Various minor improvements for the Goby project

Registered by toby schneider

1. Standardize header to include "Copyright MIT and {author list}"
2. GPL and LGPL
3. Move as many headers as possible out of *.h into *.cpp by using predeclaring classes
4, Move proto files to appropriate library
5. Make QueueManager a normal class (not singleton) so we can have several.
6. Add "QueryRate" like "QueryDestinationID"

Blueprint information

Status:
Complete
Approver:
None
Priority:
Undefined
Drafter:
None
Direction:
Needs approval
Assignee:
None
Definition:
Approved
Series goal:
Accepted for 2.0
Implementation:
Implemented
Milestone target:
milestone icon 2.0.1
Started by
toby schneider
Completed by
toby schneider

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