iva 1.0.11+ds-3 source package in Ubuntu
Changelog
iva (1.0.11+ds-3) unstable; urgency=medium * Team upload. * d/control: replace nose by pytest. (Closes: #1018382) * d/rules: fetch and run tests with pytest-3. * Set upstream metadata fields: Repository-Browse. -- Étienne Mollier <email address hidden> Fri, 02 Dec 2022 17:51:23 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Mantic | release | universe | misc | |
Lunar | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
iva_1.0.11+ds-3.dsc | 2.3 KiB | 2afe28f4da90631fe614012c0322afbc5dd9647e9816d6ade3e4cca6bb907990 |
iva_1.0.11+ds.orig.tar.xz | 8.3 MiB | 0835a11746deaa4067aeb1bc9817ed8d415f36de51ae4fc122ea5b287c5ecf1d |
iva_1.0.11+ds-3.debian.tar.xz | 5.8 KiB | 72b271624ad0750a915c0a08a6c566291778e7511540677bbffefb5da206ff01 |
Available diffs
- diff from 1.0.11+ds-2 to 1.0.11+ds-3 (713 bytes)
No changes file available.
Binary packages built by this source
- iva: iterative virus sequence assembler
IVA is a de novo assembler designed to assemble
virus genomes that have no repeat sequences,
using Illumina read pairs sequenced from mixed
populations at extremely high depth.
.
IVA's main algorithm works by iteratively extending
contigs using aligned read pairs. Its input can be
just read pairs, or additionally you can provide an
existing set of contigs to be extended. Alternatively,
it can take reads together with a reference sequence.