Ubuntu
freecontact package

freecontact 1.0.21-3 source package in Ubuntu

Changelog

freecontact (1.0.21-3) unstable; urgency=medium


  [ Andreas Tille ]
  * debian/control:
     - cme fix dpkg-control
     - Priority: optional

  [ Laszlo Kajan ]
  * Imported changes of 1.0.21-1ubuntu1: pass --with-boost-libdir to
    configure (Closes: #738378).
  * Imported changes of 1.0.21-1ubuntu2: use dh-autoreconf instead of
    autotools-dev

 -- Laszlo Kajan <email address hidden>  Tue, 25 Feb 2014 21:37:33 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Trusty release universe misc

Downloads

File Size SHA-256 Checksum
freecontact_1.0.21-3.dsc 2.4 KiB 4c09d1811c79c2628aa035d652cc89e08c18420c3e7ca71d4e625e20b4fc284c
freecontact_1.0.21.orig.tar.xz 401.0 KiB 513c503ace70abc3cbc12d1aff616ffd9b6564a73a584efd7435b804479bd2a8
freecontact_1.0.21-3.debian.tar.xz 5.2 KiB edbe4217783308044ab16b5fea8e44664f8cd56955a1c95d4071d57b3eecd690

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Binary packages built by this source

freecontact: No summary available for freecontact in ubuntu utopic.

No description available for freecontact in ubuntu utopic.

libfreecontact-doc: No summary available for libfreecontact-doc in ubuntu utopic.

No description available for libfreecontact-doc in ubuntu utopic.

libfreecontact0: fast protein contact predictor library

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the shared library implementing freecontact.

libfreecontact0-dbg: debugging symbols for libfreecontact

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package provides the detached debug symbols for libfreecontact.

libfreecontact0-dev: fast protein contact predictor library - development files

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains files necessary for developing applications with
 libfreecontact.