https://launchpad.net/ubuntu/+source/gpp4/1.3.1-0ubuntu6/+build/14851087 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lcy01-amd64-003 4.4.0-122-generic #146-Ubuntu SMP Mon Apr 23 15:34:04 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_161 python-lpbuildd_161 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.4 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 7 May 19:56:33 ntpdate[1802]: adjust time server 10.211.37.1 offset 0.002785 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 /home/buildd/filecache-default/ccc8a783f4c9fcf0282a95411cd13cfaeeda0fbe Creating target for build PACKAGEBUILD-14851087 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 Starting target for build PACKAGEBUILD-14851087 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 'deb http://ftpmaster.internal/ubuntu cosmic main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-security main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-updates main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-14851087 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 Updating target for build PACKAGEBUILD-14851087 Get:1 http://ftpmaster.internal/ubuntu cosmic InRelease [242 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic-proposed InRelease [92.5 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main i386 Packages [1005 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main Translation-en [516 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/universe i386 Packages [8577 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/universe Translation-en [4974 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 Packages [48.8 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic-proposed/main Translation-en [28.9 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic-proposed/universe i386 Packages [213 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic-proposed/universe Translation-en [173 kB] Fetched 16.0 MB in 5s (3109 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libncursesw5 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libncurses6 libncursesw6 libtinfo6 The following packages will be upgraded: base-files base-passwd bash binutils binutils-common binutils-i686-linux-gnu bsdutils build-essential cpp cpp-7 dpkg dpkg-dev e2fslibs e2fsprogs fdisk g++ g++-7 gcc gcc-7 gcc-7-base gcc-8-base libargon2-0 libasan4 libatomic1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcilkrts5 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libfdisk1 libgcc-7-dev libgcc1 libgmp10 libgomp1 libgpg-error0 libitm1 libmount1 libmpx2 libncurses5 libncursesw5 libp11-kit0 libperl5.26 libprocps6 libquadmath0 libreadline7 libsmartcols1 libsqlite3-0 libss2 libstdc++-7-dev libstdc++6 libtinfo5 libubsan0 libusb-0.1-4 libuuid1 mount ncurses-base ncurses-bin perl perl-base perl-modules-5.26 pinentry-curses procps readline-common tzdata util-linux 69 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 46.0 MB of archives. After this operation, 1363 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu cosmic/main i386 base-files i386 10.1ubuntu3 [58.0 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic/main i386 libtinfo6 i386 6.1+20180210-2ubuntu2 [84.6 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic/main i386 bash i386 4.4.18-2ubuntu2 [645 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 bsdutils i386 1:2.31.1-0.4ubuntu4 [62.5 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 dpkg i386 1.19.0.5ubuntu3 [1162 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main i386 libext2fs2 i386 1.44.1-2 [185 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/main i386 e2fsprogs i386 1.44.1-2 [428 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/main i386 ncurses-bin i386 6.1+20180210-2ubuntu2 [166 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 perl-modules-5.26 all 5.26.2-3 [2763 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libperl5.26 i386 5.26.2-3 [3182 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 perl i386 5.26.2-3 [201 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 perl-base i386 5.26.2-3 [1495 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic/main i386 libncursesw6 i386 6.1+20180210-2ubuntu2 [141 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libuuid1 i386 2.31.1-0.4ubuntu4 [20.6 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libblkid1 i386 2.31.1-0.4ubuntu4 [139 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libfdisk1 i386 2.31.1-0.4ubuntu4 [182 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libmount1 i386 2.31.1-0.4ubuntu4 [149 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libsmartcols1 i386 2.31.1-0.4ubuntu4 [91.8 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 fdisk i386 2.31.1-0.4ubuntu4 [116 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 util-linux i386 2.31.1-0.4ubuntu4 [929 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic/main i386 base-passwd i386 3.5.45 [47.9 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main i386 ncurses-base all 6.1+20180210-2ubuntu2 [17.8 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 mount i386 2.31.1-0.4ubuntu4 [112 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main i386 libquadmath0 i386 8.1.0-1ubuntu3 [208 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main i386 libitm1 i386 8.1.0-1ubuntu3 [30.8 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main i386 gcc-8-base i386 8.1.0-1ubuntu3 [18.4 kB] Get:27 http://ftpmaster.internal/ubuntu cosmic/main i386 libstdc++6 i386 8.1.0-1ubuntu3 [430 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic/main i386 libmpx2 i386 8.1.0-1ubuntu3 [12.9 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic/main i386 libcc1-0 i386 8.1.0-1ubuntu3 [41.8 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic/main i386 libatomic1 i386 8.1.0-1ubuntu3 [9624 B] Get:31 http://ftpmaster.internal/ubuntu cosmic/main i386 libgomp1 i386 8.1.0-1ubuntu3 [80.8 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic/main i386 libgcc1 i386 1:8.1.0-1ubuntu3 [48.1 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic/main i386 libcap-ng0 i386 0.7.9-1 [11.5 kB] Get:34 http://ftpmaster.internal/ubuntu cosmic/main i386 libcom-err2 i386 1.44.1-2 [9684 B] Get:35 http://ftpmaster.internal/ubuntu cosmic/main i386 libgpg-error0 i386 1.31-1 [60.9 kB] Get:36 http://ftpmaster.internal/ubuntu cosmic/main i386 libss2 i386 1.44.1-2 [11.6 kB] Get:37 http://ftpmaster.internal/ubuntu cosmic/main i386 libncurses5 i386 6.1+20180210-2ubuntu2 [101 kB] Get:38 http://ftpmaster.internal/ubuntu cosmic/main i386 libncursesw5 i386 6.1+20180210-2ubuntu2 [128 kB] Get:39 http://ftpmaster.internal/ubuntu cosmic/main i386 libtinfo5 i386 6.1+20180210-2ubuntu2 [79.7 kB] Get:40 http://ftpmaster.internal/ubuntu cosmic/main i386 libgmp10 i386 2:6.1.2+dfsg-3 [246 kB] Get:41 http://ftpmaster.internal/ubuntu cosmic/main i386 libp11-kit0 i386 0.23.10-2 [179 kB] Get:42 http://ftpmaster.internal/ubuntu cosmic/main i386 libprocps6 i386 2:3.3.12-3ubuntu2 [32.3 kB] Get:43 http://ftpmaster.internal/ubuntu cosmic/main i386 libncurses6 i386 6.1+20180210-2ubuntu2 [108 kB] Get:44 http://ftpmaster.internal/ubuntu cosmic/main i386 procps i386 2:3.3.12-3ubuntu2 [224 kB] Get:45 http://ftpmaster.internal/ubuntu cosmic/main i386 libargon2-0 i386 0~20161029-2 [25.0 kB] Get:46 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 readline-common all 7.0-5 [52.2 kB] Get:47 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libreadline7 i386 7.0-5 [127 kB] Get:48 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libsqlite3-0 i386 3.23.1-1 [536 kB] Get:49 http://ftpmaster.internal/ubuntu cosmic/main i386 tzdata all 2018e-1 [188 kB] Get:50 http://ftpmaster.internal/ubuntu cosmic/main i386 binutils-common i386 2.30-17ubuntu1 [193 kB] Get:51 http://ftpmaster.internal/ubuntu cosmic/main i386 binutils i386 2.30-17ubuntu1 [3392 B] Get:52 http://ftpmaster.internal/ubuntu cosmic/main i386 binutils-i686-linux-gnu i386 2.30-17ubuntu1 [2028 kB] Get:53 http://ftpmaster.internal/ubuntu cosmic/main i386 libbinutils i386 2.30-17ubuntu1 [544 kB] Get:54 http://ftpmaster.internal/ubuntu cosmic/main i386 libasan4 i386 7.3.0-18ubuntu2 [361 kB] Get:55 http://ftpmaster.internal/ubuntu cosmic/main i386 libubsan0 i386 7.3.0-18ubuntu2 [141 kB] Get:56 http://ftpmaster.internal/ubuntu cosmic/main i386 libcilkrts5 i386 7.3.0-18ubuntu2 [47.3 kB] Get:57 http://ftpmaster.internal/ubuntu cosmic/main i386 g++-7 i386 7.3.0-18ubuntu2 [7813 kB] Get:58 http://ftpmaster.internal/ubuntu cosmic/main i386 gcc-7 i386 7.3.0-18ubuntu2 [7694 kB] Get:59 http://ftpmaster.internal/ubuntu cosmic/main i386 libstdc++-7-dev i386 7.3.0-18ubuntu2 [1505 kB] Get:60 http://ftpmaster.internal/ubuntu cosmic/main i386 libgcc-7-dev i386 7.3.0-18ubuntu2 [2398 kB] Get:61 http://ftpmaster.internal/ubuntu cosmic/main i386 cpp-7 i386 7.3.0-18ubuntu2 [6967 kB] Get:62 http://ftpmaster.internal/ubuntu cosmic/main i386 gcc-7-base i386 7.3.0-18ubuntu2 [19.0 kB] Get:63 http://ftpmaster.internal/ubuntu cosmic/main i386 cpp i386 4:7.3.0-3ubuntu3 [27.6 kB] Get:64 http://ftpmaster.internal/ubuntu cosmic/main i386 gcc i386 4:7.3.0-3ubuntu3 [5268 B] Get:65 http://ftpmaster.internal/ubuntu cosmic/main i386 g++ i386 4:7.3.0-3ubuntu3 [1596 B] Get:66 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 dpkg-dev all 1.19.0.5ubuntu3 [608 kB] Get:67 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libdpkg-perl all 1.19.0.5ubuntu3 [211 kB] Get:68 http://ftpmaster.internal/ubuntu cosmic/main i386 build-essential i386 12.5ubuntu2 [4728 B] Get:69 http://ftpmaster.internal/ubuntu cosmic/main i386 e2fslibs i386 1.44.1-2 [2704 B] Get:70 http://ftpmaster.internal/ubuntu cosmic/main i386 libcomerr2 i386 1.44.1-2 [2692 B] Get:71 http://ftpmaster.internal/ubuntu cosmic/main i386 libusb-0.1-4 i386 2:0.1.12-32 [17.9 kB] Get:72 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 pinentry-curses i386 1.1.0-1build1 [37.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 46.0 MB in 1s (37.5 MB/s) (Reading database ... 12632 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu3_i386.deb ... Unpacking base-files (10.1ubuntu3) over (10.1ubuntu2) ... Setting up base-files (10.1ubuntu3) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Selecting previously unselected package libtinfo6:i386. (Reading database ... 12632 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.1+20180210-2ubuntu2_i386.deb ... Unpacking libtinfo6:i386 (6.1+20180210-2ubuntu2) ... Setting up libtinfo6:i386 (6.1+20180210-2ubuntu2) ... (Reading database ... 12641 files and directories currently installed.) Preparing to unpack .../bash_4.4.18-2ubuntu2_i386.deb ... Unpacking bash (4.4.18-2ubuntu2) over (4.4.18-2ubuntu1) ... Setting up bash (4.4.18-2ubuntu2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12641 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.31.1-0.4ubuntu4_i386.deb ... Unpacking bsdutils (1:2.31.1-0.4ubuntu4) over (1:2.31.1-0.4ubuntu3) ... Setting up bsdutils (1:2.31.1-0.4ubuntu4) ... (Reading database ... 12641 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.0.5ubuntu3_i386.deb ... Unpacking dpkg (1.19.0.5ubuntu3) over (1.19.0.5ubuntu2) ... Setting up dpkg (1.19.0.5ubuntu3) ... (Reading database ... 12641 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.1-2_i386.deb ... Unpacking libext2fs2:i386 (1.44.1-2) over (1.44.1-1) ... Setting up libext2fs2:i386 (1.44.1-2) ... (Reading database ... 12641 files and directories currently installed.) 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Setting up build-essential (12.5ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-14851087 i386 cosmic-proposed -c chroot:build-PACKAGEBUILD-14851087 --arch=i386 --dist=cosmic-proposed --nolog gpp4_1.3.1-0ubuntu6.dsc Initiating build PACKAGEBUILD-14851087 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-122-generic #146-Ubuntu SMP Mon Apr 23 15:34:04 UTC 2018 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-003.buildd +==============================================================================+ | gpp4 1.3.1-0ubuntu6 (i386) 07 May 2018 19:57 | +==============================================================================+ Package: gpp4 Version: 1.3.1-0ubuntu6 Source Version: 1.3.1-0ubuntu6 Distribution: cosmic-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/gpp4-jpIdyn/gpp4-1.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/gpp4-jpIdyn' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-14851087/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gpp4_1.3.1-0ubuntu6.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-XX3m5n/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-XX3m5n/apt_archive ./ InRelease Get:2 copy:/<>/resolver-XX3m5n/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-XX3m5n/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-XX3m5n/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-XX3m5n/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (201 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-XX3m5n/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12656 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 5), autotools-dev, quilt, pkg-config, libmmdb-dev, gfortran, m4 Filtered Build-Depends: debhelper (>= 5), autotools-dev, quilt, pkg-config, libmmdb-dev, gfortran, m4 dpkg-deb: building package 'sbuild-build-depends-gpp4-dummy' in '/<>/resolver-0yOHx5/apt_archive/sbuild-build-depends-gpp4-dummy.deb'. Ign:1 copy:/<>/resolver-0yOHx5/apt_archive ./ InRelease Get:2 copy:/<>/resolver-0yOHx5/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-0yOHx5/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-0yOHx5/apt_archive ./ Sources [245 B] Get:5 copy:/<>/resolver-0yOHx5/apt_archive ./ Packages [561 B] Fetched 2925 B in 0s (266 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gpp4 build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism diffstat file gettext gettext-base gfortran gfortran-7 groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libicu60 libmagic-mgc libmagic1 libmmdb-dev libmmdb0 libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db pkg-config po-debconf quilt Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl procmail graphviz default-mta | mail-transport-agent Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl less The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism diffstat file gettext gettext-base gfortran gfortran-7 groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libicu60 libmagic-mgc libmagic1 libmmdb-dev libmmdb0 libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db pkg-config po-debconf quilt sbuild-build-depends-gpp4-dummy 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. Need to get 26.1 MB of archives. After this operation, 96.1 MB of additional disk space will be used. Get:1 copy:/<>/resolver-0yOHx5/apt_archive ./ sbuild-build-depends-gpp4-dummy 0.invalid.0 [892 B] Get:2 http://ftpmaster.internal/ubuntu cosmic/main i386 libbsd0 i386 0.8.7-1 [44.7 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic/main i386 bsdmainutils i386 11.1.2ubuntu2 [183 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic/main i386 groff-base i386 1.22.3-10 [1169 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main i386 libpipeline1 i386 1.5.0-1 [27.2 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main i386 man-db i386 2.8.3-2 [1028 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/universe i386 libmmdb0 i386 1.25.5-2 [356 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libmagic-mgc i386 1:5.33-2 [193 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libmagic1 i386 1:5.33-2 [76.6 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 file i386 1:5.33-2 [22.8 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic/main i386 libglib2.0-0 i386 2.56.1-2ubuntu1 [1232 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic/main i386 libicu60 i386 60.2-3ubuntu3 [8193 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic/main i386 libxml2 i386 2.9.4+dfsg1-6.1ubuntu1 [697 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic/main i386 gettext-base i386 0.19.8.1-6build1 [51.3 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic/main i386 libsigsegv2 i386 2.12-2 [14.2 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic/main i386 m4 i386 1.4.18-1 [196 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic/main i386 autoconf all 2.69-11 [322 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic/main i386 autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic/main i386 automake all 1:1.15.1-3ubuntu2 [509 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic/main i386 autopoint all 0.19.8.1-6build1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic-proposed/main i386 libtool all 2.4.6-2.1 [195 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main i386 dh-autoreconf all 17 [15.8 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic/main i386 libarchive-zip-perl all 1.60-1 [83.9 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main i386 libfile-stripnondeterminism-perl all 0.041-1 [15.3 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main i386 libtimedate-perl all 2.3000-2 [37.5 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main i386 dh-strip-nondeterminism all 0.041-1 [5188 B] Get:27 http://ftpmaster.internal/ubuntu cosmic/main i386 libcroco3 i386 0.6.12-2 [87.7 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic/main i386 gettext i386 0.19.8.1-6build1 [902 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic/main i386 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic/main i386 po-debconf all 1.0.20 [232 kB] Get:31 http://ftpmaster.internal/ubuntu cosmic/main i386 debhelper all 11.2.1ubuntu1 [906 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic/main i386 diffstat i386 1.61-1build1 [23.8 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic/main i386 libgfortran4 i386 7.3.0-18ubuntu2 [472 kB] Get:34 http://ftpmaster.internal/ubuntu cosmic/main i386 libgfortran-7-dev i386 7.3.0-18ubuntu2 [527 kB] Get:35 http://ftpmaster.internal/ubuntu cosmic/main i386 gfortran-7 i386 7.3.0-18ubuntu2 [7375 kB] Get:36 http://ftpmaster.internal/ubuntu cosmic/main i386 gfortran i386 4:7.3.0-3ubuntu3 [1356 B] Get:37 http://ftpmaster.internal/ubuntu cosmic/universe i386 libmmdb-dev i386 1.25.5-2 [96.3 kB] Get:38 http://ftpmaster.internal/ubuntu cosmic/main i386 pkg-config i386 0.29.1-0ubuntu2 [45.8 kB] Get:39 http://ftpmaster.internal/ubuntu cosmic/universe i386 quilt all 0.63-8.2 [293 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.1 MB in 1s (48.8 MB/s) Selecting previously unselected package libbsd0:i386. (Reading database ... 12656 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.8.7-1_i386.deb ... Unpacking libbsd0:i386 (0.8.7-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu2_i386.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.3-10_i386.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../03-libpipeline1_1.5.0-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.8.3-2_i386.deb ... Unpacking man-db (2.8.3-2) ... Selecting previously unselected package libmmdb0:i386. Preparing to unpack .../05-libmmdb0_1.25.5-2_i386.deb ... Unpacking libmmdb0:i386 (1.25.5-2) ... Selecting previously unselected package libmagic-mgc. 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Setting up libxml2:i386 (2.9.4+dfsg1-6.1ubuntu1) ... Setting up libmagic-mgc (1:5.33-2) ... Setting up libmagic1:i386 (1:5.33-2) ... Setting up libcroco3:i386 (0.6.12-2) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Setting up autotools-dev (20180224.1) ... Setting up libgfortran-7-dev:i386 (7.3.0-18ubuntu2) ... Setting up gfortran-7 (7.3.0-18ubuntu2) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up diffstat (1.61-1build1) ... Setting up autopoint (0.19.8.1-6build1) ... Setting up libmmdb0:i386 (1.25.5-2) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up gfortran (4:7.3.0-3ubuntu3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up gettext (0.19.8.1-6build1) ... Setting up libmmdb-dev (1.25.5-2) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.33-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-3ubuntu2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libtool (2.4.6-2.1) ... Setting up quilt (0.63-8.2) ... Setting up po-debconf (1.0.20) ... Setting up dh-autoreconf (17) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up debhelper (11.2.1ubuntu1) ... Setting up sbuild-build-depends-gpp4-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-122-generic amd64 (i686) Toolchain package versions: binutils_2.30-17ubuntu1 dpkg-dev_1.19.0.5ubuntu3 g++-7_7.3.0-18ubuntu2 gcc-7_7.3.0-18ubuntu2 libc6-dev_2.27-3ubuntu1 libstdc++-7-dev_7.3.0-18ubuntu2 libstdc++6_8.1.0-1ubuntu3 linux-libc-dev_4.15.0-20.21 Package versions: adduser_3.116ubuntu1 advancecomp_2.1-1 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3ubuntu2 autopoint_0.19.8.1-6build1 autotools-dev_20180224.1 base-files_10.1ubuntu3 base-passwd_3.5.45 bash_4.4.18-2ubuntu2 binutils_2.30-17ubuntu1 binutils-common_2.30-17ubuntu1 binutils-i686-linux-gnu_2.30-17ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.31.1-0.4ubuntu4 build-essential_12.5ubuntu2 bzip2_1.0.6-8.1 ca-certificates_20180409 coreutils_8.28-1ubuntu1 cpp_4:7.3.0-3ubuntu3 cpp-7_7.3.0-18ubuntu2 dash_0.5.8-2.10 debconf_1.5.66 debhelper_11.2.1ubuntu1 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffstat_1.61-1build1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu3 dpkg_1.19.0.5ubuntu3 dpkg-dev_1.19.0.5ubuntu3 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 fakeroot_1.22-2ubuntu1 fdisk_2.31.1-0.4ubuntu4 file_1:5.33-2 findutils_4.6.0+git+20170828-2 g++_4:7.3.0-3ubuntu3 g++-7_7.3.0-18ubuntu2 gcc_4:7.3.0-3ubuntu3 gcc-7_7.3.0-18ubuntu2 gcc-7-base_7.3.0-18ubuntu2 gcc-8-base_8.1.0-1ubuntu3 gettext_0.19.8.1-6build1 gettext-base_0.19.8.1-6build1 gfortran_4:7.3.0-3ubuntu3 gfortran-7_7.3.0-18ubuntu2 gpg_2.2.4-1ubuntu1 gpg-agent_2.2.4-1ubuntu1 gpgconf_2.2.4-1ubuntu1 gpgv_2.2.4-1ubuntu1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5ubuntu1 hostname_3.20 init_1.51 init-system-helpers_1.51 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu5 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-18ubuntu2 libassuan0_2.5.1-2 libatomic1_8.1.0-1ubuntu3 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.2-1ubuntu1 libaudit1_1:2.8.2-1ubuntu1 libbinutils_2.30-17ubuntu1 libblkid1_2.31.1-0.4ubuntu4 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3ubuntu1 libc-dev-bin_2.27-3ubuntu1 libc6_2.27-3ubuntu1 libc6-dev_2.27-3ubuntu1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-1ubuntu3 libcilkrts5_7.3.0-18ubuntu2 libcom-err2_1.44.1-2 libcomerr2_1.44.1-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1ubuntu1 libdb5.3_5.3.28-13.1ubuntu1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu3 libdpkg-perl_1.19.0.5ubuntu3 libext2fs2_1.44.1-2 libfakeroot_1.22-2ubuntu1 libfdisk1_2.31.1-0.4ubuntu4 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libgcc-7-dev_7.3.0-18ubuntu2 libgcc1_1:8.1.0-1ubuntu3 libgcrypt20_1.8.1-4ubuntu1 libgdbm-compat4_1.14.1-6 libgdbm5_1.14.1-6 libgfortran-7-dev_7.3.0-18ubuntu2 libgfortran4_7.3.0-18ubuntu2 libglib2.0-0_2.56.1-2ubuntu1 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1ubuntu1 libgomp1_8.1.0-1ubuntu3 libgpg-error0_1.31-1 libhogweed4_3.4-1 libicu60_60.2-3ubuntu3 libidn11_1.33-2.1ubuntu1 libidn2-0_2.0.4-1.1build2 libip4tc0_1.6.1-2ubuntu2 libisl19_0.19-1 libitm1_8.1.0-1ubuntu3 libjson-c3_0.12.1-1.3 libkmod2_24-1ubuntu3 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblz4-1_0.0~r131-2ubuntu3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmmdb-dev_1.25.5-2 libmmdb0_1.25.5-2 libmount1_2.31.1-0.4ubuntu4 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libmpx2_8.1.0-1ubuntu3 libncurses5_6.1+20180210-2ubuntu2 libncurses6_6.1+20180210-2ubuntu2 libncursesw5_6.1+20180210-2ubuntu2 libncursesw6_6.1+20180210-2ubuntu2 libnettle6_3.4-1 libnpth0_1.5-3 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre3_2:8.39-9 libperl5.26_5.26.2-3 libpipeline1_1.5.0-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3ubuntu2 libquadmath0_8.1.0-1ubuntu3 libreadline7_7.0-5 libseccomp2_2.3.1-2.1ubuntu4 libselinux1_2.7-2build2 libsemanage-common_2.7-2build2 libsemanage1_2.7-2build2 libsepol1_2.7-1 libsigsegv2_2.12-2 libslang2_2.3.1a-3ubuntu1 libsmartcols1_2.31.1-0.4ubuntu4 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssl1.1_1.1.0g-2ubuntu4 libstdc++-7-dev_7.3.0-18ubuntu2 libstdc++6_8.1.0-1ubuntu3 libsystemd0_237-3ubuntu10 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-2ubuntu2 libtinfo6_6.1+20180210-2ubuntu2 libtool_2.4.6-2.1 libubsan0_7.3.0-18ubuntu2 libudev1_237-3ubuntu10 libunistring2_0.9.9-0ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.31.1-0.4ubuntu4 libxml2_2.9.4+dfsg1-6.1ubuntu1 libzstd1_1.3.3+dfsg-2ubuntu1 linux-libc-dev_4.15.0-20.21 lockfile-progs_0.1.17build1 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1 make_4.1-9.1ubuntu1 man-db_2.8.3-2 mawk_1.3.3-17ubuntu3 mount_2.31.1-0.4ubuntu4 multiarch-support_2.27-3ubuntu1 ncurses-base_6.1+20180210-2ubuntu2 ncurses-bin_6.1+20180210-2ubuntu2 openssl_1.1.0g-2ubuntu4 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-2ubuntu1 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 pinentry-curses_1.1.0-1build1 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_138 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-3ubuntu2 quilt_0.63-8.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gpp4-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_237-3ubuntu10 systemd-sysv_237-3ubuntu10 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2018e-1 ubuntu-keyring_2018.02.28 util-linux_2.31.1-0.4ubuntu4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon May 7 19:48:37 2018 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gpp4_1.3.1-0ubuntu6.dsc dpkg-source: info: extracting gpp4 in gpp4-1.3.1 dpkg-source: info: unpacking gpp4_1.3.1.orig.tar.gz dpkg-source: info: applying gpp4_1.3.1-0ubuntu6.diff.gz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-14851087 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-14851087 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-14851087 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gpp4 dpkg-buildpackage: info: source version 1.3.1-0ubuntu6 dpkg-buildpackage: info: source distribution cosmic dpkg-source --before-build gpp4-1.3.1 dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null pop -a -R || test $? = 2 No patch removed rm -rf .pc debian/stamp-patched dh_testdir dh_testroot rm -f build-arch-stamp build-indep-stamp # Clean up after the build process. [ ! -f Makefile ] || /usr/bin/make distclean # remove the doxygen-generated tree rm -rf doc/ dh_autotools-dev_restoreconfig dh_autotools-dev_restoreconfig: Compatibility levels before 9 are deprecated (level 5 in use) dh_autotools-dev_restoreconfig: dh_autotools-dev_restoreconfig is deprecated; please see dh_autotools-dev_restoreconfig(1) for a replacement dh_autotools-dev_restoreconfig: This feature will be removed in compat 12. dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 5 in use) debian/rules build-arch QUILT_PATCHES=debian/patches \ quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch libtool_ppc64el.patch patching file config/libtool.m4 patching file configure Now at patch libtool_ppc64el.patch touch debian/stamp-patched dh_testdir dh_autotools-dev_updateconfig dh_autotools-dev_updateconfig: Compatibility levels before 9 are deprecated (level 5 in use) dh_autotools-dev_updateconfig: dh_autotools-dev_updateconfig is deprecated; please see dh_autotools-dev_updateconfig(1) for a replacement dh_autotools-dev_updateconfig: This feature will be removed in compat 12. ./configure --prefix=/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether f77 accepts -g... (cached) yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking for cos in -lm... yes checking for sin in -lm... yes checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking for sys/stat.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for mode_t... yes checking for off_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for vprintf... yes checking for _doprnt... no checking for strnlen... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for pow... yes checking for putenv... yes checking for rint... yes checking for setenv... yes checking for sqrt... yes checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strrchr... yes checking for strstr... yes checking for strlcpy... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for MMDB... yes configure: creating ./config.status config.status: creating Makefile config.status: creating gpp4.pc config.status: creating gpp4f.pc config.status: creating gpp4.spec config.status: creating gpp4.info config.status: creating Doxyfile config.status: creating src/Makefile config.status: creating src_f/Makefile config.status: creating data/Makefile config.status: creating test/Makefile config.status: creating src/ccp4_program.h config.status: executing depfiles commands config.status: executing libtool commands dh_testdir # Build the libary /usr/bin/make CFLAGS="-Wall -g -O2 -D_REENTRANT" make[1]: Entering directory '/<>' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /<>/config/missing --run aclocal-1.11 -I config /<>/config/missing: line 54: aclocal-1.11: command not found WARNING: `aclocal-1.11' is missing on your system. You should only need it if you modified `acinclude.m4' or `configure.ac'. You might want to install the `Automake' and `Perl' packages. Grab them from any GNU archive site. cd . && /bin/bash /<>/config/missing --run automake-1.11 --foreign /<>/config/missing: line 54: automake-1.11: command not found WARNING: `automake-1.11' is missing on your system. You should only need it if you modified `Makefile.am', `acinclude.m4' or `configure.ac'. You might want to install the `Automake' and `Perl' packages. Grab them from any GNU archive site. CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /<>/config/missing --run autoconf aclocal.m4:16: warning: this file was generated for autoconf 2.65. You have another version of autoconf. It may work, but is not guaranteed to. If you have problems, you may need to regenerate the build system entirely. To do so, use the procedure documented by the package, typically `autoreconf'. configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level configure.ac:18: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... config/libtool.m4:4176: _LT_LINKER_SHLIBS is expanded from... config/libtool.m4:5259: _LT_LANG_C_CONFIG is expanded from... config/libtool.m4:138: _LT_SETUP is expanded from... config/libtool.m4:67: LT_INIT is expanded from... config/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:18: the top level /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --prefix=/usr --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether f77 accepts -g... (cached) yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking for cos in -lm... yes checking for sin in -lm... yes checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking for sys/stat.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for mode_t... yes checking for off_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for vprintf... yes checking for _doprnt... no checking for strnlen... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for pow... yes checking for putenv... yes checking for rint... yes checking for setenv... yes checking for sqrt... yes checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strrchr... yes checking for strstr... yes checking for strlcpy... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for MMDB... yes configure: creating ./config.status /bin/bash ./config.status config.status: creating Makefile config.status: creating gpp4.pc config.status: creating gpp4f.pc config.status: creating gpp4.spec config.status: creating gpp4.info config.status: creating Doxyfile config.status: creating src/Makefile config.status: creating src_f/Makefile config.status: creating data/Makefile config.status: creating test/Makefile config.status: creating src/ccp4_program.h config.status: executing depfiles commands config.status: executing libtool commands Making all in src make[2]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c -o ccp4_array.lo ccp4_array.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c ccp4_array.c -fPIC -DPIC -o .libs/ccp4_array.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_array.lo -MD -MP -MF .deps/ccp4_array.Tpo -c ccp4_array.c -o ccp4_array.o >/dev/null 2>&1 mv -f .deps/ccp4_array.Tpo .deps/ccp4_array.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c -o cmap_data.lo cmap_data.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c cmap_data.c -fPIC -DPIC -o .libs/cmap_data.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_data.lo -MD -MP -MF .deps/cmap_data.Tpo -c cmap_data.c -o cmap_data.o >/dev/null 2>&1 mv -f .deps/cmap_data.Tpo .deps/cmap_data.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c -o cmtzlib.lo cmtzlib.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c cmtzlib.c -fPIC -DPIC -o .libs/cmtzlib.o cmtzlib.c: In function ‘MtzAssignHKLtoBase’: cmtzlib.c:2205:4: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for (i = 0; i < mtz->nxtal; ++i) ^~~ cmtzlib.c:2213:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ assign: ^~~~~~ cmtzlib.c: In function ‘MtzPut’: cmtzlib.c:2949:27: warning: comparison between pointer and zero character constant [-Wpointer-compare] if (batch->gonlab[0] != '\0') { ^~ cmtzlib.c:2949:10: note: did you mean to dereference the pointer? if (batch->gonlab[0] != '\0') { ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmtzlib.lo -MD -MP -MF .deps/cmtzlib.Tpo -c cmtzlib.c -o cmtzlib.o >/dev/null 2>&1 mv -f .deps/cmtzlib.Tpo .deps/cmtzlib.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c -o ccp4_general.lo ccp4_general.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -fPIC -DPIC -o .libs/ccp4_general.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -o ccp4_general.o >/dev/null 2>&1 mv -f .deps/ccp4_general.Tpo .deps/ccp4_general.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c -o cmap_header.lo cmap_header.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c cmap_header.c -fPIC -DPIC -o .libs/cmap_header.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_header.lo -MD -MP -MF .deps/cmap_header.Tpo -c cmap_header.c -o cmap_header.o >/dev/null 2>&1 mv -f .deps/cmap_header.Tpo .deps/cmap_header.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c -o csymlib.lo csymlib.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c csymlib.c -fPIC -DPIC -o .libs/csymlib.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT csymlib.lo -MD -MP -MF .deps/csymlib.Tpo -c csymlib.c -o csymlib.o >/dev/null 2>&1 mv -f .deps/csymlib.Tpo .deps/csymlib.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c -o ccp4_parser.lo ccp4_parser.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c ccp4_parser.c -fPIC -DPIC -o .libs/ccp4_parser.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_parser.lo -MD -MP -MF .deps/ccp4_parser.Tpo -c ccp4_parser.c -o ccp4_parser.o >/dev/null 2>&1 mv -f .deps/ccp4_parser.Tpo .deps/ccp4_parser.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c -o cmap_labels.lo cmap_labels.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c cmap_labels.c -fPIC -DPIC -o .libs/cmap_labels.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_labels.lo -MD -MP -MF .deps/cmap_labels.Tpo -c cmap_labels.c -o cmap_labels.o >/dev/null 2>&1 mv -f .deps/cmap_labels.Tpo .deps/cmap_labels.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c -o cvecmat.lo cvecmat.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c cvecmat.c -fPIC -DPIC -o .libs/cvecmat.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cvecmat.lo -MD -MP -MF .deps/cvecmat.Tpo -c cvecmat.c -o cvecmat.o >/dev/null 2>&1 mv -f .deps/cvecmat.Tpo .deps/cvecmat.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c -o ccp4_program.lo ccp4_program.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -fPIC -DPIC -o .libs/ccp4_program.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -o ccp4_program.o >/dev/null 2>&1 mv -f .deps/ccp4_program.Tpo .deps/ccp4_program.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c -o cmap_open.lo cmap_open.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c cmap_open.c -fPIC -DPIC -o .libs/cmap_open.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_open.lo -MD -MP -MF .deps/cmap_open.Tpo -c cmap_open.c -o cmap_open.o >/dev/null 2>&1 mv -f .deps/cmap_open.Tpo .deps/cmap_open.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c -o library_err.lo library_err.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c library_err.c -fPIC -DPIC -o .libs/library_err.o library_err.c: In function ‘CFile_Perror’: library_err.c:247:26: warning: comparison between pointer and zero character constant [-Wpointer-compare] if (msg == NULL || msg == '\0') colon = ""; ^~ library_err.c:247:22: note: did you mean to dereference the pointer? if (msg == NULL || msg == '\0') colon = ""; ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_err.lo -MD -MP -MF .deps/library_err.Tpo -c library_err.c -o library_err.o >/dev/null 2>&1 mv -f .deps/library_err.Tpo .deps/library_err.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c -o ccp4_unitcell.lo ccp4_unitcell.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c ccp4_unitcell.c -fPIC -DPIC -o .libs/ccp4_unitcell.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_unitcell.lo -MD -MP -MF .deps/ccp4_unitcell.Tpo -c ccp4_unitcell.c -o ccp4_unitcell.o >/dev/null 2>&1 mv -f .deps/ccp4_unitcell.Tpo .deps/ccp4_unitcell.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c -o cmap_skew.lo cmap_skew.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c cmap_skew.c -fPIC -DPIC -o .libs/cmap_skew.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_skew.lo -MD -MP -MF .deps/cmap_skew.Tpo -c cmap_skew.c -o cmap_skew.o >/dev/null 2>&1 mv -f .deps/cmap_skew.Tpo .deps/cmap_skew.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c -o library_file.lo library_file.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c library_file.c -fPIC -DPIC -o .libs/library_file.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_file.lo -MD -MP -MF .deps/library_file.Tpo -c library_file.c -o library_file.o >/dev/null 2>&1 mv -f .deps/library_file.Tpo .deps/library_file.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c -o cmap_accessor.lo cmap_accessor.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c cmap_accessor.c -fPIC -DPIC -o .libs/cmap_accessor.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_accessor.lo -MD -MP -MF .deps/cmap_accessor.Tpo -c cmap_accessor.c -o cmap_accessor.o >/dev/null 2>&1 mv -f .deps/cmap_accessor.Tpo .deps/cmap_accessor.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c -o cmap_stats.lo cmap_stats.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c cmap_stats.c -fPIC -DPIC -o .libs/cmap_stats.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_stats.lo -MD -MP -MF .deps/cmap_stats.Tpo -c cmap_stats.c -o cmap_stats.o >/dev/null 2>&1 mv -f .deps/cmap_stats.Tpo .deps/cmap_stats.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c -o library_utils.lo library_utils.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c library_utils.c -fPIC -DPIC -o .libs/library_utils.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT library_utils.lo -MD -MP -MF .deps/library_utils.Tpo -c library_utils.c -o library_utils.o >/dev/null 2>&1 mv -f .deps/library_utils.Tpo .deps/library_utils.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c -o cmap_close.lo cmap_close.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c cmap_close.c -fPIC -DPIC -o .libs/cmap_close.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_close.lo -MD -MP -MF .deps/cmap_close.Tpo -c cmap_close.c -o cmap_close.o >/dev/null 2>&1 mv -f .deps/cmap_close.Tpo .deps/cmap_close.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c -o cmap_symop.lo cmap_symop.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c cmap_symop.c -fPIC -DPIC -o .libs/cmap_symop.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT cmap_symop.lo -MD -MP -MF .deps/cmap_symop.Tpo -c cmap_symop.c -o cmap_symop.o >/dev/null 2>&1 mv -f .deps/cmap_symop.Tpo .deps/cmap_symop.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c -o pack_c.lo pack_c.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c pack_c.c -fPIC -DPIC -o .libs/pack_c.o pack_c.c: In function ‘pack_chunk’: pack_c.c:849:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] { for (i = nmbr, j = 0; i > 1; i /= 2, ++j); ^~~ pack_c.c:850:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ descriptor[0] = j; ^~~~~~~~~~ pack_c.c: In function ‘v2pack_chunk’: pack_c.c:905:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] { for (i = nmbr, j = 0; i > 1; i /= 2, ++j); ^~~ pack_c.c:906:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ descriptor[0] = j; ^~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT pack_c.lo -MD -MP -MF .deps/pack_c.Tpo -c pack_c.c -o pack_c.o >/dev/null 2>&1 mv -f .deps/pack_c.Tpo .deps/pack_c.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c -o gpp4_open_symop_file.lo gpp4_open_symop_file.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c gpp4_open_symop_file.c -fPIC -DPIC -o .libs/gpp4_open_symop_file.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT gpp4_open_symop_file.lo -MD -MP -MF .deps/gpp4_open_symop_file.Tpo -c gpp4_open_symop_file.c -o gpp4_open_symop_file.o >/dev/null 2>&1 mv -f .deps/gpp4_open_symop_file.Tpo .deps/gpp4_open_symop_file.Plo /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT -version-info 0:0:0 -o libgpp4.la -rpath /usr/lib ccp4_array.lo cmap_data.lo cmtzlib.lo ccp4_general.lo cmap_header.lo csymlib.lo ccp4_parser.lo cmap_labels.lo cvecmat.lo ccp4_program.lo cmap_open.lo library_err.lo ccp4_unitcell.lo cmap_skew.lo library_file.lo cmap_accessor.lo cmap_stats.lo library_utils.lo cmap_close.lo cmap_symop.lo pack_c.lo gpp4_open_symop_file.lo -lm libtool: link: gcc -shared .libs/ccp4_array.o .libs/cmap_data.o .libs/cmtzlib.o .libs/ccp4_general.o .libs/cmap_header.o .libs/csymlib.o .libs/ccp4_parser.o .libs/cmap_labels.o .libs/cvecmat.o .libs/ccp4_program.o .libs/cmap_open.o .libs/library_err.o .libs/ccp4_unitcell.o .libs/cmap_skew.o .libs/library_file.o .libs/cmap_accessor.o .libs/cmap_stats.o .libs/library_utils.o .libs/cmap_close.o .libs/cmap_symop.o .libs/pack_c.o .libs/gpp4_open_symop_file.o -lm -Wl,-soname -Wl,libgpp4.so.0 -o .libs/libgpp4.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libgpp4.so.0" && ln -s "libgpp4.so.0.0.0" "libgpp4.so.0") libtool: link: (cd ".libs" && rm -f "libgpp4.so" && ln -s "libgpp4.so.0.0.0" "libgpp4.so") libtool: link: ar cru .libs/libgpp4.a ccp4_array.o cmap_data.o cmtzlib.o ccp4_general.o cmap_header.o csymlib.o ccp4_parser.o cmap_labels.o cvecmat.o ccp4_program.o cmap_open.o library_err.o ccp4_unitcell.o cmap_skew.o library_file.o cmap_accessor.o cmap_stats.o library_utils.o cmap_close.o cmap_symop.o pack_c.o gpp4_open_symop_file.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libgpp4.a libtool: link: ( cd ".libs" && rm -f "libgpp4.la" && ln -s "../libgpp4.la" "libgpp4.la" ) make[2]: Leaving directory '/<>/src' Making all in test make[2]: Entering directory '/<>/test' gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT load_syminfo.o -MD -MP -MF .deps/load_syminfo.Tpo -c -o load_syminfo.o load_syminfo.c mv -f .deps/load_syminfo.Tpo .deps/load_syminfo.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o load_syminfo load_syminfo.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/load_syminfo load_syminfo.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT mtzhdr.o -MD -MP -MF .deps/mtzhdr.Tpo -c -o mtzhdr.o mtzhdr.c mtzhdr.c: In function ‘mtzhdrout’: mtzhdr.c:103:31: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=] sprintf (fmt, " %%-%ds", max); ^~ mtzhdr.c:103:21: note: directive argument in the range [1, 2147483647] sprintf (fmt, " %%-%ds", max); ^~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:862:0, from ../src/ccp4_sysdep.h:136, from ../src/ccp4_types.h:30, from ../src/ccp4_utils.h:30, from ../src/cmtzlib.h:106, from mtzhdr.c:24: /usr/include/i386-linux-gnu/bits/stdio2.h:33:10: note: ‘__builtin___sprintf_chk’ output between 11 and 20 bytes into a destination of size 16 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/mtzhdr.Tpo .deps/mtzhdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o mtzhdr mtzhdr.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/mtzhdr mtzhdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT checkarch.o -MD -MP -MF .deps/checkarch.Tpo -c -o checkarch.o checkarch.c mv -f .deps/checkarch.Tpo .deps/checkarch.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o checkarch checkarch.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/checkarch checkarch.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT maphdr.o -MD -MP -MF .deps/maphdr.Tpo -c -o maphdr.o maphdr.c mv -f .deps/maphdr.Tpo .deps/maphdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o maphdr maphdr.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/maphdr maphdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT mtzcols.o -MD -MP -MF .deps/mtzcols.Tpo -c -o mtzcols.o mtzcols.c mtzcols.c: In function ‘mtzhdrout’: mtzcols.c:32:9: warning: unused variable ‘s’ [-Wunused-variable] char *s; ^ mv -f .deps/mtzcols.Tpo .deps/mtzcols.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o mtzcols mtzcols.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/mtzcols mtzcols.o ../src/.libs/libgpp4.so -lm make[2]: Leaving directory '/<>/test' Making all in data make[2]: Entering directory '/<>/data' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/data' Making all in src_f make[2]: Entering directory '/<>/src_f' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c -o libgpp4f_la-ccp4_diskio_f.lo `test -f 'ccp4_diskio_f.c' || echo './'`ccp4_diskio_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_diskio_f.o ccp4_diskio_f.c: In function ‘qqinq_’: ccp4_diskio_f.c:712:42: warning: value computed is not used [-Wunused-value] for ( *istrm = 1; *istrm < MAXFILES; *istrm++) { ^~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -o libgpp4f_la-ccp4_diskio_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_diskio_f.Tpo .deps/libgpp4f_la-ccp4_diskio_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c -o libgpp4f_la-ccp4_parser_f.lo `test -f 'ccp4_parser_f.c' || echo './'`ccp4_parser_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_parser_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -o libgpp4f_la-ccp4_parser_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_parser_f.Tpo .deps/libgpp4f_la-ccp4_parser_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c -o libgpp4f_la-cmaplib_f.lo `test -f 'cmaplib_f.c' || echo './'`cmaplib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-cmaplib_f.o cmaplib_f.c: In function ‘msymop_’: cmaplib_f.c:1228:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for (k = 0; k !=4 ; k++) ^~~ cmaplib_f.c:1230:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ *nsym = 1; } ^ cmaplib_f.c: In function ‘ccp4_map_read_symm_matrix_’: cmaplib_f.c:1270:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for (k = 0; k !=4 ; k++) ^~~ cmaplib_f.c:1272:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ *nsym = 1; } ^ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -o libgpp4f_la-cmaplib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-cmaplib_f.Tpo .deps/libgpp4f_la-cmaplib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c -o libgpp4f_la-csymlib_f.lo `test -f 'csymlib_f.c' || echo './'`csymlib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-csymlib_f.o csymlib_f.c: In function ‘ccp4spg_f_equal_ops_order_’: csymlib_f.c:950:9: warning: implicit declaration of function ‘ccp4_spgrp_equal_order’; did you mean ‘ccp4_spgrp_equal’? [-Wimplicit-function-declaration] ret = ccp4_spgrp_equal_order(*msym1, op1, *msym2, op2); ^~~~~~~~~~~~~~~~~~~~~~ ccp4_spgrp_equal libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -o libgpp4f_la-csymlib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-csymlib_f.Tpo .deps/libgpp4f_la-csymlib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c -o libgpp4f_la-ccp4_general_f.lo `test -f 'ccp4_general_f.c' || echo './'`ccp4_general_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_general_f.o In file included from ccp4_general_f.c:31:0: ccp4_general_f.c: In function ‘ccpfyp_’: ccp4_general_f.c:85:23: warning: implicit declaration of function ‘outbuf_’; did you mean ‘setbuf’? [-Wimplicit-function-declaration] FORTRAN_CALL(OUTBUF,outbuf,(),(),()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:111:5: warning: implicit declaration of function ‘_gfortran_getarg_i4’; did you mean ‘_gfortran_getarg’? [-Wimplicit-function-declaration] _gfortran_getarg_i4(&i,arg,arg_len); ^~~~~~~~~~~~~~~~~~~ _gfortran_getarg In file included from ccp4_general_f.c:31:0: ccp4_general_f.c:142:29: warning: implicit declaration of function ‘ccp4h_init_’; did you mean ‘ccp4printf’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT, ccp4h_init, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c: In function ‘ccperr_’: ccp4_general_f.c:215:37: warning: implicit declaration of function ‘ccp4_fflush_stdout_’; did you mean ‘ccp4_file_status’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4_FFLUSH_STDOUT, ccp4_fflush_stdout, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:219:38: warning: implicit declaration of function ‘ccp4h_summary_beg_’ [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_BEG, ccp4h_summary_beg, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:227:38: warning: implicit declaration of function ‘ccp4h_summary_end_’; did you mean ‘ccp4_parse_end’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_END, ccp4h_summary_end, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c: In function ‘ccpvrs_’: ccp4_general_f.c:373:32: warning: implicit declaration of function ‘ccp4h_pre_beg_’; did you mean ‘ccp4_prog_vers’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_PRE_BEG, ccp4h_pre_beg, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -o libgpp4f_la-ccp4_general_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_general_f.Tpo .deps/libgpp4f_la-ccp4_general_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c -o libgpp4f_la-ccp4_unitcell_f.lo `test -f 'ccp4_unitcell_f.c' || echo './'`ccp4_unitcell_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_unitcell_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -o libgpp4f_la-ccp4_unitcell_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_unitcell_f.Tpo .deps/libgpp4f_la-ccp4_unitcell_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c -o libgpp4f_la-cmtzlib_f.lo `test -f 'cmtzlib_f.c' || echo './'`cmtzlib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-cmtzlib_f.o In file included from cmtzlib_f.c:70:0: cmtzlib_f.c: In function ‘mtzini_’: cmtzlib_f.c:151:33: warning: implicit declaration of function ‘ccp4h_init_lib_’ [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT_LIB, ccp4h_init_lib, (&ihtml,&isumm), (&ihtml,&isumm), (&ihtml,&isumm)); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ cmtzlib_f.c: In function ‘lrrefl_’: cmtzlib_f.c:1166:11: warning: variable ‘biomol’ set but not used [-Wunused-but-set-variable] int ieof,biomol,mindex; ^~~~~~ cmtzlib_f.c: In function ‘lrreff_’: cmtzlib_f.c:1200:11: warning: variable ‘biomol’ set but not used [-Wunused-but-set-variable] int ieof,biomol,mindex; ^~~~~~ cmtzlib_f.c: In function ‘lwid_’: cmtzlib_f.c:1912:2: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if (MtzXtalLookup(mtz,temp_xname) == NULL && ^~ cmtzlib_f.c:1917:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ ccp4_lwidx(mtz, temp_xname, temp_dname, temp_pname, datcell, &datwave); ^~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -o libgpp4f_la-cmtzlib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-cmtzlib_f.Tpo .deps/libgpp4f_la-cmtzlib_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c -o libgpp4f_la-library_f.lo `test -f 'library_f.c' || echo './'`library_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c library_f.c -fPIC -DPIC -o .libs/libgpp4f_la-library_f.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-library_f.lo -MD -MP -MF .deps/libgpp4f_la-library_f.Tpo -c library_f.c -o libgpp4f_la-library_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-library_f.Tpo .deps/libgpp4f_la-library_f.Plo /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o ccplib.lo ccplib.f libtool: compile: f77 -g -O2 -c ccplib.f -fPIC -o .libs/ccplib.o libtool: compile: f77 -g -O2 -c ccplib.f -o ccplib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o fftlib.lo fftlib.f libtool: compile: f77 -g -O2 -c fftlib.f -fPIC -o .libs/fftlib.o libtool: compile: f77 -g -O2 -c fftlib.f -o fftlib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o modlib.lo modlib.f libtool: compile: f77 -g -O2 -c modlib.f -fPIC -o .libs/modlib.o libtool: compile: f77 -g -O2 -c modlib.f -o modlib.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o parser.lo parser.f libtool: compile: f77 -g -O2 -c parser.f -fPIC -o .libs/parser.o libtool: compile: f77 -g -O2 -c parser.f -o parser.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o rwbrook.lo rwbrook.f libtool: compile: f77 -g -O2 -c rwbrook.f -fPIC -o .libs/rwbrook.o libtool: compile: f77 -g -O2 -c rwbrook.f -o rwbrook.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o libhtml.lo libhtml.f libtool: compile: f77 -g -O2 -c libhtml.f -fPIC -o .libs/libhtml.o libtool: compile: f77 -g -O2 -c libhtml.f -o libhtml.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o keyparse.lo keyparse.f libtool: compile: f77 -g -O2 -c keyparse.f -fPIC -o .libs/keyparse.o libtool: compile: f77 -g -O2 -c keyparse.f -o keyparse.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o unix.lo unix.f libtool: compile: f77 -g -O2 -c unix.f -fPIC -o .libs/unix.o libtool: compile: f77 -g -O2 -c unix.f -o unix.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o dna_output.lo dna_output.f libtool: compile: f77 -g -O2 -c dna_output.f -fPIC -o .libs/dna_output.o libtool: compile: f77 -g -O2 -c dna_output.f -o dna_output.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=compile f77 -g -O2 -c -o pack_f.lo pack_f.f libtool: compile: f77 -g -O2 -c pack_f.f -fPIC -o .libs/pack_f.o libtool: compile: f77 -g -O2 -c pack_f.f -o pack_f.o >/dev/null 2>&1 /bin/bash ../libtool --tag=F77 --mode=link f77 -g -O2 -version-info 0:0:0 -o libgpp4f.la -rpath /usr/lib libgpp4f_la-ccp4_diskio_f.lo libgpp4f_la-ccp4_parser_f.lo libgpp4f_la-cmaplib_f.lo libgpp4f_la-csymlib_f.lo libgpp4f_la-ccp4_general_f.lo libgpp4f_la-ccp4_unitcell_f.lo libgpp4f_la-cmtzlib_f.lo libgpp4f_la-library_f.lo ccplib.lo fftlib.lo modlib.lo parser.lo rwbrook.lo libhtml.lo keyparse.lo unix.lo dna_output.lo pack_f.lo ../src/libgpp4.la -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath -lm libtool: link: f77 -shared .libs/libgpp4f_la-ccp4_diskio_f.o .libs/libgpp4f_la-ccp4_parser_f.o .libs/libgpp4f_la-cmaplib_f.o .libs/libgpp4f_la-csymlib_f.o .libs/libgpp4f_la-ccp4_general_f.o .libs/libgpp4f_la-ccp4_unitcell_f.o .libs/libgpp4f_la-cmtzlib_f.o .libs/libgpp4f_la-library_f.o .libs/ccplib.o .libs/fftlib.o .libs/modlib.o .libs/parser.o .libs/rwbrook.o .libs/libhtml.o .libs/keyparse.o .libs/unix.o .libs/dna_output.o .libs/pack_f.o -Wl,-rpath -Wl,/<>/src/.libs ../src/.libs/libgpp4.so -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lquadmath -lm -Wl,-soname -Wl,libgpp4f.so.0 -o .libs/libgpp4f.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libgpp4f.so.0" && ln -s "libgpp4f.so.0.0.0" "libgpp4f.so.0") libtool: link: (cd ".libs" && rm -f "libgpp4f.so" && ln -s "libgpp4f.so.0.0.0" "libgpp4f.so") libtool: link: ar cru .libs/libgpp4f.a libgpp4f_la-ccp4_diskio_f.o libgpp4f_la-ccp4_parser_f.o libgpp4f_la-cmaplib_f.o libgpp4f_la-csymlib_f.o libgpp4f_la-ccp4_general_f.o libgpp4f_la-ccp4_unitcell_f.o libgpp4f_la-cmtzlib_f.o libgpp4f_la-library_f.o ccplib.o fftlib.o modlib.o parser.o rwbrook.o libhtml.o keyparse.o unix.o dna_output.o pack_f.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libgpp4f.a libtool: link: ( cd ".libs" && rm -f "libgpp4f.la" && ln -s "../libgpp4f.la" "libgpp4f.la" ) make[2]: Leaving directory '/<>/src_f' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' touch build-arch-stamp fakeroot debian/rules binary-arch dh_testdir dh_autotools-dev_updateconfig dh_autotools-dev_updateconfig: Compatibility levels before 9 are deprecated (level 5 in use) dh_autotools-dev_updateconfig: dh_autotools-dev_updateconfig is deprecated; please see dh_autotools-dev_updateconfig(1) for a replacement dh_autotools-dev_updateconfig: This feature will be removed in compat 12. ./configure --prefix=/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether f77 accepts -g... (cached) yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath checking for cos in -lm... yes checking for sin in -lm... yes checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking for sys/stat.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for mode_t... yes checking for off_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for vprintf... yes checking for _doprnt... no checking for strnlen... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for pow... yes checking for putenv... yes checking for rint... yes checking for setenv... yes checking for sqrt... yes checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strrchr... yes checking for strstr... yes checking for strlcpy... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for MMDB... yes configure: creating ./config.status config.status: creating Makefile config.status: creating gpp4.pc config.status: creating gpp4f.pc config.status: creating gpp4.spec config.status: creating gpp4.info config.status: creating Doxyfile config.status: creating src/Makefile config.status: creating src_f/Makefile config.status: creating data/Makefile config.status: creating test/Makefile config.status: creating src/ccp4_program.h config.status: executing depfiles commands config.status: executing libtool commands dh_testdir # Build the libary /usr/bin/make CFLAGS="-Wall -g -O2 -D_REENTRANT" make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c -o ccp4_general.lo ccp4_general.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -fPIC -DPIC -o .libs/ccp4_general.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_general.lo -MD -MP -MF .deps/ccp4_general.Tpo -c ccp4_general.c -o ccp4_general.o >/dev/null 2>&1 mv -f .deps/ccp4_general.Tpo .deps/ccp4_general.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c -o ccp4_program.lo ccp4_program.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -fPIC -DPIC -o .libs/ccp4_program.o libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -Wall -g -O2 -D_REENTRANT -MT ccp4_program.lo -MD -MP -MF .deps/ccp4_program.Tpo -c ccp4_program.c -o ccp4_program.o >/dev/null 2>&1 mv -f .deps/ccp4_program.Tpo .deps/ccp4_program.Plo /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT -version-info 0:0:0 -o libgpp4.la -rpath /usr/lib ccp4_array.lo cmap_data.lo cmtzlib.lo ccp4_general.lo cmap_header.lo csymlib.lo ccp4_parser.lo cmap_labels.lo cvecmat.lo ccp4_program.lo cmap_open.lo library_err.lo ccp4_unitcell.lo cmap_skew.lo library_file.lo cmap_accessor.lo cmap_stats.lo library_utils.lo cmap_close.lo cmap_symop.lo pack_c.lo gpp4_open_symop_file.lo -lm libtool: link: rm -fr .libs/libgpp4.a .libs/libgpp4.la .libs/libgpp4.lai .libs/libgpp4.so .libs/libgpp4.so.0 .libs/libgpp4.so.0.0.0 libtool: link: gcc -shared .libs/ccp4_array.o .libs/cmap_data.o .libs/cmtzlib.o .libs/ccp4_general.o .libs/cmap_header.o .libs/csymlib.o .libs/ccp4_parser.o .libs/cmap_labels.o .libs/cvecmat.o .libs/ccp4_program.o .libs/cmap_open.o .libs/library_err.o .libs/ccp4_unitcell.o .libs/cmap_skew.o .libs/library_file.o .libs/cmap_accessor.o .libs/cmap_stats.o .libs/library_utils.o .libs/cmap_close.o .libs/cmap_symop.o .libs/pack_c.o .libs/gpp4_open_symop_file.o -lm -Wl,-soname -Wl,libgpp4.so.0 -o .libs/libgpp4.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libgpp4.so.0" && ln -s "libgpp4.so.0.0.0" "libgpp4.so.0") libtool: link: (cd ".libs" && rm -f "libgpp4.so" && ln -s "libgpp4.so.0.0.0" "libgpp4.so") libtool: link: ar cru .libs/libgpp4.a ccp4_array.o cmap_data.o cmtzlib.o ccp4_general.o cmap_header.o csymlib.o ccp4_parser.o cmap_labels.o cvecmat.o ccp4_program.o cmap_open.o library_err.o ccp4_unitcell.o cmap_skew.o library_file.o cmap_accessor.o cmap_stats.o library_utils.o cmap_close.o cmap_symop.o pack_c.o gpp4_open_symop_file.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libgpp4.a libtool: link: ( cd ".libs" && rm -f "libgpp4.la" && ln -s "../libgpp4.la" "libgpp4.la" ) make[2]: Leaving directory '/<>/src' Making all in test make[2]: Entering directory '/<>/test' gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT load_syminfo.o -MD -MP -MF .deps/load_syminfo.Tpo -c -o load_syminfo.o load_syminfo.c mv -f .deps/load_syminfo.Tpo .deps/load_syminfo.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o load_syminfo load_syminfo.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/load_syminfo load_syminfo.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT mtzhdr.o -MD -MP -MF .deps/mtzhdr.Tpo -c -o mtzhdr.o mtzhdr.c mtzhdr.c: In function ‘mtzhdrout’: mtzhdr.c:103:31: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=] sprintf (fmt, " %%-%ds", max); ^~ mtzhdr.c:103:21: note: directive argument in the range [1, 2147483647] sprintf (fmt, " %%-%ds", max); ^~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:862:0, from ../src/ccp4_sysdep.h:136, from ../src/ccp4_types.h:30, from ../src/ccp4_utils.h:30, from ../src/cmtzlib.h:106, from mtzhdr.c:24: /usr/include/i386-linux-gnu/bits/stdio2.h:33:10: note: ‘__builtin___sprintf_chk’ output between 11 and 20 bytes into a destination of size 16 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/mtzhdr.Tpo .deps/mtzhdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o mtzhdr mtzhdr.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/mtzhdr mtzhdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT maphdr.o -MD -MP -MF .deps/maphdr.Tpo -c -o maphdr.o maphdr.c mv -f .deps/maphdr.Tpo .deps/maphdr.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o maphdr maphdr.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/maphdr maphdr.o ../src/.libs/libgpp4.so -lm gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I../src -Wall -g -O2 -D_REENTRANT -MT mtzcols.o -MD -MP -MF .deps/mtzcols.Tpo -c -o mtzcols.o mtzcols.c mtzcols.c: In function ‘mtzhdrout’: mtzcols.c:32:9: warning: unused variable ‘s’ [-Wunused-variable] char *s; ^ mv -f .deps/mtzcols.Tpo .deps/mtzcols.Po /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -D_REENTRANT ../src/libgpp4.la -lm -o mtzcols mtzcols.o -lm libtool: link: gcc -Wall -g -O2 -D_REENTRANT -o .libs/mtzcols mtzcols.o ../src/.libs/libgpp4.so -lm make[2]: Leaving directory '/<>/test' Making all in data make[2]: Entering directory '/<>/data' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/data' Making all in src_f make[2]: Entering directory '/<>/src_f' /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c -o libgpp4f_la-ccp4_general_f.lo `test -f 'ccp4_general_f.c' || echo './'`ccp4_general_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -fPIC -DPIC -o .libs/libgpp4f_la-ccp4_general_f.o In file included from ccp4_general_f.c:31:0: ccp4_general_f.c: In function ‘ccpfyp_’: ccp4_general_f.c:85:23: warning: implicit declaration of function ‘outbuf_’; did you mean ‘setbuf’? [-Wimplicit-function-declaration] FORTRAN_CALL(OUTBUF,outbuf,(),(),()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:111:5: warning: implicit declaration of function ‘_gfortran_getarg_i4’; did you mean ‘_gfortran_getarg’? [-Wimplicit-function-declaration] _gfortran_getarg_i4(&i,arg,arg_len); ^~~~~~~~~~~~~~~~~~~ _gfortran_getarg In file included from ccp4_general_f.c:31:0: ccp4_general_f.c:142:29: warning: implicit declaration of function ‘ccp4h_init_’; did you mean ‘ccp4printf’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT, ccp4h_init, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c: In function ‘ccperr_’: ccp4_general_f.c:215:37: warning: implicit declaration of function ‘ccp4_fflush_stdout_’; did you mean ‘ccp4_file_status’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4_FFLUSH_STDOUT, ccp4_fflush_stdout, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:219:38: warning: implicit declaration of function ‘ccp4h_summary_beg_’ [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_BEG, ccp4h_summary_beg, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c:227:38: warning: implicit declaration of function ‘ccp4h_summary_end_’; did you mean ‘ccp4_parse_end’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_END, ccp4h_summary_end, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ ccp4_general_f.c: In function ‘ccpvrs_’: ccp4_general_f.c:373:32: warning: implicit declaration of function ‘ccp4h_pre_beg_’; did you mean ‘ccp4_prog_vers’? [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_PRE_BEG, ccp4h_pre_beg, (), (), ()); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -o libgpp4f_la-ccp4_general_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-ccp4_general_f.Tpo .deps/libgpp4f_la-ccp4_general_f.Plo /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" -DPACKAGE_STRING=\"gpp4\ 1.3.1\" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c -o libgpp4f_la-cmtzlib_f.lo `test -f 'cmtzlib_f.c' || echo './'`cmtzlib_f.c libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -fPIC -DPIC -o .libs/libgpp4f_la-cmtzlib_f.o In file included from cmtzlib_f.c:70:0: cmtzlib_f.c: In function ‘mtzini_’: cmtzlib_f.c:151:33: warning: implicit declaration of function ‘ccp4h_init_lib_’ [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT_LIB, ccp4h_init_lib, (&ihtml,&isumm), (&ihtml,&isumm), (&ihtml,&isumm)); ^ ../src/ccp4_fortran.h:194:5: note: in definition of macro ‘FORTRAN_CALL’ name##_ p_sun ^~~~ cmtzlib_f.c: In function ‘lrrefl_’: cmtzlib_f.c:1166:11: warning: variable ‘biomol’ set but not used [-Wunused-but-set-variable] int ieof,biomol,mindex; ^~~~~~ cmtzlib_f.c: In function ‘lrreff_’: cmtzlib_f.c:1200:11: warning: variable ‘biomol’ set but not used [-Wunused-but-set-variable] int ieof,biomol,mindex; ^~~~~~ cmtzlib_f.c: In function ‘lwid_’: cmtzlib_f.c:1912:2: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if (MtzXtalLookup(mtz,temp_xname) == NULL && ^~ cmtzlib_f.c:1917:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ ccp4_lwidx(mtz, temp_xname, temp_dname, temp_pname, datcell, &datwave); ^~~~~~~~~~ libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.3.1\" "-DPACKAGE_STRING=\"gpp4 1.3.1\"" -DPACKAGE_BUGREPORT=\"mok@bioxray.dk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gpp4\" -DVERSION=\"1.3.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_STRNLEN=1 -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DGPP4_PREFIX=\"/usr\" -I. -I ../src -DGFORTRAN -Wall -g -O2 -D_REENTRANT -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -o libgpp4f_la-cmtzlib_f.o >/dev/null 2>&1 mv -f .deps/libgpp4f_la-cmtzlib_f.Tpo .deps/libgpp4f_la-cmtzlib_f.Plo /bin/bash ../libtool --tag=F77 --mode=link f77 -g -O2 -version-info 0:0:0 -o libgpp4f.la -rpath /usr/lib libgpp4f_la-ccp4_diskio_f.lo libgpp4f_la-ccp4_parser_f.lo libgpp4f_la-cmaplib_f.lo libgpp4f_la-csymlib_f.lo libgpp4f_la-ccp4_general_f.lo libgpp4f_la-ccp4_unitcell_f.lo libgpp4f_la-cmtzlib_f.lo libgpp4f_la-library_f.lo ccplib.lo fftlib.lo modlib.lo parser.lo rwbrook.lo libhtml.lo keyparse.lo unix.lo dna_output.lo pack_f.lo ../src/libgpp4.la -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath -lm libtool: link: rm -fr .libs/libgpp4f.a .libs/libgpp4f.la .libs/libgpp4f.lai .libs/libgpp4f.so .libs/libgpp4f.so.0 .libs/libgpp4f.so.0.0.0 libtool: link: f77 -shared .libs/libgpp4f_la-ccp4_diskio_f.o .libs/libgpp4f_la-ccp4_parser_f.o .libs/libgpp4f_la-cmaplib_f.o .libs/libgpp4f_la-csymlib_f.o .libs/libgpp4f_la-ccp4_general_f.o .libs/libgpp4f_la-ccp4_unitcell_f.o .libs/libgpp4f_la-cmtzlib_f.o .libs/libgpp4f_la-library_f.o .libs/ccplib.o .libs/fftlib.o .libs/modlib.o .libs/parser.o .libs/rwbrook.o .libs/libhtml.o .libs/keyparse.o .libs/unix.o .libs/dna_output.o .libs/pack_f.o -Wl,-rpath -Wl,/<>/src/.libs ../src/.libs/libgpp4.so -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lquadmath -lm -Wl,-soname -Wl,libgpp4f.so.0 -o .libs/libgpp4f.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libgpp4f.so.0" && ln -s "libgpp4f.so.0.0.0" "libgpp4f.so.0") libtool: link: (cd ".libs" && rm -f "libgpp4f.so" && ln -s "libgpp4f.so.0.0.0" "libgpp4f.so") libtool: link: ar cru .libs/libgpp4f.a libgpp4f_la-ccp4_diskio_f.o libgpp4f_la-ccp4_parser_f.o libgpp4f_la-cmaplib_f.o libgpp4f_la-csymlib_f.o libgpp4f_la-ccp4_general_f.o libgpp4f_la-ccp4_unitcell_f.o libgpp4f_la-cmtzlib_f.o libgpp4f_la-library_f.o ccplib.o fftlib.o modlib.o parser.o rwbrook.o libhtml.o keyparse.o unix.o dna_output.o pack_f.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libgpp4f.a libtool: link: ( cd ".libs" && rm -f "libgpp4f.la" && ln -s "../libgpp4f.la" "libgpp4f.la" ) make[2]: Leaving directory '/<>/src_f' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' touch build-arch-stamp dh_testdir dh_testroot dh_clean -k dh_clean: Compatibility levels before 9 are deprecated (level 5 in use) dh_clean: dh_clean -k is deprecated; use dh_prep instead dh_clean: This feature will be removed in compat 12. # Install the compiled library in debian/tmp tree /usr/bin/make DESTDIR=/<>/debian/tmp install make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' test -z "/usr/lib" || /bin/mkdir -p "/<>/debian/tmp/usr/lib" /bin/bash ../libtool --mode=install /usr/bin/install -c libgpp4.la '/<>/debian/tmp/usr/lib' libtool: install: /usr/bin/install -c .libs/libgpp4.so.0.0.0 /<>/debian/tmp/usr/lib/libgpp4.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib && { ln -s -f libgpp4.so.0.0.0 libgpp4.so.0 || { rm -f libgpp4.so.0 && ln -s libgpp4.so.0.0.0 libgpp4.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib && { ln -s -f libgpp4.so.0.0.0 libgpp4.so || { rm -f libgpp4.so && ln -s libgpp4.so.0.0.0 libgpp4.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpp4.lai /<>/debian/tmp/usr/lib/libgpp4.la libtool: install: /usr/bin/install -c .libs/libgpp4.a /<>/debian/tmp/usr/lib/libgpp4.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/libgpp4.a libtool: install: ranlib /<>/debian/tmp/usr/lib/libgpp4.a libtool: install: warning: remember to run `libtool --finish /usr/lib' test -z "/usr/include/gpp4/ccp4" || /bin/mkdir -p "/<>/debian/tmp/usr/include/gpp4/ccp4" /usr/bin/install -c -m 644 ccp4_array.h ccp4_unitcell.h cmap_stats.h ccp4_errno.h ccp4_utils.h cmtzlib.h ccp4_file_err.h ccp4_vars.h csymlib.h ccp4_fortran.h cmap_data.h cvecmat.h ccp4_general.h cmap_errno.h ccp4_parser.h cmap_header.h library_file.h ccp4_program.h cmap_labels.h mtzdata.h ccp4_spg.h cmaplib_f.h overview.h ccp4_sysdep.h cmaplib.h ccp4_types.h cmap_skew.h symlib.h pack_c.h '/<>/debian/tmp/usr/include/gpp4/ccp4' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in test make[2]: Entering directory '/<>/test' make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>/test' Making install in data make[2]: Entering directory '/<>/data' make[3]: Entering directory '/<>/data' make[3]: Nothing to be done for 'install-exec-am'. test -z "/usr/share/gpp4" || /bin/mkdir -p "/<>/debian/tmp/usr/share/gpp4" /usr/bin/install -c -m 644 syminfo.lib environ.def default.def '/<>/debian/tmp/usr/share/gpp4' make[3]: Leaving directory '/<>/data' make[2]: Leaving directory '/<>/data' Making install in src_f make[2]: Entering directory '/<>/src_f' make[3]: Entering directory '/<>/src_f' test -z "/usr/lib" || /bin/mkdir -p "/<>/debian/tmp/usr/lib" /bin/bash ../libtool --mode=install /usr/bin/install -c libgpp4f.la '/<>/debian/tmp/usr/lib' libtool: install: warning: relinking `libgpp4f.la' libtool: install: (cd /<>/src_f; /bin/bash /<>/libtool --tag F77 --mode=relink f77 -g -O2 -version-info 0:0:0 -o libgpp4f.la -rpath /usr/lib libgpp4f_la-ccp4_diskio_f.lo libgpp4f_la-ccp4_parser_f.lo libgpp4f_la-cmaplib_f.lo libgpp4f_la-csymlib_f.lo libgpp4f_la-ccp4_general_f.lo libgpp4f_la-ccp4_unitcell_f.lo libgpp4f_la-cmtzlib_f.lo libgpp4f_la-library_f.lo ccplib.lo fftlib.lo modlib.lo parser.lo rwbrook.lo libhtml.lo keyparse.lo unix.lo dna_output.lo pack_f.lo ../src/libgpp4.la -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lm -lquadmath -lm -inst-prefix-dir /<>/debian/tmp) libtool: relink: f77 -shared .libs/libgpp4f_la-ccp4_diskio_f.o .libs/libgpp4f_la-ccp4_parser_f.o .libs/libgpp4f_la-cmaplib_f.o .libs/libgpp4f_la-csymlib_f.o .libs/libgpp4f_la-ccp4_general_f.o .libs/libgpp4f_la-ccp4_unitcell_f.o .libs/libgpp4f_la-cmtzlib_f.o .libs/libgpp4f_la-library_f.o .libs/ccplib.o .libs/fftlib.o .libs/modlib.o .libs/parser.o .libs/rwbrook.o .libs/libhtml.o .libs/keyparse.o .libs/unix.o .libs/dna_output.o .libs/pack_f.o -L/<>/debian/tmp/usr/lib -L/usr/lib -lgpp4 -lmmdb -L/usr/lib/gcc/i686-linux-gnu/7 -L/usr/lib/gcc/i686-linux-gnu/7/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/7/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/7/../../.. -lgfortran -lquadmath -lm -Wl,-soname -Wl,libgpp4f.so.0 -o .libs/libgpp4f.so.0.0.0 libtool: install: /usr/bin/install -c .libs/libgpp4f.so.0.0.0T /<>/debian/tmp/usr/lib/libgpp4f.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib && { ln -s -f libgpp4f.so.0.0.0 libgpp4f.so.0 || { rm -f libgpp4f.so.0 && ln -s libgpp4f.so.0.0.0 libgpp4f.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib && { ln -s -f libgpp4f.so.0.0.0 libgpp4f.so || { rm -f libgpp4f.so && ln -s libgpp4f.so.0.0.0 libgpp4f.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpp4f.lai /<>/debian/tmp/usr/lib/libgpp4f.la libtool: install: /usr/bin/install -c .libs/libgpp4f.a /<>/debian/tmp/usr/lib/libgpp4f.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/libgpp4f.a libtool: install: ranlib /<>/debian/tmp/usr/lib/libgpp4f.a libtool: install: warning: remember to run `libtool --finish /usr/lib' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src_f' make[2]: Leaving directory '/<>/src_f' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. test -z "/usr/lib/pkgconfig" || /bin/mkdir -p "/<>/debian/tmp/usr/lib/pkgconfig" /usr/bin/install -c -m 644 gpp4.pc gpp4f.pc '/<>/debian/tmp/usr/lib/pkgconfig' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_install -a --sourcedir=debian/tmp dh_install: Compatibility levels before 9 are deprecated (level 5 in use) dh_testdir dh_testroot dh_strip dh_strip: Compatibility levels before 9 are deprecated (level 5 in use) dh_strip: Compatibility levels before 9 are deprecated (level 5 in use) dh_strip: Compatibility levels before 9 are deprecated (level 5 in use) Can't stat debian/libgpp4-doc: No such file or directory at /usr/bin/dh_strip line 352. dh_makeshlibs dh_makeshlibs: Compatibility levels before 9 are deprecated (level 5 in use) dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libgpp4-0/DEBIAN/symbols doesn't match completely debian/libgpp4-0.symbols --- debian/libgpp4-0.symbols (libgpp4-0_1.3.1-0ubuntu6_i386) +++ dpkg-gensymbolsGLegmS 2018-05-07 19:58:35.819745542 +0000 @@ -67,6 +67,7 @@ MtzPut@Base 1.0.4 MtzRJustPath@Base 1.0.4 MtzResLimits@Base 1.0.4 + MtzRewdInput@Base 1.3.1-0ubuntu6 MtzRrefl@Base 1.0.4 MtzSetLookup@Base 1.0.4 MtzSetPath@Base 1.0.4 dh_shlibdeps dh_shlibdeps: Compatibility levels before 9 are deprecated (level 5 in use) dh_shlibdeps: Compatibility levels before 9 are deprecated (level 5 in use) # Now call make recursively to execute the common bits /usr/bin/make -f debian/rules DH_OPTIONS=-a binary-common make[1]: Entering directory '/<>' dh_testdir dh_testroot dh_installchangelogs ChangeLog dh_installdocs dh_installdocs: Compatibility levels before 9 are deprecated (level 5 in use) dh_compress dh_compress: Compatibility levels before 9 are deprecated (level 5 in use) dh_compress: Compatibility levels before 9 are deprecated (level 5 in use) dh_compress: Compatibility levels before 9 are deprecated (level 5 in use) dh_compress: Compatibility levels before 9 are deprecated (level 5 in use) dh_fixperms dh_installdeb dh_installdeb: Compatibility levels before 9 are deprecated (level 5 in use) dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 138 INFO: pkgstriptranslations version 138 INFO: pkgstriptranslations version 138 pkgstriptranslations: processing libgpp4-dev (in debian/libgpp4-dev); do_strip: , oemstrip: pkgstriptranslations: processing libgpp4f-0-dbgsym (in debian/.debhelper/libgpp4f-0/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing libgpp4-0 (in debian/libgpp4-0); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgstripfiles: processing control file: debian/libgpp4-dev/DEBIAN/control, package libgpp4-dev, directory debian/libgpp4-dev .. removing usr/share/doc/libgpp4-dev/changelog.gz INFO: pkgstripfiles: waiting for lock (libgpp4-dev) ... pkgstripfiles: processing control file: debian/.debhelper/libgpp4f-0/dbgsym-root/DEBIAN/control, package libgpp4f-0-dbgsym, directory debian/.debhelper/libgpp4f-0/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4f-0-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4f-0-dbgsym' in 'debian/.debhelper/scratch-space/build-libgpp4f-0/libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.deb'. pkgstripfiles: processing control file: debian/libgpp4-0/DEBIAN/control, package libgpp4-0, directory debian/libgpp4-0 .. removing usr/share/doc/libgpp4-0/changelog.gz pkgstripfiles: Truncating usr/share/doc/libgpp4-0/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4-0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4-0' in '../libgpp4-0_1.3.1-0ubuntu6_i386.deb'. Renaming libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.deb to libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb INFO: pkgstriptranslations version 138 pkgstriptranslations: processing libgpp4f-dev (in debian/libgpp4f-dev); do_strip: , oemstrip: INFO: pkgstriptranslations version 138 pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgstriptranslations: processing libgpp4-0-dbgsym (in debian/.debhelper/libgpp4-0/dbgsym-root); do_strip: , oemstrip: Searching for duplicated docs in dependency libgpp4-0... symlinking changelog.Debian.gz in libgpp4-dev to file in libgpp4-0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4-dev' in '../libgpp4-dev_1.3.1-0ubuntu6_i386.deb'. pkgstripfiles: processing control file: debian/libgpp4f-dev/DEBIAN/control, package libgpp4f-dev, directory debian/libgpp4f-dev .. removing usr/share/doc/libgpp4f-dev/changelog.gz INFO: pkgstripfiles: waiting for lock (libgpp4f-dev) ... pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/libgpp4-0/dbgsym-root/DEBIAN/control, package libgpp4-0-dbgsym, directory debian/.debhelper/libgpp4-0/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4-0-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4-0-dbgsym' in 'debian/.debhelper/scratch-space/build-libgpp4-0/libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.deb'. Renaming libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.deb to libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb INFO: pkgstriptranslations version 138 pkgstriptranslations: processing libgpp4f-0 (in debian/libgpp4f-0); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libgpp4f-dev) ... pkgmaintainermangler: Not overriding Maintainer for domain ubuntu.com pkgstripfiles: processing control file: debian/libgpp4f-0/DEBIAN/control, package libgpp4f-0, directory debian/libgpp4f-0 .. removing usr/share/doc/libgpp4f-0/changelog.gz Searching for duplicated docs in dependency libgpp4-0... symlinking changelog.Debian.gz in libgpp4f-0 to file in libgpp4-0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4f-0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4f-0' in '../libgpp4f-0_1.3.1-0ubuntu6_i386.deb'. Searching for duplicated docs in dependency libgpp4-0... symlinking changelog.Debian.gz in libgpp4f-dev to file in libgpp4-0 Searching for duplicated docs in dependency libgpp4f-0... pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgpp4f-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgpp4f-dev' in '../libgpp4f-dev_1.3.1-0ubuntu6_i386.deb'. make[1]: Leaving directory '/<>' dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../gpp4_1.3.1-0ubuntu6_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build gpp4-1.3.1 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180507-1958 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gpp4_1.3.1-0ubuntu6_i386.changes: --------------------------------- Format: 1.8 Date: Mon, 07 May 2018 19:48:10 +0000 Source: gpp4 Binary: libgpp4-0 libgpp4-dev libgpp4f-0 libgpp4f-dev libgpp4-doc Architecture: i386 Version: 1.3.1-0ubuntu6 Distribution: cosmic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: libgpp4-0 - runtime library for CCP4 compatible programs libgpp4-dev - development environment for CCP4 compatible programs libgpp4-doc - doxygen generated documentation for libgpp4 libgpp4f-0 - shared library for CCP4 compatible programs libgpp4f-dev - development environment for CCP4 compatible programs Changes: gpp4 (1.3.1-0ubuntu6) cosmic; urgency=medium . * No-change rebuild for mmdb soname change. Checksums-Sha1: ba2abd5885a024a492b76f918401c4b432ddf80d 6494 gpp4_1.3.1-0ubuntu6_i386.buildinfo 2e24546d76af00a446d54d72dd61f748b65dfeea 155464 libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 604fa625e400a28ea3f763adafe0548cf9f1f984 116900 libgpp4-0_1.3.1-0ubuntu6_i386.deb ace55f529dee74fce4d4fd381a737df30dcc5079 147736 libgpp4-dev_1.3.1-0ubuntu6_i386.deb 8a9a3a85103bb37796a7c56f2cbf607037a8d54d 145028 libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 90523baeded3e243bf75e61cf13d957210b218db 113920 libgpp4f-0_1.3.1-0ubuntu6_i386.deb 60e67fc96f6a6d14a38a5ab8c11b352c55bfb25d 120648 libgpp4f-dev_1.3.1-0ubuntu6_i386.deb Checksums-Sha256: 70d53c31ef6dca35e487eb4f610b4bbcf3d261d18a41b75a3729818ee1d61b04 6494 gpp4_1.3.1-0ubuntu6_i386.buildinfo 0ab95ab80040442a8b2a06f952f052c2796546effb82dfa804eed96eaa768c4d 155464 libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 5ebb88bc7c6ad1f69f81bdd05633d4e8ce3f1b38f04a25db90fafb96bd5412f9 116900 libgpp4-0_1.3.1-0ubuntu6_i386.deb 5f68dd04485413c7cd732bc095eb40287cd5fa1c84b4ba6542e43f4814c9abb8 147736 libgpp4-dev_1.3.1-0ubuntu6_i386.deb 314621b6e9f33e6ff2f4fffe05ff85cdf469d453c38c24d364cf15572ad811fe 145028 libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 6420b87b1c86d638b9790fad705d881a9014706a0f8608c62ac1d547f9f3d2ff 113920 libgpp4f-0_1.3.1-0ubuntu6_i386.deb f3bdf4e920e3fdb059d4f6142f5a4396e7fb3700d77f522ad9065cc5bb39681b 120648 libgpp4f-dev_1.3.1-0ubuntu6_i386.deb Files: 7e4eec322690dcd8e5615cc5a3526cd7 6494 science optional gpp4_1.3.1-0ubuntu6_i386.buildinfo f7930e8f1f469c7ac02a2f010a9d1f96 155464 debug optional libgpp4-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 584718b8ec828c8e5148b89ca4fe48a1 116900 libs optional libgpp4-0_1.3.1-0ubuntu6_i386.deb 620384c8fac116c1643f4f9641a2b272 147736 libdevel optional libgpp4-dev_1.3.1-0ubuntu6_i386.deb 71078a139a406a098cfc6605d71e02a2 145028 debug optional libgpp4f-0-dbgsym_1.3.1-0ubuntu6_i386.ddeb 831c60c14a4f69d7d597061e88ec3555 113920 libs optional libgpp4f-0_1.3.1-0ubuntu6_i386.deb b16feafd9dcc7f70cfcffb3bb9fa5b07 120648 libdevel optional libgpp4f-dev_1.3.1-0ubuntu6_i386.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgpp4-0_1.3.1-0ubuntu6_i386.deb --------------------------------- new debian package, version 2.0. size 116900 bytes: control archive=3224 bytes. 883 bytes, 21 lines control 453 bytes, 7 lines md5sums 20 bytes, 1 lines shlibs 11267 bytes, 392 lines symbols 74 bytes, 2 lines triggers Package: libgpp4-0 Source: gpp4 Version: 1.3.1-0ubuntu6 Architecture: i386 Maintainer: Morten Kjeldgaard Installed-Size: 599 Depends: libc6 (>= 2.7) Section: libs Priority: optional Homepage: https://launchpad.net/gpp4 Description: runtime library for CCP4 compatible programs The goal of the ggp4 project is to provide a standalone replacement for the CCP4 library for macromolecular crystallography. The library performs a number of common tasks in standardized manner. These tasks include file opening, parsing keyworded input, and reading and writing of standard data formats for electron density maps and X-Ray diffraction data. Programs may call this library to ensure compatibility with the CCP4 program suite, as well as a similar look-and-feel. . This package provides a shared library needed to run programs that have been linked to libgpp4.so. drwxr-xr-x root/root 0 2018-05-07 19:48 ./ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/ lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/lib/libgpp4.so.0 -> libgpp4.so.0.0.0 -rw-r--r-- root/root 240256 2018-05-07 19:48 ./usr/lib/libgpp4.so.0.0.0 drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4-0/ -rw-r--r-- root/root 2493 2010-12-30 22:57 ./usr/share/doc/libgpp4-0/README -rw-r--r-- root/root 852 2018-05-07 19:48 ./usr/share/doc/libgpp4-0/changelog.Debian.gz -rw-r--r-- root/root 3328 2018-05-07 19:48 ./usr/share/doc/libgpp4-0/copyright drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/gpp4/ -rw-r--r-- root/root 3140 2018-05-07 19:48 ./usr/share/gpp4/default.def -rw-r--r-- root/root 7586 2018-05-07 19:48 ./usr/share/gpp4/environ.def -rw-r--r-- root/root 323488 2018-05-07 19:48 ./usr/share/gpp4/syminfo.lib libgpp4-dev_1.3.1-0ubuntu6_i386.deb ----------------------------------- new debian package, version 2.0. size 147736 bytes: control archive=1668 bytes. 927 bytes, 22 lines control 2170 bytes, 32 lines md5sums Package: libgpp4-dev Source: gpp4 Version: 1.3.1-0ubuntu6 Architecture: i386 Maintainer: Morten Kjeldgaard Installed-Size: 578 Depends: libgpp4-0 (= 1.3.1-0ubuntu6) Suggests: libgpp4-doc Section: libdevel Priority: optional Homepage: https://launchpad.net/gpp4 Description: development environment for CCP4 compatible programs The goal of the ggp4 project is to provide a standalone replacement for the CCP4 library for macromolecular crystallography. The library performs a number of common tasks in standardized manner. These tasks include file opening, parsing keyworded input, and reading and writing of standard data formats for electron density maps and X-Ray diffraction data. Programs may call this library to ensure compatibility with the CCP4 program suite, as well as a similar look-and-feel. . This package provides header files and library for developing free CCP4 compatible programs. drwxr-xr-x root/root 0 2018-05-07 19:48 ./ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/include/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/include/gpp4/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ -rw-r--r-- root/root 8453 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_array.h -rw-r--r-- root/root 5051 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_errno.h -rw-r--r-- root/root 1363 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_file_err.h -rw-r--r-- root/root 12400 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_fortran.h -rw-r--r-- root/root 3643 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_general.h -rw-r--r-- root/root 10224 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_parser.h -rw-r--r-- root/root 5740 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_program.h -rw-r--r-- root/root 3607 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_spg.h -rw-r--r-- root/root 7940 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_sysdep.h -rw-r--r-- root/root 3281 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_types.h -rw-r--r-- root/root 3554 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_unitcell.h -rw-r--r-- root/root 2987 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_utils.h -rw-r--r-- root/root 1732 2018-05-07 19:48 ./usr/include/gpp4/ccp4/ccp4_vars.h -rw-r--r-- root/root 1110 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_data.h -rw-r--r-- root/root 1757 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_errno.h -rw-r--r-- root/root 1196 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_header.h -rw-r--r-- root/root 1212 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_labels.h -rw-r--r-- root/root 1149 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_skew.h -rw-r--r-- root/root 1223 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmap_stats.h -rw-r--r-- root/root 8294 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmaplib.h -rw-r--r-- root/root 1245 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmaplib_f.h -rw-r--r-- root/root 40622 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cmtzlib.h -rw-r--r-- root/root 22005 2018-05-07 19:48 ./usr/include/gpp4/ccp4/csymlib.h -rw-r--r-- root/root 1489 2018-05-07 19:48 ./usr/include/gpp4/ccp4/cvecmat.h -rw-r--r-- root/root 4171 2018-05-07 19:48 ./usr/include/gpp4/ccp4/library_file.h -rw-r--r-- root/root 9241 2018-05-07 19:48 ./usr/include/gpp4/ccp4/mtzdata.h -rw-r--r-- root/root 5709 2018-05-07 19:48 ./usr/include/gpp4/ccp4/overview.h -rw-r--r-- root/root 5942 2018-05-07 19:48 ./usr/include/gpp4/ccp4/pack_c.h -rw-r--r-- root/root 59194 2018-05-07 19:48 ./usr/include/gpp4/ccp4/symlib.h drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/ -rw-r--r-- root/root 315902 2018-05-07 19:48 ./usr/lib/libgpp4.a lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/lib/libgpp4.so -> libgpp4.so.0.0.0 drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 236 2018-05-07 19:48 ./usr/lib/pkgconfig/gpp4.pc drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4-dev/ lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4-dev/changelog.Debian.gz -> ../libgpp4-0/changelog.Debian.gz -rw-r--r-- root/root 3328 2018-05-07 19:48 ./usr/share/doc/libgpp4-dev/copyright libgpp4f-0_1.3.1-0ubuntu6_i386.deb ---------------------------------- new debian package, version 2.0. size 113920 bytes: control archive=1004 bytes. 947 bytes, 21 lines control 129 bytes, 2 lines md5sums 22 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libgpp4f-0 Source: gpp4 Version: 1.3.1-0ubuntu6 Architecture: i386 Maintainer: Morten Kjeldgaard Installed-Size: 317 Depends: libc6 (>= 2.4), libgfortran4 (>= 7), libgpp4-0 (= 1.3.1-0ubuntu6), libmmdb0 Section: libs Priority: optional Homepage: https://launchpad.net/gpp4 Description: shared library for CCP4 compatible programs The goal of the ggp4 project is to provide a standalone replacement for the CCP4 library for macromolecular crystallography. The library performs a number of common tasks in standardized manner. These tasks include file opening, parsing keyworded input, and reading and writing of standard data formats for electron density maps and X-Ray diffraction data. Programs may call this library to ensure compatibility with the CCP4 program suite, as well as a similar look-and-feel. . This package provides a shared library needed to run programs that make use of libgpp4's FORTRAN API. drwxr-xr-x root/root 0 2018-05-07 19:48 ./ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/ lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/lib/libgpp4f.so.0 -> libgpp4f.so.0.0.0 -rw-r--r-- root/root 303144 2018-05-07 19:48 ./usr/lib/libgpp4f.so.0.0.0 drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4f-0/ lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4f-0/changelog.Debian.gz -> ../libgpp4-0/changelog.Debian.gz -rw-r--r-- root/root 3328 2018-05-07 19:48 ./usr/share/doc/libgpp4f-0/copyright libgpp4f-dev_1.3.1-0ubuntu6_i386.deb ------------------------------------ new debian package, version 2.0. size 120648 bytes: control archive=924 bytes. 957 bytes, 22 lines control 185 bytes, 3 lines md5sums Package: libgpp4f-dev Source: gpp4 Version: 1.3.1-0ubuntu6 Architecture: i386 Maintainer: Morten Kjeldgaard Installed-Size: 390 Depends: libgpp4-0 (= 1.3.1-0ubuntu6), libgpp4f-0 (= 1.3.1-0ubuntu6) Suggests: libgpp4-doc Section: libdevel Priority: optional Homepage: https://launchpad.net/gpp4 Description: development environment for CCP4 compatible programs The goal of the ggp4 project is to provide a standalone replacement for the CCP4 library for macromolecular crystallography. The library performs a number of common tasks in standardized manner. These tasks include file opening, parsing keyworded input, and reading and writing of standard data formats for electron density maps and X-Ray diffraction data. Programs may call this library to ensure compatibility with the CCP4 program suite, as well as a similar look-and-feel. . This package provides the FOTRAN API library for developing free CCP4 compatible programs. drwxr-xr-x root/root 0 2018-05-07 19:48 ./ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/ -rw-r--r-- root/root 378590 2018-05-07 19:48 ./usr/lib/libgpp4f.a lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/lib/libgpp4f.so -> libgpp4f.so.0.0.0 drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 260 2018-05-07 19:48 ./usr/lib/pkgconfig/gpp4f.pc drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4f-dev/ lrwxrwxrwx root/root 0 2018-05-07 19:48 ./usr/share/doc/libgpp4f-dev/changelog.Debian.gz -> ../libgpp4-0/changelog.Debian.gz -rw-r--r-- root/root 3328 2018-05-07 19:48 ./usr/share/doc/libgpp4f-dev/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 19496 Build-Time: 84 Distribution: cosmic-proposed Host Architecture: i386 Install-Time: 13 Job: gpp4_1.3.1-0ubuntu6.dsc Machine Architecture: amd64 Package: gpp4 Package-Time: 97 Source-Version: 1.3.1-0ubuntu6 Space: 19496 Status: successful Version: 1.3.1-0ubuntu6 -------------------------------------------------------------------------------- Finished at 20180507-1958 Build needed 00:01:37, 19496k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 Scanning for processes to kill in build PACKAGEBUILD-14851087 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 Stopping target for build PACKAGEBUILD-14851087 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=cosmic --arch=i386 PACKAGEBUILD-14851087 Removing build PACKAGEBUILD-14851087