Ubuntu
htslib package

htslib 1.5-1 source package in Ubuntu

Changelog

htslib (1.5-1) unstable; urgency=medium

  * Team upload

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.0.0 (no changes needed)
  * do not parse d/changelog explicitly
  * hardening=+all
  * install htslib*.mk files that are used in bcftools

  [ Steffen Moeller ]
  * [upstream/metadata] Added reference to OMICtools

  [ Matthias Klumpp ]
  * libhts-dev: Depend on missing liblzma-dev
  * Wrap and sort

 -- Matthias Klumpp <email address hidden>  Thu, 03 Aug 2017 22:56:42 -0400

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
htslib_1.5-1.dsc 2.2 KiB d5ccfadd4ff9d36707ef0b3409e02e57034ccba9a343107cb4258d7a6f64a00a
htslib_1.5.orig.tar.gz 1.1 MiB 237b16c204e45c1e3a3d8b60eab2102d15b0bba81951ebd3a8a36b723a279ee0
htslib_1.5-1.debian.tar.xz 9.5 KiB 8914df76815cd356a34d6ee1416ad4a25b7b1fb8b14642566d7584b0cc7c921f

Available diffs

No changes file available.

Binary packages built by this source

htslib-test: Test data for HTSlib

 HTSlib is an implementation of a unified C library for accessing common file
 formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call
 Format), used for high-throughput sequencing data, and is the core library
 used by samtools and bcftools. HTSlib only depends on zlib. It is known to be
 compatible with gcc, g++ and clang.
 .
 HTSlib implements a generalized BAM (binary SAM) index, with file extension
 ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the
 new index and then for the old if the new index is absent.
 .
 This package contains test files and scripts for the HTSlib.

libhts-dev: No summary available for libhts-dev in ubuntu artful.

No description available for libhts-dev in ubuntu artful.

libhts2: C library for high-throughput sequencing data formats

 HTSlib is an implementation of a unified C library for accessing common file
 formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call
 Format), used for high-throughput sequencing data, and is the core library
 used by samtools and bcftools. HTSlib only depends on zlib. It is known to be
 compatible with gcc, g++ and clang.
 .
 HTSlib implements a generalized BAM (binary SAM) index, with file extension
 ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the
 new index and then for the old if the new index is absent.

libhts2-dbgsym: No summary available for libhts2-dbgsym in ubuntu artful.

No description available for libhts2-dbgsym in ubuntu artful.

tabix: No summary available for tabix in ubuntu artful.

No description available for tabix in ubuntu artful.

tabix-dbgsym: No summary available for tabix-dbgsym in ubuntu artful.

No description available for tabix-dbgsym in ubuntu artful.