignment docstring test ... ok Bio.codonalign.codonalphabet docstring test ... ok Bio.codonalign.codonseq docstring test ... ok Bio.Blast.Applications docstring test ... ok Bio.Emboss.Applications docstring test ... ok Bio.GenBank docstring test ... ok Bio.Graphics.GenomeDiagram._Colors docstring test ... ok Bio.KEGG.Compound docstring test ... ok Bio.KEGG.Enzyme docstring test ... ok Bio.KEGG.Gene docstring test ... ok Bio.KEGG.KGML.KGML_parser docstring test ... ok Bio.Nexus.Nexus docstring test ... ok Bio.NMR.xpktools docstring test ... ok Bio.motifs docstring test ... ok Bio.motifs.applications._xxmotif docstring test ... ok Bio.pairwise2 docstring test ... ok Bio.Phylo.Applications._Raxml docstring test ... ok Bio.Phylo.Consensus docstring test ... ok Bio.Phylo.BaseTree docstring test ... ok Bio.SearchIO docstring test ... ok Bio.SearchIO._model docstring test ... ok Bio.SearchIO._model.query docstring test ... ok Bio.SearchIO._model.hit docstring test ... ok Bio.SearchIO._model.hsp docstring test ... ok Bio.SearchIO.BlastIO docstring test ... ok Bio.SearchIO.HmmerIO docstring test ... ok Bio.SearchIO.FastaIO docstring test ... ok Bio.SearchIO.BlatIO docstring test ... ok Bio.SearchIO.ExonerateIO docstring test ... ok Bio.Seq docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2589: BiopythonWarning: This table contains 2 codon(s) which code(s) for both STOP and an amino acid (e.g. 'TGA' -> 'W' or STOP). Such codons will be translated as amino acid. BiopythonWarning) ok Bio.SeqIO docstring test ... ok Bio.SeqIO.AceIO docstring test ... ok Bio.SeqIO.FastaIO docstring test ... ok Bio.SeqIO.IgIO docstring test ... ok Bio.SeqIO.InsdcIO docstring test ... ok Bio.SeqIO.PhdIO docstring test ... ok Bio.SeqIO.PirIO docstring test ... ok Bio.SeqIO.QualityIO docstring test ... ok Bio.SeqIO.SffIO docstring test ... ok Bio.SeqIO.TabIO docstring test ... ok Bio.SeqFeature docstring test ... /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py:2609: BiopythonWarning: Partial codon, len(sequence) not a multiple of three. Explicitly trim the sequence or add trailing N before translation. This may become an error in future. BiopythonWarning) ok Bio.SeqRecord docstring test ... ok Bio.SeqUtils docstring test ... ok Bio.SeqUtils.CheckSum docstring test ... ok Bio.SeqUtils.MeltingTemp docstring test ... ok Bio.SeqUtils.ProtParam docstring test ... ok Bio.Sequencing.Applications._Novoalign docstring test ... ok Bio.Sequencing.Applications._bwa docstring test ... ok Bio.Sequencing.Applications._samtools docstring test ... ok Bio.SwissProt docstring test ... ok Bio.UniProt.GOA docstring test ... ok Bio.Wise docstring test ... ok Bio.Wise.psw docstring test ... ok Bio.Affy.CelFile docstring test ... ok Bio.MaxEntropy docstring test ... ok Bio.PDB.Polypeptide docstring test ... ok Bio.PDB.Selection docstring test ... ok Bio.SeqIO.PdbIO docstring test ... ok Bio.Statistics.lowess docstring test ... ok Bio.SVDSuperimposer docstring test ... ok ---------------------------------------------------------------------- Ran 262 tests in 275.444 seconds Skipping any tests requiring internet access Python version: 3.7.2+ (default, Feb 27 2019, 15:41:59) [GCC 8.3.0] Operating system: posix linux mv Tests_avoid/* Tests rmdir Tests_avoid make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2,python3 --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python-biopython.substvars debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python-biopython-sql.substvars debian/python3-biopython-sql.substvars rm -fr -- debian/.debhelper/generated/python-biopython/ debian/python-biopython/ debian/tmp/ debian/.debhelper/generated/python3-biopython/ debian/python3-biopython/ debian/.debhelper/generated/python-biopython-doc/ debian/python-biopython-doc/ debian/.debhelper/generated/python-biopython-sql/ debian/python-biopython-sql/ debian/.debhelper/generated/python3-biopython-sql/ debian/python3-biopython-sql/ rm -f debian/python-biopython-doc.debhelper.log debian/python-biopython-sql.debhelper.log debian/python-biopython.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_auto_install install -d /<>/python-biopython-1.73\+dfsg/debian/tmp pybuild --install -i python{version} -p 2.7 --dest-dir /<>/python-biopython-1.73\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python setup.py install --root /<>/python-biopython-1.73+dfsg/debian/tmp running install running build running build_py running egg_info writing requirements to biopython.egg-info/requires.txt writing biopython.egg-info/PKG-INFO writing top-level names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/Loader.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/DBUtils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/BioSQL/BioSeqDatabase.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_35_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_005.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/mirna.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_003.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_001.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_003.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_34_004.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_004.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_35_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/pslx_34_005.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blat/psl_35_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise_aligner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Muscle_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_AbiIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_SeqXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_seq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/compound.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map03070.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.4letter -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/compound.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map00950.rea -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/map01100.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko00010.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko01100.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/enzyme.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko03070.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/gene.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/KEGG/ko00253.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDBList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_SeqXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Consensus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Pathway.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/valine.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/lipoprotein.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/proline.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Enzymes/lactate.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_internet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Chi2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TogoWS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_align.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Muscle_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_translate.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_geo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_wise.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_PhylipIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PopGen_GenePop_nodepend.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsBitmaps.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/test.fsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/no_smpl1.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/3100.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/fake.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/A6_1-DB3.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/3730.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/empty.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/310.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Abi/test_data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Polypetide.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_FSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Mafft_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CelFile.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmpdirprankmsaBWWbH5 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_interproscan_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Mafft_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_networkx.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Compass/comtest1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Compass/comtest2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_EmbossIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite1.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/search_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_features.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output.best.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_internet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ClustalOmega_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp004 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp014 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp016 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/P84001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/keywlist2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/F2CXE6.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/R5HY77.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp012 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/H2CNN8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp009 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp005 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp010 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.gff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp007 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp006 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/Q13639.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp011 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp008 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp015 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.list -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/P97881.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.rdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/uni002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/sp013 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/multi_ex.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/keywlist.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/Q13639.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/F2CXE6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SwissProt/H2CNN8.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Application.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/run_tests.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMCasino.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_write.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Probcons_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_qblast.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Emboss.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_platform.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM645.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM804.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_dual.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM700.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_family.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_series.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSE16.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_affy_chp.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/soft_ex_affy.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Geo/GSM691.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/gen_results.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/baseml/baseml_SE.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/bad_results.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/aa_alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Alignments/longnames.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Alignments creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/lysin.trees -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/lysin.trees.4.6 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/bad.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Trees/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Trees creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model8.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model5.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model6.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model7.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/model2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/bad1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PAML/Control_files/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cellosaurus/cell_lines_2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Medline.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_ClustalIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBIXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_samtools_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Fasttree_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SwissProt.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TogoWS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.cla.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/testDom.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/raftest.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.des.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SCOP/dir.hie.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_codonalign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_MauveIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_nographics.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_File.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Prank_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenomeDiagram.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_QCPSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Cluster.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SubsMat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Location.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/FSSP/1cnv.fssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CAPS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Saf/saf1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Cluster.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/cw02.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/promals3d.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/odd_consensus.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/temp horses.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Clustalw/hedgehog.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_cellosaurus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phd.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ExPASy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/.coveragerc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_UniGene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/cor6_6.db -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-sqlite.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-mysql.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BioSQL/biosqldb-pg.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Ace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Medline/pubmed_result1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/CDAO/test.cdao -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqFeature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsGeneral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Dom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00107.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00165.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00159.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00432.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00640.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00100.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00424.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00113.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00933.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00144.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00472.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00340.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00787.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/Doc/pdoc00149.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00546.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Prosite/ps00488.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqUtils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Wise.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Tutorial.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_010.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_009.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_008.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_007.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_30_hmmscan_006.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_samtools_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Nexus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EmbossPrimer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/InterProScan/test_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Scop.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/phyloxml_examples.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/made_up.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/apaf.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/bcl_2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/distribution.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PhyloXML/example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Prank_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Stockholm/simple.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Stockholm/funny.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_matplotlib.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_NCBI_qblast -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_CodonUsage -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Clustalw -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SeqIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GFF -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Fasttree_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_translate -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Location -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_geo -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GenBank -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_KEGG -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SubsMat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_SearchIO_legacy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_FSSP -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_HMMCasino -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_GFF2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_ClustalOmega_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_property_manager -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_File -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_AlignIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_align -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_Clustalw_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_PDB -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output/test_AlignIO_MauveIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/output creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2201L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2215L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2222_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2220L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_010.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2216L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_006.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2222_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_009.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2102L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2220L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2228_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2012L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/mirna.tab -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2014L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2208L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/wnts.xml.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2014L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2230_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_012.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2221L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/wnts.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2218_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2011L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2212L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_013.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2228_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2222L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_tblastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2222_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/xml_2226_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_011.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2202L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2226_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/tab_2226_tblastn_008.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/text_2010L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/mirna.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Blast/html_msgid_29_blastx_001.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EmbossPrimer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_write.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PhyloXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_UniGene.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_kNN.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/EDD_RAT.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/seqs.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Registry/bt001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MafIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TCoffee_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_QualityIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_DSSP_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Fasttree_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EMBL_unittest.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_MySQLdb_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_psycopg2_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802lc.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/multi.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001422.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GFF/NC_001802x.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Clustalw_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_MafIO_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/sam2.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_header.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_refresh.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/readme.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/ex1_header.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam2.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/sam1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam1_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SamBam/bam2_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Dialign_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_model.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_vectors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_RCSBFormats.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonUsage.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Crystal.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_MySQLdb_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsChromosome.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_codonalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_ResidueDepth.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_Insdc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_mmtf_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Medline.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_features.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Cla.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Mdm_partial.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Hs.2.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniGene/Eca.1.2425.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SVDSuperimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ProtParam.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Compass.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_align.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_legacy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Crystal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/RepBase23.02.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DD231055_edited2.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/kipo_prt_sample.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/embl_with_0_line.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/TRBG361.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DD231055_edited.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/SC10H5.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/hla_3260_sample.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/AE017046.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/epo_prt_selection.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/AAA03323.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/Human_contigs.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/101ma_no_coords.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/location_wrap.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/U87107.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/A04195.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/patents.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/DS830848.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/EMBL/xx_after_co.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/EMBL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Affy/affy_v4_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Affy/affy_v3_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Polypetide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Residues.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Uniprot.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Tutorial.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/biosql.ini.appveyor -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Dialign_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/wrong_sequence_indent.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/gbvrl1_start.seq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/one_of.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/HM138502_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/pBAD30.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/1MRR_A.gp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_misc_feature.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_version.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/cor6_6.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/negative_location.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/KF527485_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/DS830848.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_loc_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/noref.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/protein_refseq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/blank_seq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/no_end_marker.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/cor6_6.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/qualifier_escaping_write.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NT_019265.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NP_416719.gbwithparts -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/protein_refseq2.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/iro.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/qualifier_escaping_read.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/EU851978.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_product.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_accession.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.ffn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/no_origin_no_end.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/origin_line.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_005816.tsv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/arab1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/pri1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/NC_000932.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/EU851978_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/dbsource_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/extra_keywords.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/empty_feature_qualifier.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/KF527485.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/HM138502.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_networkx.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/search_tests_common.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_FSSP.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsDistribution.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KeyWList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_trie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype_fit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TreeConstruction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_CDAO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Raf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_raxml_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBITextParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsBitmaps.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_vulgar_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/requires_wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_FragmentMapper.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cluster/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Cluster/cyano.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/IntelliGenetics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa.bbcols -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa.backbone -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Mauve/simple.xmfa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_matplotlib.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_PdbIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/simple_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/random_organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_widths.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_circular.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/tRNA_chrom.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/multi_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test_1.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_linear.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/line_graph_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/spiral_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigils_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_labels.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_meth_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/square_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/scatter_test_7.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_region_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_meth_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map01100_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_colors.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/map03070_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/line_graph.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_arrows.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/labels_default_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/organism.eps -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_by_obj_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Affy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Motif/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Motif creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_none.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_q_multiple.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Exonerate/exn_22_m_ner.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BWA_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/tolweb.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/characters.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/meta_taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/edgelabels.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/trees-uris.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/treebase-record.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/trees.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/nexml.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/timetree.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/sets.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/phenoscape.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeXML/meta_types.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_geo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_trie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeuralNetwork/repeat.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NeuralNetwork/enolase.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NeuralNetwork creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/ExtendedPhylip/primates.phyx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Compass.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_StructureAlignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/protein_count.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/acc_rep_mat.pik -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/redAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/protein_freq.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/aaDistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SubsMat/redAltAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/seq_tests_common.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme_v_4_11_4.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/minimal_test.meme -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/motifs/meme.rna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo2.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c2line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c3line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/big.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c3space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/c2space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PopGen/haplo3.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_psycopg2_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer2_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TCoffee_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_RCSBFormats.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_sqlite3.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Enzyme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBITextParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/test.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/test_Nexus_input.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/bats.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/codonposset.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Nexus/int_node_labels.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/Cw_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/clustalw.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/DMA_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/B_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/NBRF/DMB_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Probcons_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Application.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Location.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/rna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/global_species_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/protein_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/corrupt_example2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/corrupt_example1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/SeqXML/dna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_qblast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIF2Dict.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_MMCIFParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Astral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/output.best.fas -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_NeXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PopGen_GenePop_nodepend.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/consed_sample.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/seq.cap.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Ace/contig1.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Ace creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Wise/human_114_g01_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Wise/human_114_g02_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_xml_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_domtab_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BWA_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsDistribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_raxml_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/common_BioSQL.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Clustalw_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_QCPSuperimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SwissProt.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/test.log -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/msa.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/majority_ref.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/upgma.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/strict_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/consensus_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/adam_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/nj.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/neighbor_trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/TreeConstruction/pars3.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Scop.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_DSSP_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_bgzf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_nographics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqRecord.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/drosophilla.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl2.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro1.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_nucl.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/egfr_pro.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro5.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro4.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/adh.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro2.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl5.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/pro3.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/codonalign/nucl4.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_legacy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMGeneral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/Plate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/BadPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/phenotype/SmallPlate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Hie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prosite1.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KGML_graphics.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Emboss.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_Insdc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/dups.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/aster_no_wrap.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output006.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output015.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/loveliesbleeding.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output016.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output010.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/phlox.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output012.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output007.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/lupine.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output009.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output013.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/lavender.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/sweetpea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/fa01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output003.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/rosemary.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output014.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output005.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/rose.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output001.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/centaurea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/f001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/aster.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/wisteria.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output008.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output011.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output004.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/output002.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Fasta/elderberry.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blast_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/horses.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/interlaced2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/hennigian.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/horses.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/sequential.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/reference_dna.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/interlaced.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/random.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/sequential2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phylip/reference_dna2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phylip creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/nucleotide1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/taxonomy.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/egquery2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/nucleotide2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/protein.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed3.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/ncbi_mim.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/pubmed1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esummary3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/egquery1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/einfo4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/journals.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/efetch_schemas.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/espell.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/epost1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/esearch5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Entrez/elink2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_hmmer3_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_unit_sep.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_spaces.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/tricky.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example_dos.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_title.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_null.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_short_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_vtab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_double_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/longreads_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_del.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example_dos.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_no_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_93.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_diff_ids.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_tabs.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_double_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/example.fastq.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_space.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_rna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/wrapping_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_long_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_escape.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/misc_dna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/zero_length.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_qual_tab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_at_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/error_trunc_in_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Seq_objs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_exonerate_text_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/seq_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/UniProt/goa_yeast.gaf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Seq_objs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_phenotype_fit.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/bac_find.psearch -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/short.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/no_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/needle.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/water2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/alignret.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/cds_reverse.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/matcher_simple.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/bac_find.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/cds_forward.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/NirK.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/needle_asis.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/matcher_pair.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/NirK_full.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/water.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Emboss/internal_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Des.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Affy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prodoc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ClustalOmega_tool.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Uniprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1MOM_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/3JQH.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/ions.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.xyzr -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2OFG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/dssp_xtra_Sander.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/occupancy.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.rsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/a_structure.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4Q9R_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/alignment_file.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4ZHL.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1SSU_mod.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Sander_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2XHE.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2XHE.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4CUP.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1SSU_mod.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/a_structure.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG_noheader.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/lib_10_z_5.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4CUP.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1LCD.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1LCD.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Miller_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1A8O.asa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/4ZHL.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/Wilke_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/2BEG.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/PDB/1AS5.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_blat_psl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_fasta_m10_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SubsMat.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ExPASy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMCasino.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SearchIO_model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/foki.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/bamii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/foki.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/bamii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/pvuii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/taqi.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/cac81.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/crei.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/taqi.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/pvuii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/crei.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Rebase/cac81.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CAPS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ColorSpiral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_pairwise_aligner.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_EMBL_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_motifs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Restriction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_online.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NCBI_BLAST_tools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SffIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Phylo_NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta2.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/Meta6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta9.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MetaTool/meta.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MetaTool creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/triple_sff_rel_paths.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/triple_sff.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/paired.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/greek.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SCOP_Astral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/tmpdirprankmsah5NYF3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PDB_Superimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_translate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_BioSQL_mysql_connector.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_lowess.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SVDSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_NaiveBayes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/bundle_without_target.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_test.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/unfinished.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/humor.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/cnksr3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/wrong_version.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/invalid.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/length_coords_mismatch.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/corrupt.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/bug2453.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenomeDiagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_LogisticRegression.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_psw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_Entrez_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_PAML_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GraphicsChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/biosql.ini.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_KEGG_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_GenBank_unittest.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_HMMGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_AlignIO_EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO_PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd_454 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd_solexa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/Phd/phd1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Tests/test_SeqIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.bz2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/make_subsmat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/swissprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/nmr/noed.xpk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/nmr/simplepredict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/my_blast.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/alpha.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/PF05371_seed.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/my_blat.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/Proux_et_al_2002_Figure_6.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ec_5.4.2.2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/m_cold.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/beta.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/fasta_dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/simple.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/www_blast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ACT_example.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/clustal_run.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/fasta_iterator.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/getgene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/examples/ls_orchid.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_pdb.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_motifs.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_advanced.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_kegg.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_annot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_entrez.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_introduction.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_searchio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_graphics.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_quick_start.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_align.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_appendix.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phenotype.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phylo.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cluster.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_popgen.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phylo.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_uniprot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seqio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_testing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_appendix.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cluster.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_learning.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_introduction.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seqio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_blast.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_motifs.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_kegg.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_objects.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_contributing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_graphics.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_align.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_quick_start.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_objects.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_learning.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_entrez.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_seq_annot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_advanced.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cookbook.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_searchio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_cookbook.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_contributing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_phenotype.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_blast.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_pdb.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_testing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_popgen.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Doc/Tutorial/chapter_uniprot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/Tutorial creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/KGML/KGML_pathway.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Gene/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Map/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Compound/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/REST.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KEGG/Enzyme/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/LogisticRegression.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/AlignInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/_aligners.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Dialign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Clustalw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Mafft.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_TCoffee.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Probcons.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Prank.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Muscle.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_ClustalOmega.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_MSAProbs.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SwissIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SffIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SeqXmlIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/QualityIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/TabIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PdbIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AbiIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/UniprotIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/Interfaces.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PirIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/PhdIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/InsdcIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/AceIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/IgIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqIO/_convert.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/kNN.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NewickIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/chi2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_paml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/baseml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_codeml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PAML/_parse_yn00.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Newick.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/BaseTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXMLIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXMLIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Consensus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/TreeConstruction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NexusIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAOIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_io.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/_cdao_owl.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Phyml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Fasttree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Raxml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/CDAO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Compass/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_py3k/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SwissProt/KeyWList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Crystal/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/IUPACData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/CodonTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Data/SCOPData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/MarkovModel.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Utilities.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/Trainer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/DynamicProgramming.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/Reduced.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Alphabet/IUPAC.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Dom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Residues.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Hie.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Des.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Cla.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SCOP/Raf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/FSSPTools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/fssp_rec.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Medline/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Application/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/Applications.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIXML.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Blast/NCBIWWW.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CheckSum.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsageIndices.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/MeltingTemp.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsage.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/IsoelectricPoint.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParamData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/lcc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqUtils/ProtParam.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NMR/xpktools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prosite.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prodoc.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/cellosaurus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Enzyme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/CAPS/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/Graph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Pathway/Rep/MultiGraph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniGene/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/lowess.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NaiveBayes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/CelFile.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Record.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Scanner.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triefind.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/_cluster.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Graph.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Feature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Track.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Colors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/GenomeDiagram/_Diagram.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/BasicChromosome.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/KGML_vis.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/ColorSpiral.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Distribution.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Comparative.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/DisplayRepresentation.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SVDSuperimposer/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqFeature.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/FreqTable.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SubsMat/MatrixInfo.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/pairwise2.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/_xxmotif.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/thresholds.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/alignace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/transfac.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/_pwm.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/meme.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/mast.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/minimal.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/matrix.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/motifs/jaspar/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/GenePop/FileParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PopGen/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nexus.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/cnexus.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Trees.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/StandardData.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Nexus/Nodes.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/File.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Ace.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Phd.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_Novoalign.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_bwa.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_samtools.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/trie.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Wise/psw.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalphabet.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/chisq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonalignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/codonalign/codonseq.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/phen_micro.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/phenotype/pm_fitting.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/bgzf.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/Parser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/UniProt/GOA.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Primer3.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/Applications.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/PrimerSearch.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmcifio.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Superimposer.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Residue.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NACCESS.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/ResidueDepth.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/FragmentMapper.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Polypeptide.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/HSExposure.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Entity.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Model.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Atom.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Dice.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIF2Dict.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Selection.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/DSSP.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBList.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/parse_pdb_header.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureBuilder.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/StructureAlignment.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/mmtf/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/kdtrees.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/NeighborSearch.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBExceptions.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/vectors.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Vector.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Structure.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/MMCIFParser.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/Chain.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/PDB/AbstractPropertyMap.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MaxEntropy.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MauveIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/PhylipIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/NexusIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/Interfaces.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/ClustalIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/EmbossIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/MafIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/AlignIO/StockholmIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/KDTree/_CKDTree.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/PrintFormat.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/RanaConfig.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction_Dictionary.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SeqRecord.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_utils.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/NCBIStandalone.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/ParserSupport.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hit.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hsp.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_model/query.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/_base.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/__init__.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/_index.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlatIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/Bio/SearchIO/FastaIO.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/biopython/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.config/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/methods creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/mcoffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/plugins creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.t_coffee/plugins/linux creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython2_2.7/build/home/.cache/matplotlib/fontList.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/home/.cache/matplotlib/tex.cache byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/BioSeq.py to BioSeq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/Loader.py to Loader.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/BioSQL/DBUtils.py to DBUtils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Muscle_tool.py to test_Muscle_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_SeqXML.py to test_SeqIO_SeqXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TogoWS.py to test_TogoWS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_align.py to test_align.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_lowess.py to test_lowess.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_FSSP.py to test_FSSP.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Pathway.py to test_Pathway.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/search_tests_common.py to search_tests_common.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/requires_internet.py to requires_internet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Application.py to test_Application.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Ace.py to test_Ace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/run_tests.py to run_tests.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenBank.py to test_GenBank.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py to test_BioSQL_mysql_connector_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_text.py to test_SearchIO_blast_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo.py to test_Phylo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/PAML/gen_results.py to gen_results.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO.py to test_AlignIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Medline.py to test_Medline.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SwissProt.py to test_SwissProt.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_File.py to test_File.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_mmtf.py to test_mmtf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_QCPSuperimposer.py to test_QCPSuperimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SubsMat.py to test_SubsMat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB.py to test_PDB.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Location.py to test_Location.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Enzyme.py to test_Enzyme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CAPS.py to test_CAPS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Cluster.py to test_Cluster.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_UniGene.py to test_UniGene.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez.py to test_Entrez.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Tutorial.py to test_Tutorial.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDBList.py to test_PDBList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_convert.py to test_SeqIO_convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phd.py to test_Phd.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_MafIO_index.py to test_MafIO_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_phenotype.py to test_phenotype.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_codonalign.py to test_codonalign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_mmtf_online.py to test_mmtf_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_online.py to test_SCOP_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prosite2.py to test_prosite2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Nexus.py to test_Nexus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Crystal.py to test_Crystal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_Polypetide.py to test_PDB_Polypetide.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_ResidueDepth.py to test_PDB_ResidueDepth.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CodonUsage.py to test_CodonUsage.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SffIO.py to test_SffIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_raxml_tool.py to test_raxml_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsBitmaps.py to test_GraphicsBitmaps.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/requires_wise.py to requires_wise.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_geo.py to test_geo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_trie.py to test_trie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Compass.py to test_Compass.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KDTree.py to test_KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Chi2.py to test_Chi2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_RCSBFormats.py to test_RCSBFormats.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBITextParser.py to test_NCBITextParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_psw.py to test_psw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_seq.py to test_seq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/common_BioSQL.py to common_BioSQL.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_pairwise2.py to test_pairwise2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_DSSP_tool.py to test_DSSP_tool.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prosite1.py to test_prosite1.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Emboss.py to test_Emboss.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KEGG.py to test_KEGG.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenBank_unittest.py to test_GenBank_unittest.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_kNN.py to test_kNN.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/seq_tests_common.py to seq_tests_common.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KeyWList.py to test_KeyWList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ProtParam.py to test_ProtParam.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Affy.py to test_Affy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Uniprot.py to test_Uniprot.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Wise.py to test_Wise.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ExPASy.py to test_ExPASy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_prodoc.py to test_prodoc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Consensus.py to test_Consensus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_bgzf.py to test_bgzf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_motifs_online.py to test_motifs_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_motifs.py to test_motifs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CelFile.py to test_CelFile.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Restriction.py to test_Restriction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_translate.py to test_translate.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_CodonTable.py to test_CodonTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO_PdbIO.py to test_SeqIO_PdbIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Tests/test_SeqIO.py to test_SeqIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.py to make_subsmat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/swissprot.py to swissprot.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.py to simplepredict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py to Proux_et_al_2002_Figure_6.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.py to fasta_dictionary.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/www_blast.py to www_blast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.py to ACT_example.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.py to clustal_run.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.py to fasta_iterator.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Doc/examples/getgene.py to getgene.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/REST.py to REST.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Mafft.py to _Mafft.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Prank.py to _Prank.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Dialign.py to _Dialign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Muscle.py to _Muscle.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Probcons.py to _Probcons.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/AbiIO.py to AbiIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PdbIO.py to PdbIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/IgIO.py to IgIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SwissIO.py to SwissIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/_index.py to _index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/Interfaces.py to Interfaces.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/QualityIO.py to QualityIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/_convert.py to _convert.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/PirIO.py to PirIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/TabIO.py to TabIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SffIO.py to SffIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqIO/AceIO.py to AceIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_io.py to _io.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXML.py to NeXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAO.py to CDAO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Consensus.py to Consensus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Newick.py to Newick.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Compass/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_py3k/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/SCOPData.py to SCOPData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/TogoWS/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/MarkovModel.py to MarkovModel.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/Reduced.py to Reduced.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Alphabet/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIXML.py to NCBIXML.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/Applications.py to Applications.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prosite.py to Prosite.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/CAPS/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Cluster/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/KGML_vis.py to KGML_vis.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/alignace.py to alignace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/thresholds.py to thresholds.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/meme.py to meme.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/transfac.py to transfac.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/minimal.py to minimal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/mast.py to mast.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/matrix.py to matrix.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.py to db.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Controller.py to Controller.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Nexus/StandardData.py to StandardData.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Index.py to Index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/kNN.py to kNN.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonseq.py to codonseq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalignment.py to codonalignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/chisq.py to chisq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalphabet.py to codonalphabet.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/pm_fitting.py to pm_fitting.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/phenotype/phen_micro.py to phen_micro.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Seq.py to Seq.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/UniProt/GOA.py to GOA.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/Applications.py to Applications.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/Primer3.py to Primer3.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmcifio.py to mmcifio.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/vectors.py to vectors.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/File.py to File.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/MafIO.py to MafIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/MauveIO.py to MauveIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/RanaConfig.py to RanaConfig.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction.py to Restriction.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/Restriction/PrintFormat.py to PrintFormat.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/bgzf.py to bgzf.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/triefind.py to triefind.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.py to _index.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.py to query.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.py to hit.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.py to _utils.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.pyc running install_egg_info Copying biopython.egg-info to /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info Skipping SOURCES.txt running install_scripts pybuild --install -i python{version} -p 3.7 --dest-dir /<>/python-biopython-1.73\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/python-biopython-1.73+dfsg/debian/tmp running install running build running build_py running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/BioSeq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/Loader.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/BioSeqDatabase.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/DBUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/BioSeqDatabase.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/DBUtils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/Loader.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/BioSeq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/BioSQL/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_35_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_005.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/mirna.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_003.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_001.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_003.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_002.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_34_004.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_004.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_35_002.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/pslx_34_005.pslx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blat/psl_35_001.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_pairwise_aligner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Muscle_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmp_MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/common_BioSQL_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/compound.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map03070.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.4letter -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/compound.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map00950.rea -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.irregular -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/map01100.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko00010.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko01100.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/enzyme.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko03070.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/gene.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/KEGG/ko00253.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/KEGG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_SeqXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/valine.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/lipoprotein.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/proline.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Enzymes/lactate.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Enzymes copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TogoWS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_align.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PopGen_GenePop_nodepend.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmpdirprankmsadQXIqG copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/test.fsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/no_smpl1.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/3100.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/fake.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/A6_1-DB3.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/3730.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/empty.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/310.ab1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Abi/test_data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Abi copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_FSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Mafft_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_networkx.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Compass/comtest1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Compass/comtest2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/search_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_features.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output.best.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/requires_internet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ClustalOmega_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp004 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp014 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp016 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/P84001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/keywlist2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/F2CXE6.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/R5HY77.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp012 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/H2CNN8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp009 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp005 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp010 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.gff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp007 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp006 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/Q13639.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp011 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp008 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp015 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.list -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/P97881.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.rdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/uni002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/sp013 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/multi_ex.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/keywlist.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/Q13639.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/F2CXE6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SwissProt/H2CNN8.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Application.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/run_tests.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenBank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_mysql_connector_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Probcons_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_platform.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM645.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM804.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_dual.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM700.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_family.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_series.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSE16.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_affy_chp.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/soft_ex_affy.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Geo/GSM691.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/gen_results.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/baseml/baseml_SE.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/bad_results.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00 creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/aa_alignment.phylip -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Alignments/longnames.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Alignments creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/lysin.trees -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/lysin.trees.4.6 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/bad.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Trees/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Trees creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model8.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/SE.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model5.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model0.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model6.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model7.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/model2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/baseml.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad3.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad2.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/bad1.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00 copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/yn00.ctl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PAML/Control_files/species.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/Control_files copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cellosaurus/cell_lines_2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cellosaurus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Medline.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SwissProt.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.cla.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/testDom.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/raftest.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.des.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SCOP/dir.hie.scop.txt_test -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Prank_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_mmtf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_QCPSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SubsMat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Location.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/FSSP/1cnv.fssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CAPS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Saf/saf1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Saf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Cluster.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/cw02.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/promals3d.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/odd_consensus.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/temp horses.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Clustalw/hedgehog.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Clustalw copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/.coveragerc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_UniGene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/cor6_6.db -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-sqlite.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-mysql.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BioSQL/biosqldb-pg.sql -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BioSQL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result3.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Medline/pubmed_result1.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/CDAO/test.cdao -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CDAO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/tmpdirprankmsaE8GHYF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00107.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00165.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00159.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00432.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00640.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00100.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00424.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00113.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00933.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00144.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00472.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00340.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00787.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/Doc/pdoc00149.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite/Doc copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00546.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Prosite/ps00488.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Prosite copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Tutorial.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_010.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_009.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_008.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_007.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_005.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_30_hmmscan_006.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Hmmer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_samtools_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/CodonUsage copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_EmbossPrimer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/InterProScan/test_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/InterProScan copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Scop.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/phyloxml_examples.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/made_up.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/apaf.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/bcl_2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/distribution.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PhyloXML/example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PhyloXML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Stockholm/simple.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Stockholm/funny.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Stockholm copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_sqlite3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_NCBI_qblast -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_CodonUsage -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Clustalw -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SeqIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GFF -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Fasttree_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_translate -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Location -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_geo -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GenBank -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_KEGG -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SubsMat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_SearchIO_legacy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_FSSP -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_HMMCasino -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_GFF2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_ClustalOmega_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_property_manager -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_File -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_AlignIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_align -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_Clustalw_tool -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_PDB -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output/test_AlignIO_MauveIO -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/output creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2201L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2215L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2222_blastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2220L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_010.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2216L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_006.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_006.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2222_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_009.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2102L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2220L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2228_tblastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2012L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/mirna.tab -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastp_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2014L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2208L_psiblast_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/wnts.xml.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2014L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2230_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_012.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2221L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/wnts.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_tblastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2218_blastp_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastp_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2011L_blastn_003.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_005.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_004.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2212L_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastn_005.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_013.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastn_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2228_tblastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastx_003.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2222L_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_tblastx_002.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_blastp_007.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastx_004.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2222_blastx_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/xml_2226_blastp_001.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_011.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_phiblast_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2202L_blastn_001.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2226_blastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/tab_2226_tblastn_008.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/text_2010L_tblastn_002.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/mirna.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Blast/html_msgid_29_blastx_001.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/EDD_RAT.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/seqs.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Registry/bt001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Registry copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_MafIO_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TCoffee_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Fasttree_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_phenotype.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_MySQLdb_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_psycopg2_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802lc.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/multi.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001422.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GFF/NC_001802x.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GFF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/sam2.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_header.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_refresh.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/readme.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/ex1_header.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam2.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/sam1.sam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam1_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SamBam/bam2_sorted.bam -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SamBam copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_codonalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_Insdc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_mmtf_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prosite2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Mdm_partial.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Hs.2.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniGene/Eca.1.2425.data -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_legacy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Crystal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/RepBase23.02.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DD231055_edited2.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/kipo_prt_sample.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/embl_with_0_line.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/TRBG361.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DD231055_edited.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/SC10H5.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/hla_3260_sample.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/AE017046.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/epo_prt_selection.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/AAA03323.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/Human_contigs.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/101ma_no_coords.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/location_wrap.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/U87107.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/A04195.imgt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/patents.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/DS830848.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/EMBL/xx_after_co.embl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/EMBL creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Affy/affy_v4_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Affy/affy_v3_example.CEL -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_Polypetide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/biosql.ini.appveyor -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Dialign_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/wrong_sequence_indent.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/gbvrl1_start.seq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/one_of.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/HM138502_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/pBAD30.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/1MRR_A.gp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_misc_feature.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_version.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/cor6_6.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/negative_location.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/KF527485_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/DS830848.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_loc_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/noref.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/protein_refseq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/blank_seq.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/no_end_marker.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/cor6_6.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/qualifier_escaping_write.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NT_019265.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NP_416719.gbwithparts -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/protein_refseq2.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/iro.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/qualifier_escaping_read.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/EU851978.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_product.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.gb.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_accession.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.ffn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.fna -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/no_origin_no_end.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/origin_line.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_005816.tsv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/arab1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/pri1.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/NC_000932.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/EU851978_output.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/dbsource_wrap.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/extra_keywords.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/empty_feature_qualifier.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/KF527485.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/HM138502.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_phenotype_fit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_raxml_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blat_psl_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsBitmaps.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/requires_wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_graphics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cluster/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Cluster/cyano.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_graphics_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/IntelliGenetics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa.bbcols -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa.backbone -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Mauve/simple.xmfa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Mauve copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_matplotlib.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/simple_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/random_organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_widths.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_circular.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/tRNA_chrom.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/multi_bar.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test_1.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_linear.svg -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/line_graph_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/spiral_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigils_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_labels.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_meth_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/square_test.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/scatter_test_7.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_region_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_meth_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map01100_transparency.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_colors.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/map03070_original.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/line_graph.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_circular.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_arrows.png -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/labels_default_c.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/organism.eps -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_by_obj_linear.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Motif/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Motif creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_none.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_q_multiple.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Exonerate/exn_22_m_ner.exn -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Exonerate copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BWA_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/tolweb.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/characters.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/meta_taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/edgelabels.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/trees-uris.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/taxa.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/treebase-record.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/trees.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/nexml.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/timetree.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/sets.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/phenoscape.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeXML/meta_types.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_geo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_trie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_mysql_connector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeuralNetwork/repeat.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NeuralNetwork/enolase.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NeuralNetwork creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/ExtendedPhylip/primates.phyx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/ExtendedPhylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_BioSQL_sqlite3_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Compass.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/protein_count.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/acc_rep_mat.pik -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/redAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/protein_freq.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/aaDistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SubsMat/redAltAADistrib.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme_v_4_11_4.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/alignace.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/transfac.dat -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.dna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.protein.tcm.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/REB1.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/mast.protein.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/SRF.pfm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/minimal_test.meme -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/Arnt.sites -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/motifs/meme.rna.oops.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo2.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c2line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c3line.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/big.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c3space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/c2space.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PopGen/haplo3.gen -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer2_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_RCSBFormats.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_fasta_m10_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBITextParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/test.new -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/test_Nexus_input.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/bats.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/codonposset.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Nexus/int_node_labels.nwk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/Cw_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/clustalw.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/DMA_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/B_nuc.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/NBRF/DMB_prot.pir -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/NBRF creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/rna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/global_species_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/protein_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/corrupt_example2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/corrupt_example1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/SeqXML/dna_example.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/SeqXML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_qblast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_fasta_m10.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Astral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/output.best.fas -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/consed_sample.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/seq.cap.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Ace/contig1.ace -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Ace creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Wise/human_114_g01_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Wise/human_114_g02_exons.fna_01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blast_xml_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsDistribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/common_BioSQL.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Clustalw_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqUtils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/test.log -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/msa.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/majority_ref.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/upgma.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/strict_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/consensus_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/adam_refs.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/nj.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/neighbor_trees.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/TreeConstruction/pars3.tre -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/TreeConstruction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_DSSP_tool.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KGML_nographics.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_id -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/drosophilla.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl2.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro1.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_nucl.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/egfr_pro.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro5.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro4.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl1.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/adh.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro2.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl5.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/pro3.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/codonalign/nucl4.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/Plate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/BadPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlate.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/phenotype/SmallPlate_2.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prosite1.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_exonerate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SCOP_Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Emboss.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KEGG.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/dups.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/aster_no_wrap.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output006.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output015.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/loveliesbleeding.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output016.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output010.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/phlox.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output012.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output007.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/lupine.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output009.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f003 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output013.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/lavender.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/sweetpea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/fa01 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output003.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/rosemary.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output014.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output005.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f002 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/rose.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output001.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/centaurea.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/README -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/f001 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/aster.pro -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/wisteria.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output008.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output011.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output004.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/output002.m10 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Fasta/elderberry.nu -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Fasta copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenBank_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/horses.tree -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/interlaced2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/hennigian.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/horses.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/sequential.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/reference_dna.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/interlaced.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/random.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/sequential2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phylip/reference_dna2.phy -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phylip creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/nucleotide1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/taxonomy.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/egquery2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/nucleotide2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/protein.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary7.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed3.html -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/ncbi_mim.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/pubmed1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esummary3.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/egquery1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink8.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/einfo4.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/journals.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch6.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/efetch_schemas.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/espell.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/epost1.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/esearch5.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Entrez/elink2.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_hmmer3_text_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_unit_sep.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_spaces.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/tricky.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example_dos.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_title.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_null.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_short_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_vtab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_double_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/longreads_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_del.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_plus.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example_dos.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_no_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_93.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_diff_ids.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_tabs.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_double_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_faked.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/example.fastq.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_space.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_rna_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/wrapping_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_long_qual.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_escape.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/misc_dna_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/zero_length.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_qual_tab.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_at_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/error_trunc_in_seq.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/seq_tests_common.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/UniProt/goa_yeast.gaf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Seq_objs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PDB_FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/bac_find.psearch -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/short.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/no_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/needle.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/water2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/alignret.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/cds_reverse.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/matcher_simple.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/bac_find.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/cds_forward.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/NirK.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/needle_asis.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/matcher_pair.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/NirK_full.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/water.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Emboss/internal_oligo.primer3 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Affy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/BWA copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Uniprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_write.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1MOM_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/3JQH.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/ions.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.xyzr -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2OFG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/dssp_xtra_Sander.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/occupancy.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.rsa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/a_structure.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4Q9R_min.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/alignment_file.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4ZHL.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1SSU_mod.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Sander_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2XHE.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2XHE.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4CUP.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1SSU_mod.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/a_structure.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG_noheader.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.mmtf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/lib_10_z_5.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4CUP.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1LCD.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.pdb -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1LCD.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Miller_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1A8O.asa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/4ZHL.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/Wilke_RASA.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/2BEG.dssp -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/PDB/1AS5.cif -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_blat_psl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Wise.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ExPASy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_HMMCasino.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SearchIO_model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/foki.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/bamii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/foki.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/bamii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/pvuii.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/taqi.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/cac81.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/crei.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/taqi.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/pvuii.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/crei.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Rebase/cac81.htm -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Rebase copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_EMBL_unittest.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_motifs_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_motifs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_NCBI_BLAST_tools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Phylo_NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta7.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta2.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta4.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta8.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta3.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/Meta6.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta9.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MetaTool/meta.out -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MetaTool creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/triple_sff_rel_paths.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/triple_sff.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/paired.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/README.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/greek.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Roche copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_translate.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SVDSuperimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/bundle_without_target.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_test.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/unfinished.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/humor.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/cnksr3.fa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/wrong_version.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/invalid.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/length_coords_mismatch.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/corrupt.idx -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/bug2453.maf -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/MAF copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GenomeDiagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_Entrez_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_PAML_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_GraphicsChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/biosql.ini.sample -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_KEGG_online.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Cluster.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer2_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_kNN.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_UniGene.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Nexus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenBank.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_QCPSuperimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Residues.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Application.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_interproscan_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_sqlite3.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_fasta_m10.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_mysql_connector.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/common_BioSQL_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Clustalw_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_PdbIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blat_psl_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer2_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_trie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_ClustalIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Cla.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_pairwise_aligner.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqUtils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez_parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_PhylipIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Restriction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CelFile.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBI_BLAST_tools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsChromosome.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Ace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SffIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqRecord.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_HMMGeneral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_DSSP_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/requires_wise.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/common_BioSQL.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prosite1.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_cellosaurus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_phenotype.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_Insdc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Uniprot.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_MafIO_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Emboss.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_fasta_m10_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsBitmaps.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TreeConstruction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_FSSP.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_xml_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Seq_objs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Location.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_vectors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_EmbossPrimer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_MySQLdb_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_LogisticRegression.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_bgzf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBITextParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate_vulgar_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_model.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_psw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_geo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBIXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_graphics.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CodonUsage.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KEGG_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenomeDiagram.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_FragmentMapper.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Medline.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BWA_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_raxml_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Des.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Fasttree_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prodoc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_RCSBFormats.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ExPASy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqFeature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Compass.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_motifs_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Muscle_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_lowess.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_mmtf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Astral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PAML_codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ProtParam.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_SeqXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_MauveIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_NeXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Tutorial.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_ResidueDepth.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_Polypetide.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ClustalOmega_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phd.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_QualityIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsGeneral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blast_tab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Scop.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GraphicsDistribution.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SVDSuperimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_mysql_connector_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_EmbossIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_samtools_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_codonalign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PhyloXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_ColorSpiral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_AbiIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_sqlite3_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_exonerate.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_networkx.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Probcons_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_legacy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_EMBL_unittest.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SubsMat.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_GenBank_unittest.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_MMCIFParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Dialign_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_align.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NaiveBayes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_translate.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_write.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/seq_tests_common.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KEGG.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_blat_psl.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TCoffee_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_StructureAlignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_pairwise2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_write.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_AlignIO_FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_Superimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Raf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Dom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_nographics.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KGML_graphics_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_motifs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Pathway.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PopGen_GenePop_nodepend.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/search_tests_common.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Entrez.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_KeyWList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Consensus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_CDAO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDB_MMCIF2Dict.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_phenotype_fit.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Mafft_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Phylo_matplotlib.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SeqIO_features.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Crystal.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_prosite2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_TogoWS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_tab_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SCOP_Hie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SwissProt.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_BioSQL_psycopg2_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_HMMCasino.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_PDBList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Wise.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_mmtf_online.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Chi2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CodonTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_File.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Affy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_CAPS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Enzyme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_seq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_SearchIO_hmmer3_text_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_NCBI_qblast.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/requires_internet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/__pycache__/test_Prank_tool.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_HMMGeneral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_AlignIO_EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO_PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd_454 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd_solexa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/Phd/phd1 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/Phd copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Tests/test_SeqIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.bz2 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/make_subsmat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/protein.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/swissprot.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.gz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/nmr/noed.xpk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/nmr/simplepredict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/my_blast.xml -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/alpha.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/Plates.csv -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk.bgz -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/opuntia.aln -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/PF05371_seed.sth -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/my_blat.psl -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/Proux_et_al_2002_Figure_6.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ec_5.4.2.2.txt -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/m_cold.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/beta.faa -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/.flake8 -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/fasta_dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/simple.dnd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/www_blast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ACT_example.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/clustal_run.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/fasta_iterator.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/getgene.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.fasta -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/examples/ls_orchid.gbk -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_pdb.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_motifs.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_advanced.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_kegg.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_annot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_entrez.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_introduction.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_searchio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_graphics.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_quick_start.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_align.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_appendix.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phenotype.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phylo.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cluster.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_popgen.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phylo.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_uniprot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seqio.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_testing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_appendix.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cluster.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_learning.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_introduction.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seqio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_blast.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_motifs.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_kegg.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_objects.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_contributing.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_graphics.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_align.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_quick_start.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_objects.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_learning.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_entrez.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_seq_annot.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_advanced.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cookbook.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_searchio.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_cookbook.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_contributing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_phenotype.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_blast.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_pdb.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_testing.aux -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_popgen.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Doc/Tutorial/chapter_uniprot.tex -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/Tutorial creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/KGML_pathway.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/KGML_parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/KGML_pathway.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/KGML_parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/KGML/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Gene/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Map/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Compound/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/REST.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/Enzyme/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__pycache__/REST.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KEGG/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/triemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/AlignInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Clustalw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Mafft.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_ClustalOmega.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Prank.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_MSAProbs.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Dialign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Muscle.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_Probcons.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/_TCoffee.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Probcons.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Muscle.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_TCoffee.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Clustalw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_MSAProbs.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Dialign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Prank.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_ClustalOmega.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/_Mafft.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Align/__pycache__/AlignInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/AbiIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PdbIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/IgIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PhdIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SwissIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/UniprotIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/QualityIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/_convert.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/PirIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/TabIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SffIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/SeqXmlIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/InsdcIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/AceIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/TabIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/UniprotIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/QualityIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/AbiIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/IgIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SeqXmlIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SffIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/InsdcIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PhdIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PdbIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/PirIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/AceIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/_convert.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/SwissIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqIO/__pycache__/Interfaces.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/CDAOIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_io.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/BaseTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/chi2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/codeml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_baseml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_paml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/_parse_yn00.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_paml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_yn00.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_codeml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/_parse_baseml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PAML/__pycache__/chi2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PhyloXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NeXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/CDAO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Consensus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Newick.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/PhyloXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/_cdao_owl.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Fasttree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Phyml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/_Raxml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Phyml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Fasttree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/Applications/__pycache__/_Raxml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NewickIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/TreeConstruction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/NeXMLIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_io.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/Newick.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/TreeConstruction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/BaseTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/PhyloXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/Consensus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NeXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NeXMLIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/CDAOIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NewickIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/_cdao_owl.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/NexusIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/PhyloXMLIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Phylo/__pycache__/CDAO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Compass/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_py3k/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/KeyWList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__pycache__/KeyWList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SwissProt/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqFeature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Crystal/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/CodonTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/SCOPData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/IUPACData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/IUPACData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/SCOPData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/CodonTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Data/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Geo/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/Utilities.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/Trainer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/DynamicProgramming.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/Utilities.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/Trainer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/DynamicProgramming.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/HMM/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/TogoWS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/MarkovModel.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/Reduced.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/IUPAC.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/IUPAC.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/Reduced.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Alphabet/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Des.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Dom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Raf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Cla.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Residues.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/Hie.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Des.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Cla.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Dom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Raf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Residues.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/Hie.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SCOP/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/fssp_rec.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/FSSPTools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/FSSPTools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/fssp_rec.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/FSSP/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Medline/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Application/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/NCBIXML.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/ParseBlastTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/NCBIWWW.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/Applications.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/NCBIXML.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/NCBIWWW.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Blast/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/MeltingTemp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CheckSum.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CodonUsage.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/lcc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/ProtParamData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/IsoelectricPoint.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/ProtParam.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/CodonUsageIndices.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/ProtParam.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CodonUsageIndices.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/lcc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CodonUsage.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/CheckSum.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/MeltingTemp.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/ProtParamData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/IsoelectricPoint.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqUtils/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/NOEtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/xpktools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__pycache__/xpktools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NMR/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Enzyme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/cellosaurus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Prosite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/Prodoc.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/ScanProsite.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/cellosaurus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Enzyme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Prodoc.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/Prosite.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/ExPASy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/CAPS/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/MultiGraph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/MultiGraph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/Graph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/Rep/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Pathway/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniGene/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/lowess.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__pycache__/lowess.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Statistics/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2module.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/CelFile.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__pycache__/CelFile.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Affy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Record.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/Scanner.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/Scanner.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/GenBank/__pycache__/Record.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/clustermodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/cluster.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/cluster.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Cluster/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Feature.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Track.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Colors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Graph.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_Diagram.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Feature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_LinearDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Graph.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_CrossLink.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Track.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_GraphSet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Colors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_Diagram.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_FeatureSet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_AbstractDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/GenomeDiagram/__pycache__/_CircularDrawer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/KGML_vis.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/DisplayRepresentation.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/ColorSpiral.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/BasicChromosome.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/Comparative.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/Distribution.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/KGML_vis.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/BasicChromosome.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/Distribution.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/Comparative.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/ColorSpiral.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/DisplayRepresentation.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Graphics/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SVDSuperimposer/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/pairwise2.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/FreqTable.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/MatrixInfo.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/MatrixInfo.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/FreqTable.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SubsMat/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/_xxmotif.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__pycache__/_xxmotif.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/alignace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/thresholds.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/_pwm.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/meme.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/transfac.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/minimal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/mast.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/matrix.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/db.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/jaspar/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/meme.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/matrix.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/minimal.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/mast.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/thresholds.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/alignace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/transfac.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/motifs/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/FileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/Utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/EasyController.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/LargeFileParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/Controller.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__pycache__/FileParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/GenePop/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PopGen/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Trees.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Nodes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/Nexus.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/StandardData.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/StandardData.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Nexus.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Trees.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/Nodes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Nexus/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/NaiveBayes.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SeqRecord.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Ace.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_Novoalign.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_samtools.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/_bwa.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_Novoalign.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_bwa.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/_samtools.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Applications/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/Phd.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/Phd.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/Ace.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Sequencing/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/trie.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/dnal.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/psw.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__pycache__/psw.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Wise/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/kNN.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonseq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonalignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/chisq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/codonalphabet.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/chisq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonseq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonalphabet.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/codonalignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/codonalign/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/pm_fitting.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/phen_micro.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/phen_micro.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/pm_fitting.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/phenotype/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Seq.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/Parser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/XSDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/XSDs/IPGReportSet.xsd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomopf.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/htmltable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mmlalias.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/notat.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/esearch.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/articlemeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/taxon.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsb.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/GenBank_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsc.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/SP_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/chars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/math.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/default-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NSE.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mmlextra.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pmc-1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/phrase.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/backmatter.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/format.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isolat1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eInfo_020511.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/einfo.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/list.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/journalmeta.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eLink_090910.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NSE.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eLink_101123.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamso.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk3.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isodia.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PIR_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSummary_041029.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isonum.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomfrk.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/para.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isopub.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_190101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/elink_020122.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/default-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivearticle.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/section.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PRF_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isolat2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isomscr.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isobox.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/EMBL_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/egquery.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Project.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/eSpell.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/common.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/references.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isotech.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_130101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/display.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/OMSSA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/modules.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isogrk4.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isocyr1.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isocyr2.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/link.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-models.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsa.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/isoamsn.ent -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/PDB_General.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__pycache__/Parser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Entrez/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/GOA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__pycache__/GOA.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/UniProt/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/Applications.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/Primer3.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/PrimerSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/Applications.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/Primer3.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/PrimerSearch.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Emboss/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/AbstractPropertyMap.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureBuilder.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Superimposer.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Dice.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/StructureAlignment.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Polypeptide.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/NeighborSearch.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Structure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/parse_pdb_header.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/ResidueDepth.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/HSExposure.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/FragmentMapper.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/MMCIFParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/QCPSuperimposer/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Vector.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Residue.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmcifio.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/NACCESS.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Chain.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBList.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/DefaultParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/mmtf/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Selection.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/DSSP.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/MMCIF2Dict.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBParser.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Model.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/vectors.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PSEA.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Atom.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/Entity.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/PDBExceptions.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/mmcifio.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/MMCIF2Dict.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/StructureAlignment.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Residue.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Selection.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Dice.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Vector.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/DSSP.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Model.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/AbstractPropertyMap.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/MMCIFParser.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/vectors.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/ResidueDepth.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Structure.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/HSExposure.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Polypeptide.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/NACCESS.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBExceptions.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/FragmentMapper.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/NeighborSearch.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBList.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/StructureBuilder.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Chain.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/parse_pdb_header.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Atom.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/PDBIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Entity.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/PDB/__pycache__/Superimposer.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/File.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/LogisticRegression.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/MaxEntropy.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/StockholmIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/Interfaces.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/EmbossIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/ClustalIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/NexusIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/MafIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/MauveIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/PhylipIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/EmbossIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/PhylipIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/StockholmIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/ClustalIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/MafIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/NexusIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/MauveIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/AlignIO/__pycache__/Interfaces.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/Neighbor.h -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTree.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/KDTreemodule.c -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__pycache__/KDTree.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/KDTree/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/Restriction_Dictionary.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/RanaConfig.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/Restriction.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/PrintFormat.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/Restriction.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/RanaConfig.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/PrintFormat.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/Restriction_Dictionary.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/Restriction/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/bgzf.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/triefind.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/SeqFeature.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/pairwise2.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/triefind.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/MarkovModel.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/MaxEntropy.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/Seq.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/LogisticRegression.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/kNN.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/bgzf.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/File.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/NaiveBayes.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/SeqRecord.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_vulgar.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_cigar.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/ExonerateIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_index.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/FastaIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/NCBIStandalone.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/ParserSupport.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/ParserSupport.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/NCBIStandalone.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_legacy/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/query.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/hit.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/hsp.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/hit.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/hsp.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/query.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_model/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/blast_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlastIO/__pycache__/blast_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/_base.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/_base.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_domtab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer2_text.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_tab.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/HmmerIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__init__.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__pycache__/interproscan_xml.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/InterproscanIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/_utils.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/BlatIO.py -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/_index.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/BlatIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/_utils.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/FastaIO.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/Bio/SearchIO/__pycache__/__init__.cpython-37.pyc -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__pycache__ creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez/XSDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/biopython/Bio/Entrez/DTDs creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.config/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/methods creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/mcoffee creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/plugins creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.t_coffee/plugins/linux creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib creating /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib/tex.cache copying /<>/python-biopython-1.73+dfsg/.pybuild/cpython3_3.7/build/home/.cache/matplotlib/fontlist-v300.json -> /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/home/.cache/matplotlib byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/BioSeq.py to BioSeq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/Loader.py to Loader.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/BioSQL/DBUtils.py to DBUtils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Muscle_tool.py to test_Muscle_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_SeqXML.py to test_SeqIO_SeqXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_align.py to test_align.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_lowess.py to test_lowess.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_FSSP.py to test_FSSP.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/requires_internet.py to requires_internet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Application.py to test_Application.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Ace.py to test_Ace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/run_tests.py to run_tests.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py to test_BioSQL_mysql_connector_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_text.py to test_SearchIO_blast_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Medline.py to test_Medline.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_File.py to test_File.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_mmtf.py to test_mmtf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_QCPSuperimposer.py to test_QCPSuperimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SubsMat.py to test_SubsMat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB.py to test_PDB.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Location.py to test_Location.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CAPS.py to test_CAPS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Cluster.py to test_Cluster.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_UniGene.py to test_UniGene.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDBList.py to test_PDBList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_convert.py to test_SeqIO_convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phd.py to test_Phd.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_MafIO_index.py to test_MafIO_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_codonalign.py to test_codonalign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_mmtf_online.py to test_mmtf_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_online.py to test_SCOP_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prosite2.py to test_prosite2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Crystal.py to test_Crystal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_Polypetide.py to test_PDB_Polypetide.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_ResidueDepth.py to test_PDB_ResidueDepth.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CodonUsage.py to test_CodonUsage.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SffIO.py to test_SffIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_raxml_tool.py to test_raxml_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsBitmaps.py to test_GraphicsBitmaps.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/requires_wise.py to requires_wise.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_geo.py to test_geo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_trie.py to test_trie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Compass.py to test_Compass.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KDTree.py to test_KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_RCSBFormats.py to test_RCSBFormats.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBITextParser.py to test_NCBITextParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_psw.py to test_psw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_seq.py to test_seq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_DSSP_tool.py to test_DSSP_tool.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prosite1.py to test_prosite1.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Emboss.py to test_Emboss.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KEGG.py to test_KEGG.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenBank_unittest.py to test_GenBank_unittest.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_kNN.py to test_kNN.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/seq_tests_common.py to seq_tests_common.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KeyWList.py to test_KeyWList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ProtParam.py to test_ProtParam.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Affy.py to test_Affy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Uniprot.py to test_Uniprot.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Wise.py to test_Wise.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_prodoc.py to test_prodoc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Consensus.py to test_Consensus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_bgzf.py to test_bgzf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_motifs.py to test_motifs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CelFile.py to test_CelFile.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Restriction.py to test_Restriction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_translate.py to test_translate.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO_PdbIO.py to test_SeqIO_PdbIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/make_subsmat.py to make_subsmat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/swissprot.py to swissprot.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/nmr/simplepredict.py to simplepredict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py to Proux_et_al_2002_Figure_6.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/fasta_dictionary.py to fasta_dictionary.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/www_blast.py to www_blast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/ACT_example.py to ACT_example.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/clustal_run.py to clustal_run.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/fasta_iterator.py to fasta_iterator.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Doc/examples/getgene.py to getgene.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Gene/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Map/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Compound/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/REST.py to REST.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KEGG/Enzyme/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/AlignInfo.py to AlignInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Mafft.py to _Mafft.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Prank.py to _Prank.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Dialign.py to _Dialign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Muscle.py to _Muscle.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_Probcons.py to _Probcons.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/AbiIO.py to AbiIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PdbIO.py to PdbIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/IgIO.py to IgIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PhdIO.py to PhdIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SwissIO.py to SwissIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/_index.py to _index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/Interfaces.py to Interfaces.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/QualityIO.py to QualityIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/_convert.py to _convert.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/PirIO.py to PirIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/TabIO.py to TabIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SffIO.py to SffIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqIO/AceIO.py to AceIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_io.py to _io.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NeXML.py to NeXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/CDAO.py to CDAO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Consensus.py to Consensus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Newick.py to Newick.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Compass/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_py3k/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqFeature.py to SeqFeature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Crystal/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/CodonTable.py to CodonTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/SCOPData.py to SCOPData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/IUPACData.py to IUPACData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Data/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Geo/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/Utilities.py to Utilities.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/Trainer.py to Trainer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/TogoWS/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/MarkovModel.py to MarkovModel.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/Reduced.py to Reduced.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/IUPAC.py to IUPAC.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Alphabet/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Des.py to Des.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Dom.py to Dom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Raf.py to Raf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Cla.py to Cla.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Residues.py to Residues.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SCOP/Hie.py to Hie.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/fssp_rec.py to fssp_rec.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/FSSP/FSSPTools.py to FSSPTools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Medline/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Application/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/NCBIXML.py to NCBIXML.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/Applications.py to Applications.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CheckSum.py to CheckSum.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/lcc.py to lcc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/ProtParam.py to ProtParam.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NMR/xpktools.py to xpktools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/CAPS/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Pathway/Rep/Graph.py to Graph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniGene/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Statistics/lowess.py to lowess.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Affy/CelFile.py to CelFile.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/Record.py to Record.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/utils.py to utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/GenBank/Scanner.py to Scanner.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Cluster/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/KGML_vis.py to KGML_vis.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/Comparative.py to Comparative.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Graphics/Distribution.py to Distribution.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SVDSuperimposer/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/pairwise2.py to pairwise2.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/FreqTable.py to FreqTable.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/alignace.py to alignace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/thresholds.py to thresholds.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/meme.py to meme.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/transfac.py to transfac.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/minimal.py to minimal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/mast.py to mast.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/matrix.py to matrix.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/db.py to db.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/motifs/jaspar/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/Utils.py to Utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PopGen/GenePop/Controller.py to Controller.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Trees.py to Trees.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Nodes.py to Nodes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/Nexus.py to Nexus.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Nexus/StandardData.py to StandardData.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SeqRecord.py to SeqRecord.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Ace.py to Ace.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Sequencing/Phd.py to Phd.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Index.py to Index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/dnal.py to dnal.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Wise/psw.py to psw.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/kNN.py to kNN.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonseq.py to codonseq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonalignment.py to codonalignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/chisq.py to chisq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/codonalign/codonalphabet.py to codonalphabet.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/pm_fitting.py to pm_fitting.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/phenotype/phen_micro.py to phen_micro.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Seq.py to Seq.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Entrez/Parser.py to Parser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/UniProt/GOA.py to GOA.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/Applications.py to Applications.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/Primer3.py to Primer3.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Superimposer.py to Superimposer.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Dice.py to Dice.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBIO.py to PDBIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Polypeptide.py to Polypeptide.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Structure.py to Structure.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/HSExposure.py to HSExposure.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Vector.py to Vector.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Residue.py to Residue.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmcifio.py to mmcifio.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/NACCESS.py to NACCESS.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Chain.py to Chain.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBList.py to PDBList.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Selection.py to Selection.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/DSSP.py to DSSP.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBParser.py to PDBParser.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Model.py to Model.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/vectors.py to vectors.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PSEA.py to PSEA.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Atom.py to Atom.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/Entity.py to Entity.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/File.py to File.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/MaxEntropy.py to MaxEntropy.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/Interfaces.py to Interfaces.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/NexusIO.py to NexusIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/MafIO.py to MafIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/MauveIO.py to MauveIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/KDTree.py to KDTree.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/KDTree/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/RanaConfig.py to RanaConfig.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/Restriction.py to Restriction.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/Restriction/PrintFormat.py to PrintFormat.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/bgzf.py to bgzf.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/triefind.py to triefind.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_index.py to _index.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/query.py to query.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/hit.py to hit.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_model/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/_utils.py to _utils.cpython-37.pyc byte-compiling /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-37.pyc running install_egg_info Copying biopython.egg-info to /<>/python-biopython-1.73+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/biopython-1.73.egg-info Skipping SOURCES.txt running install_scripts dh_numpy -ppython-biopython (grep -a -s -v python:Depends debian/python-biopython.substvars; echo "python:Depends=python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9") > debian/python-biopython.substvars.new mv debian/python-biopython.substvars.new debian/python-biopython.substvars dh_numpy3 -ppython3-biopython (grep -a -s -v python3:Depends debian/python3-biopython.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biopython.substvars.new mv debian/python3-biopython.substvars.new debian/python3-biopython.substvars make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_install -O--buildsystem=pybuild install -d debian/python-biopython//usr/lib/python2.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python2.7/dist-packages/Bio debian/tmp/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info debian/python-biopython//usr/lib/python2.7/dist-packages/ install -d debian/.debhelper/generated/python-biopython install -d debian/python3-biopython//usr/lib/python3.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python3.7/dist-packages/Bio debian/tmp/usr/lib/python3.7/dist-packages/biopython-1.73.egg-info debian/python3-biopython//usr/lib/python3.7/dist-packages/ install -d debian/.debhelper/generated/python3-biopython install -d debian/.debhelper/generated/python-biopython-doc install -d debian/python-biopython-sql//usr/lib/python2.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python2.7/dist-packages/BioSQL debian/python-biopython-sql//usr/lib/python2.7/dist-packages/ install -d debian/.debhelper/generated/python-biopython-sql install -d debian/python3-biopython-sql//usr/lib/python3.7/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python3.7/dist-packages/BioSQL debian/python3-biopython-sql//usr/lib/python3.7/dist-packages/ install -d debian/.debhelper/generated/python3-biopython-sql rm -f debian/python-biopython-doc.debhelper.log debian/python-biopython-sql.debhelper.log debian/python-biopython.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_installdocs -i install -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc install -d debian/python-biopython-doc/usr/share/doc/python-biopython cd './Doc/..' && find 'Doc' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython cp --reflink=auto -a ./debian/README.test debian/python-biopython-doc/usr/share/doc/python-biopython cp --reflink=auto -a ./debian/tests/run-unit-test debian/python-biopython-doc/usr/share/doc/python-biopython cd './debian/Tests_fixme/..' && find 'Tests_fixme' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython chown -R 0:0 debian/python-biopython-doc/usr/share/doc chmod -R u\+rw,go=rX debian/python-biopython-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biopython-doc/usr/share/doc/python-biopython-doc/copyright install -d debian/python-biopython-doc/usr/share/doc-base/ install -p -m0644 debian/python-biopython-doc.doc-base debian/python-biopython-doc/usr/share/doc-base/biopython-tutorial install -d debian/python-biopython-sql/usr/share/doc/python-biopython-sql install -p -m0644 debian/copyright debian/python-biopython-sql/usr/share/doc/python-biopython-sql/copyright install -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql install -p -m0644 debian/copyright debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/copyright find debian -name __pycache__ -type d | xargs rm -rf find debian -name example.fastq.gz debian/tmp/usr/lib/python3.7/dist-packages/Tests/Quality/example.fastq.gz debian/tmp/usr/lib/python2.7/dist-packages/Tests/Quality/example.fastq.gz # dh_installdocs seems to refuse copying zero length files (for instance Tests/Blast/tab_2226_tblastn_002.txt) but these are needed for the tests as well cp -a debian/tmp_tests/* /<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/ find debian -name .cvsignore -delete # no idea why Doc dir ends up in /usr/share/doc/python-biopython since biopython 1.71 - just move it into right place if [ -d debian/python-biopython-doc/usr/share/doc/python-biopython/Doc ] ; then \ mv debian/python-biopython-doc/usr/share/doc/python-biopython/Doc debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc ; \ fi cd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc && make clean make[2]: Entering directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc' make -C install make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/install' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/install' ( for f in install ; do make clean -C $f ; done ) make[3]: Entering directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/install' rm -f Installation.aux rm -f Installation.log rm -f Installation.out rm -f Installation.toc rm -f Installation.haux rm -f Installation.htoc make[3]: Leaving directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/install' rm -f Tutorial.aux rm -f Tutorial.toc rm -f Tutorial.log rm -f Tutorial.out rm -f Tutorial.haux rm -f Tutorial.htoc rm -f biopdb_faq.aux rm -f biopdb_faq.log rm -f biopdb_faq.out rm -f Tutorial/*.aux make[2]: Leaving directory '/<>/python-biopython-1.73+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc' find debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc -name Makefile -delete find debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc -name "*.aux" -delete find debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc -name "*.lyx" -delete find debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc -type d -empty -delete make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_installdocs -O--buildsystem=pybuild -Npython-biopython-doc -Npython-biopython-sql -Npython3-biopython-sql install -d debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./CONTRIB.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./CONTRIBUTING.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./DEPRECATED.rst debian/python-biopython/usr/share/doc/python-biopython cp --reflink=auto -a ./NEWS.rst debian/python-biopython/usr/share/doc/python-biopython chown -R 0:0 debian/python-biopython/usr/share/doc chmod -R u\+rw,go=rX debian/python-biopython/usr/share/doc install -p -m0644 debian/README.Debian debian/python-biopython/usr/share/doc/python-biopython/README.Debian install -p -m0644 debian/copyright debian/python-biopython/usr/share/doc/python-biopython/copyright install -d debian/python3-biopython/usr/share/doc/python3-biopython install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/changelog.Debian install -p -m0644 debian/changelog debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian install -p -m0644 debian/changelog debian/python-biopython-sql/usr/share/doc/python-biopython-sql/changelog.Debian install -p -m0644 debian/changelog debian/python-biopython/usr/share/doc/python-biopython/changelog.Debian install -p -m0644 debian/changelog debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian dh_python2 -O--buildsystem=pybuild D: dh_python2 dh_python2:393: version: 3.20180927ubuntu2 D: dh_python2 dh_python2:394: argv: ['/usr/share/dh-python/dh_python2', '-O--buildsystem=pybuild'] D: dh_python2 dh_python2:395: options: {'guess_versions': True, 'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'namespaces': None, 'clean_pycentral': False, 'shebang': None, 'ignore_shebangs': False, 'ignore_namespace': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python2 dh_python2:396: args: [] D: dh_python2 dh_python2:398: supported Python versions: 2.7 (default=2.7) D: dh_python2 debhelper:107: skipping package: python3-biopython D: dh_python2 debhelper:107: skipping package: python3-biopython-sql D: dh_python2 debhelper:153: source=python-biopython, binary packages=['python-biopython', 'python-biopython-doc', 'python-biopython-sql'] D: dh_python2 dh_python2:415: processing package python-biopython... D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/File.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Index.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/LogisticRegression.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/MarkovModel.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/MaxEntropy.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/NaiveBayes.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Seq.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqFeature.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqRecord.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/_utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/bgzf.pyc D: dh_python2 tools:230: invoking: python2.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python2 fs:329: renaming cpairwise2.so to cpairwise2.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/kNN.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/pairwise2.pyc I: dh_python2 fs:329: renaming trie.so to trie.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/triefind.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/REST.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_parser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Map/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/AlignInfo.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/__init__.pyc I: dh_python2 fs:329: renaming _aligners.so to _aligners.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_ClustalOmega.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Clustalw.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Dialign.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_MSAProbs.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Mafft.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Muscle.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Prank.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Probcons.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/_TCoffee.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/Applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/AbiIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/AceIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/IgIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/InsdcIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/Interfaces.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/PdbIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/PhdIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/PirIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/QualityIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/SeqXmlIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/SffIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/SwissIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/TabIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/UniprotIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/_convert.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqIO/_index.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/BaseTree.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/CDAOIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Consensus.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXML.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/NeXMLIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Newick.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/NewickIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/NexusIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXML.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXMLIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/TreeConstruction.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/_cdao_owl.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/_io.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/_utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_paml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/baseml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/chi2.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/codeml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/yn00.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Fasttree.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Phyml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Raxml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Compass/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/_py3k/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SwissProt/KeyWList.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SwissProt/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Crystal/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Data/CodonTable.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Data/IUPACData.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Data/SCOPData.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Data/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Geo/Record.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Geo/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/HMM/DynamicProgramming.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/HMM/MarkovModel.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/HMM/Trainer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/HMM/Utilities.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/HMM/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/TogoWS/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Alphabet/IUPAC.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Alphabet/Reduced.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Alphabet/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Cla.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Des.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Dom.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Hie.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Raf.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/Residues.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SCOP/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/FSSP/FSSPTools.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/FSSP/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/FSSP/fssp_rec.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Medline/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Application/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/Applications.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIWWW.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/NCBIXML.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/ParseBlastTable.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/Record.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Blast/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CheckSum.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsage.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/MeltingTemp.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParam.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParamData.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SeqUtils/lcc.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/NMR/NOEtools.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/NMR/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/NMR/xpktools.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/Enzyme.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prodoc.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/Prosite.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/ScanProsite.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/ExPASy/cellosaurus.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/CAPS/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Pathway/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/Graph.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/MultiGraph.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/UniGene/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Statistics/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Statistics/lowess.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Affy/CelFile.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Affy/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/GenBank/Record.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/GenBank/Scanner.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/GenBank/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/GenBank/utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/__init__.pyc I: dh_python2 fs:329: renaming _cluster.so to _cluster.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/BasicChromosome.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/ColorSpiral.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/Comparative.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/DisplayRepresentation.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/Distribution.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/KGML_vis.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SubsMat/FreqTable.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SubsMat/MatrixInfo.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SubsMat/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/__init__.pyc I: dh_python2 fs:329: renaming _pwm.so to _pwm.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/alignace.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/mast.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/matrix.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/meme.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/minimal.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/thresholds.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/transfac.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Controller.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/EasyController.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/FileParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/Nexus.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/Nodes.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/StandardData.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/Trees.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/__init__.pyc I: dh_python2 fs:329: renaming cnexus.so to cnexus.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_bwa.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_samtools.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Wise/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Wise/dnal.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Wise/psw.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/codonalign/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/codonalign/chisq.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalignment.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/codonalign/codonalphabet.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/codonalign/codonseq.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/phenotype/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/phenotype/phen_micro.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/phenotype/pm_fitting.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/Parser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/UniProt/GOA.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/UniProt/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/Applications.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/Primer3.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/PrimerSearch.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Emboss/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/AbstractPropertyMap.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Atom.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Chain.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Dice.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Entity.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/MMCIFParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Model.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/PSEA.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Residue.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/ResidueDepth.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Selection.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Structure.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Superimposer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/Vector.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/__init__.pyc I: dh_python2 fs:329: renaming kdtrees.so to kdtrees.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmcifio.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/parse_pdb_header.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/vectors.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.pyc I: dh_python2 fs:329: renaming qcprotmodule.so to qcprot.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/DefaultParser.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/MafIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/MauveIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.pyc I: dh_python2 fs:329: renaming _CKDTree.so to _CKDTree.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/PrintFormat.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/RanaConfig.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction_Dictionary.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Restriction/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.pyc D: dh_python2 fs:246: package python-biopython details = {'requires.txt': {'debian/python-biopython/usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('2.7')}, 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biopython D: dh_python2 pydist:137: trying to find dependency for numpy (python=2.7) D: dh_python2 depends:272: D={'python-numpy', 'python:any', 'python:any (<< 2.8)', 'python (>= 2.7~)', 'python:any (>= 2.7~)', 'python (<< 2.8)'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python2 dh_python2:415: processing package python-biopython-doc... D: dh_python2 fs:246: package python-biopython-doc details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biopython-doc D: dh_python2 depends:272: D=set(); R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python2 dh_python2:415: processing package python-biopython-sql... D: dh_python2 fs:195: removing unwanted: debian/python-biopython-sql/usr/lib/python2.7/dist-packages/BioSQL/BioSeq.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython-sql/usr/lib/python2.7/dist-packages/BioSQL/BioSeqDatabase.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython-sql/usr/lib/python2.7/dist-packages/BioSQL/DBUtils.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython-sql/usr/lib/python2.7/dist-packages/BioSQL/Loader.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biopython-sql/usr/lib/python2.7/dist-packages/BioSQL/__init__.pyc D: dh_python2 fs:246: package python-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biopython-sql D: dh_python2 depends:272: D={'python:any', 'python:any (>= 2.7~)', 'python:any (<< 2.8)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20180927ubuntu2 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:107: skipping package: python-biopython D: dh_python3 debhelper:107: skipping package: python-biopython-doc D: dh_python3 debhelper:107: skipping package: python-biopython-sql D: dh_python3 debhelper:153: source=python-biopython, binary packages=['python3-biopython', 'python3-biopython-sql'] D: dh_python3 dh_python3:183: processing package python3-biopython... D: dh_python3 fs:49: moving files from debian/python3-biopython/usr/lib/python3.7/dist-packages to debian/python3-biopython/usr/lib/python3/dist-packages/ D: dh_python3 fs:246: package python3-biopython details = {'requires.txt': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.73.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biopython D: dh_python3 pydist:137: trying to find dependency for numpy (python=None) D: dh_python3 depends:272: D={'python3 (<< 3.8)', 'python3-numpy', 'python3:any', 'python3 (>= 3.7~)'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package python3-biopython-sql... D: dh_python3 fs:49: moving files from debian/python3-biopython-sql/usr/lib/python3.7/dist-packages to debian/python3-biopython-sql/usr/lib/python3/dist-packages/ D: dh_python3 fs:246: package python3-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biopython-sql D: dh_python3 depends:272: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -d debian/python-biopython-doc/usr/share/lintian/overrides install -p -m0644 debian/python-biopython-doc.lintian-overrides debian/python-biopython-doc/usr/share/lintian/overrides/python-biopython-doc dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd ln -s ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd rm -f debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd ln -s ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd dh_strip_nondeterminism -O--buildsystem=pybuild Using 1551727292 as canonical time Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_simple.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_s.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-rooted.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear_nice.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/BlastRecord.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/SRR001666.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-dot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/dot_plot_scatter.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_heads.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigils.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_shafts.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/gc_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/hist_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-color.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/PSIBlastRecord.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_m.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_l.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular_nice.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/dot_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_labels.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf-zoom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-color-draw.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/smcra.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-draw-example.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl2a.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-simple-draw.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_xs.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python-biopython cd debian/python-biopython-doc cd debian/python3-biopython-sql chmod a-x usr/share/doc/python3-biopython-sql/changelog.Debian chmod a-x usr/share/doc/python-biopython/CONTRIB.rst usr/share/doc/python-biopython/CONTRIBUTING.rst usr/share/doc/python-biopython/DEPRECATED.rst usr/share/doc/python-biopython/NEWS.rst usr/share/doc/python-biopython/changelog.Debian gzip -9nf usr/share/doc/python3-biopython-sql/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' gzip -9nf usr/share/doc/python-biopython/CONTRIB.rst usr/share/doc/python-biopython/CONTRIBUTING.rst usr/share/doc/python-biopython/DEPRECATED.rst usr/share/doc/python-biopython/NEWS.rst usr/share/doc/python-biopython/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' cd debian/python3-biopython chmod a-x usr/share/doc/python3-biopython/changelog.Debian gzip -9nf usr/share/doc/python3-biopython/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' chmod a-x usr/share/doc/python-biopython-doc/Doc/Tutorial.pdf usr/share/doc/python-biopython-doc/Doc/Tutorial.tex usr/share/doc/python-biopython-doc/Doc/Tutorial.txt usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_advanced.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_align.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_blast.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cluster.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_contributing.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cookbook.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_entrez.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_graphics.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_introduction.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_kegg.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_learning.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_motifs.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_pdb.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phenotype.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phylo.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_popgen.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_quick_start.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_searchio.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_annot.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_objects.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seqio.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_testing.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_uniprot.tex usr/share/doc/python-biopython-doc/Doc/api/conf.py usr/share/doc/python-biopython-doc/Doc/biopdb_faq.pdf usr/share/doc/python-biopython-doc/Doc/biopdb_faq.tex usr/share/doc/python-biopython-doc/Doc/cookbook/Restriction/Restriction.md usr/share/doc/python-biopython-doc/Doc/doc.rst usr/share/doc/python-biopython-doc/Doc/doc.tex usr/share/doc/python-biopython-doc/Doc/examples/ACT_example.py usr/share/doc/python-biopython-doc/Doc/examples/Plates.csv usr/share/doc/python-biopython-doc/Doc/examples/Proux_et_al_2002_Figure_6.py usr/share/doc/python-biopython-doc/Doc/examples/ec_5.4.2.2.txt usr/share/doc/python-biopython-doc/Doc/examples/getgene.py usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.fasta usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.bgz usr/share/doc/python-biopython-doc/Doc/examples/my_blast.xml usr/share/doc/python-biopython-doc/Doc/examples/nmr/simplepredict.py usr/share/doc/python-biopython-doc/Doc/examples/opuntia.aln usr/share/doc/python-biopython-doc/Doc/examples/opuntia.fasta usr/share/doc/python-biopython-doc/Doc/examples/protein.aln usr/share/doc/python-biopython-doc/Doc/images/biopython_logo.pdf usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.pdf usr/share/doc/python-biopython-doc/Doc/images/smcra.eps usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.pdf usr/share/doc/python-biopython-doc/Doc/install/Installation.pdf usr/share/doc/python-biopython-doc/Doc/install/Installation.tex usr/share/doc/python-biopython-doc/Doc/install/Installation.txt usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa usr/share/doc/python-biopython-doc/Tests/Abi/test_data usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_1_truncated.fastq usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_2_truncated.fastq usr/share/doc/python-biopython-doc/Tests/BWA/human_g1k_v37_truncated.fasta usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-mysql.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-pg.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-sqlite.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/cor6_6.db usr/share/doc/python-biopython-doc/Tests/Blast/README.txt usr/share/doc/python-biopython-doc/Tests/Blast/mirna.tab usr/share/doc/python-biopython-doc/Tests/Blast/mirna.xml usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_011.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_006.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_007.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_006.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_007.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2012L_psiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_psiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2202L_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2216L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2221L_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2222L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2222_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2230_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.bgz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_rpsblast_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_006.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_004.xml usr/share/doc/python-biopython-doc/Tests/CDAO/test.cdao usr/share/doc/python-biopython-doc/Tests/Clustalw/hedgehog.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/promals3d.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/protein.aln usr/share/doc/python-biopython-doc/Tests/Cluster/cyano.txt usr/share/doc/python-biopython-doc/Tests/CodonUsage/HighlyExpressedGenes.txt usr/share/doc/python-biopython-doc/Tests/EMBL/AAA03323.embl usr/share/doc/python-biopython-doc/Tests/EMBL/AE017046.embl usr/share/doc/python-biopython-doc/Tests/EMBL/Human_contigs.embl usr/share/doc/python-biopython-doc/Tests/EMBL/SC10H5.embl usr/share/doc/python-biopython-doc/Tests/EMBL/TRBG361.embl usr/share/doc/python-biopython-doc/Tests/EMBL/U87107.embl usr/share/doc/python-biopython-doc/Tests/EMBL/epo_prt_selection.embl usr/share/doc/python-biopython-doc/Tests/EMBL/hla_3260_sample.imgt usr/share/doc/python-biopython-doc/Tests/EMBL/kipo_prt_sample.embl usr/share/doc/python-biopython-doc/Tests/Emboss/NirK.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/NirK_full.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/emboss_pair_aln_full_blank_line.txt usr/share/doc/python-biopython-doc/Tests/Emboss/needle.txt usr/share/doc/python-biopython-doc/Tests/Emboss/needle_asis.txt usr/share/doc/python-biopython-doc/Tests/Emboss/no_oligo.primer3 usr/share/doc/python-biopython-doc/Tests/Entrez/egquery1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/egquery2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink7.xml usr/share/doc/python-biopython-doc/Tests/Entrez/journals.xml usr/share/doc/python-biopython-doc/Tests/Entrez/ncbi_mim.xml usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/protein.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed5.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed6.xml usr/share/doc/python-biopython-doc/Tests/Entrez/taxonomy.xml usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_genome2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple.exn usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip/primates.phyx usr/share/doc/python-biopython-doc/Tests/FSSP/1cnv.fssp usr/share/doc/python-biopython-doc/Tests/Fasta/output001.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output002.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output003.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output007.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output008.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output009.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output011.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output012.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output013.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output016.m10 usr/share/doc/python-biopython-doc/Tests/GFF/NC_001422.gbk usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802.fna usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802lc.fna usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802x.fna usr/share/doc/python-biopython-doc/Tests/GenBank/1MRR_A.gp usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.faa usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.bgz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.ffn usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.fna usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.gb usr/share/doc/python-biopython-doc/Tests/GenBank/NP_416719.gbwithparts usr/share/doc/python-biopython-doc/Tests/GenBank/arab1.gb usr/share/doc/python-biopython-doc/Tests/GenBank/bad_loc_wrap.gb usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.bgz usr/share/doc/python-biopython-doc/Tests/GenBank/empty_accession.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/empty_feature_qualifier.gb usr/share/doc/python-biopython-doc/Tests/GenBank/empty_version.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/extra_keywords.gb usr/share/doc/python-biopython-doc/Tests/GenBank/gbvrl1_start.seq usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_locus_line_spacing.gb usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_misc_feature.gb usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_product.gb usr/share/doc/python-biopython-doc/Tests/GenBank/iro.gb usr/share/doc/python-biopython-doc/Tests/GenBank/negative_location.gb usr/share/doc/python-biopython-doc/Tests/GenBank/no_end_marker.gb usr/share/doc/python-biopython-doc/Tests/GenBank/noref.gb usr/share/doc/python-biopython-doc/Tests/GenBank/one_of.gb usr/share/doc/python-biopython-doc/Tests/GenBank/pBAD30.gb usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq2.gb usr/share/doc/python-biopython-doc/Tests/GenBank/wrong_sequence_indent.gb usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy_chp.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_dual.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_family.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_platform.txt usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_20_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_24_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_005.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_006.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_007.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_008.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_009.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_010.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_005.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_phmmer_001.out usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/TAT_mase_nuc.txt usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/VIF_mase-pro.txt usr/share/doc/python-biopython-doc/Tests/InterProScan/test_001.xml usr/share/doc/python-biopython-doc/Tests/KEGG/compound.sample usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.4letter usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.sample usr/share/doc/python-biopython-doc/Tests/KEGG/ko00010.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko00253.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko01100.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko03070.xml usr/share/doc/python-biopython-doc/Tests/KEGG/map00950.rea usr/share/doc/python-biopython-doc/Tests/MAF/corrupt.idx usr/share/doc/python-biopython-doc/Tests/MAF/humor.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.mafindex chmod a-x usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.mafindex usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.mafindex usr/share/doc/python-biopython-doc/Tests/MAF/unfinished.idx usr/share/doc/python-biopython-doc/Tests/MAF/wrong_version.idx usr/share/doc/python-biopython-doc/Tests/Mauve/simple.fa usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result2.txt usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta4.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta6.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta7.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta8.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta2.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta9.out usr/share/doc/python-biopython-doc/Tests/Motif/alignace.out usr/share/doc/python-biopython-doc/Tests/Motif/mast.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.out usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/NBRF/B_nuc.pir usr/share/doc/python-biopython-doc/Tests/NBRF/Cw_prot.pir usr/share/doc/python-biopython-doc/Tests/NBRF/clustalw.pir usr/share/doc/python-biopython-doc/Tests/NeXML/characters.xml usr/share/doc/python-biopython-doc/Tests/NeXML/timetree.xml usr/share/doc/python-biopython-doc/Tests/NeXML/treebase-record.xml usr/share/doc/python-biopython-doc/Tests/NeXML/trees.xml usr/share/doc/python-biopython-doc/Tests/Nexus/bats.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Heptascelio_no-states_10\+chars.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Oreiscelio_discrete\+continuous.nex usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/lysinYangSwanson2002.nuc usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/tree_regexp_versatility.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_long-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/gen_results.py usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.asa usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.cif usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.pdb usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.rsa usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.xyzr usr/share/doc/python-biopython-doc/Tests/PDB/1AS5.cif usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.cif usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.pdb usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.cif usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.dssp usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.pdb usr/share/doc/python-biopython-doc/Tests/PDB/2BEG_noheader.dssp usr/share/doc/python-biopython-doc/Tests/PDB/2OFG.cif usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.cif usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.pdb usr/share/doc/python-biopython-doc/Tests/PDB/3JQH.cif usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.cif usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.cif usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.cif usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.pdb usr/share/doc/python-biopython-doc/Tests/PDB/dssp_xtra_Sander.txt usr/share/doc/python-biopython-doc/Tests/PDB/lib_10_z_5.txt usr/share/doc/python-biopython-doc/Tests/Phd/phd1 usr/share/doc/python-biopython-doc/Tests/PhyloXML/apaf.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/bcl_2.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/made_up.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/o_tol_332_d_dollo.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/phyloxml_examples.xml usr/share/doc/python-biopython-doc/Tests/PopGen/big.gen usr/share/doc/python-biopython-doc/Tests/PopGen/haplo.gen usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00100.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/prosite.excerpt.doc usr/share/doc/python-biopython-doc/Tests/Prosite/ps00107.txt usr/share/doc/python-biopython-doc/Tests/Prosite/ps00432.txt usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Registry/EDD_RAT.dat usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_end.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_start.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_at_start.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_in_middle.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_no_manifest.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.qual usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual usr/share/doc/python-biopython-doc/Tests/Roche/greek.sff usr/share/doc/python-biopython-doc/Tests/Roche/invalid_greek_E3MFGYR02.sff usr/share/doc/python-biopython-doc/Tests/Roche/invalid_paired_E3MFGYR02.sff usr/share/doc/python-biopython-doc/Tests/Roche/paired.sff usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff.idx usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff_rel_paths.idx usr/share/doc/python-biopython-doc/Tests/SCOP/raftest.txt usr/share/doc/python-biopython-doc/Tests/SamBam/bam1.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam1_sorted.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam2.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam2_sorted.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.sam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.sam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_refresh.bam usr/share/doc/python-biopython-doc/Tests/SamBam/sam1.sam usr/share/doc/python-biopython-doc/Tests/SamBam/sam2.sam usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/P97881.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/R5HY77.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.gff usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.rdf usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/sp003 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp004 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp008 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp010 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp011 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp014 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp016 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni001 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni002 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni003 usr/share/doc/python-biopython-doc/Tests/UniGene/Eca.1.2425.data usr/share/doc/python-biopython-doc/Tests/UniGene/Hs.2.data usr/share/doc/python-biopython-doc/Tests/UniProt/goa_yeast.gaf usr/share/doc/python-biopython-doc/Tests/codonalign/adh.aln usr/share/doc/python-biopython-doc/Tests/codonalign/drosophilla.fasta usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_nucl.fa usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_pro.aln usr/share/doc/python-biopython-doc/Tests/codonalign/nucl2.fa usr/share/doc/python-biopython-doc/Tests/codonalign/nucl3.fa usr/share/doc/python-biopython-doc/Tests/codonalign/nucl4.fa usr/share/doc/python-biopython-doc/Tests/codonalign/pro2.aln usr/share/doc/python-biopython-doc/Tests/codonalign/pro3.aln usr/share/doc/python-biopython-doc/Tests/codonalign/pro4.aln usr/share/doc/python-biopython-doc/Tests/common_BioSQL.py usr/share/doc/python-biopython-doc/Tests/common_BioSQL_online.py usr/share/doc/python-biopython-doc/Tests/motifs/alignace.out usr/share/doc/python-biopython-doc/Tests/motifs/mast.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.out usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.rna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme_v_4_11_4.txt usr/share/doc/python-biopython-doc/Tests/output/test_AlignIO usr/share/doc/python-biopython-doc/Tests/output/test_Clustalw usr/share/doc/python-biopython-doc/Tests/output/test_GenBank usr/share/doc/python-biopython-doc/Tests/output/test_PDB usr/share/doc/python-biopython-doc/Tests/output/test_SeqIO usr/share/doc/python-biopython-doc/Tests/output/test_SubsMat usr/share/doc/python-biopython-doc/Tests/output/test_align usr/share/doc/python-biopython-doc/Tests/output/test_geo usr/share/doc/python-biopython-doc/Tests/phenotype/BadPlate.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plate.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plate_2.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plates.csv usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate.json usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate_2.json usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlates.csv usr/share/doc/python-biopython-doc/Tests/run_tests.py usr/share/doc/python-biopython-doc/Tests/search_tests_common.py usr/share/doc/python-biopython-doc/Tests/seq_tests_common.py usr/share/doc/python-biopython-doc/Tests/test_Ace.py usr/share/doc/python-biopython-doc/Tests/test_Affy.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_ClustalIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_EmbossIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_FastaIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_MauveIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_PhylipIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignInfo.py usr/share/doc/python-biopython-doc/Tests/test_Application.py usr/share/doc/python-biopython-doc/Tests/test_BWA_tool.py usr/share/doc/python-biopython-doc/Tests/test_CelFile.py usr/share/doc/python-biopython-doc/Tests/test_ClustalOmega_tool.py usr/share/doc/python-biopython-doc/Tests/test_Clustalw_tool.py usr/share/doc/python-biopython-doc/Tests/test_Cluster.py usr/share/doc/python-biopython-doc/Tests/test_CodonTable.py usr/share/doc/python-biopython-doc/Tests/test_ColorSpiral.py usr/share/doc/python-biopython-doc/Tests/test_Consensus.py usr/share/doc/python-biopython-doc/Tests/test_Crystal.py usr/share/doc/python-biopython-doc/Tests/test_Dialign_tool.py usr/share/doc/python-biopython-doc/Tests/test_Emboss.py usr/share/doc/python-biopython-doc/Tests/test_EmbossPrimer.py usr/share/doc/python-biopython-doc/Tests/test_Entrez.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_online.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_parser.py usr/share/doc/python-biopython-doc/Tests/test_Enzyme.py usr/share/doc/python-biopython-doc/Tests/test_Fasttree_tool.py usr/share/doc/python-biopython-doc/Tests/test_File.py usr/share/doc/python-biopython-doc/Tests/test_GenBank.py usr/share/doc/python-biopython-doc/Tests/test_GenBank_unittest.py usr/share/doc/python-biopython-doc/Tests/test_GenomeDiagram.py usr/share/doc/python-biopython-doc/Tests/test_GraphicsChromosome.py usr/share/doc/python-biopython-doc/Tests/test_HMMCasino.py usr/share/doc/python-biopython-doc/Tests/test_HMMGeneral.py usr/share/doc/python-biopython-doc/Tests/test_KDTree.py usr/share/doc/python-biopython-doc/Tests/test_KEGG.py usr/share/doc/python-biopython-doc/Tests/test_KEGG_online.py usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics.py usr/share/doc/python-biopython-doc/Tests/test_KGML_nographics.py usr/share/doc/python-biopython-doc/Tests/test_KeyWList.py chmod a-x usr/share/doc/python-biopython-doc/Tests/test_LogisticRegression.py usr/share/doc/python-biopython-doc/Tests/test_MafIO_index.py usr/share/doc/python-biopython-doc/Tests/test_Mafft_tool.py usr/share/doc/python-biopython-doc/Tests/test_MarkovModel.py usr/share/doc/python-biopython-doc/Tests/test_Medline.py usr/share/doc/python-biopython-doc/Tests/test_Muscle_tool.py usr/share/doc/python-biopython-doc/Tests/test_NCBITextParser.py usr/share/doc/python-biopython-doc/Tests/test_NCBIXML.py usr/share/doc/python-biopython-doc/Tests/test_NCBI_BLAST_tools.py usr/share/doc/python-biopython-doc/Tests/test_NCBI_qblast.py usr/share/doc/python-biopython-doc/Tests/test_NaiveBayes.py usr/share/doc/python-biopython-doc/Tests/test_Nexus.py usr/share/doc/python-biopython-doc/Tests/test_PAML_baseml.py usr/share/doc/python-biopython-doc/Tests/test_PAML_codeml.py usr/share/doc/python-biopython-doc/Tests/test_PAML_yn00.py usr/share/doc/python-biopython-doc/Tests/test_PDB.py usr/share/doc/python-biopython-doc/Tests/test_PDBList.py usr/share/doc/python-biopython-doc/Tests/test_PDB_KDTree.py usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIF2Dict.py usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIFParser.py usr/share/doc/python-biopython-doc/Tests/test_PDB_Superimposer.py usr/share/doc/python-biopython-doc/Tests/test_Pathway.py usr/share/doc/python-biopython-doc/Tests/test_Phd.py usr/share/doc/python-biopython-doc/Tests/test_Phylo.py usr/share/doc/python-biopython-doc/Tests/test_PhyloXML.py usr/share/doc/python-biopython-doc/Tests/test_PopGen_GenePop_nodepend.py usr/share/doc/python-biopython-doc/Tests/test_Prank_tool.py usr/share/doc/python-biopython-doc/Tests/test_ProtParam.py usr/share/doc/python-biopython-doc/Tests/test_QCPSuperimposer.py usr/share/doc/python-biopython-doc/Tests/test_Restriction.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Raf.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Scop.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_legacy.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_model.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_write.py usr/share/doc/python-biopython-doc/Tests/test_SeqFeature.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_AbiIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_FastaIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_PdbIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_QualityIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SeqXML.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_convert.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_features.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_index.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_write.py usr/share/doc/python-biopython-doc/Tests/test_SeqRecord.py usr/share/doc/python-biopython-doc/Tests/test_SeqUtils.py usr/share/doc/python-biopython-doc/Tests/test_Seq_objs.py usr/share/doc/python-biopython-doc/Tests/test_SffIO.py usr/share/doc/python-biopython-doc/Tests/test_SwissProt.py usr/share/doc/python-biopython-doc/Tests/test_TCoffee_tool.py usr/share/doc/python-biopython-doc/Tests/test_TogoWS.py usr/share/doc/python-biopython-doc/Tests/test_TreeConstruction.py usr/share/doc/python-biopython-doc/Tests/test_Tutorial.py usr/share/doc/python-biopython-doc/Tests/test_UniGene.py usr/share/doc/python-biopython-doc/Tests/test_Uniprot.py usr/share/doc/python-biopython-doc/Tests/test_align.py usr/share/doc/python-biopython-doc/Tests/test_bgzf.py usr/share/doc/python-biopython-doc/Tests/test_cellosaurus.py usr/share/doc/python-biopython-doc/Tests/test_codonalign.py usr/share/doc/python-biopython-doc/Tests/test_mmtf.py usr/share/doc/python-biopython-doc/Tests/test_motifs.py usr/share/doc/python-biopython-doc/Tests/test_pairwise2.py usr/share/doc/python-biopython-doc/Tests/test_pairwise_aligner.py usr/share/doc/python-biopython-doc/Tests/test_phenotype.py usr/share/doc/python-biopython-doc/Tests/test_prodoc.py usr/share/doc/python-biopython-doc/Tests/test_prosite1.py usr/share/doc/python-biopython-doc/Tests/test_prosite2.py usr/share/doc/python-biopython-doc/Tests/test_psw.py usr/share/doc/python-biopython-doc/Tests/test_samtools_tool.py usr/share/doc/python-biopython-doc/Tests/test_seq.py usr/share/doc/python-biopython-doc/Tests/test_trie.py usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10.maf usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex usr/share/doc/python-biopython-doc/Tests_avoid/test_EmbossPhylipNew.py usr/share/doc/python-biopython-doc/Tests_avoid/test_MSAProbs_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop_EasyController.py usr/share/doc/python-biopython-doc/Tests_avoid/test_XXmotif_tool.py usr/share/doc/python-biopython-doc/changelog.Debian gzip -9nf usr/share/doc/python-biopython-doc/Doc/Tutorial.pdf usr/share/doc/python-biopython-doc/Doc/Tutorial.tex usr/share/doc/python-biopython-doc/Doc/Tutorial.txt usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_advanced.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_align.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_blast.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cluster.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_contributing.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cookbook.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_entrez.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_graphics.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_introduction.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_kegg.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_learning.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_motifs.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_pdb.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phenotype.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phylo.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_popgen.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_quick_start.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_searchio.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_annot.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_objects.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seqio.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_testing.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_uniprot.tex usr/share/doc/python-biopython-doc/Doc/api/conf.py usr/share/doc/python-biopython-doc/Doc/biopdb_faq.pdf usr/share/doc/python-biopython-doc/Doc/biopdb_faq.tex usr/share/doc/python-biopython-doc/Doc/cookbook/Restriction/Restriction.md usr/share/doc/python-biopython-doc/Doc/doc.rst usr/share/doc/python-biopython-doc/Doc/doc.tex usr/share/doc/python-biopython-doc/Doc/examples/ACT_example.py usr/share/doc/python-biopython-doc/Doc/examples/Plates.csv usr/share/doc/python-biopython-doc/Doc/examples/Proux_et_al_2002_Figure_6.py usr/share/doc/python-biopython-doc/Doc/examples/ec_5.4.2.2.txt usr/share/doc/python-biopython-doc/Doc/examples/getgene.py usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.fasta usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.bgz usr/share/doc/python-biopython-doc/Doc/examples/my_blast.xml usr/share/doc/python-biopython-doc/Doc/examples/nmr/simplepredict.py usr/share/doc/python-biopython-doc/Doc/examples/opuntia.aln usr/share/doc/python-biopython-doc/Doc/examples/opuntia.fasta usr/share/doc/python-biopython-doc/Doc/examples/protein.aln usr/share/doc/python-biopython-doc/Doc/images/biopython_logo.pdf usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.pdf usr/share/doc/python-biopython-doc/Doc/images/smcra.eps usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.pdf usr/share/doc/python-biopython-doc/Doc/install/Installation.pdf usr/share/doc/python-biopython-doc/Doc/install/Installation.tex usr/share/doc/python-biopython-doc/Doc/install/Installation.txt usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa usr/share/doc/python-biopython-doc/Tests/Abi/test_data usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_1_truncated.fastq usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_2_truncated.fastq usr/share/doc/python-biopython-doc/Tests/BWA/human_g1k_v37_truncated.fasta usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-mysql.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-pg.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-sqlite.sql usr/share/doc/python-biopython-doc/Tests/BioSQL/cor6_6.db usr/share/doc/python-biopython-doc/Tests/Blast/README.txt usr/share/doc/python-biopython-doc/Tests/Blast/mirna.tab usr/share/doc/python-biopython-doc/Tests/Blast/mirna.xml usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_011.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_006.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_007.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_006.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_007.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2012L_psiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_blastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_psiblast_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2202L_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2216L_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2221L_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2222L_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2222_blastx_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/text_2230_blastp_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.bgz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_rpsblast_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_006.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_004.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_005.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_003.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_004.xml usr/share/doc/python-biopython-doc/Tests/CDAO/test.cdao usr/share/doc/python-biopython-doc/Tests/Clustalw/hedgehog.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/promals3d.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/protein.aln usr/share/doc/python-biopython-doc/Tests/Cluster/cyano.txt usr/share/doc/python-biopython-doc/Tests/CodonUsage/HighlyExpressedGenes.txt usr/share/doc/python-biopython-doc/Tests/EMBL/AAA03323.embl usr/share/doc/python-biopython-doc/Tests/EMBL/AE017046.embl usr/share/doc/python-biopython-doc/Tests/EMBL/Human_contigs.embl usr/share/doc/python-biopython-doc/Tests/EMBL/SC10H5.embl usr/share/doc/python-biopython-doc/Tests/EMBL/TRBG361.embl usr/share/doc/python-biopython-doc/Tests/EMBL/U87107.embl usr/share/doc/python-biopython-doc/Tests/EMBL/epo_prt_selection.embl usr/share/doc/python-biopython-doc/Tests/EMBL/hla_3260_sample.imgt usr/share/doc/python-biopython-doc/Tests/EMBL/kipo_prt_sample.embl usr/share/doc/python-biopython-doc/Tests/Emboss/NirK.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/NirK_full.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/emboss_pair_aln_full_blank_line.txt usr/share/doc/python-biopython-doc/Tests/Emboss/needle.txt usr/share/doc/python-biopython-doc/Tests/Emboss/needle_asis.txt usr/share/doc/python-biopython-doc/Tests/Emboss/no_oligo.primer3 usr/share/doc/python-biopython-doc/Tests/Entrez/egquery1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/egquery2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink7.xml usr/share/doc/python-biopython-doc/Tests/Entrez/journals.xml usr/share/doc/python-biopython-doc/Tests/Entrez/ncbi_mim.xml usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/protein.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed5.xml usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed6.xml usr/share/doc/python-biopython-doc/Tests/Entrez/taxonomy.xml usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_genome2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple.exn usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip/primates.phyx usr/share/doc/python-biopython-doc/Tests/FSSP/1cnv.fssp usr/share/doc/python-biopython-doc/Tests/Fasta/output001.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output002.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output003.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output007.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output008.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output009.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output011.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output012.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output013.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output016.m10 usr/share/doc/python-biopython-doc/Tests/GFF/NC_001422.gbk usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802.fna usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802lc.fna usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802x.fna usr/share/doc/python-biopython-doc/Tests/GenBank/1MRR_A.gp usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485_output.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.faa usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.bgz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.ffn usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.fna usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.gb usr/share/doc/python-biopython-doc/Tests/GenBank/NP_416719.gbwithparts usr/share/doc/python-biopython-doc/Tests/GenBank/arab1.gb usr/share/doc/python-biopython-doc/Tests/GenBank/bad_loc_wrap.gb usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.bgz usr/share/doc/python-biopython-doc/Tests/GenBank/empty_accession.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/empty_feature_qualifier.gb usr/share/doc/python-biopython-doc/Tests/GenBank/empty_version.gbk usr/share/doc/python-biopython-doc/Tests/GenBank/extra_keywords.gb usr/share/doc/python-biopython-doc/Tests/GenBank/gbvrl1_start.seq usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_locus_line_spacing.gb usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_misc_feature.gb usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_product.gb usr/share/doc/python-biopython-doc/Tests/GenBank/iro.gb usr/share/doc/python-biopython-doc/Tests/GenBank/negative_location.gb usr/share/doc/python-biopython-doc/Tests/GenBank/no_end_marker.gb usr/share/doc/python-biopython-doc/Tests/GenBank/noref.gb usr/share/doc/python-biopython-doc/Tests/GenBank/one_of.gb usr/share/doc/python-biopython-doc/Tests/GenBank/pBAD30.gb usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq2.gb usr/share/doc/python-biopython-doc/Tests/GenBank/wrong_sequence_indent.gb usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy_chp.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_dual.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_family.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_platform.txt usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_20_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_24_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_005.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_006.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_007.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_008.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_009.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_010.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_005.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_phmmer_001.out usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/TAT_mase_nuc.txt usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/VIF_mase-pro.txt usr/share/doc/python-biopython-doc/Tests/InterProScan/test_001.xml usr/share/doc/python-biopython-doc/Tests/KEGG/compound.sample usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.4letter usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.sample usr/share/doc/python-biopython-doc/Tests/KEGG/ko00010.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko00253.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko01100.xml usr/share/doc/python-biopython-doc/Tests/KEGG/ko03070.xml usr/share/doc/python-biopython-doc/Tests/KEGG/map00950.rea usr/share/doc/python-biopython-doc/Tests/MAF/corrupt.idx usr/share/doc/python-biopython-doc/Tests/MAF/humor.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.mafindex gzip -9nf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.mafindex usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.mafindex usr/share/doc/python-biopython-doc/Tests/MAF/unfinished.idx usr/share/doc/python-biopython-doc/Tests/MAF/wrong_version.idx usr/share/doc/python-biopython-doc/Tests/Mauve/simple.fa usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result2.txt usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta4.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta6.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta7.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta8.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta2.out usr/share/doc/python-biopython-doc/Tests/MetaTool/meta9.out usr/share/doc/python-biopython-doc/Tests/Motif/alignace.out usr/share/doc/python-biopython-doc/Tests/Motif/mast.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.out usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/NBRF/B_nuc.pir usr/share/doc/python-biopython-doc/Tests/NBRF/Cw_prot.pir usr/share/doc/python-biopython-doc/Tests/NBRF/clustalw.pir usr/share/doc/python-biopython-doc/Tests/NeXML/characters.xml usr/share/doc/python-biopython-doc/Tests/NeXML/timetree.xml usr/share/doc/python-biopython-doc/Tests/NeXML/treebase-record.xml usr/share/doc/python-biopython-doc/Tests/NeXML/trees.xml usr/share/doc/python-biopython-doc/Tests/Nexus/bats.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Heptascelio_no-states_10\+chars.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Oreiscelio_discrete\+continuous.nex usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/lysinYangSwanson2002.nuc usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/tree_regexp_versatility.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_long-4_8.out usr/share/doc/python-biopython-doc/Tests/PAML/gen_results.py usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.asa usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.cif usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.pdb usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.rsa usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.xyzr usr/share/doc/python-biopython-doc/Tests/PDB/1AS5.cif usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.cif usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.pdb usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.cif usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.dssp usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.pdb usr/share/doc/python-biopython-doc/Tests/PDB/2BEG_noheader.dssp usr/share/doc/python-biopython-doc/Tests/PDB/2OFG.cif usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.cif usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.pdb usr/share/doc/python-biopython-doc/Tests/PDB/3JQH.cif usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.cif usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.cif usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.mmtf usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.cif usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.pdb usr/share/doc/python-biopython-doc/Tests/PDB/dssp_xtra_Sander.txt usr/share/doc/python-biopython-doc/Tests/PDB/lib_10_z_5.txt usr/share/doc/python-biopython-doc/Tests/Phd/phd1 usr/share/doc/python-biopython-doc/Tests/PhyloXML/apaf.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/bcl_2.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/made_up.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/o_tol_332_d_dollo.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/phyloxml_examples.xml usr/share/doc/python-biopython-doc/Tests/PopGen/big.gen usr/share/doc/python-biopython-doc/Tests/PopGen/haplo.gen usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00100.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/prosite.excerpt.doc usr/share/doc/python-biopython-doc/Tests/Prosite/ps00107.txt usr/share/doc/python-biopython-doc/Tests/Prosite/ps00432.txt usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Registry/EDD_RAT.dat usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_end.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_start.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_at_start.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_in_middle.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_no_manifest.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.qual usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual usr/share/doc/python-biopython-doc/Tests/Roche/greek.sff usr/share/doc/python-biopython-doc/Tests/Roche/invalid_greek_E3MFGYR02.sff usr/share/doc/python-biopython-doc/Tests/Roche/invalid_paired_E3MFGYR02.sff usr/share/doc/python-biopython-doc/Tests/Roche/paired.sff usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff.idx usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff_rel_paths.idx usr/share/doc/python-biopython-doc/Tests/SCOP/raftest.txt usr/share/doc/python-biopython-doc/Tests/SamBam/bam1.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam1_sorted.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam2.bam usr/share/doc/python-biopython-doc/Tests/SamBam/bam2_sorted.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.sam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.bam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.sam usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_refresh.bam usr/share/doc/python-biopython-doc/Tests/SamBam/sam1.sam usr/share/doc/python-biopython-doc/Tests/SamBam/sam2.sam usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/P97881.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/R5HY77.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.gff usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.rdf usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/sp003 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp004 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp008 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp010 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp011 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp014 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp016 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni001 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni002 usr/share/doc/python-biopython-doc/Tests/SwissProt/uni003 usr/share/doc/python-biopython-doc/Tests/UniGene/Eca.1.2425.data usr/share/doc/python-biopython-doc/Tests/UniGene/Hs.2.data usr/share/doc/python-biopython-doc/Tests/UniProt/goa_yeast.gaf usr/share/doc/python-biopython-doc/Tests/codonalign/adh.aln usr/share/doc/python-biopython-doc/Tests/codonalign/drosophilla.fasta usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_nucl.fa usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_pro.aln usr/share/doc/python-biopython-doc/Tests/codonalign/nucl2.fa usr/share/doc/python-biopython-doc/Tests/codonalign/nucl3.fa usr/share/doc/python-biopython-doc/Tests/codonalign/nucl4.fa usr/share/doc/python-biopython-doc/Tests/codonalign/pro2.aln usr/share/doc/python-biopython-doc/Tests/codonalign/pro3.aln usr/share/doc/python-biopython-doc/Tests/codonalign/pro4.aln usr/share/doc/python-biopython-doc/Tests/common_BioSQL.py usr/share/doc/python-biopython-doc/Tests/common_BioSQL_online.py usr/share/doc/python-biopython-doc/Tests/motifs/alignace.out usr/share/doc/python-biopython-doc/Tests/motifs/mast.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.dna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.out usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.tcm.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme.rna.oops.txt usr/share/doc/python-biopython-doc/Tests/motifs/meme_v_4_11_4.txt usr/share/doc/python-biopython-doc/Tests/output/test_AlignIO usr/share/doc/python-biopython-doc/Tests/output/test_Clustalw usr/share/doc/python-biopython-doc/Tests/output/test_GenBank usr/share/doc/python-biopython-doc/Tests/output/test_PDB usr/share/doc/python-biopython-doc/Tests/output/test_SeqIO usr/share/doc/python-biopython-doc/Tests/output/test_SubsMat usr/share/doc/python-biopython-doc/Tests/output/test_align usr/share/doc/python-biopython-doc/Tests/output/test_geo usr/share/doc/python-biopython-doc/Tests/phenotype/BadPlate.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plate.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plate_2.json usr/share/doc/python-biopython-doc/Tests/phenotype/Plates.csv usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate.json usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate_2.json usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlates.csv usr/share/doc/python-biopython-doc/Tests/run_tests.py usr/share/doc/python-biopython-doc/Tests/search_tests_common.py usr/share/doc/python-biopython-doc/Tests/seq_tests_common.py usr/share/doc/python-biopython-doc/Tests/test_Ace.py usr/share/doc/python-biopython-doc/Tests/test_Affy.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_ClustalIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_EmbossIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_FastaIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_MauveIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_PhylipIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignInfo.py usr/share/doc/python-biopython-doc/Tests/test_Application.py usr/share/doc/python-biopython-doc/Tests/test_BWA_tool.py usr/share/doc/python-biopython-doc/Tests/test_CelFile.py usr/share/doc/python-biopython-doc/Tests/test_ClustalOmega_tool.py usr/share/doc/python-biopython-doc/Tests/test_Clustalw_tool.py usr/share/doc/python-biopython-doc/Tests/test_Cluster.py usr/share/doc/python-biopython-doc/Tests/test_CodonTable.py usr/share/doc/python-biopython-doc/Tests/test_ColorSpiral.py usr/share/doc/python-biopython-doc/Tests/test_Consensus.py usr/share/doc/python-biopython-doc/Tests/test_Crystal.py usr/share/doc/python-biopython-doc/Tests/test_Dialign_tool.py usr/share/doc/python-biopython-doc/Tests/test_Emboss.py usr/share/doc/python-biopython-doc/Tests/test_EmbossPrimer.py usr/share/doc/python-biopython-doc/Tests/test_Entrez.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_online.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_parser.py usr/share/doc/python-biopython-doc/Tests/test_Enzyme.py usr/share/doc/python-biopython-doc/Tests/test_Fasttree_tool.py usr/share/doc/python-biopython-doc/Tests/test_File.py usr/share/doc/python-biopython-doc/Tests/test_GenBank.py usr/share/doc/python-biopython-doc/Tests/test_GenBank_unittest.py usr/share/doc/python-biopython-doc/Tests/test_GenomeDiagram.py usr/share/doc/python-biopython-doc/Tests/test_GraphicsChromosome.py usr/share/doc/python-biopython-doc/Tests/test_HMMCasino.py usr/share/doc/python-biopython-doc/Tests/test_HMMGeneral.py usr/share/doc/python-biopython-doc/Tests/test_KDTree.py usr/share/doc/python-biopython-doc/Tests/test_KEGG.py usr/share/doc/python-biopython-doc/Tests/test_KEGG_online.py usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics.py usr/share/doc/python-biopython-doc/Tests/test_KGML_nographics.py usr/share/doc/python-biopython-doc/Tests/test_KeyWList.py gzip -9nf usr/share/doc/python-biopython-doc/Tests/test_LogisticRegression.py usr/share/doc/python-biopython-doc/Tests/test_MafIO_index.py usr/share/doc/python-biopython-doc/Tests/test_Mafft_tool.py usr/share/doc/python-biopython-doc/Tests/test_MarkovModel.py usr/share/doc/python-biopython-doc/Tests/test_Medline.py usr/share/doc/python-biopython-doc/Tests/test_Muscle_tool.py usr/share/doc/python-biopython-doc/Tests/test_NCBITextParser.py usr/share/doc/python-biopython-doc/Tests/test_NCBIXML.py usr/share/doc/python-biopython-doc/Tests/test_NCBI_BLAST_tools.py usr/share/doc/python-biopython-doc/Tests/test_NCBI_qblast.py usr/share/doc/python-biopython-doc/Tests/test_NaiveBayes.py usr/share/doc/python-biopython-doc/Tests/test_Nexus.py usr/share/doc/python-biopython-doc/Tests/test_PAML_baseml.py usr/share/doc/python-biopython-doc/Tests/test_PAML_codeml.py usr/share/doc/python-biopython-doc/Tests/test_PAML_yn00.py usr/share/doc/python-biopython-doc/Tests/test_PDB.py usr/share/doc/python-biopython-doc/Tests/test_PDBList.py usr/share/doc/python-biopython-doc/Tests/test_PDB_KDTree.py usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIF2Dict.py usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIFParser.py usr/share/doc/python-biopython-doc/Tests/test_PDB_Superimposer.py usr/share/doc/python-biopython-doc/Tests/test_Pathway.py usr/share/doc/python-biopython-doc/Tests/test_Phd.py usr/share/doc/python-biopython-doc/Tests/test_Phylo.py usr/share/doc/python-biopython-doc/Tests/test_PhyloXML.py usr/share/doc/python-biopython-doc/Tests/test_PopGen_GenePop_nodepend.py usr/share/doc/python-biopython-doc/Tests/test_Prank_tool.py usr/share/doc/python-biopython-doc/Tests/test_ProtParam.py usr/share/doc/python-biopython-doc/Tests/test_QCPSuperimposer.py usr/share/doc/python-biopython-doc/Tests/test_Restriction.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Raf.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Scop.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_legacy.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_model.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_write.py usr/share/doc/python-biopython-doc/Tests/test_SeqFeature.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_AbiIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_FastaIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_PdbIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_QualityIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SeqXML.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_convert.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_features.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_index.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_write.py usr/share/doc/python-biopython-doc/Tests/test_SeqRecord.py usr/share/doc/python-biopython-doc/Tests/test_SeqUtils.py usr/share/doc/python-biopython-doc/Tests/test_Seq_objs.py usr/share/doc/python-biopython-doc/Tests/test_SffIO.py usr/share/doc/python-biopython-doc/Tests/test_SwissProt.py usr/share/doc/python-biopython-doc/Tests/test_TCoffee_tool.py usr/share/doc/python-biopython-doc/Tests/test_TogoWS.py usr/share/doc/python-biopython-doc/Tests/test_TreeConstruction.py usr/share/doc/python-biopython-doc/Tests/test_Tutorial.py usr/share/doc/python-biopython-doc/Tests/test_UniGene.py usr/share/doc/python-biopython-doc/Tests/test_Uniprot.py usr/share/doc/python-biopython-doc/Tests/test_align.py usr/share/doc/python-biopython-doc/Tests/test_bgzf.py usr/share/doc/python-biopython-doc/Tests/test_cellosaurus.py usr/share/doc/python-biopython-doc/Tests/test_codonalign.py usr/share/doc/python-biopython-doc/Tests/test_mmtf.py usr/share/doc/python-biopython-doc/Tests/test_motifs.py usr/share/doc/python-biopython-doc/Tests/test_pairwise2.py usr/share/doc/python-biopython-doc/Tests/test_pairwise_aligner.py usr/share/doc/python-biopython-doc/Tests/test_phenotype.py usr/share/doc/python-biopython-doc/Tests/test_prodoc.py usr/share/doc/python-biopython-doc/Tests/test_prosite1.py usr/share/doc/python-biopython-doc/Tests/test_prosite2.py usr/share/doc/python-biopython-doc/Tests/test_psw.py usr/share/doc/python-biopython-doc/Tests/test_samtools_tool.py usr/share/doc/python-biopython-doc/Tests/test_seq.py usr/share/doc/python-biopython-doc/Tests/test_trie.py usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10.maf usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex usr/share/doc/python-biopython-doc/Tests_avoid/test_EmbossPhylipNew.py usr/share/doc/python-biopython-doc/Tests_avoid/test_MSAProbs_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop_EasyController.py usr/share/doc/python-biopython-doc/Tests_avoid/test_XXmotif_tool.py usr/share/doc/python-biopython-doc/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' cd debian/python-biopython-sql chmod a-x usr/share/doc/python-biopython-sql/changelog.Debian gzip -9nf usr/share/doc/python-biopython-sql/changelog.Debian cd '/<>/python-biopython-1.73+dfsg' rm -f debian/python-biopython-doc.debhelper.log debian/python-biopython-sql.debhelper.log debian/python3-biopython-sql.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/<>/python-biopython-1.73+dfsg' dh_fixperms find debian/python-biopython -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biopython-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biopython-sql -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-biopython -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biopython-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biopython-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-sql -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian -name "*.dtd" -exec chmod -x \{\} \; chmod: cannot operate on dangling symlink 'debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd' chmod: cannot operate on dangling symlink 'debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd' make[1]: Leaving directory '/<>/python-biopython-1.73+dfsg' dh_missing -O--buildsystem=pybuild dh_missing: usr/lib/python3.7/dist-packages/Tests/test_pairwise_aligner.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Muscle_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/common_BioSQL_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Cla.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_Superimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_SeqXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Entrez_parser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_TogoWS.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_align.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_vectors.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_MarkovModel.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_lowess.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo_CDAO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_FSSP.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Mafft_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo_networkx.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Pathway.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/search_tests_common.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_features.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output.best.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/requires_internet.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Residues.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_ClustalOmega_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Application.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Ace.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_FastaIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/run_tests.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GenBank.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Probcons_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_tab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Medline.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SwissProt.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_File.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Prank_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_mmtf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_QCPSuperimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SubsMat.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Location.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Enzyme.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_CAPS.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Cluster.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/.coveragerc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PAML_baseml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_UniGene.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqFeature.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Entrez.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Hie.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Tutorial.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDBList.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_samtools_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_EmbossPrimer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_convert.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Scop.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phd.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PhyloXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GraphicsGeneral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_MafIO_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_TCoffee_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Fasttree_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_phenotype.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_ClustalIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Raf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_codonalign.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_Insdc.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_mmtf_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_prosite2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_MauveIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignInfo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_PhylipIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Nexus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_legacy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Crystal.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_Polypetide.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/biosql.ini.appveyor exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Dialign_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_ResidueDepth.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/.flake8 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_phenotype_fit.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_CodonUsage.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SffIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_raxml_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_FastaIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GraphicsBitmaps.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/requires_wise.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KGML_graphics_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo_matplotlib.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BWA_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_geo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_NCBIXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_trie.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_mysql_connector.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Compass.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KDTree.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_StructureAlignment.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Chi2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_RCSBFormats.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_NCBITextParser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_MMCIFParser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Des.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_NCBI_qblast.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_KDTree.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_fasta_m10.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Astral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_psw.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output.best.fas exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_seq.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GraphicsDistribution.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/common_BioSQL.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Clustalw_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_pairwise2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqUtils.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_DSSP_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KGML_nographics.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_QualityIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_prosite1.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_exonerate.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SCOP_Dom.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Emboss.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KEGG.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GenBank_unittest.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PAML_codeml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_kNN.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_cellosaurus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/seq_tests_common.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KeyWList.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Seq_objs.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_LogisticRegression.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PDB_FragmentMapper.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_write.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_ProtParam.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Affy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Uniprot.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_TreeConstruction.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_write.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_blat_psl.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Wise.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_ExPASy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_HMMCasino.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SearchIO_model.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_prodoc.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Consensus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_convert.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_NaiveBayes.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_bgzf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_EMBL_unittest.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_motifs_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_motifs.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_CelFile.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_NCBI_BLAST_tools.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Restriction.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Phylo_NeXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_ColorSpiral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_AbiIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_translate.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SVDSuperimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GenomeDiagram.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_Entrez_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_PAML_yn00.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_GraphicsChromosome.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/biosql.ini.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_KEGG_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_HMMGeneral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_CodonTable.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqRecord.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_AlignIO_EmbossIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO_PdbIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/test_SeqIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_35_002.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_34_001.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_34_002.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_34_005.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/mirna.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_34_003.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_34_001.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_34_003.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_34_002.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_34_004.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_34_004.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_35_002.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/pslx_34_005.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blat/psl_35_001.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/compound.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/map03070.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/enzyme.4letter exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/compound.irregular exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/map00950.rea exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/enzyme.irregular exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/enzyme.new exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/map01100.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/ko00010.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/ko01100.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/enzyme.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/ko03070.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/gene.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/KEGG/ko00253.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Enzymes/valine.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Enzymes/lipoprotein.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Enzymes/proline.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Enzymes/lactate.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/test.fsa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/no_smpl1.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/3100.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/fake.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/A6_1-DB3.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/3730.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/empty.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/310.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Abi/test_data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Compass/comtest1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Compass/comtest2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp004 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp014 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp016 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/P84001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/keywlist2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/F2CXE6.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/R5HY77.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/uni003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp012 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/H2CNN8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp009 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp005 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp010 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.gff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp007 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp006 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/Q13639.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/uni001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp011 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp008 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp015 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.list exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/P97881.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.rdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/uni002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/sp013 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/multi_ex.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/keywlist.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/Q13639.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/F2CXE6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SwissProt/H2CNN8.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_platform.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/GSM645.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/GSM804.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_dual.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/GSM700.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_family.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_series.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/GSE16.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_affy_chp.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/soft_ex_affy.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Geo/GSM691.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/gen_results.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/bad_results.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/tree_regexp_versatility.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/baseml_alpha1rho1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/baseml_SE.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml43.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml44c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml41.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml44.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00_long-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Alignments/alignment.phylip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Alignments/aa_alignment.phylip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Alignments/lysinYangSwanson2002.nuc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Alignments/longnames.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Trees/lysin.trees exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Trees/lysin.trees.4.6 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Trees/bad.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Trees/species.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/bad3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/bad2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/bad1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/species.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/freeratio.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/SE.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/NSsite3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/aa_model0.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/aa_pairwise.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/codeml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/branchsiteA.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/m2a_rel.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/pairwise.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/all_NSsites.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/codeml/clademodelC.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model8.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nparK2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/SE.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nparK3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nparK1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model5.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/baseml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model0.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/alpha1rho1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model6.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nparK4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model7.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/model2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00/yn00_long.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PAML/Control_files/yn00/yn00.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Cellosaurus/cell_lines_3.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Cellosaurus/cell_lines_1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Cellosaurus/cell_lines_2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/dir.cla.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/testDom.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/raftest.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/dir.des.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/dir.hie.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/FSSP/1cnv.fssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Saf/saf1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/protein.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/cw02.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/opuntia.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/promals3d.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/odd_consensus.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/temp horses.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Clustalw/hedgehog.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BioSQL/cor6_6.db exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BioSQL/biosqldb-sqlite.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BioSQL/biosqldb-mysql.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BioSQL/biosqldb-pg.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Medline/pubmed_result2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Medline/pubmed_result3.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Medline/pubmed_result1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/CDAO/test.cdao exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00107.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00165.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00159.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00432.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00546.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/ps00488.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00640.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00100.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00424.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00113.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00933.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00144.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/prosite.excerpt.doc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00472.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00340.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00787.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Prosite/Doc/pdoc00149.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_010.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b2_hmmsearch_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_009.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b2_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_008.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_007.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_20_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_22_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_005.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_005.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b2_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/domtab_30_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_22_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_21_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_24_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_30_hmmscan_006.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b2_phmmer_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Hmmer/text_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/CodonUsage/HighlyExpressedGenes.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/InterProScan/test_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/phyloxml_examples.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/made_up.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/apaf.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/bcl_2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/o_tol_332_d_dollo.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/distribution.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PhyloXML/example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Stockholm/simple.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Stockholm/funny.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_NCBI_qblast exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_CodonUsage exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_Clustalw exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_SeqIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_GFF exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_Fasttree_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_translate exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_Location exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_geo exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_GenBank exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_KEGG exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_SubsMat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_SearchIO_legacy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_FSSP exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_HMMCasino exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_GFF2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_ClustalOmega_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_property_manager exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_File exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_AlignIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_align exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_Clustalw_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_PDB exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/output/test_AlignIO_MauveIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2212L_tblastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2201L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2215L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastp_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastx_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2212L_blastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastx_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastx_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2212L_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastx_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_phiblast_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastx_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_phiblast_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2222_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_phiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2220L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastp_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2218_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_010.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2216L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastp_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2202L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_006.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2222_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_009.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2102L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastx_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2218L_rpsblast_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2220L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2228_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_phiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2212L_tblastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2012L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastx_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/mirna.tab exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2014L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2208L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/wnts.xml.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2014L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2230_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_012.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_phiblast_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2202L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2221L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2218L_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/wnts.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_tblastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastn_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2218_blastp_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastn_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastn_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2011L_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastp_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastn_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2212L_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastn_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_013.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2228_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastx_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2222L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_tblastx_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_blastp_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastx_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2222_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/xml_2226_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_011.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_phiblast_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2202L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2226_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/tab_2226_tblastn_008.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/text_2010L_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/mirna.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Blast/html_msgid_29_blastx_001.html exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Registry/EDD_RAT.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Registry/seqs.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Registry/bt001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GFF/NC_001802.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GFF/NC_001802lc.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GFF/multi.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GFF/NC_001422.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GFF/NC_001802x.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/sam2.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1_header.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1_refresh.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/bam1.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/readme.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/ex1_header.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/bam2.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/sam1.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/bam1_sorted.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SamBam/bam2_sorted.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/UniGene/Mdm_partial.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/UniGene/Hs.2.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/UniGene/Eca.1.2425.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/RepBase23.02.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/DD231055_edited2.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/kipo_prt_sample.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/embl_with_0_line.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/TRBG361.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/DD231055_edited.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/SC10H5.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/hla_3260_sample.imgt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/AE017046.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/epo_prt_selection.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/AAA03323.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/Human_contigs.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/101ma_no_coords.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/location_wrap.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/U87107.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/A04195.imgt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/patents.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/DS830848.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/EMBL/xx_after_co.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Affy/affy_v4_example.CEL exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Affy/affy_v3_example.CEL exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/wrong_sequence_indent.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/gbvrl1_start.seq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/bad_origin_wrap_linear.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/one_of.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/HM138502_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/pBAD30.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/1MRR_A.gp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/invalid_misc_feature.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/empty_version.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/cor6_6.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/negative_location.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/KF527485_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/DS830848.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/bad_loc_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_005816.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/bad_origin_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/noref.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_005816.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/protein_refseq.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/blank_seq.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/no_end_marker.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/cor6_6.gb.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/qualifier_escaping_write.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NT_019265.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NP_416719.gbwithparts exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/protein_refseq2.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_000932.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/iro.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/qualifier_escaping_read.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/EU851978.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/invalid_product.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_000932.gb.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/empty_accession.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_005816.ffn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_005816.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/no_origin_no_end.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/origin_line.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/bad_origin_wrap_CDS.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_005816.tsv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/arab1.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/pri1.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/NC_000932.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/EU851978_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/dbsource_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/extra_keywords.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/empty_feature_qualifier.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/KF527485.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/HM138502.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/GenBank/invalid_locus_line_spacing.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Cluster/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Cluster/cyano.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/IntelliGenetics/vpu_nucaligned.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/IntelliGenetics/VIF_mase-pro.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/IntelliGenetics/TAT_mase_nuc.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Mauve/simple.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Mauve/simple.xmfa.bbcols exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Mauve/simple.xmfa.backbone exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Mauve/simple.xmfa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/simple_bar.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_obj_frag_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigils.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map03070_transparency.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/random_organism.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/labels_default.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrows.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_labels.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/scatter_test.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map01100_widths.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_region_circular.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/tRNA_chrom.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/multi_bar.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigils.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/organism.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/scatter_test_1.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map01100_original.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/tRNA_chrom_sf.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_labels_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_region_linear.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/line_graph_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/spiral_test.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_region_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigils_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_labels.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_obj_frag_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_meth_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/labels_default.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/square_test.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/scatter_test_7.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/organism.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_region_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_meth_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map01100_transparency.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map03070_colors.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/map03070_original.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrows_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/line_graph.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_obj_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_arrows.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/labels_default_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/organism.eps exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_by_obj_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/alignace.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/transfac.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/mast.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/meme.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/meme.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/meme.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/mast.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/meme.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/REB1.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/mast.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/SRF.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Motif/Arnt.sites exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_protein2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_q_multiple_vulgar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_ungapped.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_cdna2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_coding2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_q_none.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_q_multiple.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_coding2coding.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_genome2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_ungapped_trans.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_protein2dna.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_est2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_cigar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_affine_local.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_dna2protein.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Exonerate/exn_22_m_ner.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/tolweb.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/characters.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/meta_taxa.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/edgelabels.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/trees-uris.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/taxa.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/treebase-record.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/trees.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/nexml.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/timetree.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/sets.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/phenoscape.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeXML/meta_types.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeuralNetwork/repeat.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NeuralNetwork/enolase.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/ExtendedPhylip/primates.phyx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/protein_count.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/acc_rep_mat.pik exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/redAADistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/protein_freq.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/aaDistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SubsMat/redAltAADistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme_v_4_11_4.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/alignace.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/transfac.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/mast.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/mast.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/REB1.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/mast.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/SRF.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/minimal_test.meme exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/Arnt.sites exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/motifs/meme.rna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/haplo2.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/haplo.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/c2line.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/c3line.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/big.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/c3space.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/c2space.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PopGen/haplo3.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/test.new exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/ByteOrderMarkFile.nwk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/test_Nexus_input.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/bats.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/codonposset.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Nexus/int_node_labels.nwk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NBRF/Cw_prot.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NBRF/clustalw.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NBRF/DMA_nuc.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NBRF/B_nuc.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/NBRF/DMB_prot.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/rna_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/global_species_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/protein_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/corrupt_example2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/corrupt_example1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/SeqXML/dna_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Ace/consed_sample.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Ace/seq.cap.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Ace/contig1.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Wise/human_114_g01_exons.fna_01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Wise/human_114_g02_exons.fna_01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/test.log exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/msa.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/majority_ref.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/upgma.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/strict_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/consensus_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/adam_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/nj.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/trees.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/neighbor_trees.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/TreeConstruction/pars3.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/egfr_id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/drosophilla.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/nucl2.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/pro1.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/egfr_nucl.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/nucl3.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/egfr_pro.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/pro5.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/pro4.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/nucl1.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/adh.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/pro2.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/nucl5.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/pro3.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/codonalign/nucl4.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/Plates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/Plate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/Plate_2.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/BadPlate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/SmallPlate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/SmallPlates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/phenotype/SmallPlate_2.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/dups.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/aster_no_wrap.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output006.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output015.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/loveliesbleeding.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output016.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output010.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/phlox.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output012.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output007.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/lupine.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output009.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/f003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output013.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/lavender.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/sweetpea.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/fa01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output003.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/rosemary.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output014.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output005.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/f002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/rose.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output001.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/centaurea.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/f001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/aster.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/wisteria.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output008.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output011.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output004.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/output002.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Fasta/elderberry.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/horses.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/interlaced2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/hennigian.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/horses.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/sequential.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/reference_dna.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/interlaced.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/random.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/sequential2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phylip/reference_dna2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/einfo3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/nucleotide1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/einfo1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/epost2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/taxonomy.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/egquery2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/nucleotide2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/protein.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/einfo2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed3.html exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/ncbi_mim.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/pubmed1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/epost3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esummary3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/egquery1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/einfo4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/journals.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/efetch_schemas.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/espell.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/epost1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/esearch5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Entrez/elink2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_at_plus.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_unit_sep.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_rna_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_at_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/illumina_full_range_original_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_full_range_original_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/illumina_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/wrapping_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_spaces.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_dna_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/longreads_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/illumina_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/tricky.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example_dos.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/wrapping_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_in_title.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/longreads_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_dna_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/longreads_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_in_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_null.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_rna_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_short_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/illumina_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_example.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_vtab.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_dna_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_double_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/longreads_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_del.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_in_plus.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_rna_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example_dos.fastq.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example.fastq.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_no_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_93.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_diff_ids.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_tabs.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_double_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/wrapping_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/example.fastq.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_space.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_rna_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/wrapping_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_long_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_escape.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/misc_dna_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/zero_length.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_qual_tab.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/sanger_full_range_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_at_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/error_trunc_in_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/solexa_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Quality/illumina_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/UniProt/goa_yeast.gaf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/emboss_pair_aln_full_blank_line.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/bac_find.psearch exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/short.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/no_oligo.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/needle.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/water2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/alignret.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/cds_reverse.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/matcher_simple.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/bac_find.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/cds_forward.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/NirK.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/needle_asis.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/matcher_pair.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/NirK_full.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/water.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Emboss/internal_oligo.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BWA/HNSCC1_2_truncated.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BWA/human_g1k_v37_truncated.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/BWA/HNSCC1_1_truncated.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1MOM_min.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/3JQH.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/ions.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.xyzr exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2OFG.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/dssp_xtra_Sander.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/occupancy.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.rsa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/a_structure.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/4Q9R_min.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/alignment_file.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/4ZHL.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1SSU_mod.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/Sander_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2XHE.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2XHE.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/4CUP.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1SSU_mod.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/a_structure.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2BEG_noheader.dssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/lib_10_z_5.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/4CUP.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1LCD.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2BEG.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1LCD.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/Miller_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2BEG.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1A8O.asa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/4ZHL.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/Wilke_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/2BEG.dssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/PDB/1AS5.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/foki.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/bamii.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/foki.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/bamii.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/pvuii.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/taqi.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/cac81.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/crei.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/taqi.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/pvuii.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/crei.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Rebase/cac81.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/Meta7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/meta2.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/Meta4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/Meta8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/Meta3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/Meta6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/meta9.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MetaTool/meta.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_index_at_start.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_no_manifest.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/invalid_paired_E3MFGYR02.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/invalid_greek_E3MFGYR02.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/triple_sff_rel_paths.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_at_end.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_index_in_middle.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/triple_sff.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/paired.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/greek.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_at_start.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_big.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_bad.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/bundle_without_target.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_test.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/unfinished.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/humor.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/cnksr3.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/wrong_version.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/invalid.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_bad.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/length_coords_mismatch.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_big.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/corrupt.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/bug2453.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/MAF/ucsc_mm9_chr10.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phd/phd_454 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phd/phd_solexa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phd/phd2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Tests/Phd/phd1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ls_orchid.gbk.bz2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/opuntia.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/make_subsmat.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/protein.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/swissprot.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/opuntia.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ls_orchid.gbk.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/my_blast.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/alpha.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/Plates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ls_orchid.gbk.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/opuntia.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/PF05371_seed.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/my_blat.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ec_5.4.2.2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/m_cold.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/beta.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/.flake8 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/fasta_dictionary.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/simple.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/www_blast.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ACT_example.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/clustal_run.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/fasta_iterator.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/getgene.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ls_orchid.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/ls_orchid.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/nmr/noed.xpk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/examples/nmr/simplepredict.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_pdb.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_motifs.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_advanced.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_kegg.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seq_annot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_entrez.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_introduction.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_searchio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_graphics.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_quick_start.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_align.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_appendix.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_phenotype.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_phylo.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_cluster.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_popgen.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_phylo.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_uniprot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seqio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_testing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_appendix.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_cluster.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_learning.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_introduction.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seqio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_blast.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_motifs.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_kegg.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seq_objects.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_contributing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_graphics.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_align.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_quick_start.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seq_objects.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_learning.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_entrez.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_seq_annot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_advanced.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_cookbook.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_searchio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_cookbook.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_contributing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_phenotype.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_blast.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_pdb.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_testing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_popgen.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/Doc/Tutorial/chapter_uniprot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python3.7/dist-packages/home/.cache/matplotlib/fontlist-v300.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_pairwise_aligner.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Muscle_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_AbiIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_yn00.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_SeqXML.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/common_BioSQL_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_seq.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Cla.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_Superimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDBList.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_SeqXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez_parser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Consensus.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Pathway.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/requires_internet.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Chi2.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TogoWS.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_align.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_vectors.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Muscle_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_translate.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_geo.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/requires_wise.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_MarkovModel.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_PhylipIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_lowess.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsBitmaps.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_CDAO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_Polypetide.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_FSSP.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Mafft_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CelFile.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_interproscan_xml.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_motifs_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Mafft_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_networkx.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_EmbossIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prosite1.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_FastaIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Pathway.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/search_tests_common.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_features.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output.best.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/requires_internet.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Residues.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ClustalOmega_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Application.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Ace.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_FastaIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_pairwise2.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/run_tests.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenBank.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_HMMCasino.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_write.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Probcons_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBI_qblast.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBI_BLAST_tools.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Emboss.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_tab.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Medline.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_ClustalIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBIXML.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_samtools_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Fasttree_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SwissProt.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TogoWS.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_File.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_codonalign.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_MauveIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_nographics.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_File.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Prank_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_mmtf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenomeDiagram.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_QCPSuperimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Cluster.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SubsMat.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Location.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Enzyme.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIF2Dict.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CAPS.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Cluster.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_cellosaurus.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phd.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ExPASy.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/.coveragerc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_baseml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_KDTree.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_UniGene.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqFeature.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Ace.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_mmtf_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/common_BioSQL_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqFeature.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsGeneral.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Dom.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqUtils.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Wise.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Hie.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Tutorial.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDBList.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_mmtf.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_samtools_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Nexus.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_EmbossPrimer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_convert.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_convert.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Scop.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Prank_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_matplotlib.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phd.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_interproscan_xml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PhyloXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_EmbossPrimer.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_write.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PhyloXML.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_UniGene.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_kNN.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prosite2.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_motifs.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsGeneral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_MafIO_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TCoffee_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_QualityIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_DSSP_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Fasttree_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_EMBL_unittest.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_phenotype.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_ClustalIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Raf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_psycopg2_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Clustalw_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_MarkovModel.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_MafIO_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Dialign_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_model.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_vectors.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_RCSBFormats.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CodonUsage.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Crystal.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_MySQLdb_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsChromosome.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_codonalign.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_ResidueDepth.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_Insdc.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_mmtf_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Medline.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_features.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prosite2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Cla.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SVDSuperimposer.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_MauveIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignInfo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ProtParam.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Compass.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez_parser.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_PhylipIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Nexus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_align.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_legacy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Crystal.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_Polypetide.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Residues.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Uniprot.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Tutorial.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/biosql.ini.appveyor exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenBank.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Dialign_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_ResidueDepth.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_networkx.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/search_tests_common.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_FSSP.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsDistribution.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KeyWList.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/.flake8 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_trie.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_phenotype_fit.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CodonUsage.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TreeConstruction.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SffIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_CDAO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Raf.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_raxml_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBITextParser.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_FastaIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/common_BioSQL.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsBitmaps.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/requires_wise.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_FragmentMapper.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_matplotlib.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KEGG_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_PdbIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Affy.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BWA_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_geo.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBIXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_trie.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_codeml.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Compass.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_StructureAlignment.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KDTree.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KDTree.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/seq_tests_common.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_StructureAlignment.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_psycopg2_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Chi2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TCoffee_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_RCSBFormats.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_sqlite3.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Enzyme.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CodonTable.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBITextParser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_phenotype.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIFParser.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Probcons_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Application.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Location.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Des.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBI_qblast.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_KDTree.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIF2Dict.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_MMCIFParser.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Astral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_psw.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output.best.fas exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_seq.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_NeXML.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PopGen_GenePop_nodepend.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_xml_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BWA_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsDistribution.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_raxml_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_baseml.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/common_BioSQL.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Clustalw_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_pairwise2.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqUtils.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_QCPSuperimposer.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SwissProt.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Scop.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_DSSP_tool.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/run_tests.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_bgzf.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_nographics.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqRecord.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_QualityIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_legacy.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_HMMGeneral.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Hie.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prosite1.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KGML_graphics.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Dom.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Emboss.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_Insdc.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KEGG.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignInfo.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenBank_unittest.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_codeml.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_kNN.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blast_text.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_cellosaurus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Seq_objs.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_exonerate_text_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/seq_tests_common.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KeyWList.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_convert.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Seq_objs.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_LogisticRegression.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_FragmentMapper.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_write.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ProtParam.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_phenotype_fit.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Des.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Affy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prodoc.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ClustalOmega_tool.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Uniprot.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_TreeConstruction.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_write.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_blat_psl.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_fasta_m10_index.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Wise.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SubsMat.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ExPASy.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_HMMCasino.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SearchIO_model.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_prodoc.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_FastaIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Consensus.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_convert.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NaiveBayes.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CAPS.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ColorSpiral.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_pairwise_aligner.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_bgzf.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_EMBL_unittest.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_motifs_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_motifs.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Restriction.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CelFile.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez_online.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NCBI_BLAST_tools.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SffIO.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Restriction.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Phylo_NeXML.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_ColorSpiral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SCOP_Astral.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_AbiIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PDB_Superimposer.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_translate.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_BioSQL_mysql_connector.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_lowess.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SVDSuperimposer.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_NaiveBayes.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenomeDiagram.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_LogisticRegression.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_psw.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_Entrez_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_PAML_yn00.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KEGG.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GraphicsChromosome.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/biosql.ini.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_KEGG_online.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_GenBank_unittest.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_HMMGeneral.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_CodonTable.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqRecord.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_AlignIO_EmbossIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO_PdbIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/test_SeqIO.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_35_002.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_34_001.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_34_002.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_34_005.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/mirna.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_34_003.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_34_001.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_34_003.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_34_002.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_34_004.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_34_004.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_35_002.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/pslx_34_005.pslx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blat/psl_35_001.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/compound.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/map03070.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/enzyme.4letter exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/compound.irregular exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/map00950.rea exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/enzyme.irregular exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/enzyme.new exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/map01100.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/ko00010.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/ko01100.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/enzyme.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/ko03070.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/gene.sample exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/KEGG/ko00253.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Enzymes/valine.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Enzymes/lipoprotein.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Enzymes/proline.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Enzymes/lactate.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/test.fsa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/no_smpl1.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/3100.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/fake.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/A6_1-DB3.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/3730.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/empty.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/310.ab1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Abi/test_data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Compass/comtest1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Compass/comtest2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp004 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp014 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp016 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/P84001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/keywlist2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/F2CXE6.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/R5HY77.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/uni003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp012 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/H2CNN8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp009 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp005 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp010 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.gff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp007 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp006 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/Q13639.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/uni001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp011 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp008 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp015 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.list exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/P97881.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.rdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/uni002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/sp013 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/multi_ex.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/keywlist.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/Q13639.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/F2CXE6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SwissProt/H2CNN8.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_platform.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/GSM645.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/GSM804.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_dual.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/GSM700.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_family.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_series.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/GSE16.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_affy_chp.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/soft_ex_affy.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Geo/GSM691.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/gen_results.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/gen_results.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/bad_results.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/tree_regexp_versatility.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/SE/SE-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/baseml_alpha1rho1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/baseml_SE.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml43.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml44c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml41.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/versions/baseml44.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/SE/SE-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model3-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model4-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model1-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model7-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model0-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model8-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model2-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model5-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/baseml/model/model6-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_5.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_4c.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00_long-4_8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Results/yn00/yn00-4_1.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Alignments/alignment.phylip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Alignments/aa_alignment.phylip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Alignments/lysinYangSwanson2002.nuc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Alignments/longnames.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Trees/lysin.trees exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Trees/lysin.trees.4.6 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Trees/bad.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Trees/species.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/bad3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/bad2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/bad1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/species.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/freeratio.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/SE.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/NSsite3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/aa_model0.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/aa_pairwise.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/codeml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/branchsiteA.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/m2a_rel.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/pairwise.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/all_NSsites.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/codeml/clademodelC.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model8.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nparK2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/SE.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nparK3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nparK1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model5.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/baseml.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model0.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/alpha1rho1.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model6.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nparK4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model7.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/model2.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo4.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/baseml/nhomo3.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00/yn00_long.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PAML/Control_files/yn00/yn00.ctl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Cellosaurus/cell_lines_3.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Cellosaurus/cell_lines_1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Cellosaurus/cell_lines_2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/dir.cla.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/testDom.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/raftest.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/dir.des.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/dir.hie.scop.txt_test exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/FSSP/1cnv.fssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Saf/saf1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/protein.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/cw02.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/opuntia.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/promals3d.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/odd_consensus.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/temp horses.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Clustalw/hedgehog.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BioSQL/cor6_6.db exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BioSQL/biosqldb-sqlite.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BioSQL/biosqldb-mysql.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BioSQL/biosqldb-pg.sql exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Medline/pubmed_result2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Medline/pubmed_result3.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Medline/pubmed_result1.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/CDAO/test.cdao exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00107.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00165.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00159.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00432.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00546.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/ps00488.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00640.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00100.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00424.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00113.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00933.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00144.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/prosite.excerpt.doc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00472.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00340.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00787.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Prosite/Doc/pdoc00149.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_010.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b2_hmmsearch_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_009.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b2_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_23_hmmpfam_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_008.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_007.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_20_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_22_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_30_hmmscan_002.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_005.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_005.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_31b1_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b2_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/domtab_30_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_22_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_21_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_003.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_24_hmmpfam_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmsearch_004.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_30_hmmscan_006.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b2_phmmer_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/tab_30_hmmscan_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Hmmer/text_31b1_hmmsearch_001.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/CodonUsage/HighlyExpressedGenes.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/InterProScan/test_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/phyloxml_examples.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/made_up.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/apaf.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/bcl_2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/o_tol_332_d_dollo.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/distribution.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PhyloXML/example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Stockholm/simple.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Stockholm/funny.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_NCBI_qblast exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_CodonUsage exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_Clustalw exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_SeqIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_GFF exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_Fasttree_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_translate exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_Location exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_geo exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_GenBank exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_KEGG exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_SubsMat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_SearchIO_legacy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_FSSP exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_HMMCasino exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_GFF2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_ClustalOmega_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_property_manager exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_File exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_AlignIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_align exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_Clustalw_tool exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_PDB exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/output/test_AlignIO_MauveIO exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2212L_tblastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2201L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2215L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastp_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastx_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2212L_blastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastx_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastx_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2212L_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastx_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_phiblast_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastx_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_phiblast_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2222_blastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_phiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2220L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastp_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2218_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_010.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2216L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastp_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_006.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2202L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_006.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2222_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_009.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2102L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastx_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2218L_rpsblast_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2220L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2228_tblastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_phiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2212L_tblastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2012L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastx_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastx_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/mirna.tab exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastp_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2014L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2208L_psiblast_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastn_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/wnts.xml.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2014L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2230_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastx_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_012.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_phiblast_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2202L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2221L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2218L_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/wnts.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_tblastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastn_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2218_blastp_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastn_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastp_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastn_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2011L_blastn_003.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_005.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastp_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastn_004.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2212L_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastn_005.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_013.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastn_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2228_tblastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastx_003.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2222L_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_tblastx_002.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_blastp_007.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastx_004.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2222_blastx_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/xml_2226_blastp_001.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_011.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_phiblast_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2202L_blastn_001.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2226_blastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/tab_2226_tblastn_008.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/text_2010L_tblastn_002.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/mirna.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Blast/html_msgid_29_blastx_001.html exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Registry/EDD_RAT.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Registry/seqs.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Registry/bt001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GFF/NC_001802.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GFF/NC_001802lc.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GFF/multi.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GFF/NC_001422.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GFF/NC_001802x.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/sam2.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1_header.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1_refresh.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/bam1.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/readme.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/ex1_header.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/bam2.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/sam1.sam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/bam1_sorted.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SamBam/bam2_sorted.bam exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/UniGene/Mdm_partial.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/UniGene/Hs.2.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/UniGene/Eca.1.2425.data exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/RepBase23.02.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/DD231055_edited2.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/kipo_prt_sample.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/embl_with_0_line.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/TRBG361.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/DD231055_edited.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/SC10H5.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/hla_3260_sample.imgt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/AE017046.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/epo_prt_selection.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/AAA03323.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/Human_contigs.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/101ma_no_coords.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/location_wrap.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/U87107.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/A04195.imgt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/patents.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/DS830848.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/EMBL/xx_after_co.embl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Affy/affy_v4_example.CEL exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Affy/affy_v3_example.CEL exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/wrong_sequence_indent.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/gbvrl1_start.seq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/bad_origin_wrap_linear.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/one_of.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/HM138502_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/pBAD30.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/1MRR_A.gp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/invalid_misc_feature.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/empty_version.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/cor6_6.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/negative_location.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/KF527485_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/DS830848.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/bad_loc_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_005816.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/bad_origin_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/noref.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_005816.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/protein_refseq.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/blank_seq.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/no_end_marker.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/cor6_6.gb.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/qualifier_escaping_write.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NT_019265.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NP_416719.gbwithparts exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/protein_refseq2.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_000932.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/iro.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/qualifier_escaping_read.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/EU851978.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/invalid_product.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_000932.gb.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/empty_accession.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_005816.ffn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_005816.fna exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/no_origin_no_end.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/origin_line.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/bad_origin_wrap_CDS.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_005816.tsv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/arab1.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/pri1.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/NC_000932.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/EU851978_output.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/dbsource_wrap.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/extra_keywords.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/empty_feature_qualifier.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/KF527485.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/HM138502.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/GenBank/invalid_locus_line_spacing.gb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Cluster/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Cluster/cyano.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/IntelliGenetics/vpu_nucaligned.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/IntelliGenetics/VIF_mase-pro.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/IntelliGenetics/TAT_mase_nuc.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Mauve/simple.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Mauve/simple.xmfa.bbcols exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Mauve/simple.xmfa.backbone exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Mauve/simple.xmfa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/simple_bar.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_obj_frag_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigils.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map03070_transparency.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/random_organism.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/labels_default.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrows.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_labels.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/scatter_test.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map01100_widths.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_region_circular.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrow_shafts.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/tRNA_chrom.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/multi_bar.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigils.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/organism.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/scatter_test_1.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map01100_original.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/tRNA_chrom_sf.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_labels_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_BIGARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_region_linear.svg exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/line_graph_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/spiral_test.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_region_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_ARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigils_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_labels.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_obj_frag_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_short_OCTO.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_meth_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/labels_default.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/square_test.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/scatter_test_7.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/organism.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_region_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_meth_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map01100_transparency.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_JAGGY.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_OCTO_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map03070_colors.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/map03070_original.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrows_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/line_graph.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_obj_circular.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_arrows.png exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/labels_default_c.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/organism.eps exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_by_obj_linear.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Graphics/GD_sigil_long_ARROW.pdf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/alignace.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/transfac.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/mast.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/meme.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/meme.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/meme.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/mast.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/meme.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/REB1.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/mast.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/SRF.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Motif/Arnt.sites exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_protein2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_q_multiple_vulgar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_ungapped.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_cdna2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_coding2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_q_none.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_q_multiple.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_coding2coding.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_genome2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_ungapped_trans.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_protein2dna.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_est2genome.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_cigar.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_affine_local.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_dna2protein.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Exonerate/exn_22_m_ner.exn exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/tolweb.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/characters.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/meta_taxa.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/edgelabels.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/trees-uris.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/taxa.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/treebase-record.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/trees.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/nexml.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/timetree.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/sets.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/phenoscape.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeXML/meta_types.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeuralNetwork/repeat.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NeuralNetwork/enolase.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/ExtendedPhylip/primates.phyx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/protein_count.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/acc_rep_mat.pik exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/redAADistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/protein_freq.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/aaDistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SubsMat/redAltAADistrib.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme_v_4_11_4.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/alignace.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/transfac.dat exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/mast.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme.dna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/mast.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme.protein.tcm.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/REB1.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/mast.protein.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/SRF.pfm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/minimal_test.meme exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/Arnt.sites exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/motifs/meme.rna.oops.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/haplo2.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/haplo.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/c2line.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/c3line.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/big.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/c3space.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/c2space.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PopGen/haplo3.gen exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/test.new exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/ByteOrderMarkFile.nwk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/test_Nexus_input.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/bats.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/codonposset.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Nexus/int_node_labels.nwk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NBRF/Cw_prot.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NBRF/clustalw.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NBRF/DMA_nuc.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NBRF/B_nuc.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/NBRF/DMB_prot.pir exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/rna_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/global_species_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/protein_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/corrupt_example2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/corrupt_example1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/SeqXML/dna_example.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Ace/consed_sample.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Ace/seq.cap.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Ace/contig1.ace exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Wise/human_114_g01_exons.fna_01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Wise/human_114_g02_exons.fna_01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/test.log exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/msa.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/majority_ref.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/upgma.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/strict_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/consensus_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/adam_refs.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/nj.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/trees.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/neighbor_trees.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/TreeConstruction/pars3.tre exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/egfr_id exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/drosophilla.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/nucl2.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/pro1.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/egfr_nucl.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/nucl3.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/egfr_pro.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/pro5.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/pro4.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/nucl1.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/adh.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/pro2.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/nucl5.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/pro3.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/codonalign/nucl4.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/Plates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/Plate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/Plate_2.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/BadPlate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/SmallPlate.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/SmallPlates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/phenotype/SmallPlate_2.json exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/dups.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/aster_no_wrap.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output006.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output015.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/loveliesbleeding.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output016.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output010.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/phlox.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output012.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output007.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/lupine.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output009.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/f003 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output013.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/lavender.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/sweetpea.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/fa01 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output003.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/rosemary.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output014.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output005.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/f002 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/rose.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output001.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/centaurea.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/README exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/f001 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/aster.pro exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/wisteria.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output008.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output011.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output004.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/output002.m10 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Fasta/elderberry.nu exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/horses.tree exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/interlaced2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/hennigian.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/horses.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/sequential.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/reference_dna.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/interlaced.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/random.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/sequential2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phylip/reference_dna2.phy exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/einfo3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/nucleotide1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/einfo1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/epost2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/taxonomy.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/egquery2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/nucleotide2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/protein.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary7.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/einfo2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed3.html exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/ncbi_mim.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/pubmed1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/epost3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esummary3.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/egquery1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink8.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/einfo4.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/journals.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch6.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/efetch_schemas.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/espell.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/epost1.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/esearch5.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Entrez/elink2.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_at_plus.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_unit_sep.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_rna_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_at_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/illumina_full_range_original_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_full_range_original_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/illumina_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/wrapping_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_spaces.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_dna_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/longreads_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/illumina_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/tricky.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example_dos.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/wrapping_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_in_title.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/longreads_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_dna_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/longreads_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_in_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_null.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_rna_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_short_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/illumina_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_example.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_vtab.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_dna_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_double_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/longreads_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_del.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_in_plus.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_rna_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example_dos.fastq.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example.fastq.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_no_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_93.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_diff_ids.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_tabs.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_double_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/wrapping_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_faked.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/example.fastq.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_space.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_rna_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/wrapping_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_long_qual.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_escape.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/misc_dna_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/zero_length.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_qual_tab.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/sanger_full_range_original_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_at_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_full_range_as_illumina.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/error_trunc_in_seq.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/solexa_full_range_as_solexa.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Quality/illumina_full_range_as_sanger.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/UniProt/goa_yeast.gaf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/emboss_pair_aln_full_blank_line.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/bac_find.psearch exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/short.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/no_oligo.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/needle.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/water2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/alignret.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/cds_reverse.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/matcher_simple.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/bac_find.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/cds_forward.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/NirK.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/needle_asis.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/matcher_pair.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/NirK_full.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/water.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Emboss/internal_oligo.primer3 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BWA/HNSCC1_2_truncated.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BWA/human_g1k_v37_truncated.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/BWA/HNSCC1_1_truncated.fastq exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1MOM_min.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/3JQH.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/ions.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.xyzr exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2OFG.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/dssp_xtra_Sander.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/occupancy.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.rsa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/a_structure.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/4Q9R_min.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/alignment_file.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/4ZHL.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1SSU_mod.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/Sander_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2XHE.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2XHE.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/4CUP.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1SSU_mod.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/a_structure.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2BEG_noheader.dssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.mmtf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/lib_10_z_5.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/4CUP.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1LCD.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2BEG.pdb exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1LCD.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/Miller_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2BEG.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1A8O.asa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/4ZHL.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/Wilke_RASA.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/2BEG.dssp exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/PDB/1AS5.cif exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/foki.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/bamii.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/foki.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/bamii.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/pvuii.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/taqi.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/cac81.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/crei.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/taqi.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/pvuii.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/crei.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Rebase/cac81.htm exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/Meta7.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/meta2.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/Meta4.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/Meta8.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/Meta3.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/Meta6.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/meta9.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MetaTool/meta.out exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_index_at_start.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_no_manifest.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/invalid_paired_E3MFGYR02.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/invalid_greek_E3MFGYR02.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/triple_sff_rel_paths.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_at_end.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_index_in_middle.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/triple_sff.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/paired.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_random_10_reads.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/README.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/greek.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Roche/E3MFGYR02_alt_index_at_start.sff exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_big.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_bad.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/bundle_without_target.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_test.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/unfinished.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/humor.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/cnksr3.fa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/wrong_version.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/invalid.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_bad.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/length_coords_mismatch.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10_big.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/corrupt.idx exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/bug2453.maf exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/MAF/ucsc_mm9_chr10.mafindex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phd/phd_454 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phd/phd_solexa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phd/phd2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Tests/Phd/phd1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.bz2 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/www_blast.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/protein.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/swissprot.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.gz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/getgene.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/my_blast.xml exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/alpha.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Plates.csv exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk.bgz exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/opuntia.aln exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/PF05371_seed.sth exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/my_blat.psl exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ec_5.4.2.2.txt exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/m_cold.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/beta.faa exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/.flake8 exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_dictionary.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/simple.dnd exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/www_blast.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ACT_example.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/clustal_run.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/fasta_iterator.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/make_subsmat.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/getgene.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/swissprot.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.fasta exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/ls_orchid.gbk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/noed.xpk exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.pyc exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/examples/nmr/simplepredict.py exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_pdb.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_motifs.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_advanced.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_kegg.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_annot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_entrez.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_introduction.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_searchio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_graphics.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_quick_start.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_align.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_appendix.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phenotype.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phylo.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cluster.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_popgen.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phylo.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_uniprot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seqio.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_testing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_appendix.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cluster.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_learning.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_introduction.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seqio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_blast.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_motifs.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_kegg.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_objects.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_contributing.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_graphics.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_align.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_quick_start.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_objects.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_learning.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_entrez.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_seq_annot.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_advanced.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cookbook.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_searchio.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_cookbook.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_contributing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_phenotype.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_blast.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_pdb.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_testing.aux exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_popgen.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/Doc/Tutorial/chapter_uniprot.tex exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/python2.7/dist-packages/home/.cache/matplotlib/fontList.json exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: python-biopython (2), python-biopython-doc (0), python-biopython-sql (1), python3-biopython (2), python3-biopython-sql (1) * dh_installdocs: python-biopython (4), python-biopython-doc (4), python-biopython-sql (0), python3-biopython (0), python3-biopython-sql (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -O--buildsystem=pybuild install -d debian/python-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -q -mdebian/python-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python-biopython.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python-biopython.debug -- debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so objcopy --compress-debug-sections debian/python-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python-biopython.debug install -d debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -q -mdebian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -- debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so objcopy --compress-debug-sections debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug dh_strip -O--buildsystem=pybuild install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/c6 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/c6/1b84c0f1b0a24d93872208fd6a75ee19446572.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/c6/1b84c0f1b0a24d93872208fd6a75ee19446572.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/c6/1b84c0f1b0a24d93872208fd6a75ee19446572.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/c6/1b84c0f1b0a24d93872208fd6a75ee19446572.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/0e objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/0e/009ed923ab47f5306e3da82a540b8714e00557.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/0e/009ed923ab47f5306e3da82a540b8714e00557.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/0e/009ed923ab47f5306e3da82a540b8714e00557.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/0e/009ed923ab47f5306e3da82a540b8714e00557.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/85/bf2e348186d75e31086cd35fa8a9f7461b6cf7.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/85/bf2e348186d75e31086cd35fa8a9f7461b6cf7.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/85/bf2e348186d75e31086cd35fa8a9f7461b6cf7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/85/bf2e348186d75e31086cd35fa8a9f7461b6cf7.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/63 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/63/b84be9f03b670fed682960896f38149e053a50.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/63/b84be9f03b670fed682960896f38149e053a50.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/63/b84be9f03b670fed682960896f38149e053a50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/63/b84be9f03b670fed682960896f38149e053a50.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/00/29d9e4e56bad536a55ba474061fbea2215ad17.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/00/29d9e4e56bad536a55ba474061fbea2215ad17.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/00/29d9e4e56bad536a55ba474061fbea2215ad17.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/00/29d9e4e56bad536a55ba474061fbea2215ad17.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/a7/7d2657e581d698cfa1ba2dededc85108fa1cd5.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/a7/7d2657e581d698cfa1ba2dededc85108fa1cd5.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/a7/7d2657e581d698cfa1ba2dededc85108fa1cd5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/a7/7d2657e581d698cfa1ba2dededc85108fa1cd5.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/30/1ddb427dbe02d94ce2d96d6bf197e7542ad93c.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/30/1ddb427dbe02d94ce2d96d6bf197e7542ad93c.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/30/1ddb427dbe02d94ce2d96d6bf197e7542ad93c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/30/1ddb427dbe02d94ce2d96d6bf197e7542ad93c.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/42/4f807c713a39f85b0541bd979ec56cee18f961.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/42/4f807c713a39f85b0541bd979ec56cee18f961.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/42/4f807c713a39f85b0541bd979ec56cee18f961.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/42/4f807c713a39f85b0541bd979ec56cee18f961.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/87b96e33b1ff8ecce6140027a9519455b68b7c.debug chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/87b96e33b1ff8ecce6140027a9519455b68b7c.debug chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/87b96e33b1ff8ecce6140027a9519455b68b7c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/87b96e33b1ff8ecce6140027a9519455b68b7c.debug debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so install -d debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python-biopython/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python-biopython/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python-biopython/usr/lib/debug install -d debian/.debhelper/python-biopython/dbgsym-root/usr/share/doc ln -s python-biopython debian/.debhelper/python-biopython/dbgsym-root/usr/share/doc/python-biopython-dbgsym install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/b1acd5588cabc26d1e542758d217a296c56ee5.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/b1acd5588cabc26d1e542758d217a296c56ee5.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/b1acd5588cabc26d1e542758d217a296c56ee5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/b1acd5588cabc26d1e542758d217a296c56ee5.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/83f2a588123ce9e6083b00be8eced4a93eeacf.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/83f2a588123ce9e6083b00be8eced4a93eeacf.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/83f2a588123ce9e6083b00be8eced4a93eeacf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/83f2a588123ce9e6083b00be8eced4a93eeacf.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/eb/9bfbc4480fd3f9ac55d6b6b0cd03238add9afa.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/eb/9bfbc4480fd3f9ac55d6b6b0cd03238add9afa.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/eb/9bfbc4480fd3f9ac55d6b6b0cd03238add9afa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/eb/9bfbc4480fd3f9ac55d6b6b0cd03238add9afa.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/08cf7b0c1f3d3783e0fbbf9c5af65bccf61d67.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/08cf7b0c1f3d3783e0fbbf9c5af65bccf61d67.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/08cf7b0c1f3d3783e0fbbf9c5af65bccf61d67.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d5/08cf7b0c1f3d3783e0fbbf9c5af65bccf61d67.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d0/8bf5838ed706d3f9932e21860667635b2db5d3.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d0/8bf5838ed706d3f9932e21860667635b2db5d3.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d0/8bf5838ed706d3f9932e21860667635b2db5d3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d0/8bf5838ed706d3f9932e21860667635b2db5d3.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/5719c09e43203dfa3619b502aa865a34942ebb.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/5719c09e43203dfa3619b502aa865a34942ebb.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/5719c09e43203dfa3619b502aa865a34942ebb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ff/5719c09e43203dfa3619b502aa865a34942ebb.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/480e50e094528b7c4b007cccd4df64bac8980c.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/480e50e094528b7c4b007cccd4df64bac8980c.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/480e50e094528b7c4b007cccd4df64bac8980c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/9f/480e50e094528b7c4b007cccd4df64bac8980c.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/58/e046b13a4e8a98d67456041bea8b8751d5ca7b.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/58/e046b13a4e8a98d67456041bea8b8751d5ca7b.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/58/e046b13a4e8a98d67456041bea8b8751d5ca7b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/58/e046b13a4e8a98d67456041bea8b8751d5ca7b.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/f3 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/f3/9caafa6ec5d6994fea646276830cfaa98b2f45.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/f3/9caafa6ec5d6994fea646276830cfaa98b2f45.debug chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/f3/9caafa6ec5d6994fea646276830cfaa98b2f45.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/f3/9caafa6ec5d6994fea646276830cfaa98b2f45.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-biopython/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biopython/usr/lib/debug install -d debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc ln -s python3-biopython debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc/python3-biopython-dbgsym dh_makeshlibs -O--buildsystem=pybuild rm -f debian/python-biopython/DEBIAN/shlibs rm -f debian/python3-biopython/DEBIAN/shlibs rm -f debian/python-biopython-doc/DEBIAN/shlibs rm -f debian/python-biopython-sql/DEBIAN/shlibs rm -f debian/python3-biopython-sql/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=pybuild install -d debian/python-biopython/DEBIAN dpkg-shlibdeps -Tdebian/python-biopython.substvars debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so install -d debian/python3-biopython/DEBIAN dpkg-shlibdeps -Tdebian/python3-biopython.substvars debian/python3-biopython/usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python-biopython/DEBIAN/postinst cat debian/python-biopython.postinst.debhelper >> debian/python-biopython/DEBIAN/postinst chmod 0755 -- debian/python-biopython/DEBIAN/postinst chown 0:0 -- debian/python-biopython/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biopython/DEBIAN/prerm cat debian/python-biopython.prerm.debhelper >> debian/python-biopython/DEBIAN/prerm chmod 0755 -- debian/python-biopython/DEBIAN/prerm chown 0:0 -- debian/python-biopython/DEBIAN/prerm printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/postinst cat debian/python3-biopython.postinst.debhelper >> debian/python3-biopython/DEBIAN/postinst chmod 0755 -- debian/python3-biopython/DEBIAN/postinst chown 0:0 -- debian/python3-biopython/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/prerm cat debian/python3-biopython.prerm.debhelper >> debian/python3-biopython/DEBIAN/prerm chmod 0755 -- debian/python3-biopython/DEBIAN/prerm chown 0:0 -- debian/python3-biopython/DEBIAN/prerm install -d debian/python-biopython-doc/DEBIAN install -d debian/python-biopython-sql/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python-biopython-sql/DEBIAN/postinst cat debian/python-biopython-sql.postinst.debhelper >> debian/python-biopython-sql/DEBIAN/postinst chmod 0755 -- debian/python-biopython-sql/DEBIAN/postinst chown 0:0 -- debian/python-biopython-sql/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biopython-sql/DEBIAN/prerm cat debian/python-biopython-sql.prerm.debhelper >> debian/python-biopython-sql/DEBIAN/prerm chmod 0755 -- debian/python-biopython-sql/DEBIAN/prerm chown 0:0 -- debian/python-biopython-sql/DEBIAN/prerm install -d debian/python3-biopython-sql/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/postinst cat debian/python3-biopython-sql.postinst.debhelper >> debian/python3-biopython-sql/DEBIAN/postinst chmod 0755 -- debian/python3-biopython-sql/DEBIAN/postinst chown 0:0 -- debian/python3-biopython-sql/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/prerm cat debian/python3-biopython-sql.prerm.debhelper >> debian/python3-biopython-sql/DEBIAN/prerm chmod 0755 -- debian/python3-biopython-sql/DEBIAN/prerm chown 0:0 -- debian/python3-biopython-sql/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python-biopython-doc.substvars echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -Pdebian/python-biopython-doc -UMulti-Arch echo misc:Depends= >> debian/python3-biopython-sql.substvars echo misc:Pre-Depends= >> debian/python3-biopython-sql.substvars dpkg-gencontrol -ppython3-biopython-sql -ldebian/changelog -Tdebian/python3-biopython-sql.substvars -Pdebian/python3-biopython-sql -UMulti-Arch echo misc:Depends= >> debian/python-biopython.substvars echo misc:Pre-Depends= >> debian/python-biopython.substvars install -d debian/.debhelper/python-biopython/dbgsym-root/DEBIAN dpkg-gencontrol -ppython-biopython -ldebian/changelog -Tdebian/python-biopython.substvars -Pdebian/.debhelper/python-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python-biopython-dbgsym "-DDepends=python-biopython (= \${binary:Version})" "-DDescription=debug symbols for python-biopython" "-DBuild-Ids=0029d9e4e56bad536a55ba474061fbea2215ad17 0e009ed923ab47f5306e3da82a540b8714e00557 301ddb427dbe02d94ce2d96d6bf197e7542ad93c 424f807c713a39f85b0541bd979ec56cee18f961 63b84be9f03b670fed682960896f38149e053a50 85bf2e348186d75e31086cd35fa8a9f7461b6cf7 a77d2657e581d698cfa1ba2dededc85108fa1cd5 c61b84c0f1b0a24d93872208fd6a75ee19446572 d587b96e33b1ff8ecce6140027a9519455b68b7c" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python:Provides} used, but is not defined chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control chown 0:0 -- debian/python3-biopython-sql/DEBIAN/control dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython-biopython -ldebian/changelog -Tdebian/python-biopython.substvars -Pdebian/python-biopython -UMulti-Arch chmod 0644 -- debian/python-biopython-doc/DEBIAN/control chown 0:0 -- debian/python-biopython-doc/DEBIAN/control echo misc:Depends= >> debian/python-biopython-sql.substvars echo misc:Pre-Depends= >> debian/python-biopython-sql.substvars dpkg-gencontrol -ppython-biopython-sql -ldebian/changelog -Tdebian/python-biopython-sql.substvars -Pdebian/python-biopython-sql -UMulti-Arch dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-biopython: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/python-biopython/DEBIAN/control chown 0:0 -- debian/python-biopython/DEBIAN/control echo misc:Depends= >> debian/python3-biopython.substvars echo misc:Pre-Depends= >> debian/python3-biopython.substvars install -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -Pdebian/.debhelper/python3-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-biopython-dbgsym "-DDepends=python3-biopython (= \${binary:Version})" "-DDescription=debug symbols for python3-biopython" "-DBuild-Ids=3183f2a588123ce9e6083b00be8eced4a93eeacf 58e046b13a4e8a98d67456041bea8b8751d5ca7b 9f480e50e094528b7c4b007cccd4df64bac8980c d08bf5838ed706d3f9932e21860667635b2db5d3 d508cf7b0c1f3d3783e0fbbf9c5af65bccf61d67 eb9bfbc4480fd3f9ac55d6b6b0cd03238add9afa f39caafa6ec5d6994fea646276830cfaa98b2f45 ff5719c09e43203dfa3619b502aa865a34942ebb ffb1acd5588cabc26d1e542758d217a296c56ee5" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python-biopython-sql: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/python-biopython-sql/DEBIAN/control chown 0:0 -- debian/python-biopython-sql/DEBIAN/control dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -Pdebian/python3-biopython -UMulti-Arch dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biopython: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/python3-biopython/DEBIAN/control chown 0:0 -- debian/python3-biopython/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/python3-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums chown 0:0 -- debian/python3-biopython-sql/DEBIAN/md5sums cd debian/python-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-biopython-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-biopython/DEBIAN/md5sums chown 0:0 -- debian/python-biopython/DEBIAN/md5sums cd debian/.debhelper/python-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/md5sums cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-biopython-doc/DEBIAN/md5sums chown 0:0 -- debian/python-biopython-doc/DEBIAN/md5sums cd debian/python-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-biopython-sql/DEBIAN/md5sums chown 0:0 -- debian/python-biopython-sql/DEBIAN/md5sums chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums chown 0:0 -- debian/python3-biopython/DEBIAN/md5sums cd debian/.debhelper/python3-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/python-biopython .. dpkg-deb --build debian/python3-biopython .. dpkg-deb --build debian/python-biopython-doc .. dpkg-deb --build debian/python3-biopython-sql .. INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-biopython-sql (in debian/python3-biopython-sql); do_strip: , oemstrip: pkgstriptranslations: processing python-biopython-doc (in debian/python-biopython-doc); do_strip: , oemstrip: pkgstriptranslations: processing python-biopython (in debian/python-biopython); do_strip: , oemstrip: pkgstriptranslations: processing python3-biopython (in debian/python3-biopython); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python3-biopython-sql/DEBIAN/control, package python3-biopython-sql, directory debian/python3-biopython-sql INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... pkgstripfiles: processing control file: debian/python-biopython-doc/DEBIAN/control, package python-biopython-doc, directory debian/python-biopython-doc INFO: pkgstripfiles: waiting for lock (python-biopython-doc) ... pkgstripfiles: processing control file: debian/python-biopython/DEBIAN/control, package python-biopython, directory debian/python-biopython pkgstripfiles: Truncating usr/share/doc/python-biopython/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-biopython ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-biopython' in '../python-biopython_1.73+dfsg-1ubuntu1_amd64.deb'. pkgstripfiles: processing control file: debian/python3-biopython/DEBIAN/control, package python3-biopython, directory debian/python3-biopython pkgstripfiles: Truncating usr/share/doc/python3-biopython/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-biopython ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.73+dfsg-1ubuntu1_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... pkgstripfiles: Truncating usr/share/doc/python-biopython-doc/changelog.Debian.gz to topmost ten records pkgstripfiles: Disabled PNG optimization for -doc package python-biopython-doc (to save build time) dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.73+dfsg-1ubuntu1_all.deb'. INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... install -d debian/.debhelper/scratch-space/build-python-biopython dpkg-deb --build debian/.debhelper/python-biopython/dbgsym-root debian/.debhelper/scratch-space/build-python-biopython INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... install -d debian/.debhelper/scratch-space/build-python3-biopython dpkg-deb --build debian/.debhelper/python3-biopython/dbgsym-root debian/.debhelper/scratch-space/build-python3-biopython INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python-biopython-dbgsym (in debian/.debhelper/python-biopython/dbgsym-root); do_strip: , oemstrip: INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-biopython-dbgsym (in debian/.debhelper/python3-biopython/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... pkgstripfiles: processing control file: debian/.debhelper/python-biopython/dbgsym-root/DEBIAN/control, package python-biopython-dbgsym, directory debian/.debhelper/python-biopython/dbgsym-root dpkg-deb: building package 'python-biopython-dbgsym' in 'debian/.debhelper/scratch-space/build-python-biopython/python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.deb'. pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com Renaming python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.deb to python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb mv debian/.debhelper/scratch-space/build-python-biopython/python-biopython-dbgsym_1.73\+dfsg-1ubuntu1_amd64.deb ../python-biopython-dbgsym_1.73\+dfsg-1ubuntu1_amd64.ddeb pkgstripfiles: processing control file: debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control, package python3-biopython-dbgsym, directory debian/.debhelper/python3-biopython/dbgsym-root dpkg-deb: building package 'python3-biopython-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-biopython/python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.deb'. Renaming python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.deb to python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb mv debian/.debhelper/scratch-space/build-python3-biopython/python3-biopython-dbgsym_1.73\+dfsg-1ubuntu1_amd64.deb ../python3-biopython-dbgsym_1.73\+dfsg-1ubuntu1_amd64.ddeb INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... dpkg-deb --build debian/python-biopython-sql .. INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python-biopython-sql (in debian/python-biopython-sql); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (python3-biopython-sql) ... pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python-biopython-sql/DEBIAN/control, package python-biopython-sql, directory debian/python-biopython-sql Searching for duplicated docs in dependency python-biopython... symlinking changelog.Debian.gz in python-biopython-sql to file in python-biopython pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-biopython-sql ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-biopython-sql' in '../python-biopython-sql_1.73+dfsg-1ubuntu1_all.deb'. Searching for duplicated docs in dependency python3-biopython... symlinking changelog.Debian.gz in python3-biopython-sql to file in python3-biopython pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-biopython-sql ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.73+dfsg-1ubuntu1_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../python-biopython_1.73+dfsg-1ubuntu1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190304-2002 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ python-biopython_1.73+dfsg-1ubuntu1_amd64.changes: -------------------------------------------------- Format: 1.8 Date: Mon, 04 Mar 2019 12:21:32 -0700 Source: python-biopython Binary: python-biopython python-biopython-doc python-biopython-sql python3-biopython python3-biopython-sql Architecture: amd64 all Version: 1.73+dfsg-1ubuntu1 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Adam Conrad Description: python-biopython - Python library for bioinformatics (implemented in Python 2) python-biopython-doc - Documentation for the Biopython library python-biopython-sql - Biopython support for the BioSQL database schema (Python 2) python3-biopython - Python library for bioinformatics (implemented in Python 3) python3-biopython-sql - Biopython support for the BioSQL database schema (Python 3) Changes: python-biopython (1.73+dfsg-1ubuntu1) disco; urgency=medium . * debian/patches/test_phenotype_fit-ppc64el.patch: - reduce precision on one test, per upstream recommendation at: https://github.com/biopython/biopython/issues/1945 Checksums-Sha1: 5caa3b1e8952da18a594c4646db0b2fe91a8f23e 298584 python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 5296f958fd55242fdeeacbe986f4c63f0a9faa3a 14121136 python-biopython-doc_1.73+dfsg-1ubuntu1_all.deb fe59bd0d76e0df94e96de2a15f26e1ffda1ad045 26328 python-biopython-sql_1.73+dfsg-1ubuntu1_all.deb 34325b9ec3e8cec41eef66fade6c9d7956a1a079 15043 python-biopython_1.73+dfsg-1ubuntu1_amd64.buildinfo 162d1ff561c06ed4688cab07c2856adc42df3111 1329964 python-biopython_1.73+dfsg-1ubuntu1_amd64.deb ce0667988c248fab75c4c32bc9c74f687b89afed 320092 python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 6e504cc92119a88a6a28eaf731c052e592e16a81 26412 python3-biopython-sql_1.73+dfsg-1ubuntu1_all.deb 310776818191687630945b6463259c866797323a 1283076 python3-biopython_1.73+dfsg-1ubuntu1_amd64.deb Checksums-Sha256: 26da34acc578a752f1c7540a2643300864ade887f294e86b6cff1cf9defbd3dd 298584 python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 09f6c5c6b12aebccb9f4e43aa16578aa86c5a2f6373fb660bf0a734051e029d6 14121136 python-biopython-doc_1.73+dfsg-1ubuntu1_all.deb c89007ecb62e05c99fa1096b8addd74234e4d775755818a6e27ebf2bf691c7a3 26328 python-biopython-sql_1.73+dfsg-1ubuntu1_all.deb 9a9240992b01ca65913be5db4114b9217efb52e01da3d3dbe5ce5af4bfba80d3 15043 python-biopython_1.73+dfsg-1ubuntu1_amd64.buildinfo 092f55f1857002aba2eee17c3665eb8cb8621f879861a7384de67f485a327a52 1329964 python-biopython_1.73+dfsg-1ubuntu1_amd64.deb 5bfed49399b16600e7242549ecf6261706fe3afc2372bb9e66a2ad9ac60bea57 320092 python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 5b77d6835d554c760ebce6c8ff8dae4b3f6348c66a28dbdbac03055e3c7fdb6c 26412 python3-biopython-sql_1.73+dfsg-1ubuntu1_all.deb 36d5baf2726efb6eb6c7b7081add1e49b4cc60b37517ac5fe79387756114f514 1283076 python3-biopython_1.73+dfsg-1ubuntu1_amd64.deb Files: ee6e053f8a0c2b66e8358012f92fa22a 298584 debug optional python-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 73f346391eb9ef774ac2fac9c43636f4 14121136 doc optional python-biopython-doc_1.73+dfsg-1ubuntu1_all.deb bbdccc7e1bb0903d8f56e4ce34ccc350 26328 python optional python-biopython-sql_1.73+dfsg-1ubuntu1_all.deb 9c5e145f41f95e29f85074f76f7ab22b 15043 python optional python-biopython_1.73+dfsg-1ubuntu1_amd64.buildinfo 0d0807b188b1291b905604a4767005d7 1329964 python optional python-biopython_1.73+dfsg-1ubuntu1_amd64.deb 8a03c9845f0f68383da7fad75b7e8ab9 320092 debug optional python3-biopython-dbgsym_1.73+dfsg-1ubuntu1_amd64.ddeb 0a3324142acd6a5a80b36c2cd3028029 26412 python optional python3-biopython-sql_1.73+dfsg-1ubuntu1_all.deb ccc816e9a31b217f37b3c0f30b4b5ad5 1283076 python optional python3-biopython_1.73+dfsg-1ubuntu1_amd64.deb Original-Maintainer: Debian Med Packaging Team +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python-biopython-doc_1.73+dfsg-1ubuntu1_all.deb ----------------------------------------------- new debian package, version 2.0. size 14121136 bytes: control archive=35508 bytes. 629 bytes, 17 lines control 153114 bytes, 1469 lines md5sums Package: python-biopython-doc Source: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: all Maintainer: Ubuntu Developers Installed-Size: 17086 Recommends: python-biopython (= 1.73+dfsg-1ubuntu1) Section: doc Priority: optional Homepage: http://biopython.org Description: Documentation for the Biopython library Documentation and examples about how to use the Biopython library. . This package also contains the unit tests of the test suite to enable reproducing the test results. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2019-03-04 19:21 ./ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc-base/ -rw-r--r-- root/root 598 2019-01-11 22:23 ./usr/share/doc-base/biopython-tutorial drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/ -rw-r--r-- root/root 1079648 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/Tutorial.html -rw-r--r-- root/root 2344052 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/Tutorial.pdf.gz -rw-r--r-- root/root 5738 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial.tex.gz -rw-r--r-- root/root 235561 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/Tutorial.txt.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/ -rw-r--r-- root/root 4015 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_advanced.tex.gz -rw-r--r-- root/root 21233 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_align.tex.gz -rw-r--r-- root/root 4087 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_appendix.tex -rw-r--r-- root/root 7688 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_blast.tex.gz -rw-r--r-- root/root 15622 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cluster.tex.gz -rw-r--r-- root/root 3262 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_contributing.tex.gz -rw-r--r-- root/root 21820 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cookbook.tex.gz -rw-r--r-- root/root 23353 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_entrez.tex.gz -rw-r--r-- root/root 12371 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_graphics.tex.gz -rw-r--r-- root/root 6368 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_introduction.tex.gz -rw-r--r-- root/root 1993 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_kegg.tex.gz -rw-r--r-- root/root 6217 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_learning.tex.gz -rw-r--r-- root/root 15489 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_motifs.tex.gz -rw-r--r-- root/root 15881 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_pdb.tex.gz -rw-r--r-- root/root 3591 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phenotype.tex.gz -rw-r--r-- root/root 12060 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_phylo.tex.gz -rw-r--r-- root/root 1821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_popgen.tex.gz -rw-r--r-- root/root 5676 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_quick_start.tex.gz -rw-r--r-- root/root 14485 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_searchio.tex.gz -rw-r--r-- root/root 12575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_annot.tex.gz -rw-r--r-- root/root 10344 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seq_objects.tex.gz -rw-r--r-- root/root 17121 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_seqio.tex.gz -rw-r--r-- root/root 6785 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_testing.tex.gz -rw-r--r-- root/root 7401 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_uniprot.tex.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/api/ -rw-r--r-- root/root 2868 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/api/conf.py.gz -rw-r--r-- root/root 451 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/api/index.rst -rw-r--r-- root/root 159550 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/biopdb_faq.pdf.gz -rw-r--r-- root/root 14892 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/biopdb_faq.tex.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/cookbook/ -rw-r--r-- root/root 579 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/cookbook/README drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/cookbook/Restriction/ -rw-r--r-- root/root 113149 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/cookbook/Restriction/Restriction.html -rw-r--r-- root/root 17606 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/cookbook/Restriction/Restriction.md.gz -rw-r--r-- root/root 7048 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/doc.rst.gz -rw-r--r-- root/root 7168 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/doc.tex.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/examples/ -rw-r--r-- root/root 552 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/.flake8 -rw-r--r-- root/root 1678 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ACT_example.py.gz -rw-r--r-- root/root 1576 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/PF05371_seed.sth -rw-r--r-- root/root 48621 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/Plates.csv.gz -rw-r--r-- root/root 2695 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/Proux_et_al_2002_Figure_6.py.gz -rw-r--r-- root/root 156 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/alpha.faa -rw-r--r-- root/root 161 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/beta.faa -rw-r--r-- root/root 2288 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/clustal_run.py -rw-r--r-- root/root 43005 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ec_5.4.2.2.txt.gz -rw-r--r-- root/root 2142 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/fasta_dictionary.py -rw-r--r-- root/root 935 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/fasta_iterator.py -rw-r--r-- root/root 2378 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/getgene.py.gz -rw-r--r-- root/root 10880 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.fasta.gz -rw-r--r-- root/root 29659 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.bgz.gz -rw-r--r-- root/root 20040 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.bz2 -rw-r--r-- root/root 24371 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.gz -rw-r--r-- root/root 1263 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/m_cold.fasta -rw-r--r-- root/root 1211 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/make_subsmat.py -rw-r--r-- root/root 8127 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/my_blast.xml.gz -rw-r--r-- root/root 2068 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/my_blat.psl drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/examples/nmr/ -rw-r--r-- root/root 1489 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/nmr/noed.xpk -rw-r--r-- root/root 2361 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/nmr/simplepredict.py.gz -rw-r--r-- root/root 1179 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/opuntia.aln.gz -rw-r--r-- root/root 352 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/opuntia.dnd -rw-r--r-- root/root 847 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/opuntia.fasta.gz -rw-r--r-- root/root 1994 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/protein.aln.gz -rw-r--r-- root/root 25 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/simple.dnd -rw-r--r-- root/root 766 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/swissprot.py -rw-r--r-- root/root 1879 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/examples/www_blast.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/ -rw-r--r-- root/root 3498 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/BlastRecord.dia -rw-r--r-- root/root 83852 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/BlastRecord.png -rw-r--r-- root/root 4939 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_heads.png -rw-r--r-- root/root 4744 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_shafts.png -rw-r--r-- root/root 20502 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_labels.png -rw-r--r-- root/root 19950 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/GD_sigils.png -rw-r--r-- root/root 2513 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/PSIBlastRecord.dia -rw-r--r-- root/root 45003 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/PSIBlastRecord.png -rw-r--r-- root/root 244139 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/SRR001666.png -rw-r--r-- root/root 7955 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo.pdf.gz -rw-r--r-- root/root 21711 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo.svg -rw-r--r-- root/root 135570 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_l.png -rw-r--r-- root/root 64156 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_m.png -rw-r--r-- root/root 121222 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_old.jpg -rw-r--r-- root/root 29744 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_s.png -rw-r--r-- root/root 19480 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_xs.png -rw-r--r-- root/root 29392 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/dot_plot.png -rw-r--r-- root/root 40974 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/dot_plot_scatter.png -rw-r--r-- root/root 18633 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/gc_plot.png -rw-r--r-- root/root 16158 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/hist_plot.png -rw-r--r-- root/root 25057 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf-zoom.png -rw-r--r-- root/root 66217 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf.png -rw-r--r-- root/root 11714 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-color-draw.png -rw-r--r-- root/root 13914 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-color.png -rw-r--r-- root/root 13097 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-dot.png -rw-r--r-- root/root 23575 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-draw-example.png -rw-r--r-- root/root 15045 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-rooted.png -rw-r--r-- root/root 11739 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/phylo-simple-draw.png -rw-r--r-- root/root 17436 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular.png -rw-r--r-- root/root 56612 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular_nice.png -rw-r--r-- root/root 5301 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear.png -rw-r--r-- root/root 14401 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear_nice.png -rw-r--r-- root/root 12798 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.pdf.gz -rw-r--r-- root/root 13699 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.png -rw-r--r-- root/root 2251 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/smcra.dia -rw-r--r-- root/root 7332 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/smcra.eps.gz -rw-r--r-- root/root 17774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/smcra.png -rw-r--r-- root/root 30994 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.pdf.gz -rw-r--r-- root/root 235073 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.png -rw-r--r-- root/root 70957 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/three_track_cl.png -rw-r--r-- root/root 262081 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/three_track_cl2a.png -rw-r--r-- root/root 58209 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/images/three_track_simple.png drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/install/ -rw-r--r-- root/root 40253 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/install/Installation.html -rw-r--r-- root/root 148193 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/install/Installation.pdf.gz -rw-r--r-- root/root 10332 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Doc/install/Installation.tex.gz -rw-r--r-- root/root 9704 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Doc/install/Installation.txt.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/ -rw-r--r-- root/root 582 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/.coveragerc -rw-r--r-- root/root 2848 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/.flake8 drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Abi/ -rw-r--r-- root/root 88721 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1.gz -rw-r--r-- root/root 107223 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1.gz -rw-r--r-- root/root 137756 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1.gz -rw-r--r-- root/root 142685 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1.gz -rw-r--r-- root/root 132727 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1.gz -rw-r--r-- root/root 26 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/fake.ab1 -rw-r--r-- root/root 98979 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1.gz -rw-r--r-- root/root 28649 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa.gz -rw-r--r-- root/root 2400 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Abi/test_data.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Ace/ -rw-r--r-- root/root 4443 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace.gz -rw-r--r-- root/root 7280 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace.gz -rw-r--r-- root/root 2231 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Affy/ -rw-r--r-- root/root 1716 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Affy/affy_v3_example.CEL -rw-r--r-- root/root 1079 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Affy/affy_v4_example.CEL drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/BWA/ -rw-r--r-- root/root 9109 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_1_truncated.fastq.gz -rw-r--r-- root/root 9300 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_2_truncated.fastq.gz -rw-r--r-- root/root 54629 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BWA/human_g1k_v37_truncated.fasta.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/BioSQL/ -rw-r--r-- root/root 7280 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-mysql.sql.gz -rw-r--r-- root/root 9198 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-pg.sql.gz -rw-r--r-- root/root 2856 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-sqlite.sql.gz -rw-r--r-- root/root 19165 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/BioSQL/cor6_6.db.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Blast/ -rw-r--r-- root/root 1308 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/README.txt.gz -rw-r--r-- root/root 28066 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Blast/html_msgid_29_blastx_001.html -rw-r--r-- root/root 4879 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/mirna.tab.gz -rw-r--r-- root/root 18813 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/mirna.xml.gz -rw-r--r-- root/root 1108 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_001.txt -rw-r--r-- root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_002.txt -rw-r--r-- root/root 305 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_003.txt -rw-r--r-- root/root 803 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_004.txt -rw-r--r-- root/root 1789 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_005.txt -rw-r--r-- root/root 97 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_006.txt -rw-r--r-- root/root 646 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_007.txt -rw-r--r-- root/root 1087 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_008.txt -rw-r--r-- root/root 641 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_009.txt -rw-r--r-- root/root 1274 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_010.txt -rw-r--r-- root/root 1857 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_011.txt.gz -rw-r--r-- root/root 1815 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_012.txt -rw-r--r-- root/root 633 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_013.txt -rw-r--r-- root/root 944 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastn_001.txt -rw-r--r-- root/root 28755 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastx_001.txt.gz -rw-r--r-- root/root 1380 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_001.txt.gz -rw-r--r-- root/root 3008 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_002.txt -rw-r--r-- root/root 1725 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_003.txt.gz -rw-r--r-- root/root 2794 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastn_004.txt -rw-r--r-- root/root 3677 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_001.txt -rw-r--r-- root/root 1556 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_002.txt -rw-r--r-- root/root 4713 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_003.txt.gz -rw-r--r-- root/root 2079 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_004.txt.gz -rw-r--r-- root/root 2165 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_005.txt -rw-r--r-- root/root 3129 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_006.txt.gz -rw-r--r-- root/root 2333 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastp_007.txt.gz -rw-r--r-- root/root 1954 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastx_001.txt.gz -rw-r--r-- root/root 1658 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_blastx_002.txt -rw-r--r-- root/root 1744 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_001.txt.gz -rw-r--r-- root/root 12420 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_002.txt.gz -rw-r--r-- root/root 12009 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_phiblast_003.txt.gz -rw-r--r-- root/root 2367 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastn_001.txt.gz -rw-r--r-- root/root 1661 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastn_002.txt -rw-r--r-- root/root 5423 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2010L_tblastx_001.txt.gz -rw-r--r-- root/root 2498 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_001.txt.gz -rw-r--r-- root/root 3009 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_002.txt -rw-r--r-- root/root 3628 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_003.txt.gz -rw-r--r-- root/root 2794 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastn_004.txt -rw-r--r-- root/root 2942 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_001.txt -rw-r--r-- root/root 1560 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_002.txt -rw-r--r-- root/root 4713 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_003.txt.gz -rw-r--r-- root/root 2079 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_004.txt.gz -rw-r--r-- root/root 2171 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_005.txt -rw-r--r-- root/root 3131 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_006.txt.gz -rw-r--r-- root/root 2330 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastp_007.txt.gz -rw-r--r-- root/root 1952 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastx_001.txt.gz -rw-r--r-- root/root 1657 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_blastx_002.txt -rw-r--r-- root/root 1887 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_001.txt.gz -rw-r--r-- root/root 12178 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_002.txt.gz -rw-r--r-- root/root 9814 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_phiblast_003.txt.gz -rw-r--r-- root/root 2364 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastn_001.txt.gz -rw-r--r-- root/root 1661 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastn_002.txt -rw-r--r-- root/root 5419 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2011L_tblastx_001.txt.gz -rw-r--r-- root/root 22759 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2012L_psiblast_001.txt.gz -rw-r--r-- root/root 2491 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_blastn_001.txt.gz -rw-r--r-- root/root 1719 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2014L_psiblast_001.txt.gz -rw-r--r-- root/root 1330 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2102L_blastn_001.txt -rw-r--r-- root/root 2314 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2201L_blastx_001.txt -rw-r--r-- root/root 829 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2202L_blastn_001.txt -rw-r--r-- root/root 692 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2202L_blastn_002.txt -rw-r--r-- root/root 6236 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2202L_blastp_001.txt.gz -rw-r--r-- root/root 2616 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2208L_psiblast_001.txt -rw-r--r-- root/root 1509 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2215L_blastx_001.txt -rw-r--r-- root/root 3068 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2216L_tblastn_001.txt.gz -rw-r--r-- root/root 2835 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_001.txt.gz -rw-r--r-- root/root 1471 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2220L_blastx_002.txt.gz -rw-r--r-- root/root 3560 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2221L_blastp_001.txt.gz -rw-r--r-- root/root 4712 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2222L_blastx_001.txt.gz -rw-r--r-- root/root 4388 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2222_blastx_001.txt.gz -rw-r--r-- root/root 755 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_001.txt -rw-r--r-- root/root 2877 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_002.txt.gz -rw-r--r-- root/root 1857 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_003.txt.gz -rw-r--r-- root/root 3143 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastn_004.txt.gz -rw-r--r-- root/root 1249 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_001.txt -rw-r--r-- root/root 2901 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_002.txt.gz -rw-r--r-- root/root 2329 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_003.txt.gz -rw-r--r-- root/root 2849 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastp_004.txt.gz -rw-r--r-- root/root 888 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_001.txt -rw-r--r-- root/root 2246 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_002.txt.gz -rw-r--r-- root/root 3305 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_003.txt.gz -rw-r--r-- root/root 2406 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_blastx_004.txt.gz -rw-r--r-- root/root 891 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_001.txt -rw-r--r-- root/root 3526 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_002.txt -rw-r--r-- root/root 2871 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_003.txt.gz -rw-r--r-- root/root 2629 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastn_004.txt.gz -rw-r--r-- root/root 849 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_001.txt -rw-r--r-- root/root 2408 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_002.txt.gz -rw-r--r-- root/root 4104 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_003.txt.gz -rw-r--r-- root/root 4577 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2226_tblastx_004.txt.gz -rw-r--r-- root/root 4594 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/text_2230_blastp_001.txt.gz -rw-r--r-- root/root 41938 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.bgz.gz -rw-r--r-- root/root 29608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.gz -rw-r--r-- root/root 1256 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastn_001.xml.gz -rw-r--r-- root/root 36788 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastp_001.xml.gz -rw-r--r-- root/root 14723 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastx_001.xml.gz -rw-r--r-- root/root 38109 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastn_001.xml.gz -rw-r--r-- root/root 5915 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastx_001.xml.gz -rw-r--r-- root/root 1831 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_blastp_001.xml -rw-r--r-- root/root 7745 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_rpsblast_001.xml.gz -rw-r--r-- root/root 2858 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_001.xml.gz -rw-r--r-- root/root 2954 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_002.xml -rw-r--r-- root/root 7929 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastp_001.xml.gz -rw-r--r-- root/root 10981 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastx_001.xml.gz -rw-r--r-- root/root 2996 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_001.xml.gz -rw-r--r-- root/root 1983 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_002.xml -rw-r--r-- root/root 2213 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_003.xml.gz -rw-r--r-- root/root 1590 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_004.xml.gz -rw-r--r-- root/root 3027 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_005.xml.gz -rw-r--r-- root/root 1187 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_006.xml.gz -rw-r--r-- root/root 3062 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_001.xml.gz -rw-r--r-- root/root 2029 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_002.xml -rw-r--r-- root/root 1947 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_003.xml.gz -rw-r--r-- root/root 1964 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_004.xml.gz -rw-r--r-- root/root 3010 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_005.xml.gz -rw-r--r-- root/root 2750 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_001.xml.gz -rw-r--r-- root/root 1979 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_002.xml -rw-r--r-- root/root 2676 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_003.xml.gz -rw-r--r-- root/root 2564 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_004.xml.gz -rw-r--r-- root/root 2956 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_001.xml.gz -rw-r--r-- root/root 1980 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_002.xml -rw-r--r-- root/root 1536 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_003.xml.gz -rw-r--r-- root/root 2187 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_004.xml.gz -rw-r--r-- root/root 2936 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_005.xml.gz -rw-r--r-- root/root 5611 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_001.xml.gz -rw-r--r-- root/root 1982 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_002.xml -rw-r--r-- root/root 5426 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_003.xml.gz -rw-r--r-- root/root 4314 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_004.xml.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/ -rw-r--r-- root/root 1065 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/README.txt -rw-r--r-- root/root 828 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/mirna.pslx -rw-r--r-- root/root 2451 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.psl -rw-r--r-- root/root 427 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_002.psl -rw-r--r-- root/root 693 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.psl -rw-r--r-- root/root 2185 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.psl -rw-r--r-- root/root 2024 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.psl -rw-r--r-- root/root 1257 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_001.psl -rw-r--r-- root/root 841 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_002.psl -rw-r--r-- root/root 4087 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_001.pslx -rw-r--r-- root/root 427 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_002.pslx -rw-r--r-- root/root 837 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_003.pslx -rw-r--r-- root/root 3677 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_004.pslx -rw-r--r-- root/root 3660 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_005.pslx -rw-r--r-- root/root 2173 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Blat/pslx_35_002.pslx drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/CDAO/ -rw-r--r-- root/root 4529 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/CDAO/test.cdao.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cellosaurus/ -rw-r--r-- root/root 377 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_1.txt -rw-r--r-- root/root 1507 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_2.txt -rw-r--r-- root/root 190 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_3.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/ -rw-r--r-- root/root 3401 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/cw02.aln -rw-r--r-- root/root 1524 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/hedgehog.aln.gz -rw-r--r-- root/root 2972 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/odd_consensus.aln -rw-r--r-- root/root 2482 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/opuntia.aln -rw-r--r-- root/root 1748 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/promals3d.aln.gz -rw-r--r-- root/root 1994 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Clustalw/protein.aln.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Cluster/ -rw-r--r-- root/root 750 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cluster/README -rw-r--r-- root/root 3110 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Cluster/cyano.txt.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/CodonUsage/ -rw-r--r-- root/root 27698 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/CodonUsage/HighlyExpressedGenes.txt.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Compass/ -rw-r--r-- root/root 1803 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Compass/comtest1 -rw-r--r-- root/root 1497 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Compass/comtest2 drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/EMBL/ -rw-r--r-- root/root 501 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/101ma_no_coords.embl -rw-r--r-- root/root 1054 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/A04195.imgt -rw-r--r-- root/root 1838 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/AAA03323.embl.gz -rw-r--r-- root/root 9206 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/AE017046.embl.gz -rw-r--r-- root/root 2736 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/DD231055_edited.embl -rw-r--r-- root/root 2722 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/DD231055_edited2.embl -rw-r--r-- root/root 3640 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/DS830848.embl -rw-r--r-- root/root 9821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/Human_contigs.embl.gz -rw-r--r-- root/root 1883 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/RepBase23.02.embl -rw-r--r-- root/root 4799 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/SC10H5.embl.gz -rw-r--r-- root/root 2358 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/TRBG361.embl.gz -rw-r--r-- root/root 6338 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/U87107.embl.gz -rw-r--r-- root/root 2736 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/embl_with_0_line.embl -rw-r--r-- root/root 2586 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/epo_prt_selection.embl.gz -rw-r--r-- root/root 9157 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/hla_3260_sample.imgt.gz -rw-r--r-- root/root 4320 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/kipo_prt_sample.embl.gz -rw-r--r-- root/root 462 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/location_wrap.embl -rw-r--r-- root/root 2074 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/patents.embl -rw-r--r-- root/root 448 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/EMBL/xx_after_co.embl drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Emboss/ -rw-r--r-- root/root 1233 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/NirK.primer3.gz -rw-r--r-- root/root 5052 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/NirK_full.primer3.gz -rw-r--r-- root/root 1670 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/alignret.txt -rw-r--r-- root/root 923 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/bac_find.primer3 -rw-r--r-- root/root 321 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/bac_find.psearch -rw-r--r-- root/root 452 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/cds_forward.primer3 -rw-r--r-- root/root 168 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/cds_reverse.primer3 -rw-r--r-- root/root 2123 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/emboss_pair_aln_full_blank_line.txt.gz -rw-r--r-- root/root 456 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/internal_oligo.primer3 -rw-r--r-- root/root 3222 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/matcher_pair.txt -rw-r--r-- root/root 893 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/matcher_simple.txt -rw-r--r-- root/root 1526 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/needle.txt.gz -rw-r--r-- root/root 3988 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/needle_asis.txt.gz -rw-r--r-- root/root 1020 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/no_oligo.primer3.gz -rw-r--r-- root/root 95 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/short.primer3 -rw-r--r-- root/root 1214 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/water.txt -rw-r--r-- root/root 989 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Emboss/water2.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Entrez/ -rw-r--r-- root/root 1643 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/efetch_schemas.xml -rw-r--r-- root/root 810 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/egquery1.xml.gz -rw-r--r-- root/root 895 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/egquery2.xml.gz -rw-r--r-- root/root 1165 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/einfo1.xml -rw-r--r-- root/root 2817 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/einfo2.xml.gz -rw-r--r-- root/root 5840 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/einfo3.xml.gz -rw-r--r-- root/root 473 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/einfo4.xml -rw-r--r-- root/root 1274 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink1.xml.gz -rw-r--r-- root/root 1210 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink2.xml -rw-r--r-- root/root 2068 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink3.xml.gz -rw-r--r-- root/root 1375 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink4.xml.gz -rw-r--r-- root/root 967 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink5.xml -rw-r--r-- root/root 3372 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink6.xml -rw-r--r-- root/root 812 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink7.xml.gz -rw-r--r-- root/root 312 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/elink8.xml -rw-r--r-- root/root 314 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/epost1.xml -rw-r--r-- root/root 218 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/epost2.xml -rw-r--r-- root/root 363 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/epost3.xml -rw-r--r-- root/root 672 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch1.xml -rw-r--r-- root/root 3786 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch2.xml -rw-r--r-- root/root 997 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch3.xml -rw-r--r-- root/root 880 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch4.xml -rw-r--r-- root/root 2575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch5.xml -rw-r--r-- root/root 727 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch6.xml -rw-r--r-- root/root 649 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch7.xml -rw-r--r-- root/root 506 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esearch8.xml -rw-r--r-- root/root 363 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/espell.xml -rw-r--r-- root/root 3791 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary1.xml -rw-r--r-- root/root 3943 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary2.xml -rw-r--r-- root/root 1609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary3.xml -rw-r--r-- root/root 1666 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary4.xml -rw-r--r-- root/root 2261 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary5.xml -rw-r--r-- root/root 1603 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary6.xml -rw-r--r-- root/root 1206 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary7.xml -rw-r--r-- root/root 258 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/esummary8.xml -rw-r--r-- root/root 1529 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/journals.xml.gz -rw-r--r-- root/root 2375 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/ncbi_mim.xml.gz -rw-r--r-- root/root 2169 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide1.xml.gz -rw-r--r-- root/root 2273 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide2.xml -rw-r--r-- root/root 1487 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/protein.xml.gz -rw-r--r-- root/root 2297 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed1.xml.gz -rw-r--r-- root/root 3220 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed2.xml.gz -rw-r--r-- root/root 3792 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed3.html -rw-r--r-- root/root 5650 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed4.xml.gz -rw-r--r-- root/root 4185 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed5.xml.gz -rw-r--r-- root/root 4085 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed6.xml.gz -rw-r--r-- root/root 1005 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Entrez/taxonomy.xml.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Enzymes/ -rw-r--r-- root/root 147 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Enzymes/lactate.txt -rw-r--r-- root/root 615 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Enzymes/lipoprotein.txt -rw-r--r-- root/root 277 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Enzymes/proline.txt -rw-r--r-- root/root 180 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Enzymes/valine.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/ -rw-r--r-- root/root 1847 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/README.txt -rw-r--r-- root/root 2557 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local.exn.gz -rw-r--r-- root/root 3236 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome.exn.gz -rw-r--r-- root/root 3868 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding.exn.gz -rw-r--r-- root/root 2869 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -rw-r--r-- root/root 3868 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome.exn.gz -rw-r--r-- root/root 776 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_dna2protein.exn -rw-r--r-- root/root 2476 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome.exn.gz -rw-r--r-- root/root 2655 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_genome2genome.exn.gz -rw-r--r-- root/root 3176 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner.exn.gz -rw-r--r-- root/root 2795 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna.exn.gz -rw-r--r-- root/root 2998 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -rw-r--r-- root/root 3025 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome.exn.gz -rw-r--r-- root/root 1633 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped.exn.gz -rw-r--r-- root/root 4607 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans.exn.gz -rw-r--r-- root/root 1508 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar.exn -rw-r--r-- root/root 2394 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -rw-r--r-- root/root 454 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -rw-r--r-- root/root 384 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -rw-r--r-- root/root 6010 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple.exn.gz -rw-r--r-- root/root 2497 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -rw-r--r-- root/root 205 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_none.exn drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip/ -rw-r--r-- root/root 2929 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip/primates.phyx.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/FSSP/ -rw-r--r-- root/root 190702 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/FSSP/1cnv.fssp.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Fasta/ -rw-r--r-- root/root 2507 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/README -rw-r--r-- root/root 145 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/aster.pro -rw-r--r-- root/root 145 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/aster_no_wrap.pro -rw-r--r-- root/root 1135 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/centaurea.nu -rw-r--r-- root/root 129 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/dups.fasta -rw-r--r-- root/root 2204 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/elderberry.nu -rw-r--r-- root/root 179 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/f001 -rw-r--r-- root/root 1742 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/f002 -rw-r--r-- root/root 392 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/f003 -rw-r--r-- root/root 809 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/fa01 -rw-r--r-- root/root 683 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/lavender.nu -rw-r--r-- root/root 401 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/loveliesbleeding.pro -rw-r--r-- root/root 922 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/lupine.nu -rw-r--r-- root/root 2462 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output001.m10.gz -rw-r--r-- root/root 4862 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output002.m10.gz -rw-r--r-- root/root 1865 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output003.m10.gz -rw-r--r-- root/root 3919 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output004.m10 -rw-r--r-- root/root 3914 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output005.m10 -rw-r--r-- root/root 2816 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output006.m10 -rw-r--r-- root/root 3967 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output007.m10.gz -rw-r--r-- root/root 4415 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output008.m10.gz -rw-r--r-- root/root 2083 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output009.m10.gz -rw-r--r-- root/root 982 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output010.m10 -rw-r--r-- root/root 1567 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output011.m10.gz -rw-r--r-- root/root 2138 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output012.m10.gz -rw-r--r-- root/root 2271 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output013.m10.gz -rw-r--r-- root/root 975 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output014.m10 -rw-r--r-- root/root 3366 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output015.m10 -rw-r--r-- root/root 5070 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/output016.m10.gz -rw-r--r-- root/root 801 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/phlox.nu -rw-r--r-- root/root 701 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/rose.pro -rw-r--r-- root/root 535 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/rosemary.pro -rw-r--r-- root/root 412 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/sweetpea.nu -rw-r--r-- root/root 2771 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Fasta/wisteria.nu drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/GFF/ -rw-r--r-- root/root 8072 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GFF/NC_001422.gbk.gz -rw-r--r-- root/root 3114 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802.fna.gz -rw-r--r-- root/root 3101 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802lc.fna.gz -rw-r--r-- root/root 3114 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802x.fna.gz -rw-r--r-- root/root 84 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GFF/multi.fna drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/GenBank/ -rw-r--r-- root/root 1767 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/1MRR_A.gp.gz -rw-r--r-- root/root 3973 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/DS830848.gb -rw-r--r-- root/root 2267 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978.gbk.gz -rw-r--r-- root/root 2262 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978_output.gbk.gz -rw-r--r-- root/root 1960 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502.gbk.gz -rw-r--r-- root/root 1956 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502_output.gbk.gz -rw-r--r-- root/root 2106 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485.gbk.gz -rw-r--r-- root/root 2104 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485_output.gbk.gz -rw-r--r-- root/root 15564 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.faa.gz -rw-r--r-- root/root 92273 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.bgz.gz -rw-r--r-- root/root 87949 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.gz -rw-r--r-- root/root 2981 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.faa -rw-r--r-- root/root 2386 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.ffn.gz -rw-r--r-- root/root 3351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.fna.gz -rw-r--r-- root/root 9926 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.gb.gz -rw-r--r-- root/root 2228 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.tsv -rw-r--r-- root/root 2996 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NP_416719.gbwithparts.gz -rw-r--r-- root/root 3394 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/NT_019265.gb -rw-r--r-- root/root 45090 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/arab1.gb.gz -rw-r--r-- root/root 3680 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/bad_loc_wrap.gb.gz -rw-r--r-- root/root 1748 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap.gb -rw-r--r-- root/root 1292 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap_CDS.gb -rw-r--r-- root/root 1746 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap_linear.gb -rw-r--r-- root/root 3721 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/blank_seq.gb -rw-r--r-- root/root 4401 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.bgz.gz -rw-r--r-- root/root 4302 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.gz -rw-r--r-- root/root 2387 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/dbsource_wrap.gb -rw-r--r-- root/root 3231 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/empty_accession.gbk.gz -rw-r--r-- root/root 3302 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/empty_feature_qualifier.gb.gz -rw-r--r-- root/root 3230 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/empty_version.gbk.gz -rw-r--r-- root/root 77506 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/extra_keywords.gb.gz -rw-r--r-- root/root 3887 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/gbvrl1_start.seq.gz -rw-r--r-- root/root 3253 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_locus_line_spacing.gb.gz -rw-r--r-- root/root 3298 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_misc_feature.gb.gz -rw-r--r-- root/root 3339 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_product.gb.gz -rw-r--r-- root/root 2138 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/iro.gb.gz -rw-r--r-- root/root 3541 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/negative_location.gb.gz -rw-r--r-- root/root 3250 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/no_end_marker.gb.gz -rw-r--r-- root/root 649 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/no_origin_no_end.gb -rw-r--r-- root/root 1985 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/noref.gb.gz -rw-r--r-- root/root 2955 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/one_of.gb.gz -rw-r--r-- root/root 1908 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/origin_line.gb -rw-r--r-- root/root 3131 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/pBAD30.gb.gz -rw-r--r-- root/root 2799 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/pri1.gb -rw-r--r-- root/root 2157 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq.gb -rw-r--r-- root/root 3107 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq2.gb.gz -rw-r--r-- root/root 1988 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/qualifier_escaping_read.gb -rw-r--r-- root/root 1568 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/qualifier_escaping_write.gb -rw-r--r-- root/root 3273 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/GenBank/wrong_sequence_indent.gb.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Geo/ -rw-r--r-- root/root 2894 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/GSE16.txt -rw-r--r-- root/root 2931 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/GSM645.txt -rw-r--r-- root/root 2655 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/GSM691.txt -rw-r--r-- root/root 2834 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/GSM700.txt -rw-r--r-- root/root 2894 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/GSM804.txt -rw-r--r-- root/root 2497 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy.txt.gz -rw-r--r-- root/root 1795 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy_chp.txt.gz -rw-r--r-- root/root 3831 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_dual.txt.gz -rw-r--r-- root/root 6667 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_family.txt.gz -rw-r--r-- root/root 2559 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_platform.txt.gz -rw-r--r-- root/root 1760 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_series.txt drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Graphics/ -rw-r--r-- root/root 97 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Graphics/README drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/ -rw-r--r-- root/root 3378 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/README.txt -rw-r--r-- root/root 3354 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_001.out -rw-r--r-- root/root 582 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_002.out -rw-r--r-- root/root 798 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_003.out -rw-r--r-- root/root 988 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_004.out -rw-r--r-- root/root 836 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmsearch_001.out.gz -rw-r--r-- root/root 1389 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmscan_001.out.gz -rw-r--r-- root/root 3229 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -rw-r--r-- root/root 2230 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_001.out -rw-r--r-- root/root 476 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_002.out -rw-r--r-- root/root 655 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_003.out -rw-r--r-- root/root 808 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_004.out -rw-r--r-- root/root 2974 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_31b1_hmmscan_001.out -rw-r--r-- root/root 1950 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_31b1_hmmsearch_001.out -rw-r--r-- root/root 32399 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_20_hmmsearch_001.out.gz -rw-r--r-- root/root 1977 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_21_hmmpfam_001.out -rw-r--r-- root/root 2471 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmpfam_001.out -rw-r--r-- root/root 2658 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmsearch_001.out.gz -rw-r--r-- root/root 10329 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_001.out.gz -rw-r--r-- root/root 1573 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_002.out -rw-r--r-- root/root 1470 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_003.out -rw-r--r-- root/root 1273 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_004.out.gz -rw-r--r-- root/root 7595 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_24_hmmpfam_001.out.gz -rw-r--r-- root/root 4816 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_001.out.gz -rw-r--r-- root/root 1936 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_002.out -rw-r--r-- root/root 3298 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_003.out -rw-r--r-- root/root 4065 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_004.out -rw-r--r-- root/root 2063 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_005.out.gz -rw-r--r-- root/root 2231 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_006.out.gz -rw-r--r-- root/root 1411 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_007.out.gz -rw-r--r-- root/root 2035 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_008.out.gz -rw-r--r-- root/root 3199 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_009.out.gz -rw-r--r-- root/root 49591 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_010.out.gz -rw-r--r-- root/root 2009 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_001.out -rw-r--r-- root/root 4853 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_002.out.gz -rw-r--r-- root/root 1619 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_003.out.gz -rw-r--r-- root/root 4140 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_004.out.gz -rw-r--r-- root/root 5229 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_005.out.gz -rw-r--r-- root/root 5264 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmscan_001.out.gz -rw-r--r-- root/root 4182 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmsearch_001.out.gz -rw-r--r-- root/root 22593 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmscan_001.out.gz -rw-r--r-- root/root 3463 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_001.out.gz -rw-r--r-- root/root 3597 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_002.out.gz -rw-r--r-- root/root 6894 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_phmmer_001.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/ -rw-r--r-- root/root 2811 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/TAT_mase_nuc.txt.gz -rw-r--r-- root/root 2008 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/VIF_mase-pro.txt.gz -rw-r--r-- root/root 3529 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/vpu_nucaligned.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/InterProScan/ -rw-r--r-- root/root 3470 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/InterProScan/test_001.xml.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/KEGG/ -rw-r--r-- root/root 2722 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/compound.irregular -rw-r--r-- root/root 4338 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/compound.sample.gz -rw-r--r-- root/root 45254 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.4letter.gz -rw-r--r-- root/root 2492 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.irregular -rw-r--r-- root/root 3931 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.new -rw-r--r-- root/root 298245 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.sample.gz -rw-r--r-- root/root 3860 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/gene.sample -rw-r--r-- root/root 5199 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/ko00010.xml.gz -rw-r--r-- root/root 1969 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/ko00253.xml.gz -rw-r--r-- root/root 158609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/ko01100.xml.gz -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/ko03070.xml.gz -rw-r--r-- root/root 1115 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/map00950.rea.gz -rw-r--r-- root/root 631521 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png -rw-r--r-- root/root 53180 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/MAF/ -rw-r--r-- root/root 1138 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/bug2453.maf -rw-r--r-- root/root 733 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/bundle_without_target.maf -rw-r--r-- root/root 3615 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/cnksr3.fa -rw-r--r-- root/root 1614 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/corrupt.idx.gz -rw-r--r-- root/root 7701 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/humor.maf.gz -rw-r--r-- root/root 33 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/invalid.idx -rw-r--r-- root/root 1406 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/length_coords_mismatch.maf -rw-r--r-- root/root 17122 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.maf.gz -rw-r--r-- root/root 1649 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.mafindex.gz -rw-r--r-- root/root 17125 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.maf.gz -rw-r--r-- root/root 1653 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.mafindex.gz -rw-r--r-- root/root 605948 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.maf.gz -rw-r--r-- root/root 23896 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.mafindex.gz -rw-r--r-- root/root 1285 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_test.maf -rw-r--r-- root/root 456 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/unfinished.idx.gz -rw-r--r-- root/root 1618 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MAF/wrong_version.idx.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Mauve/ -rw-r--r-- root/root 6744 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Mauve/simple.fa.gz -rw-r--r-- root/root 159 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.backbone -rw-r--r-- root/root 42 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.bbcols -rw-r--r-- root/root 6253 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Medline/ -rw-r--r-- root/root 1218 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result1.txt -rw-r--r-- root/root 3655 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result2.txt.gz -rw-r--r-- root/root 3469 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result3.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/ -rw-r--r-- root/root 2888 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta3.out -rw-r--r-- root/root 1344 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta4.out.gz -rw-r--r-- root/root 1217 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta6.out.gz -rw-r--r-- root/root 1232 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta7.out.gz -rw-r--r-- root/root 1110 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta8.out.gz -rw-r--r-- root/root 2459 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/meta.out.gz -rw-r--r-- root/root 1775 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/meta2.out.gz -rw-r--r-- root/root 2815 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/MetaTool/meta9.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Motif/ -rw-r--r-- root/root 607 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/Arnt.sites -rw-r--r-- root/root 141 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/REB1.pfm -rw-r--r-- root/root 144 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/SRF.pfm -rw-r--r-- root/root 2642 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/alignace.out.gz -rw-r--r-- root/root 3351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/mast.dna.oops.txt.gz -rw-r--r-- root/root 9879 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.oops.txt.gz -rw-r--r-- root/root 4696 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/mast.protein.tcm.txt.gz -rw-r--r-- root/root 3082 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/meme.dna.oops.txt.gz -rw-r--r-- root/root 2281 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/meme.out.gz -rw-r--r-- root/root 11638 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.oops.txt.gz -rw-r--r-- root/root 8017 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/meme.protein.tcm.txt.gz -rw-r--r-- root/root 961 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Motif/transfac.dat drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/NBRF/ -rw-r--r-- root/root 22272 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NBRF/B_nuc.pir.gz -rw-r--r-- root/root 3665 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NBRF/Cw_prot.pir.gz -rw-r--r-- root/root 2428 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NBRF/DMA_nuc.pir -rw-r--r-- root/root 1435 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NBRF/DMB_prot.pir -rw-r--r-- root/root 1148 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NBRF/clustalw.pir.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/NeXML/ -rw-r--r-- root/root 3926 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/characters.xml.gz -rw-r--r-- root/root 1423 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/edgelabels.xml -rw-r--r-- root/root 2103 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/meta_taxa.xml -rw-r--r-- root/root 1717 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/meta_types.xml -rw-r--r-- root/root 329 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/nexml.xml -rw-r--r-- root/root 1989 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/phenoscape.xml -rw-r--r-- root/root 1326 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/sets.xml -rw-r--r-- root/root 3162 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/taxa.xml -rw-r--r-- root/root 1694 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/timetree.xml.gz -rw-r--r-- root/root 3547 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/tolweb.xml -rw-r--r-- root/root 11133 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/treebase-record.xml.gz -rw-r--r-- root/root 1451 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/trees-uris.xml -rw-r--r-- root/root 1460 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeXML/trees.xml.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeuralNetwork/ -rw-r--r-- root/root 1275 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeuralNetwork/enolase.fasta -rw-r--r-- root/root 731 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/NeuralNetwork/repeat.fasta drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Nexus/ -rw-r--r-- root/root 19 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/ByteOrderMarkFile.nwk -rw-r--r-- root/root 15033 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/bats.nex.gz -rw-r--r-- root/root 578 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/codonposset.nex -rw-r--r-- root/root 1027 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/int_node_labels.nwk -rw-r--r-- root/root 817 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/test.new -rw-r--r-- root/root 3592 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/test_Nexus_input.nex -rw-r--r-- root/root 3841 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -rw-r--r-- root/root 4194 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex.gz -rw-r--r-- root/root 4578 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/ -rw-r--r-- root/root 531 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/aa_alignment.phylip -rw-r--r-- root/root 1579 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/alignment.phylip -rw-r--r-- root/root 3616 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/longnames.fasta -rw-r--r-- root/root 2539 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/lysinYangSwanson2002.nuc.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/ -rw-r--r-- root/root 85 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/README.txt -rw-r--r-- root/root 25 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad1.ctl -rw-r--r-- root/root 32 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad2.ctl -rw-r--r-- root/root 14 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad3.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml.ctl drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/ -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/SE.ctl -rw-r--r-- root/root 1771 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/baseml.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model0.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model1.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model2.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model3.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model4.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model5.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model6.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model7.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model8.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo1.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo3.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo4.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK1.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK2.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK3.ctl -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK4.ctl drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ -rw-r--r-- root/root 371 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/NSsite3.ctl -rw-r--r-- root/root 350 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/SE.ctl -rw-r--r-- root/root 360 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/aa_model0.ctl -rw-r--r-- root/root 363 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -rw-r--r-- root/root 355 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/all_NSsites.ctl -rw-r--r-- root/root 359 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/branchsiteA.ctl -rw-r--r-- root/root 359 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/clademodelC.ctl -rw-r--r-- root/root 349 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/codeml.ctl -rw-r--r-- root/root 358 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/freeratio.ctl -rw-r--r-- root/root 346 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/m2a_rel.ctl -rw-r--r-- root/root 1576 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -rw-r--r-- root/root 1603 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -rw-r--r-- root/root 1575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -rw-r--r-- root/root 357 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/pairwise.ctl -rw-r--r-- root/root 84 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/species.tree -rw-r--r-- root/root 711 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00.ctl drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/ -rw-r--r-- root/root 717 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00.ctl -rw-r--r-- root/root 785 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00_long.ctl drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/ -rw-r--r-- root/root 149 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/bad_results.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/ drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/ -rw-r--r-- root/root 1916 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_1.out -rw-r--r-- root/root 1957 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_3.out -rw-r--r-- root/root 1933 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_4.out -rw-r--r-- root/root 1941 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_4c.out -rw-r--r-- root/root 1936 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_5.out -rw-r--r-- root/root 1926 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_6.out -rw-r--r-- root/root 1950 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_7.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/ -rw-r--r-- root/root 2144 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -rw-r--r-- root/root 2138 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -rw-r--r-- root/root 2152 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -rw-r--r-- root/root 2348 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/baseml_SE.out -rw-r--r-- root/root 1088 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/baseml_alpha1rho1.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/ -rw-r--r-- root/root 1870 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_1.out -rw-r--r-- root/root 1863 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_3.out -rw-r--r-- root/root 1904 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_4.out -rw-r--r-- root/root 1904 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_4c.out -rw-r--r-- root/root 1731 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_5.out -rw-r--r-- root/root 1844 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_6.out -rw-r--r-- root/root 1838 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_7.out -rw-r--r-- root/root 1781 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_1.out -rw-r--r-- root/root 1774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_3.out -rw-r--r-- root/root 1800 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_4.out -rw-r--r-- root/root 1800 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_4c.out -rw-r--r-- root/root 1757 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_5.out -rw-r--r-- root/root 1775 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_6.out -rw-r--r-- root/root 1789 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_7.out -rw-r--r-- root/root 1577 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_1.out -rw-r--r-- root/root 1570 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_3.out -rw-r--r-- root/root 1576 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_4.out -rw-r--r-- root/root 1576 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_4c.out -rw-r--r-- root/root 1553 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_5.out -rw-r--r-- root/root 1571 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_6.out -rw-r--r-- root/root 1565 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_7.out -rw-r--r-- root/root 1775 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_1.out -rw-r--r-- root/root 1768 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_3.out -rw-r--r-- root/root 1774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_4.out -rw-r--r-- root/root 1774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_4c.out -rw-r--r-- root/root 1751 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_5.out -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_6.out -rw-r--r-- root/root 1783 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_7.out -rw-r--r-- root/root 1785 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_1.out -rw-r--r-- root/root 1778 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_3.out -rw-r--r-- root/root 1804 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_4.out -rw-r--r-- root/root 1804 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_4c.out -rw-r--r-- root/root 1761 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_5.out -rw-r--r-- root/root 1779 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_6.out -rw-r--r-- root/root 1773 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_7.out -rw-r--r-- root/root 1781 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_1.out -rw-r--r-- root/root 1774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_3.out -rw-r--r-- root/root 1800 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_4.out -rw-r--r-- root/root 1780 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_4c.out -rw-r--r-- root/root 1757 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_5.out -rw-r--r-- root/root 1775 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_6.out -rw-r--r-- root/root 1769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_7.out -rw-r--r-- root/root 1821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_1.out -rw-r--r-- root/root 1815 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_3.out -rw-r--r-- root/root 1821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_4.out -rw-r--r-- root/root 1821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_4c.out -rw-r--r-- root/root 1798 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_5.out -rw-r--r-- root/root 1796 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_6.out -rw-r--r-- root/root 1790 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_7.out -rw-r--r-- root/root 2180 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_1.out -rw-r--r-- root/root 2156 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_3.out -rw-r--r-- root/root 2182 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_4.out -rw-r--r-- root/root 2182 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_4c.out -rw-r--r-- root/root 2159 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_5.out -rw-r--r-- root/root 2177 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_6.out -rw-r--r-- root/root 2151 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_7.out -rw-r--r-- root/root 2319 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_1.out -rw-r--r-- root/root 2296 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_3.out -rw-r--r-- root/root 2316 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_4.out -rw-r--r-- root/root 2322 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_4c.out -rw-r--r-- root/root 2279 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_5.out -rw-r--r-- root/root 2311 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_6.out -rw-r--r-- root/root 2291 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_7.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/ -rw-r--r-- root/root 1667 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -rw-r--r-- root/root 1652 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -rw-r--r-- root/root 1658 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -rw-r--r-- root/root 1658 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -rw-r--r-- root/root 1635 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -rw-r--r-- root/root 1653 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -rw-r--r-- root/root 1647 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -rw-r--r-- root/root 2575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -rw-r--r-- root/root 2567 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -rw-r--r-- root/root 2573 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -rw-r--r-- root/root 2573 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -rw-r--r-- root/root 2553 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -rw-r--r-- root/root 2571 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -rw-r--r-- root/root 2562 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -rw-r--r-- root/root 2606 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -rw-r--r-- root/root 2595 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -rw-r--r-- root/root 2600 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -rw-r--r-- root/root 2600 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -rw-r--r-- root/root 2578 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -rw-r--r-- root/root 2595 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -rw-r--r-- root/root 2592 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/ -rw-r--r-- root/root 1834 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -rw-r--r-- root/root 1828 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -rw-r--r-- root/root 1822 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -rw-r--r-- root/root 1850 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -rw-r--r-- root/root 1864 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -rw-r--r-- root/root 1858 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -rw-r--r-- root/root 2258 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -rw-r--r-- root/root 2252 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -rw-r--r-- root/root 2246 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -rw-r--r-- root/root 2294 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -rw-r--r-- root/root 2288 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -rw-r--r-- root/root 2262 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/ -rw-r--r-- root/root 2151 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml41.out -rw-r--r-- root/root 2148 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml43.out -rw-r--r-- root/root 2153 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml44.out -rw-r--r-- root/root 2173 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml44c.out drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/ -rw-r--r-- root/root 1760 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out.gz -rw-r--r-- root/root 1922 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out.gz -rw-r--r-- root/root 1919 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out.gz -rw-r--r-- root/root 1922 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out.gz -rw-r--r-- root/root 1916 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/ -rw-r--r-- root/root 1710 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_1.out.gz -rw-r--r-- root/root 1910 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_3.out.gz -rw-r--r-- root/root 1871 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4.out.gz -rw-r--r-- root/root 1875 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4c.out.gz -rw-r--r-- root/root 1860 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_5.out.gz -rw-r--r-- root/root 1899 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_6.out.gz -rw-r--r-- root/root 1868 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_7.out.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/ -rw-r--r-- root/root 2286 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -rw-r--r-- root/root 2499 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -rw-r--r-- root/root 2515 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -rw-r--r-- root/root 2515 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -rw-r--r-- root/root 2342 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -rw-r--r-- root/root 2537 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -rw-r--r-- root/root 2524 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/ -rw-r--r-- root/root 2183 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -rw-r--r-- root/root 2183 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -rw-r--r-- root/root 2199 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -rw-r--r-- root/root 2199 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -rw-r--r-- root/root 2026 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -rw-r--r-- root/root 2221 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -rw-r--r-- root/root 2222 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/ -rw-r--r-- root/root 2791 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out.gz -rw-r--r-- root/root 2972 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out.gz -rw-r--r-- root/root 2953 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out.gz -rw-r--r-- root/root 2931 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out.gz -rw-r--r-- root/root 2949 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out.gz -rw-r--r-- root/root 3002 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out.gz -rw-r--r-- root/root 2926 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/ -rw-r--r-- root/root 2002 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out.gz -rw-r--r-- root/root 2176 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out.gz -rw-r--r-- root/root 2164 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out.gz -rw-r--r-- root/root 2177 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out.gz -rw-r--r-- root/root 2174 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out.gz -rw-r--r-- root/root 2149 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out.gz -rw-r--r-- root/root 2168 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/ -rw-r--r-- root/root 2004 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out.gz -rw-r--r-- root/root 2184 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out.gz -rw-r--r-- root/root 2185 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out.gz -rw-r--r-- root/root 2197 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out.gz -rw-r--r-- root/root 2169 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out.gz -rw-r--r-- root/root 2171 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out.gz -rw-r--r-- root/root 2173 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/ -rw-r--r-- root/root 1895 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out.gz -rw-r--r-- root/root 2006 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out.gz -rw-r--r-- root/root 2011 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out.gz -rw-r--r-- root/root 2013 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out.gz -rw-r--r-- root/root 1984 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out.gz -rw-r--r-- root/root 1988 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out.gz -rw-r--r-- root/root 1975 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/ -rw-r--r-- root/root 1917 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out.gz -rw-r--r-- root/root 1918 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out.gz -rw-r--r-- root/root 1921 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out.gz -rw-r--r-- root/root 1911 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ -rw-r--r-- root/root 5742 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out.gz -rw-r--r-- root/root 8691 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out.gz -rw-r--r-- root/root 8694 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out.gz -rw-r--r-- root/root 8693 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out.gz -rw-r--r-- root/root 8676 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out.gz -rw-r--r-- root/root 8677 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out.gz -rw-r--r-- root/root 8675 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ -rw-r--r-- root/root 15557 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out.gz -rw-r--r-- root/root 12576 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out.gz -rw-r--r-- root/root 12296 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out.gz -rw-r--r-- root/root 12289 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ -rw-r--r-- root/root 5804 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out.gz -rw-r--r-- root/root 8753 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out.gz -rw-r--r-- root/root 8754 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out.gz -rw-r--r-- root/root 8751 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out.gz -rw-r--r-- root/root 8736 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out.gz -rw-r--r-- root/root 8756 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out.gz -rw-r--r-- root/root 8734 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/ -rw-r--r-- root/root 1695 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out.gz -rw-r--r-- root/root 1710 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out.gz -rw-r--r-- root/root 1692 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out.gz -rw-r--r-- root/root 1706 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out.gz -rw-r--r-- root/root 1679 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out.gz -rw-r--r-- root/root 1692 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out.gz -rw-r--r-- root/root 1688 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out.gz -rw-r--r-- root/root 7094 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/tree_regexp_versatility.out.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/ -rw-r--r-- root/root 2212 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_1.out.gz -rw-r--r-- root/root 2212 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_3.out.gz -rw-r--r-- root/root 2425 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4.out.gz -rw-r--r-- root/root 2425 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4c.out.gz -rw-r--r-- root/root 2382 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_5.out.gz -rw-r--r-- root/root 2383 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_6.out.gz -rw-r--r-- root/root 2383 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_7.out.gz -rw-r--r-- root/root 2396 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_8.out.gz -rw-r--r-- root/root 4130 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_long-4_8.out.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Trees/ -rw-r--r-- root/root 30 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Trees/bad.tree -rw-r--r-- root/root 1124 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Trees/lysin.trees -rw-r--r-- root/root 527 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Trees/lysin.trees.4.6 -rw-r--r-- root/root 84 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/Trees/species.tree -rw-r--r-- root/root 1847 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PAML/gen_results.py.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PDB/ -rw-r--r-- root/root 10295 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.asa.gz -rw-r--r-- root/root 24449 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.cif.gz -rw-r--r-- root/root 6957 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.mmtf.gz -rw-r--r-- root/root 18066 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.pdb.gz -rw-r--r-- root/root 2401 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.rsa.gz -rw-r--r-- root/root 6936 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.xyzr.gz -rw-r--r-- root/root 106373 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1AS5.cif.gz -rw-r--r-- root/root 84629 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.cif.gz -rw-r--r-- root/root 54627 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.pdb.gz -rw-r--r-- root/root 2218 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1MOM_min.cif -rw-r--r-- root/root 856 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1SSU_mod.cif -rw-r--r-- root/root 360 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/1SSU_mod.pdb -rw-r--r-- root/root 377677 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.cif.gz -rw-r--r-- root/root 6313 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.dssp.gz -rw-r--r-- root/root 34769 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.pdb.gz -rw-r--r-- root/root 6132 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2BEG_noheader.dssp.gz -rw-r--r-- root/root 105534 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2OFG.cif.gz -rw-r--r-- root/root 339325 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.cif.gz -rw-r--r-- root/root 283064 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.pdb.gz -rw-r--r-- root/root 16288 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/3JQH.cif.gz -rw-r--r-- root/root 62164 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.cif.gz -rw-r--r-- root/root 11135 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.mmtf.gz -rw-r--r-- root/root 351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/4Q9R_min.cif -rw-r--r-- root/root 63245 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.cif.gz -rw-r--r-- root/root 18659 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.mmtf.gz -rw-r--r-- root/root 2038 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/Miller_RASA.txt -rw-r--r-- root/root 2368 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/Sander_RASA.txt -rw-r--r-- root/root 2341 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/Wilke_RASA.txt -rw-r--r-- root/root 15032 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.cif.gz -rw-r--r-- root/root 18446 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.pdb.gz -rw-r--r-- root/root 1182 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/alignment_file.fa -rw-r--r-- root/root 2997 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/dssp_xtra_Sander.txt.gz -rw-r--r-- root/root 189 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/ions.pdb -rw-r--r-- root/root 955 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/lib_10_z_5.txt.gz -rw-r--r-- root/root 368 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PDB/occupancy.pdb drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Phd/ -rw-r--r-- root/root 10779 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phd/phd1.gz -rw-r--r-- root/root 1973 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phd/phd2 -rw-r--r-- root/root 544 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phd/phd_454 -rw-r--r-- root/root 740 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phd/phd_solexa drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/ -rw-r--r-- root/root 521 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/hennigian.phy -rw-r--r-- root/root 521 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/horses.phy -rw-r--r-- root/root 527 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/horses.tree -rw-r--r-- root/root 1575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/interlaced.phy -rw-r--r-- root/root 709 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/interlaced2.phy -rw-r--r-- root/root 521 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/random.phy -rw-r--r-- root/root 159 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/reference_dna.phy -rw-r--r-- root/root 329 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/reference_dna2.phy -rw-r--r-- root/root 1569 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/sequential.phy -rw-r--r-- root/root 575 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Phylip/sequential2.phy drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/ -rw-r--r-- root/root 3925 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/apaf.xml.gz -rw-r--r-- root/root 5221 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/bcl_2.xml.gz -rw-r--r-- root/root 1609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/distribution.xml -rw-r--r-- root/root 882 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/example.xml -rw-r--r-- root/root 1566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/made_up.xml.gz -rw-r--r-- root/root 8460 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/o_tol_332_d_dollo.xml.gz -rw-r--r-- root/root 2657 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PhyloXML/phyloxml_examples.xml.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/PopGen/ -rw-r--r-- root/root 282 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/README -rw-r--r-- root/root 5046 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/big.gen.gz -rw-r--r-- root/root 345 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/c2line.gen -rw-r--r-- root/root 364 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/c2space.gen -rw-r--r-- root/root 436 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/c3line.gen -rw-r--r-- root/root 434 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/c3space.gen -rw-r--r-- root/root 3153 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/haplo.gen.gz -rw-r--r-- root/root 290 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/haplo2.gen -rw-r--r-- root/root 326 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/PopGen/haplo3.gen drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/ -rw-r--r-- root/root 2641 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00100.txt.gz -rw-r--r-- root/root 2771 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00113.txt -rw-r--r-- root/root 2612 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00144.txt -rw-r--r-- root/root 3485 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00149.txt -rw-r--r-- root/root 3920 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00340.txt -rw-r--r-- root/root 3340 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00424.txt -rw-r--r-- root/root 3603 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00472.txt -rw-r--r-- root/root 3493 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00640.txt -rw-r--r-- root/root 2333 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00787.txt -rw-r--r-- root/root 2596 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00933.txt -rw-r--r-- root/root 4221 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/prosite.excerpt.doc.gz -rw-r--r-- root/root 18823 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00107.txt.gz -rw-r--r-- root/root 805 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00159.txt -rw-r--r-- root/root 3204 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00165.txt -rw-r--r-- root/root 3217 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00432.txt.gz -rw-r--r-- root/root 3944 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00488.txt -rw-r--r-- root/root 3610 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Prosite/ps00546.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Quality/ -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_diff_ids.fastq -rw-r--r-- root/root 669 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_double_qual.fastq -rw-r--r-- root/root 669 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_double_seq.fastq -rw-r--r-- root/root 609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_long_qual.fastq -rw-r--r-- root/root 482 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_no_qual.fastq -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_del.fastq -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_escape.fastq -rw-r--r-- root/root 610 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_null.fastq -rw-r--r-- root/root 609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_space.fastq -rw-r--r-- root/root 609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_tab.fastq -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_unit_sep.fastq -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_vtab.fastq -rw-r--r-- root/root 607 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_short_qual.fastq -rw-r--r-- root/root 628 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_spaces.fastq -rw-r--r-- root/root 629 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_tabs.fastq -rw-r--r-- root/root 548 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_plus.fastq -rw-r--r-- root/root 582 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_qual.fastq -rw-r--r-- root/root 522 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_seq.fastq -rw-r--r-- root/root 562 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_plus.fastq -rw-r--r-- root/root 607 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_qual.fastq -rw-r--r-- root/root 535 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_seq.fastq -rw-r--r-- root/root 513 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_title.fastq -rw-r--r-- root/root 150 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example.fasta -rw-r--r-- root/root 234 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example.fastq -rw-r--r-- root/root 175 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example.fastq.bgz -rw-r--r-- root/root 297 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example.qual -rw-r--r-- root/root 246 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example_dos.fastq -rw-r--r-- root/root 180 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/example_dos.fastq.bgz -rw-r--r-- root/root 131 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/illumina_faked.fastq -rw-r--r-- root/root 426 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_illumina.fastq -rw-r--r-- root/root 426 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_sanger.fastq -rw-r--r-- root/root 426 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_solexa.fastq -rw-r--r-- root/root 426 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_original_illumina.fastq -rw-r--r-- root/root 3242 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_illumina.fastq.gz -rw-r--r-- root/root 3218 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_sanger.fastq.gz -rw-r--r-- root/root 3242 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_solexa.fastq.gz -rw-r--r-- root/root 3382 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/longreads_original_sanger.fastq.gz -rw-r--r-- root/root 767 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_illumina.fastq -rw-r--r-- root/root 767 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_sanger.fastq -rw-r--r-- root/root 767 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_solexa.fastq -rw-r--r-- root/root 767 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_original_sanger.fastq -rw-r--r-- root/root 774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_illumina.fastq -rw-r--r-- root/root 774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_sanger.fastq -rw-r--r-- root/root 774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_solexa.fastq -rw-r--r-- root/root 774 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_original_sanger.fastq -rw-r--r-- root/root 237 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_93.fastq -rw-r--r-- root/root 131 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_faked.fastq -rw-r--r-- root/root 550 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_illumina.fastq -rw-r--r-- root/root 550 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_sanger.fastq -rw-r--r-- root/root 550 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_solexa.fastq -rw-r--r-- root/root 550 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_original_sanger.fastq -rw-r--r-- root/root 608 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_example.fastq -rw-r--r-- root/root 136 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_faked.fastq -rw-r--r-- root/root 450 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_illumina.fastq -rw-r--r-- root/root 450 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_sanger.fastq -rw-r--r-- root/root 450 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_solexa.fastq -rw-r--r-- root/root 450 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_original_solexa.fastq -rw-r--r-- root/root 458 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/tricky.fastq -rw-r--r-- root/root 963 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_illumina.fastq -rw-r--r-- root/root 963 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_sanger.fastq -rw-r--r-- root/root 963 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_solexa.fastq -rw-r--r-- root/root 975 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_original_sanger.fastq -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Quality/zero_length.fastq drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/ -rw-r--r-- root/root 7545 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/bamii.htm -rw-r--r-- root/root 1336 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/bamii.txt -rw-r--r-- root/root 6133 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/cac81.htm -rw-r--r-- root/root 890 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/cac81.txt -rw-r--r-- root/root 7319 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/crei.htm -rw-r--r-- root/root 1620 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/crei.txt -rw-r--r-- root/root 7530 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/foki.htm -rw-r--r-- root/root 1531 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/foki.txt -rw-r--r-- root/root 7331 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/pvuii.htm -rw-r--r-- root/root 1271 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/pvuii.txt -rw-r--r-- root/root 7307 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/taqi.htm -rw-r--r-- root/root 1265 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Rebase/taqi.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Registry/ -rw-r--r-- root/root 2735 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Registry/EDD_RAT.dat.gz -rw-r--r-- root/root 3684 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Registry/bt001 -rw-r--r-- root/root 662 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Registry/seqs.fasta drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/Roche/ -rw-r--r-- root/root 9019 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_end.sff.gz -rw-r--r-- root/root 9019 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_start.sff.gz -rw-r--r-- root/root 9025 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff.gz -rw-r--r-- root/root 9268 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_at_start.sff.gz -rw-r--r-- root/root 9302 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_in_middle.sff.gz -rw-r--r-- root/root 8997 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_no_manifest.sff.gz -rw-r--r-- root/root 3222 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.fasta -rw-r--r-- root/root 2112 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.qual.gz -rw-r--r-- root/root 9261 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -rw-r--r-- root/root 3483 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -rw-r--r-- root/root 2326 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual.gz -rw-r--r-- root/root 1568 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/README.txt -rw-r--r-- root/root 29130 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/greek.sff.gz -rw-r--r-- root/root 38081 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/invalid_greek_E3MFGYR02.sff.gz -rw-r--r-- root/root 34149 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/invalid_paired_E3MFGYR02.sff.gz -rw-r--r-- root/root 25126 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/paired.sff.gz -rw-r--r-- root/root 1466 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff.idx.gz -rw-r--r-- root/root 1493 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff_rel_paths.idx.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/SCOP/ -rw-r--r-- root/root 1302 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/dir.cla.scop.txt_test -rw-r--r-- root/root 663 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/dir.des.scop.txt_test -rw-r--r-- root/root 388 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/dir.hie.scop.txt_test -rw-r--r-- root/root 1310 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/raftest.txt.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/ -rw-r--r-- root/root 434 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -rw-r--r-- root/root 24 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -rw-r--r-- root/root 8 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -rw-r--r-- root/root 380 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SCOP/testDom.txt drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Saf/ -rw-r--r-- root/root 3672 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Saf/saf1.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ -rw-r--r-- root/root 17706 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/bam1.bam.gz -rw-r--r-- root/root 17728 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/bam1_sorted.bam.gz -rw-r--r-- root/root 17914 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/bam2.bam.gz -rw-r--r-- root/root 17936 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/bam2_sorted.bam.gz -rw-r--r-- root/root 124622 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.bam.gz -rw-r--r-- root/root 3225 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.fa -rw-r--r-- root/root 109551 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.sam.gz -rw-r--r-- root/root 124719 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.bam.gz -rw-r--r-- root/root 109610 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.sam.gz -rw-r--r-- root/root 124668 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_refresh.bam.gz -rw-r--r-- root/root 1014 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/readme.txt -rw-r--r-- root/root 17679 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/sam1.sam.gz -rw-r--r-- root/root 17809 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SamBam/sam2.sam.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/ -rw-r--r-- root/root 2916 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/corrupt_example1.xml -rw-r--r-- root/root 406 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/corrupt_example2.xml -rw-r--r-- root/root 3481 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/dna_example.xml -rw-r--r-- root/root 770 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/global_species_example.xml -rw-r--r-- root/root 2011 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/protein_example.xml -rw-r--r-- root/root 1117 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SeqXML/rna_example.xml drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Stockholm/ -rw-r--r-- root/root 2433 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Stockholm/funny.sth -rw-r--r-- root/root 740 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Stockholm/simple.sth drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/ -rw-r--r-- root/root 334 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/aaDistrib.txt -rw-r--r-- root/root 3658 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/acc_rep_mat.pik -rw-r--r-- root/root 136 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/protein_count.txt -rw-r--r-- root/root 238 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/protein_freq.txt -rw-r--r-- root/root 114 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/redAADistrib.txt -rw-r--r-- root/root 132 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SubsMat/redAltAADistrib.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/ -rw-r--r-- root/root 3377 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.txt -rw-r--r-- root/root 2111 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.xml.gz -rw-r--r-- root/root 2184 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/H2CNN8.txt -rw-r--r-- root/root 3804 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/H2CNN8.xml -rw-r--r-- root/root 3676 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/P84001.xml -rw-r--r-- root/root 2726 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/P97881.xml.gz -rw-r--r-- root/root 4346 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.txt.gz -rw-r--r-- root/root 5313 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.xml.gz -rw-r--r-- root/root 2550 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/R5HY77.xml.gz -rw-r--r-- root/root 1479 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/README -rw-r--r-- root/root 3251 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/keywlist.txt -rw-r--r-- root/root 1343 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/keywlist2.txt -rw-r--r-- root/root 3242 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.fasta -rw-r--r-- root/root 1719 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.gff.gz -rw-r--r-- root/root 56 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.list -rw-r--r-- root/root 39291 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.rdf.gz -rw-r--r-- root/root 23566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.txt.gz -rw-r--r-- root/root 28395 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.xml.gz -rw-r--r-- root/root 3268 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp001 -rw-r--r-- root/root 2803 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp002 -rw-r--r-- root/root 3146 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp003.gz -rw-r--r-- root/root 2121 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp004.gz -rw-r--r-- root/root 2364 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp005 -rw-r--r-- root/root 2471 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp006 -rw-r--r-- root/root 2912 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp007 -rw-r--r-- root/root 5353 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp008.gz -rw-r--r-- root/root 2859 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp009 -rw-r--r-- root/root 3027 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp010.gz -rw-r--r-- root/root 4041 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp011.gz -rw-r--r-- root/root 1580 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp012 -rw-r--r-- root/root 1182 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp013 -rw-r--r-- root/root 4174 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp014.gz -rw-r--r-- root/root 1115 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp015 -rw-r--r-- root/root 4586 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/sp016.gz -rw-r--r-- root/root 1597 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/uni001.gz -rw-r--r-- root/root 3008 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/uni002.gz -rw-r--r-- root/root 6301 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/SwissProt/uni003.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/ -rw-r--r-- root/root 296 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/adam_refs.tre -rw-r--r-- root/root 296 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/consensus_refs.tre -rw-r--r-- root/root 98 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/majority_ref.tre -rw-r--r-- root/root 130 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/msa.phy -rw-r--r-- root/root 544 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/neighbor_trees.tre -rw-r--r-- root/root 120 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/nj.tre -rw-r--r-- root/root 136 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/pars3.tre -rw-r--r-- root/root 296 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/strict_refs.tre -rw-r--r-- root/root 1504 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/test.log -rw-r--r-- root/root 120 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/trees.tre -rw-r--r-- root/root 136 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/TreeConstruction/upgma.tre drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/UniGene/ -rw-r--r-- root/root 2961 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/UniGene/Eca.1.2425.data.gz -rw-r--r-- root/root 1502 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/UniGene/Hs.2.data.gz -rw-r--r-- root/root 1958 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/UniGene/Mdm_partial.data drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/UniProt/ -rw-r--r-- root/root 7810 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/UniProt/goa_yeast.gaf.gz drwxr-xr-x root/root 0 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Wise/ -rw-r--r-- root/root 342 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Wise/human_114_g01_exons.fna_01 -rw-r--r-- root/root 99 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/Wise/human_114_g02_exons.fna_01 -rw-r--r-- root/root 795 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/biosql.ini.appveyor -rw-r--r-- root/root 706 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/biosql.ini.sample drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/codonalign/ -rw-r--r-- root/root 1004 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/adh.aln.gz -rw-r--r-- root/root 1224 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/drosophilla.fasta.gz -rw-r--r-- root/root 345 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_id -rw-r--r-- root/root 8092 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_nucl.fa.gz -rw-r--r-- root/root 3698 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_pro.aln.gz -rw-r--r-- root/root 1244 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/nucl1.fa -rw-r--r-- root/root 2104 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/nucl2.fa.gz -rw-r--r-- root/root 3463 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/nucl3.fa.gz -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/nucl4.fa.gz -rw-r--r-- root/root 1244 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/nucl5.fa -rw-r--r-- root/root 1397 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/pro1.aln -rw-r--r-- root/root 1704 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/pro2.aln.gz -rw-r--r-- root/root 2955 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/pro3.aln.gz -rw-r--r-- root/root 2963 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/pro4.aln.gz -rw-r--r-- root/root 1397 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/codonalign/pro5.aln -rw-r--r-- root/root 9208 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/common_BioSQL.py.gz -rw-r--r-- root/root 1858 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/common_BioSQL_online.py.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/motifs/ -rw-r--r-- root/root 607 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/Arnt.sites -rw-r--r-- root/root 141 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/REB1.pfm -rw-r--r-- root/root 144 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/SRF.pfm -rw-r--r-- root/root 2642 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/alignace.out.gz -rw-r--r-- root/root 3351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/mast.dna.oops.txt.gz -rw-r--r-- root/root 9879 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.oops.txt.gz -rw-r--r-- root/root 4696 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/mast.protein.tcm.txt.gz -rw-r--r-- root/root 3082 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme.dna.oops.txt.gz -rw-r--r-- root/root 2281 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme.out.gz -rw-r--r-- root/root 11638 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.oops.txt.gz -rw-r--r-- root/root 8017 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme.protein.tcm.txt.gz -rw-r--r-- root/root 3299 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme.rna.oops.txt.gz -rw-r--r-- root/root 2073 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/meme_v_4_11_4.txt.gz -rw-r--r-- root/root 1786 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/minimal_test.meme -rw-r--r-- root/root 961 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/motifs/transfac.dat drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/output/ -rw-r--r-- root/root 5064 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_AlignIO.gz -rw-r--r-- root/root 21 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_AlignIO_MauveIO -rw-r--r-- root/root 1224 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_ClustalOmega_tool -rw-r--r-- root/root 1319 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_Clustalw.gz -rw-r--r-- root/root 1328 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_Clustalw_tool -rw-r--r-- root/root 784 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_CodonUsage -rw-r--r-- root/root 930 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_FSSP -rw-r--r-- root/root 546 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_Fasttree_tool -rw-r--r-- root/root 138 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_File -rw-r--r-- root/root 64 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_GFF -rw-r--r-- root/root 181 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_GFF2 -rw-r--r-- root/root 68780 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_GenBank.gz -rw-r--r-- root/root 81 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_HMMCasino -rw-r--r-- root/root 10 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_KEGG -rw-r--r-- root/root 565 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_Location -rw-r--r-- root/root 1015 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_NCBI_qblast -rw-r--r-- root/root 1140 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_PDB.gz -rw-r--r-- root/root 460 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_SearchIO_legacy -rw-r--r-- root/root 16926 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_SeqIO.gz -rw-r--r-- root/root 8318 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_SubsMat.gz -rw-r--r-- root/root 3140 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_align.gz -rw-r--r-- root/root 14136 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_geo.gz -rw-r--r-- root/root 206 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_property_manager -rw-r--r-- root/root 309 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/output/test_translate drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/phenotype/ -rw-r--r-- root/root 34864 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/BadPlate.json.gz -rw-r--r-- root/root 34890 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/Plate.json.gz -rw-r--r-- root/root 7348 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/Plate_2.json.gz -rw-r--r-- root/root 25504 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/Plates.csv.gz -rw-r--r-- root/root 10355 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate.json.gz -rw-r--r-- root/root 2147 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate_2.json.gz -rw-r--r-- root/root 2679 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlates.csv.gz -rw-r--r-- root/root 1216 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/requires_internet.py -rw-r--r-- root/root 880 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/requires_wise.py -rw-r--r-- root/root 6331 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/run_tests.py.gz -rw-r--r-- root/root 2197 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/search_tests_common.py.gz -rw-r--r-- root/root 3281 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/seq_tests_common.py.gz -rw-r--r-- root/root 9687 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Ace.py.gz -rw-r--r-- root/root 2183 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Affy.py.gz -rw-r--r-- root/root 4224 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO.py.gz -rw-r--r-- root/root 3099 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_ClustalIO.py.gz -rw-r--r-- root/root 3610 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_EmbossIO.py.gz -rw-r--r-- root/root 6009 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_FastaIO.py.gz -rw-r--r-- root/root 1916 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_MauveIO.py.gz -rw-r--r-- root/root 3254 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_PhylipIO.py.gz -rw-r--r-- root/root 2893 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignIO_convert.py -rw-r--r-- root/root 1720 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_AlignInfo.py.gz -rw-r--r-- root/root 871 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Application.py.gz -rw-r--r-- root/root 2010 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BWA_tool.py.gz -rw-r--r-- root/root 792 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_MySQLdb_online.py -rw-r--r-- root/root 649 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_mysql_connector.py -rw-r--r-- root/root 800 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_mysql_connector_online.py -rw-r--r-- root/root 794 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_psycopg2_online.py -rw-r--r-- root/root 2513 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_sqlite3.py -rw-r--r-- root/root 844 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_BioSQL_sqlite3_online.py -rw-r--r-- root/root 3912 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_CAPS.py -rw-r--r-- root/root 1405 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_CelFile.py.gz -rw-r--r-- root/root 1218 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Chi2.py -rw-r--r-- root/root 2248 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_ClustalOmega_tool.py.gz -rw-r--r-- root/root 3384 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Clustalw_tool.py.gz -rw-r--r-- root/root 6024 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Cluster.py.gz -rw-r--r-- root/root 5014 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_CodonTable.py.gz -rw-r--r-- root/root 1201 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_CodonUsage.py -rw-r--r-- root/root 1513 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_ColorSpiral.py.gz -rw-r--r-- root/root 3972 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Compass.py -rw-r--r-- root/root 1384 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Consensus.py.gz -rw-r--r-- root/root 2370 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Crystal.py.gz -rw-r--r-- root/root 2751 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_DSSP_tool.py -rw-r--r-- root/root 1290 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Dialign_tool.py.gz -rw-r--r-- root/root 2897 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_EMBL_unittest.py -rw-r--r-- root/root 7965 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Emboss.py.gz -rw-r--r-- root/root 2164 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_EmbossPrimer.py.gz -rw-r--r-- root/root 1889 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Entrez.py.gz -rw-r--r-- root/root 3175 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Entrez_online.py.gz -rw-r--r-- root/root 51590 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Entrez_parser.py.gz -rw-r--r-- root/root 1493 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Enzyme.py.gz -rw-r--r-- root/root 1869 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_ExPASy.py -rw-r--r-- root/root 2016 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_FSSP.py -rw-r--r-- root/root 2271 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Fasttree_tool.py.gz -rw-r--r-- root/root 1506 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_File.py.gz -rw-r--r-- root/root 2728 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GenBank.py.gz -rw-r--r-- root/root 6194 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GenBank_unittest.py.gz -rw-r--r-- root/root 9099 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/test_GenomeDiagram.py.gz -rw-r--r-- root/root 4070 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GraphicsBitmaps.py -rw-r--r-- root/root 12484 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GraphicsChromosome.py.gz -rw-r--r-- root/root 2711 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GraphicsDistribution.py -rw-r--r-- root/root 3207 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_GraphicsGeneral.py -rw-r--r-- root/root 1982 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_HMMCasino.py.gz -rw-r--r-- root/root 3538 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_HMMGeneral.py.gz -rw-r--r-- root/root 1409 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KDTree.py.gz -rw-r--r-- root/root 2080 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KEGG.py.gz -rw-r--r-- root/root 1495 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KEGG_online.py.gz -rw-r--r-- root/root 2328 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics.py.gz -rw-r--r-- root/root 2797 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics_online.py -rw-r--r-- root/root 1540 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KGML_nographics.py.gz -rw-r--r-- root/root 1242 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_KeyWList.py.gz -rw-r--r-- root/root 1943 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Location.py -rw-r--r-- root/root 1286 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_LogisticRegression.py.gz -rw-r--r-- root/root 4997 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_MafIO_index.py.gz -rw-r--r-- root/root 2001 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Mafft_tool.py.gz -rw-r--r-- root/root 3684 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_MarkovModel.py.gz -rw-r--r-- root/root 4646 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Medline.py.gz -rw-r--r-- root/root 3202 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Muscle_tool.py.gz -rw-r--r-- root/root 145282 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_NCBITextParser.py.gz -rw-r--r-- root/root 10104 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_NCBIXML.py.gz -rw-r--r-- root/root 4415 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_NCBI_BLAST_tools.py.gz -rw-r--r-- root/root 3573 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_NCBI_qblast.py.gz -rw-r--r-- root/root 1285 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_NaiveBayes.py.gz -rw-r--r-- root/root 6900 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Nexus.py.gz -rw-r--r-- root/root 2199 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PAML_baseml.py.gz -rw-r--r-- root/root 3875 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PAML_codeml.py.gz -rw-r--r-- root/root 1403 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PAML_yn00.py.gz -rw-r--r-- root/root 14857 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB.py.gz -rw-r--r-- root/root 1319 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDBList.py.gz -rw-r--r-- root/root 1262 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_FragmentMapper.py -rw-r--r-- root/root 1950 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_KDTree.py.gz -rw-r--r-- root/root 4529 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIF2Dict.py.gz -rw-r--r-- root/root 3273 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIFParser.py.gz -rw-r--r-- root/root 3669 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_Polypetide.py -rw-r--r-- root/root 3905 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_ResidueDepth.py -rw-r--r-- root/root 1793 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_StructureAlignment.py -rw-r--r-- root/root 1171 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_Superimposer.py.gz -rw-r--r-- root/root 1439 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PDB_vectors.py -rw-r--r-- root/root 1424 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Pathway.py.gz -rw-r--r-- root/root 2793 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phd.py.gz -rw-r--r-- root/root 4750 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phylo.py.gz -rw-r--r-- root/root 7144 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PhyloXML.py.gz -rw-r--r-- root/root 3294 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phylo_CDAO.py -rw-r--r-- root/root 3901 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phylo_NeXML.py -rw-r--r-- root/root 3626 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phylo_matplotlib.py -rw-r--r-- root/root 1172 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Phylo_networkx.py -rw-r--r-- root/root 1609 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_PopGen_GenePop_nodepend.py.gz -rw-r--r-- root/root 2535 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Prank_tool.py.gz -rw-r--r-- root/root 3824 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Probcons_tool.py -rw-r--r-- root/root 2772 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_ProtParam.py.gz -rw-r--r-- root/root 1876 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_QCPSuperimposer.py.gz -rw-r--r-- root/root 2516 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_RCSBFormats.py -rw-r--r-- root/root 5193 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Restriction.py.gz -rw-r--r-- root/root 2272 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Astral.py -rw-r--r-- root/root 3681 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Cla.py -rw-r--r-- root/root 1969 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Des.py -rw-r--r-- root/root 1857 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Dom.py -rw-r--r-- root/root 1414 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Hie.py -rw-r--r-- root/root 1444 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Raf.py.gz -rw-r--r-- root/root 2355 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Residues.py -rw-r--r-- root/root 1748 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_Scop.py.gz -rw-r--r-- root/root 636 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SCOP_online.py -rw-r--r-- root/root 4054 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SVDSuperimposer.py -rw-r--r-- root/root 3270 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab.py.gz -rw-r--r-- root/root 1495 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab_index.py.gz -rw-r--r-- root/root 8583 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_text.py.gz -rw-r--r-- root/root 14280 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml.py.gz -rw-r--r-- root/root 3449 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml_index.py.gz -rw-r--r-- root/root 3176 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl.py.gz -rw-r--r-- root/root 2600 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl_index.py -rw-r--r-- root/root 9302 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate.py.gz -rw-r--r-- root/root 954 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate_text_index.py -rw-r--r-- root/root 967 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate_vulgar_index.py -rw-r--r-- root/root 13517 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10.py.gz -rw-r--r-- root/root 2166 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10_index.py -rw-r--r-- root/root 3985 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text.py.gz -rw-r--r-- root/root 6781 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text_index.py.gz -rw-r--r-- root/root 2772 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab.py.gz -rw-r--r-- root/root 1345 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab_index.py.gz -rw-r--r-- root/root 2107 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab.py.gz -rw-r--r-- root/root 1127 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab_index.py.gz -rw-r--r-- root/root 7878 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text.py.gz -rw-r--r-- root/root 3620 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text_index.py.gz -rw-r--r-- root/root 2627 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_interproscan_xml.py -rw-r--r-- root/root 1363 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_legacy.py.gz -rw-r--r-- root/root 9993 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_model.py.gz -rw-r--r-- root/root 1484 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SearchIO_write.py.gz -rw-r--r-- root/root 945 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqFeature.py.gz -rw-r--r-- root/root 7821 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO.py.gz -rw-r--r-- root/root 161973 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_AbiIO.py.gz -rw-r--r-- root/root 2523 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_FastaIO.py.gz -rw-r--r-- root/root 3890 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_Insdc.py -rw-r--r-- root/root 1910 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_PdbIO.py.gz -rw-r--r-- root/root 6518 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_QualityIO.py.gz -rw-r--r-- root/root 2051 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SeqXML.py.gz -rw-r--r-- root/root 2592 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_convert.py.gz -rw-r--r-- root/root 9351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_features.py.gz -rw-r--r-- root/root 6061 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_index.py.gz -rw-r--r-- root/root 3540 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_online.py -rw-r--r-- root/root 2602 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqIO_write.py.gz -rw-r--r-- root/root 3738 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqRecord.py.gz -rw-r--r-- root/root 2415 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SeqUtils.py.gz -rw-r--r-- root/root 5527 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Seq_objs.py.gz -rw-r--r-- root/root 4334 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SffIO.py.gz -rw-r--r-- root/root 3017 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SubsMat.py -rw-r--r-- root/root 15781 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_SwissProt.py.gz -rw-r--r-- root/root 1308 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_TCoffee_tool.py.gz -rw-r--r-- root/root 4217 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_TogoWS.py.gz -rw-r--r-- root/root 2279 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_TreeConstruction.py.gz -rw-r--r-- root/root 3438 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Tutorial.py.gz -rw-r--r-- root/root 7867 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_UniGene.py.gz -rw-r--r-- root/root 6611 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Uniprot.py.gz -rw-r--r-- root/root 2604 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_Wise.py -rw-r--r-- root/root 2012 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_align.py.gz -rw-r--r-- root/root 3623 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_bgzf.py.gz -rw-r--r-- root/root 1824 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_cellosaurus.py.gz -rw-r--r-- root/root 3685 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_codonalign.py.gz -rw-r--r-- root/root 1239 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_geo.py -rw-r--r-- root/root 3546 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_kNN.py -rw-r--r-- root/root 1114 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_lowess.py -rw-r--r-- root/root 1326 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_mmtf.py.gz -rw-r--r-- root/root 1047 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_mmtf_online.py -rw-r--r-- root/root 14263 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_motifs.py.gz -rw-r--r-- root/root 1939 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_motifs_online.py -rw-r--r-- root/root 3499 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_pairwise2.py.gz -rw-r--r-- root/root 3957 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_pairwise_aligner.py.gz -rw-r--r-- root/root 2704 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_phenotype.py.gz -rw-r--r-- root/root 2345 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/test_phenotype_fit.py -rw-r--r-- root/root 15276 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_prodoc.py.gz -rw-r--r-- root/root 28261 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_prosite1.py.gz -rw-r--r-- root/root 8216 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_prosite2.py.gz -rw-r--r-- root/root 1102 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_psw.py.gz -rw-r--r-- root/root 2351 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_raxml_tool.py -rw-r--r-- root/root 2446 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_samtools_tool.py.gz -rw-r--r-- root/root 8298 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_seq.py.gz -rw-r--r-- root/root 3733 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_translate.py -rw-r--r-- root/root 1869 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/test_trie.py.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ -rw-r--r-- root/root 17122 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10.maf.gz -rw-r--r-- root/root 1566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_abs.mafindex.gz -rw-r--r-- root/root 1566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_abs_rel.mafindex.gz -rw-r--r-- root/root 17125 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_bad.maf.gz -rw-r--r-- root/root 1566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_abs.mafindex.gz -rw-r--r-- root/root 1566 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests/tmp_MAF/ucsc_mm9_chr10_rel_rel.mafindex.gz drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/Tests_avoid/ -rw-r--r-- root/root 632 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_BioSQL_MySQLdb.py -rw-r--r-- root/root 634 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_BioSQL_psycopg2.py -rw-r--r-- root/root 2998 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_EmbossPhylipNew.py.gz -rw-r--r-- root/root 1611 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_MSAProbs_tool.py.gz -rw-r--r-- root/root 1259 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_NACCESS_tool.py -rw-r--r-- root/root 1489 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py.gz -rw-r--r-- root/root 3370 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop.py -rw-r--r-- root/root 1453 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop_EasyController.py.gz -rw-r--r-- root/root 1827 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_XXmotif_tool.py.gz -rw-r--r-- root/root 2644 2018-12-18 12:44 ./usr/share/doc/python-biopython-doc/Tests_avoid/test_phyml_tool.py -rw-r--r-- root/root 1326 2019-03-04 19:21 ./usr/share/doc/python-biopython-doc/changelog.Debian.gz -rw-r--r-- root/root 2038 2019-01-11 22:23 ./usr/share/doc/python-biopython-doc/copyright drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython/ -rw-r--r-- root/root 943 2019-01-11 22:23 ./usr/share/doc/python-biopython/README.test drwxr-xr-x root/root 0 2019-01-11 22:23 ./usr/share/doc/python-biopython/Tests_fixme/ -rw-r--r-- root/root 1464 2019-01-11 22:23 ./usr/share/doc/python-biopython/Tests_fixme/run_failing_tests -rw-r--r-- root/root 1301 2019-01-11 22:23 ./usr/share/doc/python-biopython/run-unit-test drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/lintian/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 282 2019-01-11 22:23 ./usr/share/lintian/overrides/python-biopython-doc python-biopython-sql_1.73+dfsg-1ubuntu1_all.deb ----------------------------------------------- new debian package, version 2.0. size 26328 bytes: control archive=1112 bytes. 784 bytes, 18 lines control 505 bytes, 6 lines md5sums 170 bytes, 9 lines * postinst #!/bin/sh 279 bytes, 14 lines * prerm #!/bin/sh Package: python-biopython-sql Source: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: all Maintainer: Ubuntu Developers Installed-Size: 138 Depends: python:any (<< 2.8), python:any (>= 2.7~), python-mysqldb, python-biopython Provides: python2.7-biopython-sql Section: python Priority: optional Homepage: http://biopython.org Description: Biopython support for the BioSQL database schema (Python 2) This is the Biopython interface to a BioSQL database (see www.biosql.org for details). BioPerl, BioJava and BioRuby also provide their own BioSQL interfaces onto the same shared SQL schema. . This package is targeting Python version 2. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2019-03-04 19:21 ./ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/BioSQL/ -rw-r--r-- root/root 24833 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/BioSQL/BioSeq.py -rw-r--r-- root/root 35509 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/BioSQL/BioSeqDatabase.py -rw-r--r-- root/root 4669 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/BioSQL/DBUtils.py -rw-r--r-- root/root 52384 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/BioSQL/Loader.py -rw-r--r-- root/root 617 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/BioSQL/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-sql/ lrwxrwxrwx root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython-sql/changelog.Debian.gz -> ../python-biopython/changelog.Debian.gz -rw-r--r-- root/root 2038 2019-01-11 22:23 ./usr/share/doc/python-biopython-sql/copyright python-biopython_1.73+dfsg-1ubuntu1_amd64.deb --------------------------------------------- new debian package, version 2.0. size 1329964 bytes: control archive=15812 bytes. 1567 bytes, 27 lines control 56281 bytes, 591 lines md5sums 166 bytes, 9 lines * postinst #!/bin/sh 271 bytes, 14 lines * prerm #!/bin/sh Package: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: amd64 Maintainer: Ubuntu Developers Installed-Size: 8974 Depends: python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9, python (<< 2.8), python (>= 2.7~), python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.14), python-reportlab Recommends: python-biopython-doc (= 1.73+dfsg-1ubuntu1), ncbi-blast+ Suggests: python-tk, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, phylip, phyml, prank, probcons, python-mysqldb, python-matplotlib, python-pil, python-rdflib (>= 4), python-renderpm, python-psycopg2, python-scipy, raxml, samtools, t-coffee, wise (>= 2.4.1-16), w3-dtd-mathml Section: python Priority: optional Homepage: http://biopython.org Description: Python library for bioinformatics (implemented in Python 2) The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. . This package is targeting Python version 2. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2019-03-04 19:21 ./ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Affy/ -rw-r--r-- root/root 13805 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Affy/CelFile.py -rw-r--r-- root/root 296 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Affy/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Align/ -rw-r--r-- root/root 31593 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/AlignInfo.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/ -rw-r--r-- root/root 9672 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py -rw-r--r-- root/root 19806 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Clustalw.py -rw-r--r-- root/root 9712 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Dialign.py -rw-r--r-- root/root 3402 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_MSAProbs.py -rw-r--r-- root/root 19365 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Mafft.py -rw-r--r-- root/root 34439 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Muscle.py -rw-r--r-- root/root 10603 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Prank.py -rw-r--r-- root/root 5141 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Probcons.py -rw-r--r-- root/root 4698 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_TCoffee.py -rw-r--r-- root/root 1097 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/__init__.py -rw-r--r-- root/root 50831 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/__init__.py -rw-r--r-- root/root 199373 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Align/_aligners.c -rw-r--r-- root/root 97120 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Align/_aligners.x86_64-linux-gnu.so drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/ -rw-r--r-- root/root 12056 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.py -rw-r--r-- root/root 9691 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.py -rw-r--r-- root/root 14676 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.py -rw-r--r-- root/root 6242 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.py -rw-r--r-- root/root 33318 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/MafIO.py -rw-r--r-- root/root 12951 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/MauveIO.py -rw-r--r-- root/root 5672 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.py -rw-r--r-- root/root 17335 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.py -rw-r--r-- root/root 27272 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.py -rw-r--r-- root/root 20238 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/ -rw-r--r-- root/root 3255 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/IUPAC.py -rw-r--r-- root/root 7418 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/Reduced.py -rw-r--r-- root/root 15722 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Application/ -rw-r--r-- root/root 31489 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Application/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Blast/ -rw-r--r-- root/root 64429 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/Applications.py -rw-r--r-- root/root 11874 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/NCBIWWW.py -rw-r--r-- root/root 24234 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/NCBIXML.py -rw-r--r-- root/root 3896 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/ParseBlastTable.py -rw-r--r-- root/root 14988 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/Record.py -rw-r--r-- root/root 350 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Blast/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/CAPS/ -rw-r--r-- root/root 4061 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/CAPS/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Cluster/ -rw-r--r-- root/root 48398 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Cluster/__init__.py -rw-r--r-- root/root 109464 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Cluster/_cluster.x86_64-linux-gnu.so -rw-r--r-- root/root 144605 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Cluster/cluster.c -rw-r--r-- root/root 4181 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Cluster/cluster.h -rw-r--r-- root/root 77609 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Cluster/clustermodule.c drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Compass/ -rw-r--r-- root/root 7046 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Compass/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Crystal/ -rw-r--r-- root/root 8735 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Crystal/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Data/ -rw-r--r-- root/root 55366 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Data/CodonTable.py -rw-r--r-- root/root 9461 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Data/IUPACData.py -rw-r--r-- root/root 17202 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Data/SCOPData.py -rw-r--r-- root/root 353 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Data/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Emboss/ -rw-r--r-- root/root 57560 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Emboss/Applications.py -rw-r--r-- root/root 5594 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Emboss/Primer3.py -rw-r--r-- root/root 2542 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Emboss/PrimerSearch.py -rw-r--r-- root/root 355 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Emboss/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Entrez/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/ -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_0.dtd -rw-r--r-- root/root 33675 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_1.dtd -rw-r--r-- root/root 33691 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_2.dtd -rw-r--r-- root/root 36007 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_3.dtd -rw-r--r-- root/root 41304 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.dtd -rw-r--r-- root/root 41537 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -rw-r--r-- root/root 792 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/EMBL_General.dtd -rw-r--r-- root/root 2871 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/EMBL_General.mod.dtd -rw-r--r-- root/root 807 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/GenBank_General.dtd -rw-r--r-- root/root 1743 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/GenBank_General.mod.dtd -rw-r--r-- root/root 3500 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/HomoloGene.dtd -rw-r--r-- root/root 6460 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/HomoloGene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -rw-r--r-- root/root 14705 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -rw-r--r-- root/root 3893 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB.dtd -rw-r--r-- root/root 9382 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB.mod.dtd -rw-r--r-- root/root 3908 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -rw-r--r-- root/root 17213 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -rw-r--r-- root/root 3902 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Features.dtd -rw-r--r-- root/root 28680 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -rw-r--r-- root/root 3910 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -rw-r--r-- root/root 25075 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -rw-r--r-- root/root 665 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Access.dtd -rw-r--r-- root/root 1221 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -rw-r--r-- root/root 785 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Biblio.dtd -rw-r--r-- root/root 15918 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -rw-r--r-- root/root 925 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BioSource.dtd -rw-r--r-- root/root 4641 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BioTree.dtd -rw-r--r-- root/root 2444 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -rw-r--r-- root/root 3740 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Blast4.dtd -rw-r--r-- root/root 39597 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -rw-r--r-- root/root 3507 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -rw-r--r-- root/root 4281 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -rw-r--r-- root/root 692 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -rw-r--r-- root/root 6579 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -rw-r--r-- root/root 4347 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Cdd.dtd -rw-r--r-- root/root 28292 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -rw-r--r-- root/root 4005 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -rw-r--r-- root/root 16758 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -rw-r--r-- root/root 410 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -rw-r--r-- root/root 21922 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -rw-r--r-- root/root 3525 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -rw-r--r-- root/root 10316 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -rw-r--r-- root/root 2358 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -rw-r--r-- root/root 659 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -rw-r--r-- root/root 11502 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -rw-r--r-- root/root 776 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Gene.dtd -rw-r--r-- root/root 2381 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_General.dtd -rw-r--r-- root/root 8215 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_General.mod.dtd -rw-r--r-- root/root 3629 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -rw-r--r-- root/root 5733 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -rw-r--r-- root/root 3757 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -rw-r--r-- root/root 23205 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -rw-r--r-- root/root 1378 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -rw-r--r-- root/root 6931 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -rw-r--r-- root/root 907 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Medlars.dtd -rw-r--r-- root/root 1617 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -rw-r--r-- root/root 907 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Medline.dtd -rw-r--r-- root/root 5757 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -rw-r--r-- root/root 647 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mim.dtd -rw-r--r-- root/root 8395 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -rw-r--r-- root/root 4461 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mime.dtd -rw-r--r-- root/root 7270 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -rw-r--r-- root/root 665 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -rw-r--r-- root/root 3131 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -rw-r--r-- root/root 796 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.dtd -rw-r--r-- root/root 5250 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -rw-r--r-- root/root 1519 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -rw-r--r-- root/root 31800 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -rw-r--r-- root/root 1155 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -rw-r--r-- root/root 43623 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -rw-r--r-- root/root 3736 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Project.dtd -rw-r--r-- root/root 3769 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -rw-r--r-- root/root 791 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Protein.dtd -rw-r--r-- root/root 1791 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -rw-r--r-- root/root 1003 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Pub.dtd -rw-r--r-- root/root 2700 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -rw-r--r-- root/root 1021 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PubMed.dtd -rw-r--r-- root/root 1698 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -rw-r--r-- root/root 3383 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_RNA.dtd -rw-r--r-- root/root 3379 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -rw-r--r-- root/root 3495 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Remap.dtd -rw-r--r-- root/root 4064 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -rw-r--r-- root/root 781 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Rsite.dtd -rw-r--r-- root/root 1044 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -rw-r--r-- root/root 3629 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -rw-r--r-- root/root 19503 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -rw-r--r-- root/root 4231 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -rw-r--r-- root/root 9912 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -rw-r--r-- root/root 3634 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -rw-r--r-- root/root 11475 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -rw-r--r-- root/root 15026 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -rw-r--r-- root/root 3387 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -rw-r--r-- root/root 19204 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -rw-r--r-- root/root 3385 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -rw-r--r-- root/root 7383 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -rw-r--r-- root/root 3385 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqres.dtd -rw-r--r-- root/root 3149 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -rw-r--r-- root/root 3501 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqset.dtd -rw-r--r-- root/root 3479 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -rw-r--r-- root/root 3384 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Sequence.dtd -rw-r--r-- root/root 26293 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -rw-r--r-- root/root 3617 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Submit.dtd -rw-r--r-- root/root 4130 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -rw-r--r-- root/root 3379 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Systems.dtd -rw-r--r-- root/root 656 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_TSeq.dtd -rw-r--r-- root/root 1660 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -rw-r--r-- root/root 1138 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_TxInit.dtd -rw-r--r-- root/root 4625 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Variation.dtd -rw-r--r-- root/root 27155 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -rw-r--r-- root/root 7893 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_all.dtd -rw-r--r-- root/root 625 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NSE.dtd -rw-r--r-- root/root 26853 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NSE.mod.dtd -rw-r--r-- root/root 3470 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/OMSSA.dtd -rw-r--r-- root/root 34917 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/OMSSA.mod.dtd -rw-r--r-- root/root 787 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PDB_General.dtd -rw-r--r-- root/root 1815 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PDB_General.mod.dtd -rw-r--r-- root/root 3387 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PIR_General.dtd -rw-r--r-- root/root 2076 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PIR_General.mod.dtd -rw-r--r-- root/root 667 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PRF_General.dtd -rw-r--r-- root/root 1535 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/PRF_General.mod.dtd -rw-r--r-- root/root 3386 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/SP_General.dtd -rw-r--r-- root/root 2375 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/SP_General.mod.dtd -rw-r--r-- root/root 17329 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/XHTMLtablesetup.ent -rw-r--r-- root/root 51298 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivearticle.dtd -rw-r--r-- root/root 8304 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivecustom-classes.ent -rw-r--r-- root/root 16646 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivecustom-mixes.ent -rw-r--r-- root/root 38921 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivecustom-models.ent -rw-r--r-- root/root 6412 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivecustom-modules.ent -rw-r--r-- root/root 98004 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/articlemeta.ent -rw-r--r-- root/root 15090 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/backmatter.ent -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_100301.dtd -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_110101.dtd -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_120101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_130101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_140101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/bookdoc_150101.dtd -rw-r--r-- root/root 21412 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/chars.ent -rw-r--r-- root/root 152388 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/common.ent -rw-r--r-- root/root 33182 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/default-classes.ent -rw-r--r-- root/root 19402 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/default-mixes.ent -rw-r--r-- root/root 82067 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/display.ent -rw-r--r-- root/root 1655 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eInfo_020511.dtd -rw-r--r-- root/root 2299 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eLink_090910.dtd -rw-r--r-- root/root 2447 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eLink_101123.dtd -rw-r--r-- root/root 520 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/ePost_020511.dtd -rw-r--r-- root/root 2392 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eSearch_020511.dtd -rw-r--r-- root/root 736 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eSpell.dtd -rw-r--r-- root/root 602 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eSummary_041029.dtd -rw-r--r-- root/root 851 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/egquery.dtd -rw-r--r-- root/root 1715 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/einfo.dtd -rw-r--r-- root/root 466 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/elink_020122.dtd -rw-r--r-- root/root 3337 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/esearch.dtd -rw-r--r-- root/root 603 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/esummary-v1.dtd -rw-r--r-- root/root 22746 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/format.ent -rw-r--r-- root/root 9849 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/htmltable.dtd -rw-r--r-- root/root 11589 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamsa.ent -rw-r--r-- root/root 9556 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamsb.ent -rw-r--r-- root/root 2254 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamsc.ent -rw-r--r-- root/root 7945 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamsn.ent -rw-r--r-- root/root 4432 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamso.ent -rw-r--r-- root/root 14133 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isoamsr.ent -rw-r--r-- root/root 3507 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isobox.ent -rw-r--r-- root/root 5257 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isocyr1.ent -rw-r--r-- root/root 2457 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isocyr2.ent -rw-r--r-- root/root 1473 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isodia.ent -rw-r--r-- root/root 4102 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isogrk1.ent -rw-r--r-- root/root 2389 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isogrk2.ent -rw-r--r-- root/root 3699 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isogrk3.ent -rw-r--r-- root/root 3591 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isogrk4.ent -rw-r--r-- root/root 5199 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isolat1.ent -rw-r--r-- root/root 8865 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isolat2.ent -rw-r--r-- root/root 4478 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isomfrk.ent -rw-r--r-- root/root 2522 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isomopf.ent -rw-r--r-- root/root 4557 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isomscr.ent -rw-r--r-- root/root 5816 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isonum.ent -rw-r--r-- root/root 6594 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isopub.ent -rw-r--r-- root/root 12399 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isotech.ent -rw-r--r-- root/root 18988 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/journalmeta.ent -rw-r--r-- root/root 28360 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/link.ent -rw-r--r-- root/root 25663 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/list.ent -rw-r--r-- root/root 18334 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/math.ent -rw-r--r-- root/root 6820 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml-in-pubmed.mod lrwxrwxrwx root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml2.dtd -> ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd -rw-r--r-- root/root 12255 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml3-qname1.mod -rw-r--r-- root/root 42407 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathml3.dtd -rw-r--r-- root/root 10452 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mathmlsetup.ent -rw-r--r-- root/root 37695 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mmlalias.ent -rw-r--r-- root/root 7776 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mmlextra.ent -rw-r--r-- root/root 21313 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/modules.ent -rw-r--r-- root/root 4465 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -rw-r--r-- root/root 12369 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -rw-r--r-- root/root 5839 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmcommon_011101.dtd -rw-r--r-- root/root 7946 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmcommon_080101.dtd -rw-r--r-- root/root 8638 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmcommon_090101.dtd -rw-r--r-- root/root 2053 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedline_011101.dtd -rw-r--r-- root/root 3017 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedline_080101.dtd -rw-r--r-- root/root 3195 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedline_090101.dtd -rw-r--r-- root/root 6760 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -rw-r--r-- root/root 5001 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -rw-r--r-- root/root 5262 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -rw-r--r-- root/root 9322 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -rw-r--r-- root/root 9618 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -rw-r--r-- root/root 9308 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -rw-r--r-- root/root 8829 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -rw-r--r-- root/root 8995 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -rw-r--r-- root/root 9033 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -rw-r--r-- root/root 9112 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -rw-r--r-- root/root 8947 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -rw-r--r-- root/root 5672 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmserials_080101.dtd -rw-r--r-- root/root 6703 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmserials_100101.dtd -rw-r--r-- root/root 3185 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -rw-r--r-- root/root 3317 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -rw-r--r-- root/root 9656 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/notat.ent -rw-r--r-- root/root 23807 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/para.ent -rw-r--r-- root/root 15750 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/phrase.ent -rw-r--r-- root/root 25142 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pmc-1.dtd -rw-r--r-- root/root 2714 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_020114.dtd -rw-r--r-- root/root 3045 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_080101.dtd -rw-r--r-- root/root 3059 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_090101.dtd -rw-r--r-- root/root 3126 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_100101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_100301.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_110101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_120101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_130101.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_130501.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_140101.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_150101.dtd -rw-r--r-- root/root 13062 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_180101.dtd -rw-r--r-- root/root 13869 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_180601.dtd -rw-r--r-- root/root 14576 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_190101.dtd -rw-r--r-- root/root 40015 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/references.ent -rw-r--r-- root/root 13173 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/section.ent -rw-r--r-- root/root 4003 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/taxon.dtd -rw-r--r-- root/root 13595 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/xmlspecchars.ent -rw-r--r-- root/root 32942 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/Parser.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs/ -rw-r--r-- root/root 3536 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/XSDs/IPGReportSet.xsd -rw-r--r-- root/root 22292 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Entrez/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/ -rw-r--r-- root/root 4550 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/Enzyme.py -rw-r--r-- root/root 5030 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/Prodoc.py -rw-r--r-- root/root 11747 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/Prosite.py -rw-r--r-- root/root 4430 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/ScanProsite.py -rw-r--r-- root/root 3648 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/__init__.py -rw-r--r-- root/root 5144 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/cellosaurus.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/FSSP/ -rw-r--r-- root/root 4090 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/FSSP/FSSPTools.py -rw-r--r-- root/root 9515 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/FSSP/__init__.py -rw-r--r-- root/root 1191 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/FSSP/fssp_rec.py -rw-r--r-- root/root 33540 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/File.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/GenBank/ -rw-r--r-- root/root 23618 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/GenBank/Record.py -rw-r--r-- root/root 100299 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/GenBank/Scanner.py -rw-r--r-- root/root 62908 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/GenBank/__init__.py -rw-r--r-- root/root 1905 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/GenBank/utils.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Geo/ -rw-r--r-- root/root 2983 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Geo/Record.py -rw-r--r-- root/root 2028 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Geo/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Graphics/ -rw-r--r-- root/root 31462 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/BasicChromosome.py -rw-r--r-- root/root 7364 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/ColorSpiral.py -rw-r--r-- root/root 6468 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/Comparative.py -rw-r--r-- root/root 6969 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/DisplayRepresentation.py -rw-r--r-- root/root 9614 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/Distribution.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/ -rw-r--r-- root/root 18981 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -rw-r--r-- root/root 66085 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -rw-r--r-- root/root 9684 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py -rw-r--r-- root/root 3330 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py -rw-r--r-- root/root 16139 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py -rw-r--r-- root/root 8110 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py -rw-r--r-- root/root 8683 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py -rw-r--r-- root/root 6908 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py -rw-r--r-- root/root 6182 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py -rw-r--r-- root/root 60415 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -rw-r--r-- root/root 12994 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py -rw-r--r-- root/root 1148 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py -rw-r--r-- root/root 17246 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/KGML_vis.py -rw-r--r-- root/root 3354 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Graphics/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/HMM/ -rw-r--r-- root/root 12877 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/HMM/DynamicProgramming.py -rw-r--r-- root/root 26715 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/HMM/MarkovModel.py -rw-r--r-- root/root 16990 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/HMM/Trainer.py -rw-r--r-- root/root 2174 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/HMM/Utilities.py -rw-r--r-- root/root 352 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/HMM/__init__.py -rw-r--r-- root/root 5055 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Index.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KDTree/ -rw-r--r-- root/root 29625 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.c -rw-r--r-- root/root 720 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.h -rw-r--r-- root/root 5323 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/KDTree.py -rw-r--r-- root/root 20001 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/KDTreemodule.c -rw-r--r-- root/root 151 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/Neighbor.h -rw-r--r-- root/root 32408 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.x86_64-linux-gnu.so -rw-r--r-- root/root 735 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KDTree/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/ -rw-r--r-- root/root 5699 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/ -rw-r--r-- root/root 11747 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/ -rw-r--r-- root/root 4418 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Gene/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/ -rw-r--r-- root/root 6458 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_parser.py -rw-r--r-- root/root 28206 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/KGML_pathway.py -rw-r--r-- root/root 446 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/KGML/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Map/ -rw-r--r-- root/root 1536 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Map/__init__.py -rw-r--r-- root/root 10835 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/REST.py -rw-r--r-- root/root 2724 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/KEGG/__init__.py -rw-r--r-- root/root 4363 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/LogisticRegression.py -rw-r--r-- root/root 23762 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/MarkovModel.py -rw-r--r-- root/root 10813 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/MaxEntropy.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Medline/ -rw-r--r-- root/root 5348 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Medline/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/NMR/ -rw-r--r-- root/root 3421 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/NMR/NOEtools.py -rw-r--r-- root/root 332 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/NMR/__init__.py -rw-r--r-- root/root 9632 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/NMR/xpktools.py -rw-r--r-- root/root 7893 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/NaiveBayes.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Nexus/ -rw-r--r-- root/root 81831 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/Nexus.py -rw-r--r-- root/root 5568 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/Nodes.py -rw-r--r-- root/root 4031 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/StandardData.py -rw-r--r-- root/root 38456 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/Trees.py -rw-r--r-- root/root 249 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/__init__.py -rw-r--r-- root/root 3756 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.c -rw-r--r-- root/root 14424 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.x86_64-linux-gnu.so drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PDB/ -rw-r--r-- root/root 3838 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/AbstractPropertyMap.py -rw-r--r-- root/root 14488 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Atom.py -rw-r--r-- root/root 5174 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Chain.py -rw-r--r-- root/root 18765 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.py -rw-r--r-- root/root 2449 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Dice.py -rw-r--r-- root/root 13468 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Entity.py -rw-r--r-- root/root 9152 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.py -rw-r--r-- root/root 11300 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.py -rw-r--r-- root/root 4576 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.py -rw-r--r-- root/root 18416 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/MMCIFParser.py -rw-r--r-- root/root 1413 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Model.py -rw-r--r-- root/root 7328 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.py -rw-r--r-- root/root 4934 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.py -rw-r--r-- root/root 692 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.py -rw-r--r-- root/root 8675 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.py -rw-r--r-- root/root 21538 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.py -rw-r--r-- root/root 13482 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.py -rw-r--r-- root/root 2963 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/PSEA.py -rw-r--r-- root/root 14006 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/ -rw-r--r-- root/root 5053 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py -rw-r--r-- root/root 14424 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprot.x86_64-linux-gnu.so -rw-r--r-- root/root 9289 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.c -rw-r--r-- root/root 5331 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Residue.py -rw-r--r-- root/root 22852 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/ResidueDepth.py -rw-r--r-- root/root 2501 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Selection.py -rw-r--r-- root/root 1239 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Structure.py -rw-r--r-- root/root 3159 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.py -rw-r--r-- root/root 11035 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.py -rw-r--r-- root/root 1923 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Superimposer.py -rw-r--r-- root/root 1608 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/Vector.py -rw-r--r-- root/root 2132 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/__init__.py -rw-r--r-- root/root 43059 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.c -rw-r--r-- root/root 26864 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PDB/kdtrees.x86_64-linux-gnu.so -rw-r--r-- root/root 15461 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/mmcifio.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/ -rw-r--r-- root/root 8862 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/DefaultParser.py -rw-r--r-- root/root 1543 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/mmtf/__init__.py -rw-r--r-- root/root 8880 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/parse_pdb_header.py -rw-r--r-- root/root 9698 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PDB/vectors.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Pathway/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/ -rw-r--r-- root/root 5910 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/Graph.py -rw-r--r-- root/root 6796 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py -rw-r--r-- root/root 505 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/__init__.py -rw-r--r-- root/root 10935 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Pathway/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Phylo/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/ -rw-r--r-- root/root 27386 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py -rw-r--r-- root/root 10305 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Phyml.py -rw-r--r-- root/root 20490 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Raxml.py -rw-r--r-- root/root 557 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/__init__.py -rw-r--r-- root/root 46359 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/BaseTree.py -rw-r--r-- root/root 1562 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/CDAO.py -rw-r--r-- root/root 15783 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/CDAOIO.py -rw-r--r-- root/root 23764 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Consensus.py -rw-r--r-- root/root 1314 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NeXML.py -rw-r--r-- root/root 11387 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NeXMLIO.py -rw-r--r-- root/root 1198 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Newick.py -rw-r--r-- root/root 12633 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NewickIO.py -rw-r--r-- root/root 2583 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NexusIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/ -rw-r--r-- root/root 316 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/__init__.py -rw-r--r-- root/root 5010 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_paml.py -rw-r--r-- root/root 11269 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py -rw-r--r-- root/root 21779 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py -rw-r--r-- root/root 6550 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py -rw-r--r-- root/root 8516 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/baseml.py -rw-r--r-- root/root 3392 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/chi2.py -rw-r--r-- root/root 9226 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/codeml.py -rw-r--r-- root/root 5624 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/yn00.py -rw-r--r-- root/root 48449 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXML.py -rw-r--r-- root/root 33559 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXMLIO.py -rw-r--r-- root/root 41830 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/TreeConstruction.py -rw-r--r-- root/root 459 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/__init__.py -rw-r--r-- root/root 109134 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_cdao_owl.py -rw-r--r-- root/root 2588 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_io.py -rw-r--r-- root/root 22108 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_utils.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PopGen/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/ -rw-r--r-- root/root 33259 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Controller.py -rw-r--r-- root/root 6844 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/EasyController.py -rw-r--r-- root/root 11780 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/FileParser.py -rw-r--r-- root/root 3842 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py -rw-r--r-- root/root 494 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/Utils.py -rw-r--r-- root/root 7324 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/GenePop/__init__.py -rw-r--r-- root/root 290 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/PopGen/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Restriction/ -rw-r--r-- root/root 14733 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Restriction/PrintFormat.py -rw-r--r-- root/root 2524 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Restriction/RanaConfig.py -rw-r--r-- root/root 85902 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction.py -rw-r--r-- root/root 507861 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Restriction/Restriction_Dictionary.py -rw-r--r-- root/root 8713 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Restriction/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SCOP/ -rw-r--r-- root/root 3844 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Cla.py -rw-r--r-- root/root 2935 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Des.py -rw-r--r-- root/root 2401 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Dom.py -rw-r--r-- root/root 2918 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Hie.py -rw-r--r-- root/root 10255 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Raf.py -rw-r--r-- root/root 3010 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/Residues.py -rw-r--r-- root/root 32134 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SCOP/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/ -rw-r--r-- root/root 6178 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/ -rw-r--r-- root/root 23896 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py -rw-r--r-- root/root 34616 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py -rw-r--r-- root/root 5905 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py -rw-r--r-- root/root 37975 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py -rw-r--r-- root/root 31796 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/ -rw-r--r-- root/root 12964 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py -rw-r--r-- root/root 20082 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py -rw-r--r-- root/root 4126 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -rw-r--r-- root/root 20570 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py -rw-r--r-- root/root 8304 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -rw-r--r-- root/root 26132 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/ -rw-r--r-- root/root 20291 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py -rw-r--r-- root/root 1509 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py -rw-r--r-- root/root 12743 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py -rw-r--r-- root/root 13575 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -rw-r--r-- root/root 12902 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py -rw-r--r-- root/root 18935 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/ -rw-r--r-- root/root 5073 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py -rw-r--r-- root/root 8085 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py -rw-r--r-- root/root 29359 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.py -rw-r--r-- root/root 1288 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ -rw-r--r-- root/root 75071 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py -rw-r--r-- root/root 8539 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py -rw-r--r-- root/root 313 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_legacy/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/ -rw-r--r-- root/root 2463 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.py -rw-r--r-- root/root 2643 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.py -rw-r--r-- root/root 17462 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.py -rw-r--r-- root/root 49629 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.py -rw-r--r-- root/root 31885 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.py -rw-r--r-- root/root 4951 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.py -rw-r--r-- root/root 108503 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Seq.py -rw-r--r-- root/root 75153 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqFeature.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/ -rw-r--r-- root/root 25742 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/AbiIO.py -rw-r--r-- root/root 4659 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/AceIO.py -rw-r--r-- root/root 13837 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/FastaIO.py -rw-r--r-- root/root 3880 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/IgIO.py -rw-r--r-- root/root 53432 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/InsdcIO.py -rw-r--r-- root/root 9021 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/Interfaces.py -rw-r--r-- root/root 19595 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/PdbIO.py -rw-r--r-- root/root 6169 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/PhdIO.py -rw-r--r-- root/root 10602 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/PirIO.py -rw-r--r-- root/root 78388 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/QualityIO.py -rw-r--r-- root/root 16799 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/SeqXmlIO.py -rw-r--r-- root/root 55367 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/SffIO.py -rw-r--r-- root/root 6721 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/SwissIO.py -rw-r--r-- root/root 4490 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/TabIO.py -rw-r--r-- root/root 25938 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/UniprotIO.py -rw-r--r-- root/root 44842 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/__init__.py -rw-r--r-- root/root 16146 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/_convert.py -rw-r--r-- root/root 28076 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/_index.py -rw-r--r-- root/root 53367 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqRecord.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/ -rw-r--r-- root/root 4117 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CheckSum.py -rw-r--r-- root/root 6710 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsage.py -rw-r--r-- root/root 1304 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py -rw-r--r-- root/root 4696 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py -rw-r--r-- root/root 44700 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/MeltingTemp.py -rw-r--r-- root/root 12636 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParam.py -rw-r--r-- root/root 8107 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParamData.py -rw-r--r-- root/root 17772 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/__init__.py -rw-r--r-- root/root 6014 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/lcc.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/ -rw-r--r-- root/root 19666 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/ -rw-r--r-- root/root 8295 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py -rw-r--r-- root/root 2032 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.py -rw-r--r-- root/root 26672 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_bwa.py -rw-r--r-- root/root 33680 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_samtools.py -rw-r--r-- root/root 4794 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.py -rw-r--r-- root/root 412 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Statistics/ -rw-r--r-- root/root 330 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Statistics/__init__.py -rw-r--r-- root/root 3843 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Statistics/lowess.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/ -rw-r--r-- root/root 2525 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/FreqTable.py -rw-r--r-- root/root 185972 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/MatrixInfo.py -rw-r--r-- root/root 24551 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/SwissProt/ -rw-r--r-- root/root 3298 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SwissProt/KeyWList.py -rw-r--r-- root/root 23013 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/SwissProt/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/TogoWS/ -rw-r--r-- root/root 13820 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/TogoWS/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/UniGene/ -rw-r--r-- root/root 12373 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/UniGene/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/UniProt/ -rw-r--r-- root/root 14268 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/UniProt/GOA.py -rw-r--r-- root/root 582 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/UniProt/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/Wise/ -rw-r--r-- root/root 4943 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Wise/__init__.py -rw-r--r-- root/root 4591 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Wise/dnal.py -rw-r--r-- root/root 4041 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/Wise/psw.py -rw-r--r-- root/root 3744 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/_py3k/ -rw-r--r-- root/root 7425 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/_py3k/__init__.py -rw-r--r-- root/root 3635 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/_utils.py -rw-r--r-- root/root 35695 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/bgzf.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/codonalign/ -rw-r--r-- root/root 32989 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/codonalign/__init__.py -rw-r--r-- root/root 3296 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/codonalign/chisq.py -rw-r--r-- root/root 17008 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/codonalign/codonalignment.py -rw-r--r-- root/root 1467 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/codonalign/codonalphabet.py -rw-r--r-- root/root 50963 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/codonalign/codonseq.py -rw-r--r-- root/root 18680 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/cpairwise2.x86_64-linux-gnu.so -rw-r--r-- root/root 16026 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/cpairwise2module.c -rw-r--r-- root/root 4197 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/kNN.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/motifs/ -rw-r--r-- root/root 19073 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/__init__.py -rw-r--r-- root/root 5614 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.c -rw-r--r-- root/root 14680 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.x86_64-linux-gnu.so -rw-r--r-- root/root 2096 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/alignace.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/ -rw-r--r-- root/root 352 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.py -rw-r--r-- root/root 9614 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/ -rw-r--r-- root/root 11383 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.py -rw-r--r-- root/root 27692 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.py -rw-r--r-- root/root 5005 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/mast.py -rw-r--r-- root/root 21226 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/matrix.py -rw-r--r-- root/root 11995 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/meme.py -rw-r--r-- root/root 5347 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/minimal.py -rw-r--r-- root/root 4490 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/thresholds.py -rw-r--r-- root/root 11868 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/motifs/transfac.py -rw-r--r-- root/root 45456 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/pairwise2.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/phenotype/ -rw-r--r-- root/root 8494 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/phenotype/__init__.py -rw-r--r-- root/root 37238 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/phenotype/phen_micro.py -rw-r--r-- root/root 3935 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/phenotype/pm_fitting.py -rw-r--r-- root/root 22648 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/trie.c -rw-r--r-- root/root 4136 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/trie.h -rw-r--r-- root/root 32640 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/Bio/trie.x86_64-linux-gnu.so -rw-r--r-- root/root 3694 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/triefind.py -rw-r--r-- root/root 20784 2018-12-18 12:44 ./usr/lib/python2.7/dist-packages/Bio/triemodule.c drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/ -rw-r--r-- root/root 15892 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/PKG-INFO -rw-r--r-- root/root 1 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/dependency_links.txt -rw-r--r-- root/root 0 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/requires.txt -rw-r--r-- root/root 11 2019-03-04 19:21 ./usr/lib/python2.7/dist-packages/biopython-1.73.egg-info/top_level.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python-biopython/ -rw-r--r-- root/root 4361 2018-12-18 12:44 ./usr/share/doc/python-biopython/CONTRIB.rst.gz -rw-r--r-- root/root 1922 2018-12-18 12:44 ./usr/share/doc/python-biopython/CONTRIBUTING.rst.gz -rw-r--r-- root/root 8271 2018-12-18 12:44 ./usr/share/doc/python-biopython/DEPRECATED.rst.gz -rw-r--r-- root/root 31152 2018-12-18 12:44 ./usr/share/doc/python-biopython/NEWS.rst.gz -rw-r--r-- root/root 273 2019-01-11 22:23 ./usr/share/doc/python-biopython/README.Debian -rw-r--r-- root/root 1326 2019-03-04 19:21 ./usr/share/doc/python-biopython/changelog.Debian.gz -rw-r--r-- root/root 2038 2019-01-11 22:23 ./usr/share/doc/python-biopython/copyright python3-biopython-sql_1.73+dfsg-1ubuntu1_all.deb ------------------------------------------------ new debian package, version 2.0. size 26412 bytes: control archive=1180 bytes. 706 bytes, 17 lines control 496 bytes, 6 lines md5sums 268 bytes, 12 lines * postinst #!/bin/sh 417 bytes, 12 lines * prerm #!/bin/sh Package: python3-biopython-sql Source: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: all Maintainer: Ubuntu Developers Installed-Size: 138 Depends: python3:any, python3-biopython Section: python Priority: optional Homepage: http://biopython.org Description: Biopython support for the BioSQL database schema (Python 3) This is the Biopython interface to a BioSQL database (see www.biosql.org for details). BioPerl, BioJava and BioRuby also provide their own BioSQL interfaces onto the same shared SQL schema. . This package is targeting Python version 3. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2019-03-04 19:21 ./ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/BioSQL/ -rw-r--r-- root/root 24833 2018-12-18 12:44 ./usr/lib/python3/dist-packages/BioSQL/BioSeq.py -rw-r--r-- root/root 35509 2018-12-18 12:44 ./usr/lib/python3/dist-packages/BioSQL/BioSeqDatabase.py -rw-r--r-- root/root 4669 2018-12-18 12:44 ./usr/lib/python3/dist-packages/BioSQL/DBUtils.py -rw-r--r-- root/root 52384 2018-12-18 12:44 ./usr/lib/python3/dist-packages/BioSQL/Loader.py -rw-r--r-- root/root 617 2018-12-18 12:44 ./usr/lib/python3/dist-packages/BioSQL/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python3-biopython-sql/ lrwxrwxrwx root/root 0 2019-03-04 19:21 ./usr/share/doc/python3-biopython-sql/changelog.Debian.gz -> ../python3-biopython/changelog.Debian.gz -rw-r--r-- root/root 2038 2019-01-11 22:23 ./usr/share/doc/python3-biopython-sql/copyright python3-biopython_1.73+dfsg-1ubuntu1_amd64.deb ---------------------------------------------- new debian package, version 2.0. size 1283076 bytes: control archive=15792 bytes. 1569 bytes, 28 lines control 54825 bytes, 586 lines md5sums 260 bytes, 12 lines * postinst #!/bin/sh 409 bytes, 12 lines * prerm #!/bin/sh Package: python3-biopython Source: python-biopython Version: 1.73+dfsg-1ubuntu1 Architecture: amd64 Maintainer: Ubuntu Developers Installed-Size: 8928 Depends: python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.7~), python3:any, libc6 (>= 2.14), python3-reportlab Recommends: python-biopython-doc (= 1.73+dfsg-1ubuntu1), ncbi-blast+ Suggests: python3-tk, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle, phylip, phyml, prank, probcons, python3-mysqldb, python3-matplotlib, python3-pil, python3-rdflib, python3-renderpm, python3-psycopg2, python3-scipy, raxml, samtools, t-coffee, wise (>= 2.4.1-16), w3-dtd-mathml Section: python Priority: optional Homepage: http://biopython.org Description: Python library for bioinformatics (implemented in Python 3) The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. . This package is targeting Python version 3. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2019-03-04 19:21 ./ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Affy/ -rw-r--r-- root/root 13805 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Affy/CelFile.py -rw-r--r-- root/root 296 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Affy/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Align/ -rw-r--r-- root/root 31593 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/AlignInfo.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Align/Applications/ -rw-r--r-- root/root 9672 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_ClustalOmega.py -rw-r--r-- root/root 19806 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Clustalw.py -rw-r--r-- root/root 9712 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Dialign.py -rw-r--r-- root/root 3402 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_MSAProbs.py -rw-r--r-- root/root 19365 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Mafft.py -rw-r--r-- root/root 34439 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Muscle.py -rw-r--r-- root/root 10603 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Prank.py -rw-r--r-- root/root 5141 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_Probcons.py -rw-r--r-- root/root 4698 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/_TCoffee.py -rw-r--r-- root/root 1097 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/Applications/__init__.py -rw-r--r-- root/root 50831 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/__init__.py -rw-r--r-- root/root 199373 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Align/_aligners.c -rw-r--r-- root/root 97256 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Align/_aligners.cpython-37m-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/AlignIO/ -rw-r--r-- root/root 12056 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/ClustalIO.py -rw-r--r-- root/root 9691 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/EmbossIO.py -rw-r--r-- root/root 14676 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/FastaIO.py -rw-r--r-- root/root 6242 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/Interfaces.py -rw-r--r-- root/root 33318 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/MafIO.py -rw-r--r-- root/root 12951 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/MauveIO.py -rw-r--r-- root/root 5672 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/NexusIO.py -rw-r--r-- root/root 17335 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/PhylipIO.py -rw-r--r-- root/root 27272 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/StockholmIO.py -rw-r--r-- root/root 20238 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/AlignIO/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Alphabet/ -rw-r--r-- root/root 3255 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Alphabet/IUPAC.py -rw-r--r-- root/root 7418 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Alphabet/Reduced.py -rw-r--r-- root/root 15722 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Alphabet/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Application/ -rw-r--r-- root/root 31489 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Application/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Blast/ -rw-r--r-- root/root 64429 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/Applications.py -rw-r--r-- root/root 11874 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/NCBIWWW.py -rw-r--r-- root/root 24234 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/NCBIXML.py -rw-r--r-- root/root 3896 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/ParseBlastTable.py -rw-r--r-- root/root 14988 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/Record.py -rw-r--r-- root/root 350 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Blast/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/CAPS/ -rw-r--r-- root/root 4061 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/CAPS/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Cluster/ -rw-r--r-- root/root 48398 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Cluster/__init__.py -rw-r--r-- root/root 109592 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 144605 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Cluster/cluster.c -rw-r--r-- root/root 4181 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Cluster/cluster.h -rw-r--r-- root/root 77609 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Cluster/clustermodule.c drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Compass/ -rw-r--r-- root/root 7046 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Compass/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Crystal/ -rw-r--r-- root/root 8735 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Crystal/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Data/ -rw-r--r-- root/root 55366 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Data/CodonTable.py -rw-r--r-- root/root 9461 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Data/IUPACData.py -rw-r--r-- root/root 17202 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Data/SCOPData.py -rw-r--r-- root/root 353 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Data/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Emboss/ -rw-r--r-- root/root 57560 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Emboss/Applications.py -rw-r--r-- root/root 5594 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Emboss/Primer3.py -rw-r--r-- root/root 2542 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Emboss/PrimerSearch.py -rw-r--r-- root/root 355 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Emboss/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Entrez/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/ -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_0.dtd -rw-r--r-- root/root 33675 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_1.dtd -rw-r--r-- root/root 33691 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_2.dtd -rw-r--r-- root/root 36007 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_3.dtd -rw-r--r-- root/root 41304 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -rw-r--r-- root/root 660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.dtd -rw-r--r-- root/root 41537 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -rw-r--r-- root/root 792 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/EMBL_General.dtd -rw-r--r-- root/root 2871 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/EMBL_General.mod.dtd -rw-r--r-- root/root 807 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/GenBank_General.dtd -rw-r--r-- root/root 1743 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/GenBank_General.mod.dtd -rw-r--r-- root/root 3500 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/HomoloGene.dtd -rw-r--r-- root/root 6460 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/HomoloGene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -rw-r--r-- root/root 14705 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -rw-r--r-- root/root 3893 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB.dtd -rw-r--r-- root/root 9382 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB.mod.dtd -rw-r--r-- root/root 3908 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -rw-r--r-- root/root 17213 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -rw-r--r-- root/root 3902 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Features.dtd -rw-r--r-- root/root 28680 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -rw-r--r-- root/root 3910 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -rw-r--r-- root/root 25075 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -rw-r--r-- root/root 665 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Access.dtd -rw-r--r-- root/root 1221 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -rw-r--r-- root/root 785 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Biblio.dtd -rw-r--r-- root/root 15918 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -rw-r--r-- root/root 925 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BioSource.dtd -rw-r--r-- root/root 4641 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BioTree.dtd -rw-r--r-- root/root 2444 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -rw-r--r-- root/root 3740 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Blast4.dtd -rw-r--r-- root/root 39597 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -rw-r--r-- root/root 3507 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -rw-r--r-- root/root 4281 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -rw-r--r-- root/root 692 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -rw-r--r-- root/root 6579 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -rw-r--r-- root/root 4347 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Cdd.dtd -rw-r--r-- root/root 28292 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -rw-r--r-- root/root 4005 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -rw-r--r-- root/root 16758 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -rw-r--r-- root/root 410 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -rw-r--r-- root/root 21922 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -rw-r--r-- root/root 3525 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -rw-r--r-- root/root 10316 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -rw-r--r-- root/root 2358 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -rw-r--r-- root/root 659 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -rw-r--r-- root/root 11502 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -rw-r--r-- root/root 776 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Gene.dtd -rw-r--r-- root/root 2381 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_General.dtd -rw-r--r-- root/root 8215 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_General.mod.dtd -rw-r--r-- root/root 3629 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -rw-r--r-- root/root 5733 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -rw-r--r-- root/root 3757 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -rw-r--r-- root/root 23205 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -rw-r--r-- root/root 1378 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -rw-r--r-- root/root 6931 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -rw-r--r-- root/root 907 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Medlars.dtd -rw-r--r-- root/root 1617 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -rw-r--r-- root/root 907 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Medline.dtd -rw-r--r-- root/root 5757 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -rw-r--r-- root/root 647 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Mim.dtd -rw-r--r-- root/root 8395 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -rw-r--r-- root/root 4461 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Mime.dtd -rw-r--r-- root/root 7270 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -rw-r--r-- root/root 665 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -rw-r--r-- root/root 3131 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -rw-r--r-- root/root 796 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.dtd -rw-r--r-- root/root 5250 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -rw-r--r-- root/root 1519 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -rw-r--r-- root/root 31800 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -rw-r--r-- root/root 1155 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -rw-r--r-- root/root 43623 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -rw-r--r-- root/root 3736 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Project.dtd -rw-r--r-- root/root 3769 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -rw-r--r-- root/root 791 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Protein.dtd -rw-r--r-- root/root 1791 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -rw-r--r-- root/root 1003 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Pub.dtd -rw-r--r-- root/root 2700 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -rw-r--r-- root/root 1021 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PubMed.dtd -rw-r--r-- root/root 1698 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -rw-r--r-- root/root 3383 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_RNA.dtd -rw-r--r-- root/root 3379 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -rw-r--r-- root/root 3495 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Remap.dtd -rw-r--r-- root/root 4064 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -rw-r--r-- root/root 781 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Rsite.dtd -rw-r--r-- root/root 1044 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -rw-r--r-- root/root 3629 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -rw-r--r-- root/root 19503 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -rw-r--r-- root/root 671 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -rw-r--r-- root/root 4231 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -rw-r--r-- root/root 9912 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -rw-r--r-- root/root 3634 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -rw-r--r-- root/root 11475 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -rw-r--r-- root/root 15026 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -rw-r--r-- root/root 3387 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -rw-r--r-- root/root 19204 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -rw-r--r-- root/root 3385 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -rw-r--r-- root/root 7383 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -rw-r--r-- root/root 3385 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqres.dtd -rw-r--r-- root/root 3149 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -rw-r--r-- root/root 3501 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqset.dtd -rw-r--r-- root/root 3479 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -rw-r--r-- root/root 3384 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Sequence.dtd -rw-r--r-- root/root 26293 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -rw-r--r-- root/root 3617 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Submit.dtd -rw-r--r-- root/root 4130 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -rw-r--r-- root/root 3379 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Systems.dtd -rw-r--r-- root/root 656 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_TSeq.dtd -rw-r--r-- root/root 1660 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -rw-r--r-- root/root 1138 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_TxInit.dtd -rw-r--r-- root/root 4625 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -rw-r--r-- root/root 3389 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Variation.dtd -rw-r--r-- root/root 27155 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -rw-r--r-- root/root 7893 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NCBI_all.dtd -rw-r--r-- root/root 625 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NSE.dtd -rw-r--r-- root/root 26853 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/NSE.mod.dtd -rw-r--r-- root/root 3470 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/OMSSA.dtd -rw-r--r-- root/root 34917 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/OMSSA.mod.dtd -rw-r--r-- root/root 787 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PDB_General.dtd -rw-r--r-- root/root 1815 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PDB_General.mod.dtd -rw-r--r-- root/root 3387 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PIR_General.dtd -rw-r--r-- root/root 2076 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PIR_General.mod.dtd -rw-r--r-- root/root 667 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PRF_General.dtd -rw-r--r-- root/root 1535 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/PRF_General.mod.dtd -rw-r--r-- root/root 3386 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/SP_General.dtd -rw-r--r-- root/root 2375 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/SP_General.mod.dtd -rw-r--r-- root/root 17329 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/XHTMLtablesetup.ent -rw-r--r-- root/root 51298 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/archivearticle.dtd -rw-r--r-- root/root 8304 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/archivecustom-classes.ent -rw-r--r-- root/root 16646 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/archivecustom-mixes.ent -rw-r--r-- root/root 38921 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/archivecustom-models.ent -rw-r--r-- root/root 6412 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/archivecustom-modules.ent -rw-r--r-- root/root 98004 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/articlemeta.ent -rw-r--r-- root/root 15090 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/backmatter.ent -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_100301.dtd -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_110101.dtd -rw-r--r-- root/root 2645 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_120101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_130101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_140101.dtd -rw-r--r-- root/root 2756 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/bookdoc_150101.dtd -rw-r--r-- root/root 21412 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/chars.ent -rw-r--r-- root/root 152388 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/common.ent -rw-r--r-- root/root 33182 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/default-classes.ent -rw-r--r-- root/root 19402 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/default-mixes.ent -rw-r--r-- root/root 82067 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/display.ent -rw-r--r-- root/root 1655 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eInfo_020511.dtd -rw-r--r-- root/root 2299 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eLink_090910.dtd -rw-r--r-- root/root 2447 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eLink_101123.dtd -rw-r--r-- root/root 520 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/ePost_020511.dtd -rw-r--r-- root/root 2392 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eSearch_020511.dtd -rw-r--r-- root/root 736 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eSpell.dtd -rw-r--r-- root/root 602 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/eSummary_041029.dtd -rw-r--r-- root/root 851 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/egquery.dtd -rw-r--r-- root/root 1715 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/einfo.dtd -rw-r--r-- root/root 466 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/elink_020122.dtd -rw-r--r-- root/root 3337 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/esearch.dtd -rw-r--r-- root/root 603 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/esummary-v1.dtd -rw-r--r-- root/root 22746 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/format.ent -rw-r--r-- root/root 9849 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/htmltable.dtd -rw-r--r-- root/root 11589 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamsa.ent -rw-r--r-- root/root 9556 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamsb.ent -rw-r--r-- root/root 2254 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamsc.ent -rw-r--r-- root/root 7945 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamsn.ent -rw-r--r-- root/root 4432 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamso.ent -rw-r--r-- root/root 14133 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isoamsr.ent -rw-r--r-- root/root 3507 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isobox.ent -rw-r--r-- root/root 5257 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isocyr1.ent -rw-r--r-- root/root 2457 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isocyr2.ent -rw-r--r-- root/root 1473 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isodia.ent -rw-r--r-- root/root 4102 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isogrk1.ent -rw-r--r-- root/root 2389 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isogrk2.ent -rw-r--r-- root/root 3699 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isogrk3.ent -rw-r--r-- root/root 3591 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isogrk4.ent -rw-r--r-- root/root 5199 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isolat1.ent -rw-r--r-- root/root 8865 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isolat2.ent -rw-r--r-- root/root 4478 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isomfrk.ent -rw-r--r-- root/root 2522 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isomopf.ent -rw-r--r-- root/root 4557 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isomscr.ent -rw-r--r-- root/root 5816 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isonum.ent -rw-r--r-- root/root 6594 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isopub.ent -rw-r--r-- root/root 12399 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/isotech.ent -rw-r--r-- root/root 18988 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/journalmeta.ent -rw-r--r-- root/root 28360 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/link.ent -rw-r--r-- root/root 25663 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/list.ent -rw-r--r-- root/root 18334 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/math.ent -rw-r--r-- root/root 6820 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml-in-pubmed.mod lrwxrwxrwx root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd -> ../../../../../../share/xml/schema/w3c/mathml/dtd/mathml2.dtd -rw-r--r-- root/root 12255 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml3-qname1.mod -rw-r--r-- root/root 42407 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml3.dtd -rw-r--r-- root/root 10452 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathmlsetup.ent -rw-r--r-- root/root 37695 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mmlalias.ent -rw-r--r-- root/root 7776 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mmlextra.ent -rw-r--r-- root/root 21313 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/modules.ent -rw-r--r-- root/root 4465 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -rw-r--r-- root/root 12369 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -rw-r--r-- root/root 5839 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmcommon_011101.dtd -rw-r--r-- root/root 7946 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmcommon_080101.dtd -rw-r--r-- root/root 8638 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmcommon_090101.dtd -rw-r--r-- root/root 2053 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedline_011101.dtd -rw-r--r-- root/root 3017 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedline_080101.dtd -rw-r--r-- root/root 3195 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedline_090101.dtd -rw-r--r-- root/root 6760 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -rw-r--r-- root/root 5001 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -rw-r--r-- root/root 5262 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -rw-r--r-- root/root 9322 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -rw-r--r-- root/root 9618 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -rw-r--r-- root/root 9308 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -rw-r--r-- root/root 8829 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -rw-r--r-- root/root 8995 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -rw-r--r-- root/root 9033 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -rw-r--r-- root/root 9112 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -rw-r--r-- root/root 8947 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -rw-r--r-- root/root 5672 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmserials_080101.dtd -rw-r--r-- root/root 6703 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmserials_100101.dtd -rw-r--r-- root/root 3185 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -rw-r--r-- root/root 3317 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -rw-r--r-- root/root 9656 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/notat.ent -rw-r--r-- root/root 23807 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/para.ent -rw-r--r-- root/root 15750 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/phrase.ent -rw-r--r-- root/root 25142 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pmc-1.dtd -rw-r--r-- root/root 2714 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_020114.dtd -rw-r--r-- root/root 3045 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_080101.dtd -rw-r--r-- root/root 3059 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_090101.dtd -rw-r--r-- root/root 3126 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_100101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_100301.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_110101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_120101.dtd -rw-r--r-- root/root 3434 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_130101.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_130501.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_140101.dtd -rw-r--r-- root/root 3445 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_150101.dtd -rw-r--r-- root/root 13062 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_180101.dtd -rw-r--r-- root/root 13869 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_180601.dtd -rw-r--r-- root/root 14576 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/pubmed_190101.dtd -rw-r--r-- root/root 40015 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/references.ent -rw-r--r-- root/root 13173 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/section.ent -rw-r--r-- root/root 4003 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/taxon.dtd -rw-r--r-- root/root 13595 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/DTDs/xmlspecchars.ent -rw-r--r-- root/root 32942 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/Parser.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Entrez/XSDs/ -rw-r--r-- root/root 3536 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/XSDs/IPGReportSet.xsd -rw-r--r-- root/root 22292 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Entrez/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/ExPASy/ -rw-r--r-- root/root 4550 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/Enzyme.py -rw-r--r-- root/root 5030 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/Prodoc.py -rw-r--r-- root/root 11747 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/Prosite.py -rw-r--r-- root/root 4430 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/ScanProsite.py -rw-r--r-- root/root 3648 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/__init__.py -rw-r--r-- root/root 5144 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/ExPASy/cellosaurus.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/FSSP/ -rw-r--r-- root/root 4090 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/FSSP/FSSPTools.py -rw-r--r-- root/root 9515 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/FSSP/__init__.py -rw-r--r-- root/root 1191 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/FSSP/fssp_rec.py -rw-r--r-- root/root 33540 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/File.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/GenBank/ -rw-r--r-- root/root 23618 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/GenBank/Record.py -rw-r--r-- root/root 100299 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/GenBank/Scanner.py -rw-r--r-- root/root 62908 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/GenBank/__init__.py -rw-r--r-- root/root 1905 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/GenBank/utils.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Geo/ -rw-r--r-- root/root 2983 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Geo/Record.py -rw-r--r-- root/root 2028 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Geo/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Graphics/ -rw-r--r-- root/root 31462 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/BasicChromosome.py -rw-r--r-- root/root 7364 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/ColorSpiral.py -rw-r--r-- root/root 6468 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/Comparative.py -rw-r--r-- root/root 6969 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/DisplayRepresentation.py -rw-r--r-- root/root 9614 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/Distribution.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/ -rw-r--r-- root/root 18981 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -rw-r--r-- root/root 66085 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -rw-r--r-- root/root 9684 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py -rw-r--r-- root/root 3330 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py -rw-r--r-- root/root 16139 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py -rw-r--r-- root/root 8110 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py -rw-r--r-- root/root 8683 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py -rw-r--r-- root/root 6908 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py -rw-r--r-- root/root 6182 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py -rw-r--r-- root/root 60415 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -rw-r--r-- root/root 12994 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py -rw-r--r-- root/root 1148 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py -rw-r--r-- root/root 17246 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/KGML_vis.py -rw-r--r-- root/root 3354 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Graphics/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/HMM/ -rw-r--r-- root/root 12877 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/HMM/DynamicProgramming.py -rw-r--r-- root/root 26715 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/HMM/MarkovModel.py -rw-r--r-- root/root 16990 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/HMM/Trainer.py -rw-r--r-- root/root 2174 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/HMM/Utilities.py -rw-r--r-- root/root 352 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/HMM/__init__.py -rw-r--r-- root/root 5055 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Index.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KDTree/ -rw-r--r-- root/root 29625 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/KDTree.c -rw-r--r-- root/root 720 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/KDTree.h -rw-r--r-- root/root 5323 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/KDTree.py -rw-r--r-- root/root 20001 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/KDTreemodule.c -rw-r--r-- root/root 151 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/Neighbor.h -rw-r--r-- root/root 32536 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KDTree/_CKDTree.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 735 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KDTree/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/Compound/ -rw-r--r-- root/root 5699 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/Compound/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/Enzyme/ -rw-r--r-- root/root 11747 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/Enzyme/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/Gene/ -rw-r--r-- root/root 4418 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/Gene/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/KGML/ -rw-r--r-- root/root 6458 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/KGML/KGML_parser.py -rw-r--r-- root/root 28206 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/KGML/KGML_pathway.py -rw-r--r-- root/root 446 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/KGML/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/KEGG/Map/ -rw-r--r-- root/root 1536 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/Map/__init__.py -rw-r--r-- root/root 10835 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/REST.py -rw-r--r-- root/root 2724 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/KEGG/__init__.py -rw-r--r-- root/root 4363 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/LogisticRegression.py -rw-r--r-- root/root 23762 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/MarkovModel.py -rw-r--r-- root/root 10813 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/MaxEntropy.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Medline/ -rw-r--r-- root/root 5348 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Medline/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/NMR/ -rw-r--r-- root/root 3421 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/NMR/NOEtools.py -rw-r--r-- root/root 332 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/NMR/__init__.py -rw-r--r-- root/root 9632 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/NMR/xpktools.py -rw-r--r-- root/root 7893 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/NaiveBayes.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Nexus/ -rw-r--r-- root/root 81831 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/Nexus.py -rw-r--r-- root/root 5568 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/Nodes.py -rw-r--r-- root/root 4031 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/StandardData.py -rw-r--r-- root/root 38456 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/Trees.py -rw-r--r-- root/root 249 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/__init__.py -rw-r--r-- root/root 3756 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Nexus/cnexus.c -rw-r--r-- root/root 14552 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-37m-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PDB/ -rw-r--r-- root/root 3838 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/AbstractPropertyMap.py -rw-r--r-- root/root 14488 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Atom.py -rw-r--r-- root/root 5174 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Chain.py -rw-r--r-- root/root 18765 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/DSSP.py -rw-r--r-- root/root 2449 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Dice.py -rw-r--r-- root/root 13468 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Entity.py -rw-r--r-- root/root 9152 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/FragmentMapper.py -rw-r--r-- root/root 11300 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/HSExposure.py -rw-r--r-- root/root 4576 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/MMCIF2Dict.py -rw-r--r-- root/root 18416 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/MMCIFParser.py -rw-r--r-- root/root 1413 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Model.py -rw-r--r-- root/root 7328 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/NACCESS.py -rw-r--r-- root/root 4934 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/NeighborSearch.py -rw-r--r-- root/root 692 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/PDBExceptions.py -rw-r--r-- root/root 8675 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/PDBIO.py -rw-r--r-- root/root 21538 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/PDBList.py -rw-r--r-- root/root 13482 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/PDBParser.py -rw-r--r-- root/root 2963 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/PSEA.py -rw-r--r-- root/root 14006 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Polypeptide.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/ -rw-r--r-- root/root 5053 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/__init__.py -rw-r--r-- root/root 9289 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.c -rw-r--r-- root/root 14552 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 5331 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Residue.py -rw-r--r-- root/root 22852 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/ResidueDepth.py -rw-r--r-- root/root 2501 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Selection.py -rw-r--r-- root/root 1239 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Structure.py -rw-r--r-- root/root 3159 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/StructureAlignment.py -rw-r--r-- root/root 11035 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/StructureBuilder.py -rw-r--r-- root/root 1923 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Superimposer.py -rw-r--r-- root/root 1608 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/Vector.py -rw-r--r-- root/root 2132 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/__init__.py -rw-r--r-- root/root 43059 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/kdtrees.c -rw-r--r-- root/root 26992 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 15461 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/mmcifio.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PDB/mmtf/ -rw-r--r-- root/root 8862 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/mmtf/DefaultParser.py -rw-r--r-- root/root 1543 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/mmtf/__init__.py -rw-r--r-- root/root 8880 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/parse_pdb_header.py -rw-r--r-- root/root 9698 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PDB/vectors.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Pathway/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Pathway/Rep/ -rw-r--r-- root/root 5910 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Pathway/Rep/Graph.py -rw-r--r-- root/root 6796 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Pathway/Rep/MultiGraph.py -rw-r--r-- root/root 505 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Pathway/Rep/__init__.py -rw-r--r-- root/root 10935 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Pathway/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Phylo/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Phylo/Applications/ -rw-r--r-- root/root 27386 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Applications/_Fasttree.py -rw-r--r-- root/root 10305 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Applications/_Phyml.py -rw-r--r-- root/root 20490 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Applications/_Raxml.py -rw-r--r-- root/root 557 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Applications/__init__.py -rw-r--r-- root/root 46359 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/BaseTree.py -rw-r--r-- root/root 1562 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/CDAO.py -rw-r--r-- root/root 15783 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/CDAOIO.py -rw-r--r-- root/root 23764 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Consensus.py -rw-r--r-- root/root 1314 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/NeXML.py -rw-r--r-- root/root 11387 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/NeXMLIO.py -rw-r--r-- root/root 1198 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/Newick.py -rw-r--r-- root/root 12633 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/NewickIO.py -rw-r--r-- root/root 2583 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/NexusIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/ -rw-r--r-- root/root 316 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/__init__.py -rw-r--r-- root/root 5010 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/_paml.py -rw-r--r-- root/root 11269 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/_parse_baseml.py -rw-r--r-- root/root 21779 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/_parse_codeml.py -rw-r--r-- root/root 6550 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/_parse_yn00.py -rw-r--r-- root/root 8516 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/baseml.py -rw-r--r-- root/root 3392 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/chi2.py -rw-r--r-- root/root 9226 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/codeml.py -rw-r--r-- root/root 5624 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PAML/yn00.py -rw-r--r-- root/root 48449 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PhyloXML.py -rw-r--r-- root/root 33559 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/PhyloXMLIO.py -rw-r--r-- root/root 41830 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/TreeConstruction.py -rw-r--r-- root/root 459 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/__init__.py -rw-r--r-- root/root 109134 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/_cdao_owl.py -rw-r--r-- root/root 2588 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/_io.py -rw-r--r-- root/root 22108 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Phylo/_utils.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PopGen/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/ -rw-r--r-- root/root 33259 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/Controller.py -rw-r--r-- root/root 6844 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/EasyController.py -rw-r--r-- root/root 11780 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/FileParser.py -rw-r--r-- root/root 3842 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py -rw-r--r-- root/root 494 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/Utils.py -rw-r--r-- root/root 7324 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/GenePop/__init__.py -rw-r--r-- root/root 290 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/PopGen/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Restriction/ -rw-r--r-- root/root 14733 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Restriction/PrintFormat.py -rw-r--r-- root/root 2524 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Restriction/RanaConfig.py -rw-r--r-- root/root 85902 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Restriction/Restriction.py -rw-r--r-- root/root 507861 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Restriction/Restriction_Dictionary.py -rw-r--r-- root/root 8713 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Restriction/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SCOP/ -rw-r--r-- root/root 3844 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Cla.py -rw-r--r-- root/root 2935 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Des.py -rw-r--r-- root/root 2401 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Dom.py -rw-r--r-- root/root 2918 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Hie.py -rw-r--r-- root/root 10255 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Raf.py -rw-r--r-- root/root 3010 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/Residues.py -rw-r--r-- root/root 32134 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SCOP/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SVDSuperimposer/ -rw-r--r-- root/root 6178 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SVDSuperimposer/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlastIO/ -rw-r--r-- root/root 23896 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlastIO/__init__.py -rw-r--r-- root/root 34616 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py -rw-r--r-- root/root 5905 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlastIO/blast_text.py -rw-r--r-- root/root 37975 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py -rw-r--r-- root/root 31796 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/BlatIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/ -rw-r--r-- root/root 12964 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py -rw-r--r-- root/root 20082 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/_base.py -rw-r--r-- root/root 4126 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -rw-r--r-- root/root 20570 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py -rw-r--r-- root/root 8304 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -rw-r--r-- root/root 26132 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/FastaIO.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/ -rw-r--r-- root/root 20291 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/__init__.py -rw-r--r-- root/root 1509 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/_base.py -rw-r--r-- root/root 12743 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py -rw-r--r-- root/root 13575 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -rw-r--r-- root/root 12902 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py -rw-r--r-- root/root 18935 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/InterproscanIO/ -rw-r--r-- root/root 5073 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py -rw-r--r-- root/root 8085 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py -rw-r--r-- root/root 29359 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/__init__.py -rw-r--r-- root/root 1288 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_index.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/_legacy/ -rw-r--r-- root/root 75071 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_legacy/NCBIStandalone.py -rw-r--r-- root/root 8539 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_legacy/ParserSupport.py -rw-r--r-- root/root 313 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_legacy/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/ -rw-r--r-- root/root 2463 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/__init__.py -rw-r--r-- root/root 2643 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/_base.py -rw-r--r-- root/root 17462 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/hit.py -rw-r--r-- root/root 49629 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/hsp.py -rw-r--r-- root/root 31885 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_model/query.py -rw-r--r-- root/root 4951 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SearchIO/_utils.py -rw-r--r-- root/root 108503 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Seq.py -rw-r--r-- root/root 75153 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqFeature.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SeqIO/ -rw-r--r-- root/root 25742 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/AbiIO.py -rw-r--r-- root/root 4659 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/AceIO.py -rw-r--r-- root/root 13837 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/FastaIO.py -rw-r--r-- root/root 3880 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/IgIO.py -rw-r--r-- root/root 53432 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/InsdcIO.py -rw-r--r-- root/root 9021 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/Interfaces.py -rw-r--r-- root/root 19595 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/PdbIO.py -rw-r--r-- root/root 6169 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/PhdIO.py -rw-r--r-- root/root 10602 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/PirIO.py -rw-r--r-- root/root 78388 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/QualityIO.py -rw-r--r-- root/root 16799 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/SeqXmlIO.py -rw-r--r-- root/root 55367 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/SffIO.py -rw-r--r-- root/root 6721 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/SwissIO.py -rw-r--r-- root/root 4490 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/TabIO.py -rw-r--r-- root/root 25938 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/UniprotIO.py -rw-r--r-- root/root 44842 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/__init__.py -rw-r--r-- root/root 16146 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/_convert.py -rw-r--r-- root/root 28076 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqIO/_index.py -rw-r--r-- root/root 53367 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqRecord.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SeqUtils/ -rw-r--r-- root/root 4117 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/CheckSum.py -rw-r--r-- root/root 6710 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/CodonUsage.py -rw-r--r-- root/root 1304 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/CodonUsageIndices.py -rw-r--r-- root/root 4696 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/IsoelectricPoint.py -rw-r--r-- root/root 44700 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/MeltingTemp.py -rw-r--r-- root/root 12636 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/ProtParam.py -rw-r--r-- root/root 8107 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/ProtParamData.py -rw-r--r-- root/root 17772 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/__init__.py -rw-r--r-- root/root 6014 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SeqUtils/lcc.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Sequencing/ -rw-r--r-- root/root 19666 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Ace.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Sequencing/Applications/ -rw-r--r-- root/root 8295 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Applications/_Novoalign.py -rw-r--r-- root/root 2032 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Applications/__init__.py -rw-r--r-- root/root 26672 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Applications/_bwa.py -rw-r--r-- root/root 33680 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Applications/_samtools.py -rw-r--r-- root/root 4794 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/Phd.py -rw-r--r-- root/root 412 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Sequencing/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Statistics/ -rw-r--r-- root/root 330 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Statistics/__init__.py -rw-r--r-- root/root 3843 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Statistics/lowess.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SubsMat/ -rw-r--r-- root/root 2525 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SubsMat/FreqTable.py -rw-r--r-- root/root 185972 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SubsMat/MatrixInfo.py -rw-r--r-- root/root 24551 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SubsMat/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/SwissProt/ -rw-r--r-- root/root 3298 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SwissProt/KeyWList.py -rw-r--r-- root/root 23013 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/SwissProt/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/TogoWS/ -rw-r--r-- root/root 13820 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/TogoWS/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/UniGene/ -rw-r--r-- root/root 12373 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/UniGene/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/UniProt/ -rw-r--r-- root/root 14268 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/UniProt/GOA.py -rw-r--r-- root/root 582 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/UniProt/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/Wise/ -rw-r--r-- root/root 4943 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Wise/__init__.py -rw-r--r-- root/root 4591 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Wise/dnal.py -rw-r--r-- root/root 4041 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/Wise/psw.py -rw-r--r-- root/root 3744 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/__init__.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/_py3k/ -rw-r--r-- root/root 7425 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/_py3k/__init__.py -rw-r--r-- root/root 3635 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/_utils.py -rw-r--r-- root/root 35695 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/bgzf.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/codonalign/ -rw-r--r-- root/root 32989 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/codonalign/__init__.py -rw-r--r-- root/root 3296 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/codonalign/chisq.py -rw-r--r-- root/root 17008 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/codonalign/codonalignment.py -rw-r--r-- root/root 1467 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/codonalign/codonalphabet.py -rw-r--r-- root/root 50963 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/codonalign/codonseq.py -rw-r--r-- root/root 18808 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 16026 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/cpairwise2module.c -rw-r--r-- root/root 4197 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/kNN.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/motifs/ -rw-r--r-- root/root 19073 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/__init__.py -rw-r--r-- root/root 5614 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/_pwm.c -rw-r--r-- root/root 14808 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 2096 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/alignace.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/motifs/applications/ -rw-r--r-- root/root 352 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/applications/__init__.py -rw-r--r-- root/root 9614 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/applications/_xxmotif.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/motifs/jaspar/ -rw-r--r-- root/root 11383 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/jaspar/__init__.py -rw-r--r-- root/root 27692 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/jaspar/db.py -rw-r--r-- root/root 5005 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/mast.py -rw-r--r-- root/root 21226 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/matrix.py -rw-r--r-- root/root 11995 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/meme.py -rw-r--r-- root/root 5347 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/minimal.py -rw-r--r-- root/root 4490 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/thresholds.py -rw-r--r-- root/root 11868 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/motifs/transfac.py -rw-r--r-- root/root 45456 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/pairwise2.py drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/phenotype/ -rw-r--r-- root/root 8494 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/phenotype/__init__.py -rw-r--r-- root/root 37238 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/phenotype/phen_micro.py -rw-r--r-- root/root 3935 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/phenotype/pm_fitting.py -rw-r--r-- root/root 22648 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/trie.c -rw-r--r-- root/root 32776 2019-03-04 19:21 ./usr/lib/python3/dist-packages/Bio/trie.cpython-37m-x86_64-linux-gnu.so -rw-r--r-- root/root 4136 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/trie.h -rw-r--r-- root/root 3694 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/triefind.py -rw-r--r-- root/root 20784 2018-12-18 12:44 ./usr/lib/python3/dist-packages/Bio/triemodule.c drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/biopython-1.73.egg-info/ -rw-r--r-- root/root 15892 2019-03-04 19:21 ./usr/lib/python3/dist-packages/biopython-1.73.egg-info/PKG-INFO -rw-r--r-- root/root 1 2019-03-04 19:21 ./usr/lib/python3/dist-packages/biopython-1.73.egg-info/dependency_links.txt -rw-r--r-- root/root 0 2019-03-04 19:21 ./usr/lib/python3/dist-packages/biopython-1.73.egg-info/requires.txt -rw-r--r-- root/root 11 2019-03-04 19:21 ./usr/lib/python3/dist-packages/biopython-1.73.egg-info/top_level.txt drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-03-04 19:21 ./usr/share/doc/python3-biopython/ -rw-r--r-- root/root 1328 2019-03-04 19:21 ./usr/share/doc/python3-biopython/changelog.Debian.gz -rw-r--r-- root/root 2038 2019-01-11 22:23 ./usr/share/doc/python3-biopython/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 445728 Build-Time: 749 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 171 Job: python-biopython_1.73+dfsg-1ubuntu1.dsc Machine Architecture: amd64 Package: python-biopython Package-Time: 921 Source-Version: 1.73+dfsg-1ubuntu1 Space: 445728 Status: successful Version: 1.73+dfsg-1ubuntu1 -------------------------------------------------------------------------------- Finished at 20190304-2002 Build needed 00:15:21, 445728k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16447221 Scanning for processes to kill in build PACKAGEBUILD-16447221