RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux tipua 3.2.0-54-generic #82-Ubuntu SMP Tue Sep 10 20:08:42 UTC 2013 x86_64 Buildd toolchain package versions: launchpad-buildd_119~0.IS.08.04 python-lpbuildd_119~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 22 Oct 10:09:17 ntpdate[16808]: adjust time server 10.211.37.1 offset -0.000002 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5141817', '/home/buildd/filecache-default/37b791c418443a1a9f244249f7640827adb86fb0'] Unpacking chroot for build PACKAGEBUILD-5141817 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5141817'] Mounting chroot for build PACKAGEBUILD-5141817 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5141817', 'deb http://ftpmaster.internal/ubuntu trusty main universe', 'deb http://ftpmaster.internal/ubuntu trusty-security main universe', 'deb http://ftpmaster.internal/ubuntu trusty-updates main universe', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-5141817 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5141817', 'amd64'] Updating debian chroot for build PACKAGEBUILD-5141817 Ign http://ftpmaster.internal trusty InRelease Ign http://archive-team.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Ign http://archive-team.internal trusty Release.gpg Ign http://ftpmaster.internal trusty-updates InRelease Ign http://ftpmaster.internal trusty-proposed InRelease Get:1 http://archive-team.internal trusty Release [730 B] Get:2 http://ftpmaster.internal trusty Release.gpg [933 B] Get:3 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:4 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:6 http://ftpmaster.internal trusty Release [49.6 kB] Get:7 http://ftpmaster.internal trusty-security Release [49.6 kB] Get:8 http://archive-team.internal trusty/main amd64 Packages Get:9 http://ftpmaster.internal trusty-updates Release [49.6 kB] Ign http://archive-team.internal trusty/main Translation-en Get:10 http://ftpmaster.internal trusty-proposed Release [49.6 kB] Get:11 http://ftpmaster.internal trusty/main amd64 Packages [1250 kB] Get:12 http://ftpmaster.internal trusty/universe amd64 Packages [5643 kB] Get:13 http://ftpmaster.internal trusty/main Translation-en [719 kB] Get:14 http://ftpmaster.internal trusty/universe Translation-en [3910 kB] Get:15 http://ftpmaster.internal trusty-security/main amd64 Packages [14 B] Get:16 http://ftpmaster.internal trusty-security/universe amd64 Packages [14 B] Get:17 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:18 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:19 http://ftpmaster.internal trusty-updates/main amd64 Packages [14 B] Get:20 http://ftpmaster.internal trusty-updates/universe amd64 Packages [14 B] Get:21 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:22 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:23 http://ftpmaster.internal trusty-proposed/main amd64 Packages [75.1 kB] Get:24 http://ftpmaster.internal trusty-proposed/universe amd64 Packages [384 kB] Get:25 http://ftpmaster.internal trusty-proposed/main Translation-en [47.1 kB] Get:26 http://ftpmaster.internal trusty-proposed/universe Translation-en [359 kB] Fetched 12.6 MB in 4s (2757 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libdb5.3 libprocps1 The following packages will be upgraded: base-files base-passwd binutils busybox-initramfs bzip2 cpp-4.8 diffutils g++-4.8 gcc-4.8 gcc-4.8-base grep ifupdown iproute iproute2 libasan0 libatomic1 libbz2-1.0 libcloog-isl4 libdrm2 libgcc-4.8-dev libgcc1 libgomp1 libisl10 libitm1 libjson-c2 libjson0 libkeyutils1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libprocps0 libquadmath0 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-4.8-dev libstdc++6 libtsan0 libudev1 perl perl-base perl-modules procps sed tar udev 48 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 45.7 MB of archives. After this operation, 4445 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files diffutils grep perl perl-base perl-modules bzip2 libbz2-1.0 sed tar base-passwd libitm1 libgomp1 gcc-4.8-base libstdc++6 libasan0 libatomic1 libtsan0 libquadmath0 cpp-4.8 binutils libstdc++-4.8-dev g++-4.8 gcc-4.8 libgcc-4.8-dev libgcc1 libcloog-isl4 libisl10 libdb5.3 libpam0g libselinux1 libpam-modules-bin libpam-modules libsemanage-common libsemanage1 libprocps1 libsqlite3-0 libdrm2 libjson-c2 libprocps0 udev libudev1 libkeyutils1 libpam-runtime busybox-initramfs iproute2 ifupdown libjson0 procps iproute Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files amd64 6.12ubuntu5 [61.8 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main diffutils amd64 1:3.3-1 [206 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main grep amd64 2.14-4 [298 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl amd64 5.18.1-4 [4469 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-base amd64 5.18.1-4 [1582 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-modules all 5.18.1-4 [3926 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main bzip2 amd64 1.0.6-5 [38.8 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libbz2-1.0 amd64 1.0.6-5 [33.9 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main sed amd64 4.2.2-2ubuntu1 [143 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty-proposed/main tar amd64 1.27-1 [234 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main base-passwd amd64 3.5.28 [39.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libitm1 amd64 4.8.2-1ubuntu2 [37.4 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libgomp1 amd64 4.8.2-1ubuntu2 [27.0 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8-base amd64 4.8.2-1ubuntu2 [16.0 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++6 amd64 4.8.2-1ubuntu2 [326 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libasan0 amd64 4.8.2-1ubuntu2 [75.8 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libatomic1 amd64 4.8.2-1ubuntu2 [10.3 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libtsan0 amd64 4.8.2-1ubuntu2 [118 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libquadmath0 amd64 4.8.2-1ubuntu2 [139 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main cpp-4.8 amd64 4.8.2-1ubuntu2 [5838 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main binutils amd64 2.23.90.20131017-1ubuntu1 [3590 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++-4.8-dev amd64 4.8.2-1ubuntu2 [1754 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main g++-4.8 amd64 4.8.2-1ubuntu2 [8702 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8 amd64 4.8.2-1ubuntu2 [6642 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libgcc-4.8-dev amd64 4.8.2-1ubuntu2 [2791 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libgcc1 amd64 1:4.8.2-1ubuntu2 [43.4 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libcloog-isl4 amd64 0.18.1-1 [67.8 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libisl10 amd64 0.12.1-1 [524 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main libdb5.3 amd64 5.3.21-2 [786 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main libpam0g amd64 1.1.3-10ubuntu1 [62.2 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main libselinux1 amd64 2.1.13-3 [67.2 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules-bin amd64 1.1.3-10ubuntu1 [48.0 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules amd64 1.1.3-10ubuntu1 [284 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage-common all 2.1.10-3 [6586 B] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage1 amd64 2.1.10-3 [84.0 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main libprocps1 amd64 1:3.3.8-2ubuntu1 [36.1 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libsqlite3-0 amd64 3.8.0.2-1ubuntu1 [385 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libdrm2 amd64 2.4.46-3 [26.5 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libjson-c2 amd64 0.11-3ubuntu1 [23.8 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libprocps0 amd64 1:3.3.3-2ubuntu8 [35.9 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main udev amd64 204-0ubuntu19 [1038 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 amd64 204-0ubuntu19 [35.8 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libkeyutils1 amd64 1.5.6-1 [7318 B] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main libpam-runtime all 1.1.3-10ubuntu1 [40.9 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main busybox-initramfs amd64 1:1.20.0-9ubuntu1 [202 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main iproute2 amd64 3.11.0-1 [532 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main ifupdown amd64 0.7.45ubuntu1 [58.7 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main libjson0 amd64 0.11-3ubuntu1 [1018 B] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main procps amd64 1:3.3.8-2ubuntu1 [250 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main iproute all 1:3.11.0-1 [2324 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 45.7 MB in 1s (30.6 MB/s) (Reading database ... 12079 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu4 (using .../base-files_6.12ubuntu5_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.12ubuntu5) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace diffutils 1:3.2-8 (using .../diffutils_1%3a3.3-1_amd64.deb) ... Unpacking replacement diffutils ... Setting up diffutils (1:3.3-1) ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace grep 2.14-3 (using .../archives/grep_2.14-4_amd64.deb) ... Unpacking replacement grep ... Setting up grep (2.14-4) ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace perl 5.14.2-21build1 (using .../perl_5.18.1-4_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-21build1 (using .../perl-base_5.18.1-4_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.18.1-4) ... (Reading database ... 11981 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-21build1 (using .../perl-modules_5.18.1-4_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace bzip2 1.0.6-4 (using .../bzip2_1.0.6-5_amd64.deb) ... Unpacking replacement bzip2 ... Preparing to replace libbz2-1.0:amd64 1.0.6-4 (using .../libbz2-1.0_1.0.6-5_amd64.deb) ... Unpacking replacement libbz2-1.0:amd64 ... Setting up libbz2-1.0:amd64 (1.0.6-5) ... Processing triggers for libc-bin ... (Reading database ... 12018 files and directories currently installed.) Preparing to replace sed 4.2.2-1ubuntu1 (using .../sed_4.2.2-2ubuntu1_amd64.deb) ... Unpacking replacement sed ... Setting up sed (4.2.2-2ubuntu1) ... (Reading database ... 12018 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-8 (using .../archives/tar_1.27-1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.27-1) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace base-passwd 3.5.26 (using .../base-passwd_3.5.28_amd64.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.28) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libitm1:amd64 4.8.1-10ubuntu8 (using .../libitm1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libitm1:amd64 ... Preparing to replace libgomp1:amd64 4.8.1-10ubuntu8 (using .../libgomp1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgomp1:amd64 ... Preparing to replace gcc-4.8-base:amd64 4.8.1-10ubuntu8 (using .../gcc-4.8-base_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement gcc-4.8-base:amd64 ... Setting up gcc-4.8-base:amd64 (4.8.2-1ubuntu2) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libstdc++6:amd64 4.8.1-10ubuntu8 (using .../libstdc++6_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Preparing to replace libgcc1:amd64 1:4.8.1-10ubuntu8 (using .../libgcc1_1%3a4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgcc1:amd64 ... Setting up libgcc1:amd64 (1:4.8.2-1ubuntu2) ... Setting up libstdc++6:amd64 (4.8.2-1ubuntu2) ... Processing triggers for libc-bin ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libasan0:amd64 4.8.1-10ubuntu8 (using .../libasan0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libasan0:amd64 ... Preparing to replace libatomic1:amd64 4.8.1-10ubuntu8 (using .../libatomic1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libatomic1:amd64 ... Preparing to replace libtsan0:amd64 4.8.1-10ubuntu8 (using .../libtsan0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libtsan0:amd64 ... Preparing to replace libquadmath0:amd64 4.8.1-10ubuntu8 (using .../libquadmath0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libquadmath0:amd64 ... Preparing to replace cpp-4.8 4.8.1-10ubuntu8 (using .../cpp-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement cpp-4.8 ... Preparing to replace binutils 2.23.52.20130913-0ubuntu1 (using .../binutils_2.23.90.20131017-1ubuntu1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libstdc++-4.8-dev:amd64 4.8.1-10ubuntu8 (using .../libstdc++-4.8-dev_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libstdc++-4.8-dev:amd64 ... Preparing to replace g++-4.8 4.8.1-10ubuntu8 (using .../g++-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement g++-4.8 ... Preparing to replace gcc-4.8 4.8.1-10ubuntu8 (using .../gcc-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement gcc-4.8 ... Preparing to replace libgcc-4.8-dev:amd64 4.8.1-10ubuntu8 (using .../libgcc-4.8-dev_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgcc-4.8-dev:amd64 ... Preparing to replace libcloog-isl4:amd64 0.18.0-2 (using .../libcloog-isl4_0.18.1-1_amd64.deb) ... Unpacking replacement libcloog-isl4:amd64 ... Preparing to replace libisl10:amd64 0.11.2-1 (using .../libisl10_0.12.1-1_amd64.deb) ... Unpacking replacement libisl10:amd64 ... Selecting previously unselected package libdb5.3:amd64. Unpacking libdb5.3:amd64 (from .../libdb5.3_5.3.21-2_amd64.deb) ... Setting up libdb5.3:amd64 (5.3.21-2) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam0g:amd64 1.1.3-8ubuntu3 (using .../libpam0g_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam0g:amd64 ... Setting up libpam0g:amd64 (1.1.3-10ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libselinux1:amd64 2.1.13-2 (using .../libselinux1_2.1.13-3_amd64.deb) ... Unpacking replacement libselinux1:amd64 ... Setting up libselinux1:amd64 (2.1.13-3) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam-modules-bin 1.1.3-8ubuntu3 (using .../libpam-modules-bin_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam-modules-bin ... Setting up libpam-modules-bin (1.1.3-10ubuntu1) ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam-modules:amd64 1.1.3-8ubuntu3 (using .../libpam-modules_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam-modules:amd64 ... Setting up libpam-modules:amd64 (1.1.3-10ubuntu1) ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libsemanage-common 2.1.10-2 (using .../libsemanage-common_2.1.10-3_all.deb) ... Unpacking replacement libsemanage-common ... Setting up libsemanage-common (2.1.10-3) ... Installing new version of config file /etc/selinux/semanage.conf ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libsemanage1:amd64 2.1.10-2 (using .../libsemanage1_2.1.10-3_amd64.deb) ... Unpacking replacement libsemanage1:amd64 ... Setting up libsemanage1:amd64 (2.1.10-3) ... Processing triggers for libc-bin ... Selecting previously unselected package libprocps1:amd64. (Reading database ... 12025 files and directories currently installed.) Unpacking libprocps1:amd64 (from .../libprocps1_1%3a3.3.8-2ubuntu1_amd64.deb) ... Preparing to replace libsqlite3-0:amd64 3.7.17-1ubuntu1 (using .../libsqlite3-0_3.8.0.2-1ubuntu1_amd64.deb) ... Unpacking replacement libsqlite3-0:amd64 ... Preparing to replace libdrm2:amd64 2.4.46-1 (using .../libdrm2_2.4.46-3_amd64.deb) ... Unpacking replacement libdrm2:amd64 ... Preparing to replace libjson-c2:amd64 0.11-2ubuntu1 (using .../libjson-c2_0.11-3ubuntu1_amd64.deb) ... Unpacking replacement libjson-c2:amd64 ... Preparing to replace libprocps0:amd64 1:3.3.3-2ubuntu7 (using .../libprocps0_1%3a3.3.3-2ubuntu8_amd64.deb) ... Unpacking replacement libprocps0:amd64 ... Preparing to replace udev 204-0ubuntu18 (using .../udev_204-0ubuntu19_amd64.deb) ... Adding 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace libudev1:amd64 204-0ubuntu18 (using .../libudev1_204-0ubuntu19_amd64.deb) ... Unpacking replacement libudev1:amd64 ... Preparing to replace libkeyutils1:amd64 1.5.5-7 (using .../libkeyutils1_1.5.6-1_amd64.deb) ... Unpacking replacement libkeyutils1:amd64 ... Preparing to replace libpam-runtime 1.1.3-8ubuntu3 (using .../libpam-runtime_1.1.3-10ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-10ubuntu1) ... (Reading database ... 12032 files and directories currently installed.) Preparing to replace busybox-initramfs 1:1.20.0-8.1ubuntu1 (using .../busybox-initramfs_1%3a1.20.0-9ubuntu1_amd64.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace iproute2 3.10.0-1ubuntu1 (using .../iproute2_3.11.0-1_amd64.deb) ... Unpacking replacement iproute2 ... Preparing to replace ifupdown 0.7.44ubuntu3 (using .../ifupdown_0.7.45ubuntu1_amd64.deb) ... Unpacking replacement ifupdown ... Preparing to replace libjson0:amd64 0.11-2ubuntu1 (using .../libjson0_0.11-3ubuntu1_amd64.deb) ... Unpacking replacement libjson0:amd64 ... Preparing to replace procps 1:3.3.3-2ubuntu7 (using .../procps_1%3a3.3.8-2ubuntu1_amd64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace iproute 1:3.10.0-1ubuntu1 (using .../iproute_1%3a3.11.0-1_all.deb) ... Unpacking replacement iproute ... Setting up bzip2 (1.0.6-5) ... Setting up libitm1:amd64 (4.8.2-1ubuntu2) ... Setting up libgomp1:amd64 (4.8.2-1ubuntu2) ... Setting up libasan0:amd64 (4.8.2-1ubuntu2) ... Setting up libatomic1:amd64 (4.8.2-1ubuntu2) ... Setting up libtsan0:amd64 (4.8.2-1ubuntu2) ... Setting up libquadmath0:amd64 (4.8.2-1ubuntu2) ... Setting up libisl10:amd64 (0.12.1-1) ... Setting up libcloog-isl4:amd64 (0.18.1-1) ... Setting up cpp-4.8 (4.8.2-1ubuntu2) ... Setting up binutils (2.23.90.20131017-1ubuntu1) ... Setting up libgcc-4.8-dev:amd64 (4.8.2-1ubuntu2) ... Setting up libstdc++-4.8-dev:amd64 (4.8.2-1ubuntu2) ... Setting up gcc-4.8 (4.8.2-1ubuntu2) ... Setting up g++-4.8 (4.8.2-1ubuntu2) ... Setting up libprocps1:amd64 (1:3.3.8-2ubuntu1) ... Setting up libsqlite3-0:amd64 (3.8.0.2-1ubuntu1) ... Setting up libdrm2:amd64 (2.4.46-3) ... Setting up libjson-c2:amd64 (0.11-3ubuntu1) ... Setting up libprocps0:amd64 (1:3.3.3-2ubuntu8) ... Setting up libudev1:amd64 (204-0ubuntu19) ... Setting up udev (204-0ubuntu19) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up libkeyutils1:amd64 (1.5.6-1) ... Setting up busybox-initramfs (1:1.20.0-9ubuntu1) ... Setting up iproute2 (3.11.0-1) ... Setting up ifupdown (0.7.45ubuntu1) ... Setting up libjson0:amd64 (0.11-3ubuntu1) ... Setting up procps (1:3.3.8-2ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Installing new version of config file /etc/init.d/procps ... invoke-rc.d: policy-rc.d denied execution of start. Setting up iproute (1:3.11.0-1) ... Setting up perl-modules (5.18.1-4) ... Setting up perl (5.18.1-4) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5141817', 'amd64', 'trusty-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty-proposed', '--purpose=PRIMARY', '--architecture=amd64', '--comp=universe', 'python-biopython_1.62-1.dsc'] Initiating build PACKAGEBUILD-5141817 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.2.0-54-generic #82-Ubuntu SMP Tue Sep 10 20:08:42 UTC 2013 x86_64 Automatic build of python-biopython_1.62-1 on tipua by sbuild/amd64 1.170.5 Build started at 20131022-1009 ****************************************************************************** python-biopython_1.62-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), dpkg-dev (>= 1.16.1~), cdbs (>= 0.4.90~), python-all (>= 2.6.6-3~), python-all-dev, flex, python-reportlab, python-numpy, python-mysqldb, wise Checking for already installed source dependencies... debhelper: missing dpkg-dev: already installed (1.16.12ubuntu1 >= 1.16.1~ is satisfied) cdbs: missing python-all: missing python-all-dev: missing flex: missing python-reportlab: missing python-numpy: missing python-mysqldb: missing wise: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cdbs python-all python-all-dev flex python-reportlab python-numpy python-mysqldb wise Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: apparmor-easyprof autoconf automake autotools-dev bsdmainutils ca-certificates dh-apparmor dh-python dh-translations file gettext gettext-base groff-base intltool intltool-debian libasprintf0c2 libblas3 libcroco3 libencode-locale-perl libexpat1 libexpat1-dev libffi6 libfile-listing-perl libfl-dev libgfortran3 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic1 libmysqlclient18 libnet-http-perl libnet-ssleay-perl libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libsigsegv2 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 m4 man-db mime-support mysql-common netbase openssl po-debconf python python-dev python-minimal python-scour python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal wise-data Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts dh-make bison gettext-doc groff libdata-dump-perl libcrypt-ssleay-perl libauthen-ntlm-perl less www-browser libmail-box-perl python-doc python-tk python-egenix-mxdatetime mysql-server-5.1 mysql-server python-mysqldb-dbg python-numpy-doc python-numpy-dbg python-nose gfortran pdf-viewer python-egenix-mxtexttools python-reportlab-doc python-rsvg python-cairo python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc wise-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info libhtml-format-perl libio-socket-inet6-perl libio-socket-ip-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xml-core libmail-sendmail-perl python-reportlab-accel python-renderpm python-imaging The following NEW packages will be installed: apparmor-easyprof autoconf automake autotools-dev bsdmainutils ca-certificates cdbs debhelper dh-apparmor dh-python dh-translations file flex gettext gettext-base groff-base intltool intltool-debian libasprintf0c2 libblas3 libcroco3 libencode-locale-perl libexpat1 libexpat1-dev libffi6 libfile-listing-perl libfl-dev libgfortran3 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic1 libmysqlclient18 libnet-http-perl libnet-ssleay-perl libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libsigsegv2 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 m4 man-db mime-support mysql-common netbase openssl po-debconf python python-all python-all-dev python-dev python-minimal python-mysqldb python-numpy python-reportlab python-scour python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal wise wise-data 0 upgraded, 88 newly installed, 0 to remove and 0 not upgraded. Need to get 53.5 MB of archives. After this operation, 138 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libffi6 libmagic1 libpython3.3-minimal mime-support libpython3.3-stdlib python3.3-minimal libasprintf0c2 libglib2.0-0 libpipeline1 libxml2 groff-base bsdmainutils man-db libsigsegv2 m4 libfl-dev flex libcroco3 libgfortran3 mysql-common libmysqlclient18 libpython2.7-minimal libpython2.7-stdlib libpython2.7 libexpat1-dev libpython2.7-dev libunistring0 python2.7-minimal wise-data wise python3.3 python3-minimal libpython3-stdlib python3 dh-python file netbase openssl ca-certificates gettext-base autoconf autotools-dev automake gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper liburi-perl libencode-locale-perl libhttp-date-perl libfile-listing-perl libhtml-tagset-perl libhtml-parser-perl libhtml-tree-perl libio-html-perl liblwp-mediatypes-perl libhttp-message-perl libhttp-cookies-perl libhttp-negotiate-perl libnet-ssleay-perl libio-socket-ssl-perl libnet-http-perl liblwp-protocol-https-perl libwww-robotrules-perl libwww-perl libxml-parser-perl intltool dh-translations python2.7 python-minimal libpython-stdlib python python-scour cdbs libblas3 liblapack3 libpython-dev libpython-all-dev python-all python2.7-dev python-dev python-all-dev python-mysqldb python-numpy python-reportlab Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 amd64 2.1.0-4 [129 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 amd64 3.0.13-4 [19.4 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 amd64 5.11-2ubuntu4 [170 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal amd64 3.3.2-7ubuntu3 [619 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib amd64 3.3.2-7ubuntu3 [2687 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal amd64 3.3.2-7ubuntu3 [1750 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 amd64 0.18.3.1-1ubuntu1 [7244 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 amd64 2.38.1-1 [1015 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 amd64 1.2.4-1 [27.2 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 amd64 2.9.1+dfsg1-3ubuntu2 [693 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main groff-base amd64 1.22.2-3 [719 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils amd64 9.0.5ubuntu1 [203 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main man-db amd64 2.6.5-2 [710 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libsigsegv2 amd64 2.10-2 [15.0 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main m4 amd64 1.4.17-1 [206 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libfl-dev amd64 2.5.35-10.1ubuntu1 [18.8 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main flex amd64 2.5.35-10.1ubuntu1 [232 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 amd64 0.6.8-2 [82.6 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran3 amd64 4.8.2-1ubuntu2 [347 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main mysql-common all 5.5.32-0ubuntu7 [13.0 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libmysqlclient18 amd64 5.5.32-0ubuntu7 [929 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal amd64 2.7.5-8ubuntu3 [504 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib amd64 2.7.5-8ubuntu3 [2487 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 amd64 2.7.5-8ubuntu3 [1353 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev amd64 2.1.0-4 [212 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev amd64 2.7.5-8ubuntu3 [23.5 MB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 amd64 0.9.3-5ubuntu1 [430 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal amd64 2.7.5-8ubuntu3 [1512 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/universe wise-data all 2.4.1-14 [33.9 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/universe wise amd64 2.4.1-14 [951 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main python3.3 amd64 3.3.2-7ubuntu3 [129 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal amd64 3.3.2-14ubuntu1 [26.6 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib amd64 3.3.2-14ubuntu1 [8146 B] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main python3 amd64 3.3.2-14ubuntu1 [9166 B] Get:36 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-python all 1.20131021-1 [62.1 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main file amd64 5.11-2ubuntu4 [18.4 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main netbase all 5.1 [13.9 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main openssl amd64 1.0.1e-3ubuntu1 [525 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main ca-certificates all 20130906 [196 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base amd64 0.18.3.1-1ubuntu1 [78.9 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main autoconf all 2.69-1.1 [573 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main autotools-dev all 20130810.1 [44.3 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main automake all 1:1.13.3-1.1ubuntu2 [573 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main gettext amd64 0.18.3.1-1ubuntu1 [1033 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty-proposed/main apparmor-easyprof all 2.8.0-0ubuntu32 [23.3 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-apparmor all 2.8.0-0ubuntu32 [7830 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130921ubuntu1 [635 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main liburi-perl all 1.60-1 [89.6 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main libencode-locale-perl all 1.03-1 [12.4 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-date-perl all 6.02-1 [10.4 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main libfile-listing-perl all 6.04-1 [9774 B] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tagset-perl all 3.20-2 [13.5 kB] Get:56 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libhtml-parser-perl amd64 3.71-1build1 [98.2 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tree-perl all 5.03-1 [215 kB] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main libio-html-perl all 1.00-1 [15.7 kB] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main liblwp-mediatypes-perl all 6.02-1 [21.7 kB] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-message-perl all 6.06-1 [78.7 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-cookies-perl all 6.00-2 [23.3 kB] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-negotiate-perl all 6.00-2 [13.4 kB] Get:63 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libnet-ssleay-perl amd64 1.55-1build1 [311 kB] Get:64 http://ftpmaster.internal/ubuntu/ trusty/main libio-socket-ssl-perl all 1.76-2ubuntu1 [51.4 kB] Get:65 http://ftpmaster.internal/ubuntu/ trusty/main libnet-http-perl all 6.06-1 [24.2 kB] Get:66 http://ftpmaster.internal/ubuntu/ trusty/main liblwp-protocol-https-perl all 6.04-1 [7190 B] Get:67 http://ftpmaster.internal/ubuntu/ trusty/main libwww-robotrules-perl all 6.01-1 [14.1 kB] Get:68 http://ftpmaster.internal/ubuntu/ trusty/main libwww-perl all 6.05-1 [155 kB] Get:69 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libxml-parser-perl amd64 2.41-1build3 [294 kB] Get:70 http://ftpmaster.internal/ubuntu/ trusty/main intltool all 0.50.2-2 [52.0 kB] Get:71 http://ftpmaster.internal/ubuntu/ trusty/main dh-translations all 118 [21.9 kB] Get:72 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 amd64 2.7.5-8ubuntu3 [192 kB] Get:73 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal amd64 2.7.5-5ubuntu1 [31.4 kB] Get:74 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib amd64 2.7.5-5ubuntu1 [7768 B] Get:75 http://ftpmaster.internal/ubuntu/ trusty/main python amd64 2.7.5-5ubuntu1 [171 kB] Get:76 http://ftpmaster.internal/ubuntu/ trusty/main python-scour all 0.26-3 [46.5 kB] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main cdbs all 0.4.122ubuntu1 [49.1 kB] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 amd64 1.2.20110419-7 [215 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 amd64 3.4.2+dfsg-4 [2506 kB] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev amd64 2.7.5-5ubuntu1 [7846 B] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main libpython-all-dev amd64 2.7.5-5ubuntu1 [946 B] Get:82 http://ftpmaster.internal/ubuntu/ trusty/main python-all amd64 2.7.5-5ubuntu1 [934 B] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev amd64 2.7.5-8ubuntu3 [288 kB] Get:84 http://ftpmaster.internal/ubuntu/ trusty/main python-dev amd64 2.7.5-5ubuntu1 [1128 B] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main python-all-dev amd64 2.7.5-5ubuntu1 [950 B] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main python-mysqldb amd64 1.2.3-2 [63.8 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy amd64 1:1.7.1-1ubuntu1 [2012 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main python-reportlab all 2.6-1 [582 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.5 MB in 2s (22.2 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... 12033 files and directories currently installed.) Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-4_amd64.deb) ... Selecting previously unselected package libffi6:amd64. Unpacking libffi6:amd64 (from .../libffi6_3.0.13-4_amd64.deb) ... Selecting previously unselected package libmagic1:amd64. Unpacking libmagic1:amd64 (from .../libmagic1_5.11-2ubuntu4_amd64.deb) ... Selecting previously unselected package libpython3.3-minimal:amd64. Unpacking libpython3.3-minimal:amd64 (from .../libpython3.3-minimal_3.3.2-7ubuntu3_amd64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.54ubuntu1_all.deb) ... Selecting previously unselected package libpython3.3-stdlib:amd64. Unpacking libpython3.3-stdlib:amd64 (from .../libpython3.3-stdlib_3.3.2-7ubuntu3_amd64.deb) ... Selecting previously unselected package python3.3-minimal. Unpacking python3.3-minimal (from .../python3.3-minimal_3.3.2-7ubuntu3_amd64.deb) ... Selecting previously unselected package libasprintf0c2:amd64. Unpacking libasprintf0c2:amd64 (from .../libasprintf0c2_0.18.3.1-1ubuntu1_amd64.deb) ... Selecting previously unselected package libglib2.0-0:amd64. Unpacking libglib2.0-0:amd64 (from .../libglib2.0-0_2.38.1-1_amd64.deb) ... Selecting previously unselected package libpipeline1:amd64. Unpacking libpipeline1:amd64 (from .../libpipeline1_1.2.4-1_amd64.deb) ... Selecting previously unselected package libxml2:amd64. Unpacking libxml2:amd64 (from .../libxml2_2.9.1+dfsg1-3ubuntu2_amd64.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.22.2-3_amd64.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_9.0.5ubuntu1_amd64.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.5-2_amd64.deb) ... Selecting previously unselected package libsigsegv2:amd64. 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Unpacking python-reportlab (from .../python-reportlab_2.6-1_all.deb) ... Setting up libexpat1:amd64 (2.1.0-4) ... Setting up libffi6:amd64 (3.0.13-4) ... Setting up libmagic1:amd64 (5.11-2ubuntu4) ... Setting up libpython3.3-minimal:amd64 (3.3.2-7ubuntu3) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.3-stdlib:amd64 (3.3.2-7ubuntu3) ... Setting up python3.3-minimal (3.3.2-7ubuntu3) ... Setting up libasprintf0c2:amd64 (0.18.3.1-1ubuntu1) ... Setting up libglib2.0-0:amd64 (2.38.1-1) ... No schema files found: doing nothing. Setting up libpipeline1:amd64 (1.2.4-1) ... Setting up libxml2:amd64 (2.9.1+dfsg1-3ubuntu2) ... Setting up groff-base (1.22.2-3) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libsigsegv2:amd64 (2.10-2) ... Setting up m4 (1.4.17-1) ... Setting up libfl-dev:amd64 (2.5.35-10.1ubuntu1) ... Setting up flex (2.5.35-10.1ubuntu1) ... Setting up libcroco3:amd64 (0.6.8-2) ... Setting up libgfortran3:amd64 (4.8.2-1ubuntu2) ... Setting up mysql-common (5.5.32-0ubuntu7) ... Setting up libmysqlclient18:amd64 (5.5.32-0ubuntu7) ... Setting up libpython2.7-minimal:amd64 (2.7.5-8ubuntu3) ... Setting up libpython2.7-stdlib:amd64 (2.7.5-8ubuntu3) ... Setting up libpython2.7:amd64 (2.7.5-8ubuntu3) ... Setting up libexpat1-dev:amd64 (2.1.0-4) ... Setting up libpython2.7-dev:amd64 (2.7.5-8ubuntu3) ... Setting up libunistring0:amd64 (0.9.3-5ubuntu1) ... Setting up python2.7-minimal (2.7.5-8ubuntu3) ... Linking and byte-compiling packages for runtime python2.7... Setting up wise-data (2.4.1-14) ... Setting up wise (2.4.1-14) ... Setting up python3.3 (3.3.2-7ubuntu3) ... Setting up python3-minimal (3.3.2-14ubuntu1) ... Setting up libpython3-stdlib:amd64 (3.3.2-14ubuntu1) ... Setting up file (5.11-2ubuntu4) ... Setting up netbase (5.1) ... Setting up openssl (1.0.1e-3ubuntu1) ... Setting up ca-certificates (20130906) ... Setting up gettext-base (0.18.3.1-1ubuntu1) ... Setting up autoconf (2.69-1.1) ... Setting up autotools-dev (20130810.1) ... Setting up automake (1:1.13.3-1.1ubuntu2) ... update-alternatives: using /usr/bin/automake-1.13 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.18.3.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up liburi-perl (1.60-1) ... Setting up libencode-locale-perl (1.03-1) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.71-1build1) ... Setting up libhtml-tree-perl (5.03-1) ... Setting up libio-html-perl (1.00-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libhttp-message-perl (6.06-1) ... Setting up libhttp-cookies-perl (6.00-2) ... Setting up libhttp-negotiate-perl (6.00-2) ... Setting up libnet-ssleay-perl (1.55-1build1) ... Setting up libio-socket-ssl-perl (1.76-2ubuntu1) ... Setting up libnet-http-perl (6.06-1) ... Setting up libwww-robotrules-perl (6.01-1) ... Setting up python2.7 (2.7.5-8ubuntu3) ... Setting up python-minimal (2.7.5-5ubuntu1) ... Setting up libpython-stdlib:amd64 (2.7.5-5ubuntu1) ... Setting up python (2.7.5-5ubuntu1) ... Setting up python-scour (0.26-3) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.4.2+dfsg-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython-dev:amd64 (2.7.5-5ubuntu1) ... Setting up libpython-all-dev:amd64 (2.7.5-5ubuntu1) ... Setting up python-all (2.7.5-5ubuntu1) ... Setting up python2.7-dev (2.7.5-8ubuntu3) ... Setting up python-dev (2.7.5-5ubuntu1) ... Setting up python-all-dev (2.7.5-5ubuntu1) ... Setting up python-mysqldb (1.2.3-2) ... Setting up python-numpy (1:1.7.1-1ubuntu1) ... Setting up python-reportlab (2.6-1) ... Setting up libwww-perl (6.05-1) ... Setting up libxml-parser-perl (2.41-1build3) ... Setting up intltool (0.50.2-2) ... Setting up python3 (3.3.2-14ubuntu1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131021-1) ... Setting up apparmor-easyprof (2.8.0-0ubuntu32) ... Setting up dh-apparmor (2.8.0-0ubuntu32) ... Setting up debhelper (9.20130921ubuntu1) ... Setting up liblwp-protocol-https-perl (6.04-1) ... Setting up dh-translations (118) ... Setting up cdbs (0.4.122ubuntu1) ... Processing triggers for libc-bin ... Processing triggers for ca-certificates ... Updating certificates in /etc/ssl/certs... 164 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.16.12ubuntu1 gcc-4.8_4.8.2-1ubuntu2 g++-4.8_4.8.2-1ubuntu2 binutils_2.23.90.20131017-1ubuntu1 libstdc++-4.8-dev_4.8.2-1ubuntu2 libstdc++6_4.8.2-1ubuntu2 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Sun Sep 15 19:23:50 2013 UTC using DSA key ID EB88E930 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./python-biopython_1.62-1.dsc dpkg-source: info: extracting python-biopython in python-biopython-1.62 dpkg-source: info: unpacking python-biopython_1.62.orig.tar.gz dpkg-source: info: unpacking python-biopython_1.62-1.debian.tar.gz dpkg-buildpackage: source package python-biopython dpkg-buildpackage: source version 1.62-1 dpkg-source --before-build python-biopython-1.62 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_clean cd . && \ python setup.py clean \ -a running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it for buildver in 2.7; do \ cd /build/buildd/python-biopython-1.62 && cd . && \ python$buildver setup.py clean \ -a; \ done running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it rm -rf debian/python-module-stampdir find "/build/buildd/python-biopython-1.62" -name '*.py[co]' -delete find "/build/buildd/python-biopython-1.62" -name __pycache__ -type d -empty -delete find "/build/buildd/python-biopython-1.62" -prune -name '*.egg-info' -exec rm -rf '{}' ';' debian/rules build-arch test -x debian/rules mkdir -p "." mkdir -p debian/python-module-stampdir set -e; for buildver in 2.7; do \ cd /build/buildd/python-biopython-1.62 && cd . && \ python$buildver setup.py build \ --build-base="/build/buildd/python-biopython-1.62/./build"; \ done running build running build_py creating /build/buildd/python-biopython-1.62/build creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7 creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio copying Bio/_utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/DocSQL.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/LogisticRegression.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/SeqFeature.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/File.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/MaxEntropy.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/pairwise2.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/Index.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/bgzf.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/NaiveBayes.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/kNN.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/Search.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/ParserSupport.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/SeqRecord.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/MarkovModel.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/HotRand.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/triefind.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio copying Bio/Seq.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Align copying Bio/Align/AlignInfo.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align copying Bio/Align/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align copying Bio/Align/Generic.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Align/Applications creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/AlignIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Alphabet creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Application copying Bio/Application/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Application creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/Record.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIXML.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIStandalone.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/Applications.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Blast creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/CAPS copying Bio/CAPS/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/CAPS creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Compass copying Bio/Compass/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Compass creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Crystal copying Bio/Crystal/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Crystal creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Data copying Bio/Data/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Data copying Bio/Data/SCOPData.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Data copying Bio/Data/IUPACData.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Data copying Bio/Data/CodonTable.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Data creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Emboss copying Bio/Emboss/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Emboss copying Bio/Emboss/Primer3.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Emboss copying Bio/Emboss/Applications.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Emboss creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Entrez copying Bio/Entrez/Parser.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez copying Bio/Entrez/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/ExPASy creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/FSSP copying Bio/FSSP/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/FSSP creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GA copying Bio/GA/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA copying Bio/GA/Organism.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA copying Bio/GA/Evolver.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/General.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/GeneralPoint.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/TwoPoint.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Uniform.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Point.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Crossover creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/General.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/Simple.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Mutation creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GA/Repair copying Bio/GA/Repair/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Repair copying Bio/GA/Repair/Stabilizing.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Repair creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/RouletteWheel.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Diversity.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Tournament.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Abstract.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GA/Selection creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/GenBank copying Bio/GenBank/utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GenBank copying Bio/GenBank/Record.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GenBank copying Bio/GenBank/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GenBank copying Bio/GenBank/Scanner.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/GenBank creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Geo copying Bio/Geo/Record.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Geo copying Bio/Geo/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Geo creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/Comparative.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics copying Bio/Graphics/Distribution.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/HMM copying Bio/HMM/Utilities.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/HMM copying Bio/HMM/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/HMM copying Bio/HMM/Trainer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/HMM copying Bio/HMM/MarkovModel.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/HMM creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/KEGG copying Bio/KEGG/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KEGG creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KEGG/Compound creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KEGG/Enzyme creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KEGG/Map creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Medline copying Bio/Medline/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Medline creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Motif copying Bio/Motif/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif copying Bio/Motif/Thresholds.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif copying Bio/Motif/_Motif.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/MAST.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/MEME.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/AlignAce.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Parsers creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Motif/Applications copying Bio/Motif/Applications/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Applications copying Bio/Motif/Applications/_XXmotif.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Applications copying Bio/Motif/Applications/_AlignAce.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/Applications creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/alignace.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/thresholds.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/mast.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/meme.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/transfac.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs copying Bio/motifs/matrix.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/applications copying Bio/motifs/applications/_alignace.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/applications creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/jaspar creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/Training.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/StopTraining.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Layer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Network.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Schema.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Signature.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Motif.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Pattern.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Trees.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Nexus.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Nexus copying Bio/Nexus/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Nodes.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Nexus creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/NMR copying Bio/NMR/xpktools.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NMR copying Bio/NMR/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NMR copying Bio/NMR/NOEtools.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/NMR creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Pathway copying Bio/Pathway/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Pathway creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Pathway/Rep creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Dice.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Structure.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Residue.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/HSExposure.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBList.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBParser.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Atom.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Entity.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Superimposer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/PSEA.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Selection.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Vector.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/DSSP.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Model.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Chain.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/Polypeptide.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB copying Bio/PDB/NACCESS.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PDB creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen copying Bio/PopGen/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/Local.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/Async creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Async.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Controller.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/FDist creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Async.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Template.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Controller.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Cache.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction copying Bio/Restriction/Restriction.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction copying Bio/Restriction/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/Update.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/RestrictionCompiler.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Restriction/_Update creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Dom.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Des.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Raf.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Cla.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/three_to_one_dict.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Residues.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Hie.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SCOP creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/_index.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/_model creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/_index.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/_convert.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqIO creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SeqUtils creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Statistics copying Bio/Statistics/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Statistics copying Bio/Statistics/lowess.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Statistics creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SubsMat creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/SVDSuperimposer.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/SwissProt creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/TogoWS creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_utils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NeXML.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_io.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/CDAO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/Newick.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/Applications creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Phylo/PAML creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/UniGene copying Bio/UniGene/UniGene.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/UniGene copying Bio/UniGene/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/UniGene creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/UniProt copying Bio/UniProt/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/UniProt copying Bio/UniProt/GOA.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/UniProt creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Wise copying Bio/Wise/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Wise copying Bio/Wise/dnal.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Wise copying Bio/Wise/psw.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Wise creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/_py3k copying Bio/_py3k/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/_py3k copying Bio/_py3k/_ordereddict.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/_py3k creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/BioSQL copying BioSQL/Loader.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/BioSQL copying BioSQL/BioSeqDatabase.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/BioSQL copying BioSQL/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/BioSQL copying BioSQL/BioSeq.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/BioSQL copying BioSQL/DBUtils.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/BioSQL creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Affy copying Bio/Affy/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Affy copying Bio/Affy/CelFile.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Affy creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Cluster copying Bio/Cluster/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Cluster creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/KDTree copying Bio/KDTree/KDTree.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KDTree copying Bio/KDTree/__init__.py -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KDTree creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs creating /build/buildd/python-biopython-1.62/build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_1d.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_2d.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/island.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_split.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/bottle.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/simple.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_island.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_lambda.par -> /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data running build_ext building 'Bio.cpairwise2' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7 creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/cpairwise2module.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/cpairwise2module.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/cpairwise2module.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/cpairwise2.so building 'Bio.trie' extension x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/triemodule.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/triemodule.o x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -IBio -I/usr/include/python2.7 -c Bio/trie.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/trie.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/triemodule.o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/trie.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/trie.so building 'Bio.Nexus.cnexus' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio/Nexus x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c Bio/Nexus/cnexus.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Nexus/cnexus.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Nexus/cnexus.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Nexus/cnexus.so building 'Bio.Cluster.cluster' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio/Cluster x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Cluster/clustermodule.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Cluster/clustermodule.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from Bio/Cluster/clustermodule.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Cluster/cluster.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Cluster/cluster.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Cluster/clustermodule.o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Cluster/cluster.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Cluster/cluster.so building 'Bio.KDTree._CKDTree' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio/KDTree x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/KDTree/KDTree.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/KDTree/KDTree.o x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/KDTree/KDTreemodule.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from Bio/KDTree/KDTreemodule.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/KDTree/KDTree.o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/KDTree/KDTreemodule.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/KDTree/_CKDTree.so building 'Bio.Motif._pwm' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio/Motif x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Motif/_pwm.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Motif/_pwm.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from Bio/Motif/_pwm.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/Motif/_pwm.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/Motif/_pwm.so building 'Bio.motifs._pwm' extension creating /build/buildd/python-biopython-1.62/build/temp.linux-x86_64-2.7/Bio/motifs x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/motifs/_pwm.c -o /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/motifs/_pwm.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from Bio/motifs/_pwm.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 /build/buildd/python-biopython-1.62/./build/temp.linux-x86_64-2.7/Bio/motifs/_pwm.o -o /build/buildd/python-biopython-1.62/./build/lib.linux-x86_64-2.7/Bio/motifs/_pwm.so touch debian/python-module-stampdir/python-biopython /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." mkdir -p debian/python-module-stampdir set -e; for buildver in 2.7; do \ cd /build/buildd/python-biopython-1.62 && cd . && \ python$buildver setup.py build \ --build-base="/build/buildd/python-biopython-1.62/./build"; \ done running build running build_py running build_ext touch debian/python-module-stampdir/python-biopython Adding cdbs dependencies to debian/python-biopython.substvars dh_installdirs -ppython-biopython set -e; for buildver in 2.7; do \ cd /build/buildd/python-biopython-1.62 && cd . && \ python$buildver setup.py install \ --root="/build/buildd/python-biopython-1.62/debian/tmp/" \ --install-purelib=/usr/lib/python$buildver/site-packages/ \ --install-platlib=/usr/lib/python$buildver/site-packages/ \ --prefix=/usr --no-compile -O0 ; \ done running install running build running build_py running build_ext running install_lib creating /build/buildd/python-biopython-1.62/debian/tmp creating /build/buildd/python-biopython-1.62/debian/tmp/usr creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7 creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/trie.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-2.7/Bio/SwissProt/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-2.7/Bio/SwissProt/KeyWList.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SwissProt creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-x86_64-2.7/Bio/Data/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-x86_64-2.7/Bio/Data/SCOPData.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-x86_64-2.7/Bio/Data/IUPACData.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-x86_64-2.7/Bio/Data/CodonTable.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Data creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniProt copying build/lib.linux-x86_64-2.7/Bio/UniProt/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniProt copying build/lib.linux-x86_64-2.7/Bio/UniProt/GOA.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniProt creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-x86_64-2.7/Bio/NMR/xpktools.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-x86_64-2.7/Bio/NMR/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-x86_64-2.7/Bio/NMR/NOEtools.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-x86_64-2.7/Bio/_utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-x86_64-2.7/Bio/Restriction/RanaConfig.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-x86_64-2.7/Bio/Restriction/Restriction.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-x86_64-2.7/Bio/Restriction/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-x86_64-2.7/Bio/Restriction/PrintFormat.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-x86_64-2.7/Bio/Restriction/_Update/Update.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-x86_64-2.7/Bio/Restriction/_Update/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-x86_64-2.7/Bio/Restriction/_Update/RestrictionCompiler.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-x86_64-2.7/Bio/Restriction/Restriction_Dictionary.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Application copying build/lib.linux-x86_64-2.7/Bio/Application/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Application creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-x86_64-2.7/Bio/Motif/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-x86_64-2.7/Bio/Motif/Thresholds.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-x86_64-2.7/Bio/Motif/Applications/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-x86_64-2.7/Bio/Motif/Applications/_XXmotif.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-x86_64-2.7/Bio/Motif/Applications/_AlignAce.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-x86_64-2.7/Bio/Motif/_pwm.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-x86_64-2.7/Bio/Motif/_Motif.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-x86_64-2.7/Bio/Motif/Parsers/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-x86_64-2.7/Bio/Motif/Parsers/MAST.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-x86_64-2.7/Bio/Motif/Parsers/MEME.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-x86_64-2.7/Bio/Motif/Parsers/AlignAce.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Motif/Parsers creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer/SVDSuperimposer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.linux-x86_64-2.7/Bio/DocSQL.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/LogisticRegression.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-x86_64-2.7/Bio/Wise/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-x86_64-2.7/Bio/Wise/dnal.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-x86_64-2.7/Bio/Wise/psw.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Wise creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG copying build/lib.linux-x86_64-2.7/Bio/KEGG/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Map copying build/lib.linux-x86_64-2.7/Bio/KEGG/Map/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Map creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-x86_64-2.7/Bio/KEGG/Enzyme/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Enzyme creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Compound copying build/lib.linux-x86_64-2.7/Bio/KEGG/Compound/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KEGG/Compound copying build/lib.linux-x86_64-2.7/Bio/SeqFeature.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/Graphics/DisplayRepresentation.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Diagram.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Graph.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Feature.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Colors.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Track.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-2.7/Bio/Graphics/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/Graphics/Comparative.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/Graphics/BasicChromosome.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/Graphics/ColorSpiral.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/Graphics/Distribution.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-x86_64-2.7/Bio/File.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Compass copying build/lib.linux-x86_64-2.7/Bio/Compass/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Compass creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniGene copying build/lib.linux-x86_64-2.7/Bio/UniGene/UniGene.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniGene copying build/lib.linux-x86_64-2.7/Bio/UniGene/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/UniGene creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez copying build/lib.linux-x86_64-2.7/Bio/Entrez/Parser.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez copying build/lib.linux-x86_64-2.7/Bio/Entrez/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/mathmlsetup.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/link.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/list.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/taxon.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isolat1.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/mmlalias.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/default-mixes.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eLink_101123.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PRF_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/common.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isolat2.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamsn.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/archivearticle.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pmc-1.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isotech.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/HomoloGene.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/journalmeta.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isocyr2.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamso.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/default-classes.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/notat.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isogrk2.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isogrk3.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-modules.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/elink_020122.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isomscr.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/mmlextra.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isomopf.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/SP_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isogrk1.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamsa.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eSpell.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_all.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PDB_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/egquery.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/backmatter.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isodia.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/chars.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/references.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/phrase.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamsr.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/mathml2.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/articlemeta.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isobox.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/GenBank_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isomfrk.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/xmlspecchars.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/display.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isopub.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NSE.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/OMSSA.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/math.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isogrk4.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Project.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PIR_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isocyr1.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/EMBL_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/eLink_090910.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-models.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isonum.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/para.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamsc.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NSE.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/isoamsb.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_General.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/section.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/modules.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/htmltable.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/format.ent -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/QualityIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/IgIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/PhdIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/SeqXmlIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/AbiIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/_index.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/PdbIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/TabIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/PirIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/_convert.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/SffIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/Interfaces.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/SwissIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/FastaIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/UniprotIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/AceIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-2.7/Bio/SeqIO/InsdcIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Crystal copying build/lib.linux-x86_64-2.7/Bio/Crystal/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Crystal creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-x86_64-2.7/Bio/FSSP/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-x86_64-2.7/Bio/FSSP/FSSPTools.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-x86_64-2.7/Bio/FSSP/fssp_rec.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/FSSP creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/HMM/Utilities.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/HMM/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/HMM/Trainer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/HMM/DynamicProgramming.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/HMM/MarkovModel.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-x86_64-2.7/Bio/MaxEntropy.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-x86_64-2.7/Bio/Emboss/PrimerSearch.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-x86_64-2.7/Bio/Emboss/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-x86_64-2.7/Bio/Emboss/Primer3.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-x86_64-2.7/Bio/Emboss/Applications.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Emboss creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-x86_64-2.7/Bio/Nexus/Trees.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-x86_64-2.7/Bio/Nexus/Nexus.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-x86_64-2.7/Bio/Nexus/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-x86_64-2.7/Bio/Nexus/Nodes.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-x86_64-2.7/Bio/Nexus/cnexus.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Nexus creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Dom.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Des.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Raf.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Cla.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/three_to_one_dict.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Residues.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/SCOP/Hie.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-x86_64-2.7/Bio/pairwise2.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-2.7/Bio/Alphabet/IUPAC.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-2.7/Bio/Alphabet/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-2.7/Bio/Alphabet/Reduced.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Alphabet creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/ExPASy/Prodoc.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/ExPASy/ScanProsite.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/ExPASy/Prosite.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/ExPASy/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/ExPASy/Enzyme.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-2.7/Bio/Index.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-x86_64-2.7/Bio/GenBank/utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-x86_64-2.7/Bio/GenBank/Record.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-x86_64-2.7/Bio/GenBank/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-x86_64-2.7/Bio/GenBank/Scanner.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GenBank creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-2.7/Bio/Sequencing/Phd.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-2.7/Bio/Sequencing/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications/_Novoalign.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-2.7/Bio/Sequencing/Applications/_bwa.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-2.7/Bio/Sequencing/Ace.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-2.7/Bio/bgzf.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/Record.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/NCBIXML.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/NCBIStandalone.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/Applications.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/NCBIWWW.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-x86_64-2.7/Bio/Blast/ParseBlastTable.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Blast creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-x86_64-2.7/Bio/KDTree/KDTree.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-x86_64-2.7/Bio/KDTree/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-x86_64-2.7/Bio/KDTree/_CKDTree.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/KDTree creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Dice.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Structure.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/ResidueDepth.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Residue.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/HSExposure.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/PDBList.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/PDBParser.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/PDBIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/MMCIF2Dict.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Atom.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Entity.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/parse_pdb_header.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Superimposer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/MMCIFParser.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/PSEA.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/AbstractPropertyMap.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/StructureBuilder.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Selection.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/StructureAlignment.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Vector.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/DSSP.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Model.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Chain.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/FragmentMapper.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/PDBExceptions.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/NeighborSearch.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/Polypeptide.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-x86_64-2.7/Bio/PDB/NACCESS.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PDB creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-x86_64-2.7/Bio/PopGen/FDist/Async.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-x86_64-2.7/Bio/PopGen/FDist/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-x86_64-2.7/Bio/PopGen/FDist/Controller.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-x86_64-2.7/Bio/PopGen/FDist/Utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-x86_64-2.7/Bio/PopGen/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/Async.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/Template.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/Controller.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/ssm_1d.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/ssm_2d.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/island.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/decline_split.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/bottle.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/simple.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/split_island.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/data/decline_lambda.par -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-x86_64-2.7/Bio/PopGen/SimCoal/Cache.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/FileParser.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/EasyController.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/Controller.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/Utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-2.7/Bio/PopGen/GenePop/LargeFileParser.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-x86_64-2.7/Bio/PopGen/Async/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-x86_64-2.7/Bio/PopGen/Async/Local.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-x86_64-2.7/Bio/NaiveBayes.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/kNN.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/Search.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-2.7/Bio/motifs/applications/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-2.7/Bio/motifs/applications/_alignace.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-2.7/Bio/motifs/applications/_xxmotif.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-2.7/Bio/motifs/alignace.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/thresholds.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/mast.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/_pwm.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/meme.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/transfac.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs copying build/lib.linux-x86_64-2.7/Bio/motifs/matrix.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-2.7/Bio/motifs/jaspar/db.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-2.7/Bio/motifs/jaspar/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/motifs/jaspar creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Cluster copying build/lib.linux-x86_64-2.7/Bio/Cluster/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Cluster copying build/lib.linux-x86_64-2.7/Bio/Cluster/cluster.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Cluster creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align copying build/lib.linux-x86_64-2.7/Bio/Align/AlignInfo.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align copying build/lib.linux-x86_64-2.7/Bio/Align/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Dialign.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_TCoffee.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Mafft.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Clustalw.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Probcons.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_ClustalOmega.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Prank.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Applications/_Muscle.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-2.7/Bio/Align/Generic.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Align creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Affy copying build/lib.linux-x86_64-2.7/Bio/Affy/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Affy copying build/lib.linux-x86_64-2.7/Bio/Affy/CelFile.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Affy creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Statistics copying build/lib.linux-x86_64-2.7/Bio/Statistics/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Statistics copying build/lib.linux-x86_64-2.7/Bio/Statistics/lowess.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Statistics creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/IsoelectricPoint.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/ProtParamData.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/MeltingTemp.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/CodonUsageIndices.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/lcc.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/ProtParam.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/CheckSum.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-2.7/Bio/SeqUtils/CodonUsage.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SeqUtils creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/General.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/GeneralPoint.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/TwoPoint.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/Uniform.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-x86_64-2.7/Bio/GA/Crossover/Point.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Crossover creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.linux-x86_64-2.7/Bio/GA/Repair/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.linux-x86_64-2.7/Bio/GA/Repair/Stabilizing.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.linux-x86_64-2.7/Bio/GA/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA copying build/lib.linux-x86_64-2.7/Bio/GA/Organism.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Selection/RouletteWheel.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Selection/Diversity.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Selection/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Selection/Tournament.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Selection/Abstract.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-x86_64-2.7/Bio/GA/Evolver.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-x86_64-2.7/Bio/GA/Mutation/General.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-x86_64-2.7/Bio/GA/Mutation/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-x86_64-2.7/Bio/GA/Mutation/Simple.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-x86_64-2.7/Bio/ParserSupport.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/CAPS copying build/lib.linux-x86_64-2.7/Bio/CAPS/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/CAPS copying build/lib.linux-x86_64-2.7/Bio/SeqRecord.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/_utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/NeXMLIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/PhyloXML.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/BaseTree.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/NeXML.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/_parse_codeml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/yn00.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/_parse_yn00.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/baseml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/_parse_baseml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/codeml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/_paml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/PAML/chi2.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-2.7/Bio/Phylo/_io.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-2.7/Bio/Phylo/Applications/_Fasttree.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-2.7/Bio/Phylo/Applications/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-2.7/Bio/Phylo/Applications/_Raxml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-2.7/Bio/Phylo/Applications/_Phyml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-2.7/Bio/Phylo/CDAO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/PhyloXMLIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/NewickIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/NexusIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/CDAOIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/Newick.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-x86_64-2.7/Bio/Phylo/_cdao_owl.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Phylo creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Geo copying build/lib.linux-x86_64-2.7/Bio/Geo/Record.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Geo copying build/lib.linux-x86_64-2.7/Bio/Geo/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Geo copying build/lib.linux-x86_64-2.7/Bio/MarkovModel.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/StockholmIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/Interfaces.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/FastaIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/NexusIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/ClustalIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/EmbossIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-2.7/Bio/AlignIO/PhylipIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/AlignIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/_py3k copying build/lib.linux-x86_64-2.7/Bio/_py3k/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/_py3k copying build/lib.linux-x86_64-2.7/Bio/_py3k/_ordereddict.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/_py3k copying build/lib.linux-x86_64-2.7/Bio/HotRand.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-x86_64-2.7/Bio/triefind.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway copying build/lib.linux-x86_64-2.7/Bio/Pathway/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-2.7/Bio/Pathway/Rep/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-2.7/Bio/Pathway/Rep/MultiGraph.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-2.7/Bio/Pathway/Rep/Graph.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Pathway/Rep creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene/Schema.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene/Signature.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene/Motif.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Gene/Pattern.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/Layer.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/Network.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/Training.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.linux-x86_64-2.7/Bio/NeuralNetwork/StopTraining.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/NeuralNetwork creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_utils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO/_base.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/BlatIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_index.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO/blast_text.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO/blast_xml.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/BlastIO/blast_tab.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/FastaIO.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/_base.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_model/hsp.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_model/_base.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_model/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_model/query.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-2.7/Bio/SearchIO/_model/hit.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SearchIO/_model creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.linux-x86_64-2.7/Bio/TogoWS/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.linux-x86_64-2.7/Bio/Seq.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Medline copying build/lib.linux-x86_64-2.7/Bio/Medline/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/Medline copying build/lib.linux-x86_64-2.7/Bio/cpairwise2.so -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-2.7/Bio/SubsMat/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-2.7/Bio/SubsMat/FreqTable.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-2.7/Bio/SubsMat/MatrixInfo.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/Bio/SubsMat creating /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-x86_64-2.7/BioSQL/Loader.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-x86_64-2.7/BioSQL/BioSeqDatabase.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-x86_64-2.7/BioSQL/__init__.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-x86_64-2.7/BioSQL/BioSeq.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-x86_64-2.7/BioSQL/DBUtils.py -> /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/BioSQL running install_egg_info Writing /build/buildd/python-biopython-1.62/debian/tmp/usr/lib/python2.7/site-packages/biopython-1.62-py2.7.egg-info dh_installdocs -ppython-biopython ./README ./NEWS dh_installexamples -ppython-biopython dh_installman -ppython-biopython dh_installinfo -ppython-biopython dh_installmenu -ppython-biopython dh_installcron -ppython-biopython dh_installinit -ppython-biopython dh_installdebconf -ppython-biopython dh_installemacsen -ppython-biopython dh_installcatalogs -ppython-biopython dh_installpam -ppython-biopython dh_installlogrotate -ppython-biopython dh_installlogcheck -ppython-biopython dh_installchangelogs -ppython-biopython dh_installudev -ppython-biopython dh_lintian -ppython-biopython dh_bugfiles -ppython-biopython dh_install -ppython-biopython dh_link -ppython-biopython dh_installmime -ppython-biopython dh_installgsettings -ppython-biopython dh_python2 -ppython-biopython dh_numpy -ppython-biopython dh_strip -ppython-biopython dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: python-biopython dh_strip debug symbol extraction: packages to act on: python-biopython dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-deb: building package `python-biopython-dbgsym' in `../python-biopython-dbgsym_1.62-1_amd64.ddeb'. dh_compress -ppython-biopython dh_fixperms -ppython-biopython dh_makeshlibs -ppython-biopython dh_installdeb -ppython-biopython dh_perl -ppython-biopython dh_shlibdeps -ppython-biopython dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/cpairwise2.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/trie.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Cluster/cluster.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/Motif/_pwm.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/motifs/_pwm.so debian/python-biopython/usr/lib/python2.7/dist-packages/Bio/KDTree/_CKDTree.so were not linked against libpthread.so.0 (they use none of the library's symbols) dh_gencontrol -ppython-biopython dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package python-biopython: unused substitution variable ${python:Versions} # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -ppython-biopython ; fi dh_md5sums -ppython-biopython dh_builddeb -ppython-biopython INFO: pkgstriptranslations version 118 pkgstriptranslations: processing python-biopython (in debian/python-biopython); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-biopython/DEBIAN/control, package python-biopython, directory debian/python-biopython pkgstripfiles: Truncating usr/share/doc/python-biopython/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package python-biopython took 0 s dpkg-deb: warning: 'debian/python-biopython/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `python-biopython' in `../python-biopython_1.62-1_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../python-biopython_1.62-1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build python-biopython-1.62 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131022-1010 Publishing debug debs. chroot-autobuild/build/buildd/python-biopython_1.62-1_amd64.deb: new debian package, version 2.0. size 1612684 bytes: control archive= 17836 bytes. 1403 bytes, 28 lines control 49113 bytes, 596 lines md5sums 166 bytes, 9 lines * postinst #!/bin/sh 269 bytes, 14 lines * prerm #!/bin/sh Package: python-biopython Version: 1.62-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 7937 Depends: python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python:any (>= 2.7.1-0ubuntu2), libc6 (>= 2.14), python-reportlab Recommends: python-biopython-doc (= 1.62-1) Suggests: python-tk, wise, muscle, clustalw, mafft, emboss, blast2, python-psycopg2, probcons Conflicts: python2.3-biopython (<< 1.42-1), python2.4-biopython (<< 1.42-1) Replaces: python2.3-biopython (<< 1.42-1), python2.4-biopython (<< 1.42-1) Provides: python2.7-biopython Section: python Priority: optional Homepage: http://biopython.org Description: Python library for bioinformatics The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. We work along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. chroot-autobuild/build/buildd/python-biopython_1.62-1_amd64.deb: drwxr-xr-x root/root 0 2013-10-22 10:10 ./ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ -rw-r--r-- root/root 24520 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/trie.so drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SwissProt/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Data/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/UniProt/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NMR/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Restriction/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Restriction/_Update/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Application/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Motif/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Motif/Applications/ -rw-r--r-- root/root 10624 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Motif/_pwm.so drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Motif/Parsers/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SVDSuperimposer/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Wise/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/KEGG/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Map/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Enzyme/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/KEGG/Compound/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Graphics/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Graphics/GenomeDiagram/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Compass/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/UniGene/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqIO/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Crystal/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/FSSP/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/HMM/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Emboss/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Nexus/ -rw-r--r-- root/root 6240 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Nexus/cnexus.so drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SCOP/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GenBank/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Blast/ drwxr-xr-x root/root 0 2013-10-22 10:10 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2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Repair/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Mutation/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/CAPS/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Geo/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/_py3k/ drwxr-xr-x root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Pathway/ drwxr-xr-x root/root 0 2013-10-22 10:10 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-> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mime.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Mime.dtd lrwxrwxrwx root/root 0 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../../../../../../share/pyshared/Bio/Entrez/DTDs/isogrk2.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_130101.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/pubmed_130101.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Entrez2.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Gene.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Gene.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isogrk3.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/isogrk3.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/archivecustom-modules.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/archivecustom-modules.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/elink_020122.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/elink_020122.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isomscr.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/isomscr.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/mmlextra.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/mmlextra.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isomopf.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/isomopf.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Biblio.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/SP_General.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/SP_General.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Organism.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Organism.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_SeqTable.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/nlmserials_080101.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/nlmserials_080101.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> 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./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_TxInit.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_BlastDL.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Access.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Access.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_2.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/Docsum_3_2.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/eSpell.dtd -> 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./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/backmatter.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/backmatter.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/Docsum_3_4.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isodia.ent -> 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./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/isonum.ent -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/isonum.ent lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/pubmed_100301.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/pubmed_100301.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/NCBI_BioTree.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> ../../../../../../share/pyshared/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> 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0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/IUPAC.py -> ../../../../../share/pyshared/Bio/Alphabet/IUPAC.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/__init__.py -> ../../../../../share/pyshared/Bio/Alphabet/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Alphabet/Reduced.py -> ../../../../../share/pyshared/Bio/Alphabet/Reduced.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/Prodoc.py -> ../../../../../share/pyshared/Bio/ExPASy/Prodoc.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/ScanProsite.py -> ../../../../../share/pyshared/Bio/ExPASy/ScanProsite.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/Prosite.py -> ../../../../../share/pyshared/Bio/ExPASy/Prosite.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ExPASy/__init__.py -> 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./usr/lib/python2.7/dist-packages/Bio/Sequencing/Phd.py -> ../../../../../share/pyshared/Bio/Sequencing/Phd.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/__init__.py -> ../../../../../share/pyshared/Bio/Sequencing/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_Novoalign.py -> ../../../../../../share/pyshared/Bio/Sequencing/Applications/_Novoalign.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/__init__.py -> ../../../../../../share/pyshared/Bio/Sequencing/Applications/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Applications/_bwa.py -> ../../../../../../share/pyshared/Bio/Sequencing/Applications/_bwa.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Sequencing/Ace.py -> ../../../../../share/pyshared/Bio/Sequencing/Ace.py lrwxrwxrwx 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./usr/lib/python2.7/dist-packages/Bio/PDB/Residue.py -> ../../../../../share/pyshared/Bio/PDB/Residue.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/HSExposure.py -> ../../../../../share/pyshared/Bio/PDB/HSExposure.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBList.py -> ../../../../../share/pyshared/Bio/PDB/PDBList.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBParser.py -> ../../../../../share/pyshared/Bio/PDB/PDBParser.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBIO.py -> ../../../../../share/pyshared/Bio/PDB/PDBIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/MMCIF2Dict.py -> ../../../../../share/pyshared/Bio/PDB/MMCIF2Dict.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Atom.py -> ../../../../../share/pyshared/Bio/PDB/Atom.py lrwxrwxrwx 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../../../../../share/pyshared/Bio/PDB/AbstractPropertyMap.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/StructureBuilder.py -> ../../../../../share/pyshared/Bio/PDB/StructureBuilder.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Selection.py -> ../../../../../share/pyshared/Bio/PDB/Selection.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/StructureAlignment.py -> ../../../../../share/pyshared/Bio/PDB/StructureAlignment.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Vector.py -> ../../../../../share/pyshared/Bio/PDB/Vector.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/DSSP.py -> ../../../../../share/pyshared/Bio/PDB/DSSP.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Model.py -> ../../../../../share/pyshared/Bio/PDB/Model.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Chain.py -> ../../../../../share/pyshared/Bio/PDB/Chain.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/FragmentMapper.py -> ../../../../../share/pyshared/Bio/PDB/FragmentMapper.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/PDBExceptions.py -> ../../../../../share/pyshared/Bio/PDB/PDBExceptions.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/NeighborSearch.py -> ../../../../../share/pyshared/Bio/PDB/NeighborSearch.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/Polypeptide.py -> ../../../../../share/pyshared/Bio/PDB/Polypeptide.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PDB/NACCESS.py -> ../../../../../share/pyshared/Bio/PDB/NACCESS.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/FDist/Async.py -> 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2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/SimCoal/data/island.par -> ../../../../../../../share/pyshared/Bio/PopGen/SimCoal/data/island.par lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/SimCoal/data/decline_split.par -> ../../../../../../../share/pyshared/Bio/PopGen/SimCoal/data/decline_split.par lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/SimCoal/data/bottle.par -> ../../../../../../../share/pyshared/Bio/PopGen/SimCoal/data/bottle.par lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/SimCoal/data/simple.par -> ../../../../../../../share/pyshared/Bio/PopGen/SimCoal/data/simple.par lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> ../../../../../../../share/pyshared/Bio/PopGen/SimCoal/data/split_ssm_1d.par lrwxrwxrwx root/root 0 2013-10-22 10:10 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./usr/lib/python2.7/dist-packages/Bio/NaiveBayes.py -> ../../../../share/pyshared/Bio/NaiveBayes.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/kNN.py -> ../../../../share/pyshared/Bio/kNN.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Search.py -> ../../../../share/pyshared/Bio/Search.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/__init__.py -> ../../../../../../share/pyshared/Bio/motifs/applications/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/_alignace.py -> ../../../../../../share/pyshared/Bio/motifs/applications/_alignace.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/applications/_xxmotif.py -> ../../../../../../share/pyshared/Bio/motifs/applications/_xxmotif.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/alignace.py -> ../../../../../share/pyshared/Bio/motifs/alignace.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/thresholds.py -> ../../../../../share/pyshared/Bio/motifs/thresholds.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/mast.py -> ../../../../../share/pyshared/Bio/motifs/mast.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/__init__.py -> ../../../../../share/pyshared/Bio/motifs/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/meme.py -> ../../../../../share/pyshared/Bio/motifs/meme.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/transfac.py -> ../../../../../share/pyshared/Bio/motifs/transfac.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/matrix.py -> ../../../../../share/pyshared/Bio/motifs/matrix.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/db.py -> ../../../../../../share/pyshared/Bio/motifs/jaspar/db.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/motifs/jaspar/__init__.py -> ../../../../../../share/pyshared/Bio/motifs/jaspar/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Cluster/__init__.py -> ../../../../../share/pyshared/Bio/Cluster/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/AlignInfo.py -> ../../../../../share/pyshared/Bio/Align/AlignInfo.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/__init__.py -> ../../../../../share/pyshared/Bio/Align/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Dialign.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Dialign.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_TCoffee.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_TCoffee.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Mafft.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Mafft.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Clustalw.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Clustalw.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/__init__.py -> ../../../../../../share/pyshared/Bio/Align/Applications/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Probcons.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Probcons.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_ClustalOmega.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_ClustalOmega.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Prank.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Prank.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Applications/_Muscle.py -> ../../../../../../share/pyshared/Bio/Align/Applications/_Muscle.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Align/Generic.py -> ../../../../../share/pyshared/Bio/Align/Generic.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Affy/__init__.py -> ../../../../../share/pyshared/Bio/Affy/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Affy/CelFile.py -> ../../../../../share/pyshared/Bio/Affy/CelFile.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Statistics/__init__.py -> ../../../../../share/pyshared/Bio/Statistics/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Statistics/lowess.py -> ../../../../../share/pyshared/Bio/Statistics/lowess.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/IsoelectricPoint.py -> ../../../../../share/pyshared/Bio/SeqUtils/IsoelectricPoint.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParamData.py -> ../../../../../share/pyshared/Bio/SeqUtils/ProtParamData.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/MeltingTemp.py -> ../../../../../share/pyshared/Bio/SeqUtils/MeltingTemp.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsageIndices.py -> ../../../../../share/pyshared/Bio/SeqUtils/CodonUsageIndices.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/__init__.py -> ../../../../../share/pyshared/Bio/SeqUtils/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/lcc.py -> ../../../../../share/pyshared/Bio/SeqUtils/lcc.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/ProtParam.py -> ../../../../../share/pyshared/Bio/SeqUtils/ProtParam.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CheckSum.py -> ../../../../../share/pyshared/Bio/SeqUtils/CheckSum.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqUtils/CodonUsage.py -> ../../../../../share/pyshared/Bio/SeqUtils/CodonUsage.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/General.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/General.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/__init__.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/GeneralPoint.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/GeneralPoint.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/TwoPoint.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/TwoPoint.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/Uniform.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/Uniform.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Crossover/Point.py -> ../../../../../../share/pyshared/Bio/GA/Crossover/Point.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Repair/__init__.py -> ../../../../../../share/pyshared/Bio/GA/Repair/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Repair/Stabilizing.py -> ../../../../../../share/pyshared/Bio/GA/Repair/Stabilizing.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/__init__.py -> ../../../../../share/pyshared/Bio/GA/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Organism.py -> ../../../../../share/pyshared/Bio/GA/Organism.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/RouletteWheel.py -> ../../../../../../share/pyshared/Bio/GA/Selection/RouletteWheel.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/Diversity.py -> ../../../../../../share/pyshared/Bio/GA/Selection/Diversity.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/__init__.py -> ../../../../../../share/pyshared/Bio/GA/Selection/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/Tournament.py -> ../../../../../../share/pyshared/Bio/GA/Selection/Tournament.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Selection/Abstract.py -> ../../../../../../share/pyshared/Bio/GA/Selection/Abstract.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Evolver.py -> ../../../../../share/pyshared/Bio/GA/Evolver.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Mutation/General.py -> ../../../../../../share/pyshared/Bio/GA/Mutation/General.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Mutation/__init__.py -> ../../../../../../share/pyshared/Bio/GA/Mutation/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/GA/Mutation/Simple.py -> ../../../../../../share/pyshared/Bio/GA/Mutation/Simple.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/ParserSupport.py -> ../../../../share/pyshared/Bio/ParserSupport.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/CAPS/__init__.py -> ../../../../../share/pyshared/Bio/CAPS/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SeqRecord.py -> ../../../../share/pyshared/Bio/SeqRecord.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_utils.py -> ../../../../../share/pyshared/Bio/Phylo/_utils.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NeXMLIO.py -> ../../../../../share/pyshared/Bio/Phylo/NeXMLIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXML.py -> ../../../../../share/pyshared/Bio/Phylo/PhyloXML.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/BaseTree.py -> ../../../../../share/pyshared/Bio/Phylo/BaseTree.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NeXML.py -> ../../../../../share/pyshared/Bio/Phylo/NeXML.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_codeml.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/_parse_codeml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/yn00.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/yn00.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/__init__.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_yn00.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/_parse_yn00.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/baseml.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/baseml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_parse_baseml.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/_parse_baseml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/codeml.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/codeml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/_paml.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/_paml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PAML/chi2.py -> ../../../../../../share/pyshared/Bio/Phylo/PAML/chi2.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_io.py -> ../../../../../share/pyshared/Bio/Phylo/_io.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/__init__.py -> ../../../../../share/pyshared/Bio/Phylo/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Fasttree.py -> ../../../../../../share/pyshared/Bio/Phylo/Applications/_Fasttree.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/__init__.py -> ../../../../../../share/pyshared/Bio/Phylo/Applications/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Raxml.py -> ../../../../../../share/pyshared/Bio/Phylo/Applications/_Raxml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Applications/_Phyml.py -> ../../../../../../share/pyshared/Bio/Phylo/Applications/_Phyml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/CDAO.py -> ../../../../../share/pyshared/Bio/Phylo/CDAO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/PhyloXMLIO.py -> ../../../../../share/pyshared/Bio/Phylo/PhyloXMLIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NewickIO.py -> ../../../../../share/pyshared/Bio/Phylo/NewickIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/NexusIO.py -> ../../../../../share/pyshared/Bio/Phylo/NexusIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/CDAOIO.py -> ../../../../../share/pyshared/Bio/Phylo/CDAOIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/Newick.py -> ../../../../../share/pyshared/Bio/Phylo/Newick.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Phylo/_cdao_owl.py -> ../../../../../share/pyshared/Bio/Phylo/_cdao_owl.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Geo/Record.py -> ../../../../../share/pyshared/Bio/Geo/Record.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Geo/__init__.py -> ../../../../../share/pyshared/Bio/Geo/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/MarkovModel.py -> ../../../../share/pyshared/Bio/MarkovModel.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/StockholmIO.py -> ../../../../../share/pyshared/Bio/AlignIO/StockholmIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/__init__.py -> ../../../../../share/pyshared/Bio/AlignIO/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/Interfaces.py -> ../../../../../share/pyshared/Bio/AlignIO/Interfaces.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/FastaIO.py -> ../../../../../share/pyshared/Bio/AlignIO/FastaIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/NexusIO.py -> ../../../../../share/pyshared/Bio/AlignIO/NexusIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/ClustalIO.py -> ../../../../../share/pyshared/Bio/AlignIO/ClustalIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/EmbossIO.py -> ../../../../../share/pyshared/Bio/AlignIO/EmbossIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/AlignIO/PhylipIO.py -> ../../../../../share/pyshared/Bio/AlignIO/PhylipIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/_py3k/__init__.py -> ../../../../../share/pyshared/Bio/_py3k/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/_py3k/_ordereddict.py -> ../../../../../share/pyshared/Bio/_py3k/_ordereddict.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/HotRand.py -> ../../../../share/pyshared/Bio/HotRand.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/triefind.py -> ../../../../share/pyshared/Bio/triefind.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Pathway/__init__.py -> ../../../../../share/pyshared/Bio/Pathway/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/__init__.py -> ../../../../../../share/pyshared/Bio/Pathway/Rep/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/MultiGraph.py -> ../../../../../../share/pyshared/Bio/Pathway/Rep/MultiGraph.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Pathway/Rep/Graph.py -> ../../../../../../share/pyshared/Bio/Pathway/Rep/Graph.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/Gene/Schema.py -> ../../../../../../share/pyshared/Bio/NeuralNetwork/Gene/Schema.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/Gene/__init__.py -> 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lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/BackPropagation/Network.py -> ../../../../../../share/pyshared/Bio/NeuralNetwork/BackPropagation/Network.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/__init__.py -> ../../../../../share/pyshared/Bio/NeuralNetwork/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/Training.py -> ../../../../../share/pyshared/Bio/NeuralNetwork/Training.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/NeuralNetwork/StopTraining.py -> ../../../../../share/pyshared/Bio/NeuralNetwork/StopTraining.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_utils.py -> ../../../../../share/pyshared/Bio/SearchIO/_utils.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> ../../../../../../share/pyshared/Bio/SearchIO/ExonerateIO/exonerate_cigar.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/_base.py -> ../../../../../../share/pyshared/Bio/SearchIO/ExonerateIO/_base.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py -> ../../../../../../share/pyshared/Bio/SearchIO/ExonerateIO/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py -> ../../../../../../share/pyshared/Bio/SearchIO/ExonerateIO/exonerate_text.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> ../../../../../../share/pyshared/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlatIO.py -> ../../../../../share/pyshared/Bio/SearchIO/BlatIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_index.py -> ../../../../../share/pyshared/Bio/SearchIO/_index.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/__init__.py -> ../../../../../share/pyshared/Bio/SearchIO/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_text.py -> ../../../../../../share/pyshared/Bio/SearchIO/BlastIO/blast_text.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/__init__.py -> ../../../../../../share/pyshared/Bio/SearchIO/BlastIO/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py -> ../../../../../../share/pyshared/Bio/SearchIO/BlastIO/blast_xml.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py -> ../../../../../../share/pyshared/Bio/SearchIO/BlastIO/blast_tab.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/FastaIO.py -> ../../../../../share/pyshared/Bio/SearchIO/FastaIO.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/hmmer3_tab.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/_base.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/_base.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/__init__.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/hmmer2_text.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/hmmer3_domtab.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py -> ../../../../../../share/pyshared/Bio/SearchIO/HmmerIO/hmmer3_text.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hsp.py -> ../../../../../../share/pyshared/Bio/SearchIO/_model/hsp.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/_base.py -> ../../../../../../share/pyshared/Bio/SearchIO/_model/_base.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/__init__.py -> ../../../../../../share/pyshared/Bio/SearchIO/_model/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/query.py -> ../../../../../../share/pyshared/Bio/SearchIO/_model/query.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SearchIO/_model/hit.py -> ../../../../../../share/pyshared/Bio/SearchIO/_model/hit.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/TogoWS/__init__.py -> ../../../../../share/pyshared/Bio/TogoWS/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Seq.py -> ../../../../share/pyshared/Bio/Seq.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/Medline/__init__.py -> ../../../../../share/pyshared/Bio/Medline/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/__init__.py -> ../../../../../share/pyshared/Bio/SubsMat/__init__.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/FreqTable.py -> ../../../../../share/pyshared/Bio/SubsMat/FreqTable.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/python2.7/dist-packages/Bio/SubsMat/MatrixInfo.py -> ../../../../../share/pyshared/Bio/SubsMat/MatrixInfo.py lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/trie.so -> ../../../python2.7/dist-packages/Bio/trie.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/Motif/_pwm.so -> ../../../../python2.7/dist-packages/Bio/Motif/_pwm.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/Nexus/cnexus.so -> ../../../../python2.7/dist-packages/Bio/Nexus/cnexus.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/KDTree/_CKDTree.so -> ../../../../python2.7/dist-packages/Bio/KDTree/_CKDTree.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/motifs/_pwm.so -> ../../../../python2.7/dist-packages/Bio/motifs/_pwm.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/Cluster/cluster.so -> ../../../../python2.7/dist-packages/Bio/Cluster/cluster.so lrwxrwxrwx root/root 0 2013-10-22 10:10 ./usr/lib/pyshared/python2.7/Bio/cpairwise2.so -> ../../../python2.7/dist-packages/Bio/cpairwise2.so python-biopython_1.62-1_amd64.changes: Format: 1.8 Date: Sun, 15 Sep 2013 16:36:26 +0200 Source: python-biopython Binary: python-biopython python-biopython-doc python-biopython-sql Architecture: amd64 Version: 1.62-1 Distribution: trusty-proposed Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Philipp Benner Description: python-biopython - Python library for bioinformatics python-biopython-doc - Documentation for the Biopython library python-biopython-sql - Biopython support for the BioSQL database schema Changes: python-biopython (1.62-1) unstable; urgency=low . * New upstream release * Using CDBS to build the package Checksums-Sha1: dd6737c5d81dc75dc2adae600896886606d46a36 1612684 python-biopython_1.62-1_amd64.deb Checksums-Sha256: 3f3bc47d5b3ddb99a31d9f9ea99c4ba1118339ac6b0dba4aa007b72c47bce526 1612684 python-biopython_1.62-1_amd64.deb Files: cdbf29af618129219ce12db90f81c9a8 1612684 python optional python-biopython_1.62-1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131022-1010 Build needed 00:00:21, 75608k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5141817'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5141817/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5141817'] Unmounting chroot for build PACKAGEBUILD-5141817... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5141817'] Removing build PACKAGEBUILD-5141817