libbio-featureio-perl 1.6.905-2 source package in Ubuntu
Changelog
libbio-featureio-perl (1.6.905-2) unstable; urgency=medium * Team upload * Source-only upload to allow testing migration -- Andreas Tille <email address hidden> Mon, 13 Jan 2020 09:01:02 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| libbio-featureio-perl_1.6.905-2.dsc | 2.3 KiB | d41e14604cdf747dd6944edb5c390599b22ac1efdb5db35092105b39e98891e7 |
| libbio-featureio-perl_1.6.905.orig.tar.gz | 53.6 KiB | 322e5757b374f2fb90b8f20bdbdc75631f5cb4d122f81a4d35c3a177cf950c7a |
| libbio-featureio-perl_1.6.905-2.debian.tar.xz | 2.0 KiB | bc047910dd0709363552e88f6323aaaf09be2aba7401fe943b1eba76b94a687f |
Available diffs
- diff from 1.6.905-1 to 1.6.905-2 (352 bytes)
No changes file available.
Binary packages built by this source
- libbio-featureio-perl: Modules for reading, writing, and manipulating sequence features
An I/O iterator subsystem for genomic sequence features.
.
Bio::FeatureIO is a handler module for the formats in the FeatureIO set (eg,
Bio::FeatureIO::GFF). It is the officially sanctioned way of getting at the
format objects, which most people should use.
.
The Bio::FeatureIO system can be thought of like biological file handles.
They are attached to filehandles with smart formatting rules (eg, GFF format,
or BED format) and can either read or write feature objects (Bio::SeqFeature
objects, or more correctly, Bio::FeatureHolderI implementing objects, of
which Bio::SeqFeature is one such object). If you want to know what to do
with a Bio::SeqFeatureI object, read Bio::SeqFeatureI.
.
The idea is that you request a stream object for a particular format. All the
stream objects have a notion of an internal file that is read from or written
to. A particular FeatureIO object instance is configured for either input or
output. A specific example of a stream object is the Bio::FeatureIO::gff
object.
